Gmds (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 13 | 32,003,566 - 32,522,744 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 13 | 32,003,562 - 32,522,723 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 13 | 31,819,583 - 32,338,762 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 13 | 31,819,579 - 32,338,740 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 13 | 31,911,455 - 32,430,413 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 13 | 31,827,051 - 32,346,009 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 13 | 32,029,445 - 32,552,254 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | A3.2 | NCBI | | | | |
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GMDS (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 6 | 1,623,806 - 2,245,605 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p13 Ensembl | 6 | 1,623,806 - 2,245,605 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 1,624,041 - 2,245,839 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 1,569,040 - 2,190,845 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 1,569,040 - 2,190,845 | NCBI | | | | | Celera | 6 | 2,852,269 - 3,473,926 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | p25.3 | NCBI | | | | | HuRef | 6 | 1,493,473 - 2,117,107 (-) | NCBI | | HuRef | | | CHM1_1 | 6 | 1,625,952 - 2,247,981 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 1,486,810 - 2,109,239 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Gmds (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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mRatBN7.2 | 17 | 32,095,315 - 32,621,975 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 17 | 32,095,386 - 32,621,961 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 17 | 31,943,309 - 32,469,749 (+) | NCBI | Rnor_SHR | | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 17 | 33,547,114 - 34,073,564 (+) | NCBI | Rnor_SHRSP | | | | UTH_Rnor_WKY_Bbb_1.0 | 17 | 31,939,117 - 32,465,571 (+) | NCBI | Rnor_WKY | | | | Rnor_6.0 | 17 | 33,408,722 - 33,938,086 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 17 | 33,408,722 - 33,938,085 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 17 | 35,298,853 - 35,824,292 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 17 | 38,461,733 - 39,016,771 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 17 | 31,657,264 - 32,181,220 (+) | NCBI | | Celera | | | Cytogenetic Map | 17 | p12 | NCBI | | | | |
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Gmds (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955465 | 11,145,837 - 11,563,352 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955465 | 11,133,513 - 11,562,562 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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GMDS (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1 | 6 | 12,234,431 - 12,866,878 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 1,443,129 - 2,071,856 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 1,559,444 - 2,178,324 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 1,556,227 - 2,178,330 (-) | Ensembl | panpan1.1 | | panPan2 | |
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GMDS (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 35 | 2,108,459 - 2,519,902 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 35 | 2,151,528 - 2,519,513 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 35 | 2,079,228 - 2,654,331 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 35 | 2,025,524 - 2,554,965 (-) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 35 | 2,000,500 - 2,575,207 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 35 | 2,021,716 - 2,596,616 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 35 | 3,357,422 - 3,932,361 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Gmds (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404946 | 23,253,265 - 23,867,993 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936633 | 2,752,443 - 3,367,443 (-) | Ensembl | SpeTri2.0 | | | | SpeTri2.0 | NW_004936633 | 2,752,677 - 3,367,408 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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GMDS (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 752,592 - 1,285,550 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 849,088 - 1,285,563 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 1,047,471 - 1,386,586 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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GMDS (Chlorocebus sabaeus - green monkey) |
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Gmds (Heterocephalus glaber - naked mole-rat) |
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