Eef1d (eukaryotic translation elongation factor 1 delta) - Rat Genome Database

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Gene: Eef1d (eukaryotic translation elongation factor 1 delta) Mus musculus
Analyze
Symbol: Eef1d
Name: eukaryotic translation elongation factor 1 delta
RGD ID: 1323466
MGI Page MGI
Description: Predicted to enable several functions, including RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; guanyl-nucleotide exchange factor activity; and heat shock protein binding activity. Predicted to be involved in several processes, including cellular response to heat; cellular response to ionizing radiation; and positive regulation of transcription by RNA polymerase II. Located in cytoplasm and nucleus. Is active in glutamatergic synapse. Is expressed in cerebral cortex ventricular layer and cortical plate. Orthologous to human EEF1D (eukaryotic translation elongation factor 1 delta).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1700026P12Rik; 5730529A16Rik; AL023999; EF-1-delta; elongation factor 1-delta; eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm11675   Gm12848  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391575,766,643 - 75,781,425 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1575,766,054 - 75,781,405 (-)EnsemblGRCm39 Ensembl
GRCm381575,894,796 - 75,909,784 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1575,894,205 - 75,909,556 (-)EnsemblGRCm38mm10GRCm38
MGSCv371575,725,230 - 75,739,770 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361575,722,055 - 75,736,595 (-)NCBIMGSCv36mm8
Celera1577,395,780 - 77,410,351 (-)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1535.05NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-butoxyethanol  (EXP)
3-chloropropane-1,2-diol  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acrolein  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
ammonium chloride  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
Brodifacoum  (ISO)
caffeine  (ISO)
carbon nanotube  (EXP)
chlorpyrifos  (EXP)
chromium(6+)  (EXP)
cisplatin  (EXP)
clozapine  (ISO)
coumarin  (ISO)
CU-O LINKAGE  (EXP)
cyclosporin A  (ISO)
D-glucitol  (EXP)
deoxynivalenol  (EXP)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
doxorubicin  (ISO)
elemental selenium  (ISO)
endosulfan  (ISO)
enzyme inhibitor  (ISO)
ethanol  (ISO)
fipronil  (ISO)
flutamide  (ISO)
folic acid  (EXP)
FR900359  (ISO)
gallic acid  (ISO)
gentamycin  (ISO)
gold atom  (EXP)
gold(0)  (EXP)
hydralazine  (ISO)
isobutanol  (ISO)
ivermectin  (ISO)
lead(0)  (ISO)
lead(II) chloride  (ISO)
methidathion  (EXP)
microcystin-LR  (EXP)
N-nitrosomorpholine  (ISO)
nefazodone  (ISO)
nimesulide  (ISO)
Nutlin-3  (ISO)
ochratoxin A  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
parathion  (EXP)
perfluorohexanesulfonic acid  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (EXP,ISO)
Propiverine  (ISO)
selenium atom  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
Soman  (ISO)
succimer  (EXP)
T-2 toxin  (ISO)
thapsigargin  (ISO)
thiram  (ISO)
trichloroethene  (ISO)
trimellitic anhydride  (EXP)
triphenyl phosphate  (ISO)
tungsten  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Oncogenic potential of mouse translation elongation factor-1 delta, a novel cadmium-responsive proto-oncogene. Joseph P, etal., J Biol Chem 2002 Feb 22;277(8):6131-6.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7671812   PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11752298   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:14971650  
PMID:15867431   PMID:16141072   PMID:16141073   PMID:16602821   PMID:18056256   PMID:18307411   PMID:18799693   PMID:21278135   PMID:21597468   PMID:21677750   PMID:21873635   PMID:23937658  
PMID:27746211   PMID:28378742   PMID:30196744   PMID:30333725   PMID:30457570   PMID:30595499   PMID:30713523   PMID:32325033   PMID:32554809   PMID:34321999   PMID:36114006   PMID:36417873  
PMID:37142655   PMID:38355793  


Genomics

Comparative Map Data
Eef1d
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391575,766,643 - 75,781,425 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1575,766,054 - 75,781,405 (-)EnsemblGRCm39 Ensembl
GRCm381575,894,796 - 75,909,784 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1575,894,205 - 75,909,556 (-)EnsemblGRCm38mm10GRCm38
MGSCv371575,725,230 - 75,739,770 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361575,722,055 - 75,736,595 (-)NCBIMGSCv36mm8
Celera1577,395,780 - 77,410,351 (-)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1535.05NCBI
EEF1D
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388143,579,728 - 143,597,415 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8143,579,697 - 143,599,541 (-)EnsemblGRCh38hg38GRCh38
GRCh378144,661,898 - 144,679,585 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368144,733,041 - 144,750,726 (-)NCBINCBI36Build 36hg18NCBI36
Build 348144,733,040 - 144,750,726NCBI
Celera8140,972,129 - 140,990,084 (-)NCBICelera
Cytogenetic Map8q24.3NCBI
HuRef8139,913,388 - 139,931,374 (-)NCBIHuRef
CHM1_18144,702,015 - 144,719,993 (-)NCBICHM1_1
T2T-CHM13v2.08144,729,124 - 144,746,827 (-)NCBIT2T-CHM13v2.0
Eef1d
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87109,462,645 - 109,478,021 (-)NCBIGRCr8
mRatBN7.27107,581,930 - 107,596,735 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7107,581,930 - 107,608,799 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7109,321,443 - 109,329,841 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07111,545,121 - 111,553,519 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07111,491,044 - 111,499,448 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07116,928,264 - 116,942,981 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7116,928,265 - 116,936,674 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07116,820,231 - 116,835,552 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47113,870,558 - 113,879,376 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17113,904,788 - 113,913,606 (-)NCBI
Celera7103,938,928 - 103,947,339 (-)NCBICelera
Cytogenetic Map7q34NCBI
Eef1d
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554542,284,892 - 2,299,169 (-)NCBIChiLan1.0ChiLan1.0
EEF1D
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27161,063,180 - 161,081,090 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18136,580,866 - 136,598,651 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08140,333,100 - 140,350,955 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18143,348,045 - 143,365,497 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8143,340,928 - 143,362,971 (-)Ensemblpanpan1.1panPan2
EEF1D
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11337,240,405 - 37,247,603 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1337,239,150 - 37,255,958 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1337,196,984 - 37,210,347 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01337,712,322 - 37,725,681 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1337,711,489 - 37,726,196 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11337,386,658 - 37,399,976 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01337,503,589 - 37,516,922 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01337,984,799 - 37,998,156 (-)NCBIUU_Cfam_GSD_1.0
Eef1d
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053031,112,915 - 1,127,546 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364708,538,821 - 8,553,970 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364708,538,899 - 8,553,645 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EEF1D
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4969,527 - 983,270 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14969,532 - 982,250 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.241,038,509 - 1,047,368 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EEF1D
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18137,800,115 - 137,818,264 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8137,799,428 - 137,813,120 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660392,075,527 - 2,093,549 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eef1d
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473513,154,327 - 13,173,477 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473513,148,640 - 13,165,259 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Eef1d
391 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3260
Count of miRNA genes:740
Interacting mature miRNAs:973
Transcripts:ENSMUST00000023235, ENSMUST00000055220, ENSMUST00000089680, ENSMUST00000089681, ENSMUST00000109972, ENSMUST00000109975, ENSMUST00000116440, ENSMUST00000123712, ENSMUST00000127550, ENSMUST00000129800, ENSMUST00000134222, ENSMUST00000137426, ENSMUST00000141268, ENSMUST00000141475, ENSMUST00000144614, ENSMUST00000145764, ENSMUST00000151066, ENSMUST00000154584
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301779Dpml_mdopamine loss (mouse)Not determined155100469476794493Mouse
38501067Tip3_mtuberculosis immunophenotype 3, IFN-g level (mouse)155356339689584203Mouse
1300627Sluc26_msusceptibility to lung cancer 26 (mouse)Not determined1570345653104073951Mouse
27226777Tibl8_mtibia length 8, 5 week (mouse)15692948184584201Mouse
15092079Igly6_mIgG glycosylation 6, GP6 (mouse)157410054082674156Mouse
27226773Tibl16_mtibia length 16, 10 week (mouse)15692948175871849Mouse
4142252Tailaq4_mtail length adjusted QTL 4 (mouse)Not determined348969478601286Mouse
1357703Vtbt17_mvertebral trabecular bone trait 17 (mouse)Not determined154455331378553437Mouse
13504731Cath5_mcarotid atherosclerosis 5 (mouse)155478912988789129Mouse
1558786Msq1_mMAV-1 susceptibility QTL 1 (mouse)Not determined156338964681086436Mouse
12791003Aath8_maortic arch atherosclerosis 8 (mouse)1573430144104073951Mouse
1301006Hfib1_mhepatic fibrogenesis 1 (mouse)Not determined154730633481306479Mouse
27095936Ulnl4_mulna length 4, 5 week (mouse)155676339687684201Mouse
10755515Amzn3_manatomical modifier of Zfp423 3 (mouse)154638964680389845Mouse
1301171Brm2_mbrachyury modifier 2 (mouse)Not determined156552537699525499Mouse
1301429Pcir3_mperiosteal circumference 3 (mouse)Not determined154846536282465496Mouse
1302197Bhr2_mbronchial hyperresponsiveness 2 (mouse)Not determined1564306334103425899Mouse
26884402Cvht9_mcranial vault height 9, 16 week (mouse)154216339695497881Mouse
1357756Alaa4_malopecia areata 4 (mouse)Not determined154638964680389845Mouse
1302074Bmd4_mbone mineral density 4 (mouse)Not determined1556186708103425899Mouse
1301433Rapop5_mradiation-induced apoptosis 5 (mouse)Not determined15927302279474762Mouse
26884392Humsd8_mhumerus midshaft diameter 8, 16 week (mouse)152930014676084200Mouse
26884399Humsd1_mhumerus midshaft diameter 1, 5 week (mouse)1548363396101708435Mouse
26884397Humsd5_mhumerus midshaft diameter 5, 10 week (mouse)154836339698397881Mouse
1300648Dbsty4_mdiabesity 4 (mouse)Not determined1570349271104073951Mouse
27226786Feml11_mfemur length 11, 5 week (mouse)15612948175871849Mouse
10412067Pain2_mpain 2 (mouse)Not determined155164533985645626Mouse
4141952W3q7_mweight 3 weeks QTL 7 (mouse)Not determined348969478601286Mouse
26884442Sklq6_mskull length QTL 6, 5 week (mouse)156129481100797881Mouse
27226717Tibw4_mtibia width 4, proximal, 10 week (mouse)15612948178684200Mouse
1357526Hyplip2_mhyperlipidemia 2 (mouse)Not determined1512402203102896555Mouse
4142198Hbtq_mhabituation QTL (mouse)Not determined155116070885160833Mouse
1357407Pfat4_mpredicted fat percentage 4 (mouse)8.6Body fat amountpredicted fat percentage155711700591117153Mouse
4142448Tailq6_mtail length QTL 6 (mouse)Not determined348969478601286Mouse
1357659Epfpq4_mepididymal fat percentage QTL 4 (mouse)Not determined15348969478601286Mouse
25671381Hrsq3_mhost response to SARS QTL 3, eosinophilia (mouse)157214453975844833Mouse
26884425Cvht2_mcranial vault height 2, 5 week (mouse)1528800146102008435Mouse
1301568Tria2_mT-cell receptor induced activation 2 (mouse)Not determined154485914178859281Mouse
1302080Szs13_mseizure susceptibility 13 (mouse)Not determined155168583285694449Mouse
1300800Ses3_msalmonella enteritidis susceptibility 3 (mouse)Not determined155711700591117153Mouse
10045637Heal27_mwound healing/regeneration 29 (mouse)Not determined155141836185418511Mouse
1558985Eae32_mexperimental allergic encephalomyelitis susceptibility 32 (mouse)Not determined1532578416103425899Mouse
4141921Pstc3_mperiosteal circumference 3 (mouse)Not determined1567270698101270847Mouse
1301708Cocrb14_mcocaine related behavior 14 (mouse)Not determined155180651585806651Mouse
12880420V25Dq8_mvitamin D inactive form serum level QTL 8 (mouse)156158420095584200Mouse
27095932Ulnl11_mulna length 11, 16 week (mouse)15612948176384200Mouse
1302002Cocia2_mcocaine induced activation 2 (mouse)Not determined157237245979899178Mouse
14747011Mancz13_mmandible centroid size 13 (mouse)1572382669104073951Mouse
1357559Scfq2_msubcutaneous fat pad weight QTL 2 (mouse)Not determined15348969478601286Mouse
1300726Pitm4_mprion incubation time 4 (mouse)Not determined1570349271104073951Mouse
1301119Drb7_mdopamine receptor binding 7 (mouse)Not determined156533657899341028Mouse
4141135Cia35_mcollagen induced arthritis 35 (mouse)Not determined156481182698811946Mouse
27226734Tibmd5_mtibia midshaft diameter 5, 10 week (mouse)15612948186684201Mouse
13442492Mecth2_mmechanosensation threshold 2 (mouse)157466284979387201Mouse
1301601Faq9_mfluctuating asymmetry QTL 9 (mouse)Not determined156316390397163995Mouse
1301472Pain1_mpain 1 (mouse)Not determined157532084690813185Mouse
27226729Tibmd2_mtibia midshaft diameter 2, 5 week (mouse)153800024486684201Mouse
1301860Gct3_mgranulosa cell tumorigenesis 3 (mouse)Not determined154740959681409691Mouse
27226721Tibw8_mtibia width 8, proximal, 16 week (mouse)15692948175871849Mouse
1300844Emo2_memotionality 2 (mouse)Not determined157237245976794493Mouse

Markers in Region
AA589397  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811111,276,266 - 111,276,484UniSTSGRCm38
GRCm384115,652,804 - 115,653,035UniSTSGRCm38
MGSCv374115,325,409 - 115,325,640UniSTSGRCm37
MGSCv3711111,137,580 - 111,137,798UniSTSGRCm37
Celera11123,026,630 - 123,026,848UniSTS
Celera4114,388,818 - 114,389,049UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map4D1UniSTS
Whitehead/MRC_RH111493.8UniSTS
RH129024  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811111,276,831 - 111,276,980UniSTSGRCm38
GRCm381575,895,504 - 75,895,793UniSTSGRCm38
MGSCv3711111,138,145 - 111,138,294UniSTSGRCm37
MGSCv371575,725,934 - 75,726,223UniSTSGRCm37
Celera11123,027,195 - 123,027,344UniSTS
Celera1577,396,484 - 77,396,773UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map15E1UniSTS
RH125453  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811111,276,080 - 111,276,203UniSTSGRCm38
MGSCv3711111,137,394 - 111,137,517UniSTSGRCm37
Celera11123,026,444 - 123,026,567UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map11E2UniSTS
BF412712  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381575,903,271 - 75,903,459UniSTSGRCm38
MGSCv371575,733,701 - 75,733,889UniSTSGRCm37
Celera1577,404,282 - 77,404,470UniSTS
Cytogenetic Map15E1UniSTS


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001285429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001285430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001285431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001285432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001285433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001285434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001411966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001411967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001411968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001411969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001411970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_023240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_029663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036159543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036159544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC116520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF304351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK006403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC082536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ177630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY035199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY104511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY154960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV062370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000023235   ⟹   ENSMUSP00000023235
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,767,653 - 75,781,178 (-)Ensembl
GRCm38.p6 Ensembl1575,895,804 - 75,909,329 (-)Ensembl
Ensembl Acc Id: ENSMUST00000055220
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,769,955 - 75,781,168 (-)Ensembl
GRCm38.p6 Ensembl1575,898,106 - 75,909,319 (-)Ensembl
Ensembl Acc Id: ENSMUST00000089680   ⟹   ENSMUSP00000087109
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,767,339 - 75,781,168 (-)Ensembl
GRCm38.p6 Ensembl1575,895,490 - 75,909,319 (-)Ensembl
Ensembl Acc Id: ENSMUST00000089681   ⟹   ENSMUSP00000087110
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,767,339 - 75,781,184 (-)Ensembl
GRCm38.p6 Ensembl1575,895,490 - 75,909,335 (-)Ensembl
Ensembl Acc Id: ENSMUST00000109972   ⟹   ENSMUSP00000105599
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,766,649 - 75,781,183 (-)Ensembl
GRCm38.p6 Ensembl1575,894,800 - 75,909,334 (-)Ensembl
Ensembl Acc Id: ENSMUST00000109975   ⟹   ENSMUSP00000105602
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,766,649 - 75,781,189 (-)Ensembl
GRCm38.p6 Ensembl1575,894,800 - 75,909,340 (-)Ensembl
Ensembl Acc Id: ENSMUST00000116440   ⟹   ENSMUSP00000112141
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,767,337 - 75,781,146 (-)Ensembl
GRCm38.p6 Ensembl1575,895,488 - 75,909,297 (-)Ensembl
Ensembl Acc Id: ENSMUST00000123712   ⟹   ENSMUSP00000122155
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,768,243 - 75,781,396 (-)Ensembl
GRCm38.p6 Ensembl1575,896,394 - 75,909,547 (-)Ensembl
Ensembl Acc Id: ENSMUST00000127550   ⟹   ENSMUSP00000120735
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,775,111 - 75,777,212 (-)Ensembl
GRCm38.p6 Ensembl1575,903,262 - 75,905,363 (-)Ensembl
Ensembl Acc Id: ENSMUST00000129800
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,768,525 - 75,773,104 (-)Ensembl
GRCm38.p6 Ensembl1575,896,676 - 75,901,255 (-)Ensembl
Ensembl Acc Id: ENSMUST00000134222
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,767,341 - 75,768,589 (-)Ensembl
GRCm38.p6 Ensembl1575,895,492 - 75,896,740 (-)Ensembl
Ensembl Acc Id: ENSMUST00000137426   ⟹   ENSMUSP00000114753
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,767,337 - 75,775,405 (-)Ensembl
GRCm38.p6 Ensembl1575,895,488 - 75,903,556 (-)Ensembl
Ensembl Acc Id: ENSMUST00000141268   ⟹   ENSMUSP00000115553
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,768,130 - 75,781,168 (-)Ensembl
GRCm38.p6 Ensembl1575,896,281 - 75,909,319 (-)Ensembl
Ensembl Acc Id: ENSMUST00000141475   ⟹   ENSMUSP00000123388
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,774,972 - 75,781,396 (-)Ensembl
GRCm38.p6 Ensembl1575,903,123 - 75,909,547 (-)Ensembl
Ensembl Acc Id: ENSMUST00000144614   ⟹   ENSMUSP00000123005
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,768,123 - 75,781,405 (-)Ensembl
GRCm38.p6 Ensembl1575,896,274 - 75,909,556 (-)Ensembl
Ensembl Acc Id: ENSMUST00000145764   ⟹   ENSMUSP00000117782
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,775,355 - 75,781,140 (-)Ensembl
GRCm38.p6 Ensembl1575,903,506 - 75,909,291 (-)Ensembl
Ensembl Acc Id: ENSMUST00000151066   ⟹   ENSMUSP00000118889
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,767,337 - 75,781,155 (-)Ensembl
GRCm38.p6 Ensembl1575,895,488 - 75,909,306 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154584   ⟹   ENSMUSP00000116360
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1575,766,054 - 75,781,204 (-)Ensembl
GRCm38.p6 Ensembl1575,894,205 - 75,909,355 (-)Ensembl
RefSeq Acc Id: NM_001285429   ⟹   NP_001272358
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,766,643 - 75,781,398 (-)NCBI
GRCm381575,894,796 - 75,909,556 (-)NCBI
Celera1577,395,776 - 77,410,567 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001285430   ⟹   NP_001272359
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,766,643 - 75,781,155 (-)NCBI
GRCm381575,894,796 - 75,909,344 (-)NCBI
Celera1577,395,776 - 77,410,567 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001285431   ⟹   NP_001272360
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,766,643 - 75,781,398 (-)NCBI
GRCm381575,894,796 - 75,909,556 (-)NCBI
Celera1577,395,776 - 77,410,567 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001285432   ⟹   NP_001272361
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,766,643 - 75,781,155 (-)NCBI
GRCm381575,894,796 - 75,909,344 (-)NCBI
Celera1577,395,776 - 77,410,567 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001285433   ⟹   NP_001272362
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,766,643 - 75,781,155 (-)NCBI
GRCm381575,894,796 - 75,909,344 (-)NCBI
Celera1577,395,776 - 77,410,567 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001285434   ⟹   NP_001272363
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,766,643 - 75,781,155 (-)NCBI
GRCm381575,894,796 - 75,909,344 (-)NCBI
Celera1577,395,776 - 77,410,567 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001411966   ⟹   NP_001398895
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,766,643 - 75,781,398 (-)NCBI
RefSeq Acc Id: NM_001411967   ⟹   NP_001398896
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,766,643 - 75,781,155 (-)NCBI
RefSeq Acc Id: NM_001411968   ⟹   NP_001398897
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,766,643 - 75,781,155 (-)NCBI
RefSeq Acc Id: NM_001411969   ⟹   NP_001398898
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,766,643 - 75,781,398 (-)NCBI
RefSeq Acc Id: NM_001411970   ⟹   NP_001398899
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,766,643 - 75,781,398 (-)NCBI
RefSeq Acc Id: NM_023240   ⟹   NP_075729
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,766,643 - 75,781,155 (-)NCBI
GRCm381575,894,796 - 75,909,344 (-)NCBI
MGSCv371575,725,230 - 75,739,770 (-)RGD
Celera1577,395,776 - 77,410,567 (-)NCBI
cM Map15 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_029663   ⟹   NP_083939
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,766,643 - 75,781,155 (-)NCBI
GRCm381575,894,796 - 75,909,344 (-)NCBI
MGSCv371575,725,230 - 75,739,770 (-)RGD
Celera1577,395,776 - 77,410,567 (-)NCBI
cM Map15 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006521261   ⟹   XP_006521324
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,767,337 - 75,781,190 (-)NCBI
GRCm381575,895,488 - 75,909,341 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006521262   ⟹   XP_006521325
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,767,337 - 75,781,190 (-)NCBI
GRCm381575,895,488 - 75,909,338 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006521264   ⟹   XP_006521327
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,767,337 - 75,781,189 (-)NCBI
GRCm381575,895,488 - 75,909,338 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006521265   ⟹   XP_006521328
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,767,337 - 75,781,190 (-)NCBI
GRCm381575,895,488 - 75,909,338 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006521266   ⟹   XP_006521329
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,767,337 - 75,777,207 (-)NCBI
GRCm381575,895,488 - 75,905,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006521267   ⟹   XP_006521330
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,767,337 - 75,781,425 (-)NCBI
GRCm381575,895,488 - 75,909,576 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036159543   ⟹   XP_036015436
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,767,337 - 75,781,187 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036159544   ⟹   XP_036015437
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391575,767,337 - 75,781,398 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001272358 (Get FASTA)   NCBI Sequence Viewer  
  NP_001272359 (Get FASTA)   NCBI Sequence Viewer  
  NP_001272360 (Get FASTA)   NCBI Sequence Viewer  
  NP_001272361 (Get FASTA)   NCBI Sequence Viewer  
  NP_001272362 (Get FASTA)   NCBI Sequence Viewer  
  NP_001272363 (Get FASTA)   NCBI Sequence Viewer  
  NP_001398895 (Get FASTA)   NCBI Sequence Viewer  
  NP_001398896 (Get FASTA)   NCBI Sequence Viewer  
  NP_001398897 (Get FASTA)   NCBI Sequence Viewer  
  NP_001398898 (Get FASTA)   NCBI Sequence Viewer  
  NP_001398899 (Get FASTA)   NCBI Sequence Viewer  
  NP_075729 (Get FASTA)   NCBI Sequence Viewer  
  NP_083939 (Get FASTA)   NCBI Sequence Viewer  
  XP_006521324 (Get FASTA)   NCBI Sequence Viewer  
  XP_006521325 (Get FASTA)   NCBI Sequence Viewer  
  XP_006521327 (Get FASTA)   NCBI Sequence Viewer  
  XP_006521328 (Get FASTA)   NCBI Sequence Viewer  
  XP_006521329 (Get FASTA)   NCBI Sequence Viewer  
  XP_006521330 (Get FASTA)   NCBI Sequence Viewer  
  XP_036015436 (Get FASTA)   NCBI Sequence Viewer  
  XP_036015437 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAG17466 (Get FASTA)   NCBI Sequence Viewer  
  AAH13059 (Get FASTA)   NCBI Sequence Viewer  
  AAH79855 (Get FASTA)   NCBI Sequence Viewer  
  BAB24571 (Get FASTA)   NCBI Sequence Viewer  
  BAB26870 (Get FASTA)   NCBI Sequence Viewer  
  BAB30841 (Get FASTA)   NCBI Sequence Viewer  
  BAC32149 (Get FASTA)   NCBI Sequence Viewer  
  BAC35736 (Get FASTA)   NCBI Sequence Viewer  
  EDL29495 (Get FASTA)   NCBI Sequence Viewer  
  EDL29496 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000023235
  ENSMUSP00000023235.7
  ENSMUSP00000087109
  ENSMUSP00000087109.4
  ENSMUSP00000087110
  ENSMUSP00000087110.6
  ENSMUSP00000105599
  ENSMUSP00000105599.3
  ENSMUSP00000112141
  ENSMUSP00000112141.3
  ENSMUSP00000114753
  ENSMUSP00000114753.2
  ENSMUSP00000115553.2
  ENSMUSP00000116360
  ENSMUSP00000116360.2
  ENSMUSP00000117782.2
  ENSMUSP00000118889.2
  ENSMUSP00000120735.2
  ENSMUSP00000122155.2
  ENSMUSP00000123005.2
  ENSMUSP00000123388.2
GenBank Protein P57776 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_075729   ⟸   NM_023240
- Peptide Label: isoform b
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot),   Q80T06 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_083939   ⟸   NM_029663
- Peptide Label: isoform a
- UniProtKB: A0A0R4J1E2 (UniProtKB/TrEMBL),   F6ZFU0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001272360   ⟸   NM_001285431
- Peptide Label: isoform c
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot),   A0A0R4J1L2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001272358   ⟸   NM_001285429
- Peptide Label: isoform b
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot),   Q80T06 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001272362   ⟸   NM_001285433
- Peptide Label: isoform c
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot),   A0A0R4J1L2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001272363   ⟸   NM_001285434
- Peptide Label: isoform d
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot),   Q91VK2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001272359   ⟸   NM_001285430
- Peptide Label: isoform b
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot),   Q80T06 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001272361   ⟸   NM_001285432
- Peptide Label: isoform c
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot),   A0A0R4J1L2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006521330   ⟸   XM_006521267
- Peptide Label: isoform X1
- UniProtKB: F6ZFU0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006521327   ⟸   XM_006521264
- Peptide Label: isoform X3
- UniProtKB: F6ZFU0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006521325   ⟸   XM_006521262
- Peptide Label: isoform X2
- UniProtKB: F6ZFU0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006521328   ⟸   XM_006521265
- Peptide Label: isoform X4
- UniProtKB: F6ZFU0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006521324   ⟸   XM_006521261
- Peptide Label: isoform X1
- UniProtKB: F6ZFU0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006521329   ⟸   XM_006521266
- Peptide Label: isoform X1
- UniProtKB: F6ZFU0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000123005   ⟸   ENSMUST00000144614
Ensembl Acc Id: ENSMUSP00000120735   ⟸   ENSMUST00000127550
Ensembl Acc Id: ENSMUSP00000117782   ⟸   ENSMUST00000145764
Ensembl Acc Id: ENSMUSP00000118889   ⟸   ENSMUST00000151066
Ensembl Acc Id: ENSMUSP00000105599   ⟸   ENSMUST00000109972
Ensembl Acc Id: ENSMUSP00000105602   ⟸   ENSMUST00000109975
Ensembl Acc Id: ENSMUSP00000116360   ⟸   ENSMUST00000154584
Ensembl Acc Id: ENSMUSP00000087109   ⟸   ENSMUST00000089680
Ensembl Acc Id: ENSMUSP00000087110   ⟸   ENSMUST00000089681
Ensembl Acc Id: ENSMUSP00000114753   ⟸   ENSMUST00000137426
Ensembl Acc Id: ENSMUSP00000122155   ⟸   ENSMUST00000123712
Ensembl Acc Id: ENSMUSP00000023235   ⟸   ENSMUST00000023235
Ensembl Acc Id: ENSMUSP00000115553   ⟸   ENSMUST00000141268
Ensembl Acc Id: ENSMUSP00000123388   ⟸   ENSMUST00000141475
Ensembl Acc Id: ENSMUSP00000112141   ⟸   ENSMUST00000116440
RefSeq Acc Id: XP_036015437   ⟸   XM_036159544
- Peptide Label: isoform X5
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_036015436   ⟸   XM_036159543
- Peptide Label: isoform X5
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001398898   ⟸   NM_001411969
- Peptide Label: isoform c
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot),   A0A0R4J1L2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001398899   ⟸   NM_001411970
- Peptide Label: isoform b
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot),   Q80T06 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001398895   ⟸   NM_001411966
- Peptide Label: isoform e
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001398897   ⟸   NM_001411968
- Peptide Label: isoform e
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001398896   ⟸   NM_001411967
- Peptide Label: isoform e
- UniProtKB: Q9CYJ5 (UniProtKB/Swiss-Prot),   Q9CYD4 (UniProtKB/Swiss-Prot),   Q9CWY1 (UniProtKB/Swiss-Prot),   Q9CWW2 (UniProtKB/Swiss-Prot),   Q68FG5 (UniProtKB/Swiss-Prot),   P57776 (UniProtKB/Swiss-Prot)
Protein Domains
Elongation factor 1 beta central acidic region   Translation elongation factor EF1B beta/delta

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P57776-F1-model_v2 AlphaFold P57776 1-281 view protein structure

Promoters
RGD ID:6825946
Promoter ID:MM_KWN:18814
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung,   Spleen
Transcripts:OTTMUST00000047358
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361575,727,646 - 75,728,146 (-)MPROMDB
RGD ID:6825947
Promoter ID:MM_KWN:18816
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Spleen
Transcripts:ENSMUST00000109975,   OTTMUST00000084806
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361575,733,204 - 75,733,704 (-)MPROMDB
RGD ID:6826564
Promoter ID:MM_KWN:18818
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000050151,   ENSMUST00000109972,   ENSMUST00000109976,   NM_029663,   NM_178646,   NM_178646_TIGD5,   OTTMUST00000047338,   OTTMUST00000047344,   OTTMUST00000047345,   OTTMUST00000047356,   OTTMUST00000047357,   OTTMUST00000084818,   OTTMUST00000084819,   OTTMUST00000084820,   UC007WHL.1,   UC007WHM.1,   UC007WHN.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361575,738,821 - 75,745,347 (+)MPROMDB
RGD ID:8684032
Promoter ID:EPDNEW_M20047
Type:multiple initiation site
Name:Eef1d_2
Description:Mus musculus eukaryotic translation elongation factor 1 delta, transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M20048  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381575,905,355 - 75,905,415EPDNEW
RGD ID:8684034
Promoter ID:EPDNEW_M20048
Type:initiation region
Name:Eef1d_1
Description:Mus musculus eukaryotic translation elongation factor 1 delta, transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M20047  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381575,909,306 - 75,909,366EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1913906 AgrOrtholog
Ensembl Genes ENSMUSG00000055762 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000023235 ENTREZGENE
  ENSMUST00000023235.13 UniProtKB/TrEMBL
  ENSMUST00000089680 ENTREZGENE
  ENSMUST00000089680.10 UniProtKB/TrEMBL
  ENSMUST00000089681 ENTREZGENE
  ENSMUST00000089681.12 UniProtKB/TrEMBL
  ENSMUST00000109972 ENTREZGENE
  ENSMUST00000109972.9 UniProtKB/TrEMBL
  ENSMUST00000116440 ENTREZGENE
  ENSMUST00000116440.9 UniProtKB/TrEMBL
  ENSMUST00000123712.8 UniProtKB/TrEMBL
  ENSMUST00000127550.2 UniProtKB/TrEMBL
  ENSMUST00000137426 ENTREZGENE
  ENSMUST00000137426.8 UniProtKB/TrEMBL
  ENSMUST00000141268.8 UniProtKB/TrEMBL
  ENSMUST00000141475.2 UniProtKB/TrEMBL
  ENSMUST00000144614.8 UniProtKB/TrEMBL
  ENSMUST00000145764.2 UniProtKB/TrEMBL
  ENSMUST00000151066.8 UniProtKB/TrEMBL
  ENSMUST00000154584 ENTREZGENE
  ENSMUST00000154584.9 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.60 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro eEF-1beta-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF-1_beta_acid_region_euk UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF1B_bsu/dsu UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF1B_bsu/dsu_GNE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transl_elong_EF1B/ribosomal_S6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transl_elong_EF1B_B/D_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:66656 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1913906 ENTREZGENE
NCBI Gene 66656 ENTREZGENE
PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ELONGATION FACTOR 1-DELTA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam EF-1_beta_acid UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF1_GNE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Eef1d PhenoGen
PROSITE EF1BD_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF1BD_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART EF-1_beta_acid UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF1_GNE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54984 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0R4J1E2 ENTREZGENE, UniProtKB/TrEMBL
  A0A0R4J1L2 ENTREZGENE, UniProtKB/TrEMBL
  D3YUQ9_MOUSE UniProtKB/TrEMBL
  D3YY68_MOUSE UniProtKB/TrEMBL
  D3YZT9_MOUSE UniProtKB/TrEMBL
  D3Z356_MOUSE UniProtKB/TrEMBL
  D3Z7N2_MOUSE UniProtKB/TrEMBL
  E9PUM6_MOUSE UniProtKB/TrEMBL
  E9QN08_MOUSE UniProtKB/TrEMBL
  EF1D_MOUSE UniProtKB/Swiss-Prot
  F6ZFU0 ENTREZGENE, UniProtKB/TrEMBL
  P57776 ENTREZGENE
  Q68FG5 ENTREZGENE
  Q80T06 ENTREZGENE, UniProtKB/TrEMBL
  Q8BW50_MOUSE UniProtKB/TrEMBL
  Q91VK2 ENTREZGENE, UniProtKB/TrEMBL
  Q9CVV2_MOUSE UniProtKB/TrEMBL
  Q9CWW2 ENTREZGENE
  Q9CWY1 ENTREZGENE
  Q9CYD4 ENTREZGENE
  Q9CYJ5 ENTREZGENE
UniProt Secondary Q68FG5 UniProtKB/Swiss-Prot
  Q9CWW2 UniProtKB/Swiss-Prot
  Q9CWY1 UniProtKB/Swiss-Prot
  Q9CYD4 UniProtKB/Swiss-Prot
  Q9CYJ5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-07-04 Eef1d  eukaryotic translation elongation factor 1 delta  Eef1d  eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)  Symbol and/or name change 5135510 APPROVED