Frmd8 (FERM domain containing 8) - Rat Genome Database

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Gene: Frmd8 (FERM domain containing 8) Mus musculus
Analyze
Symbol: Frmd8
Name: FERM domain containing 8
RGD ID: 1321161
MGI Page MGI
Description: Acts upstream of or within protein localization to plasma membrane. Predicted to be located in centriolar satellite; cytosol; and nucleoplasm. Predicted to be active in plasma membrane. Is expressed in several structures, including forelimb bud; otic capsule; and skeleton. Orthologous to several human genes including FRMD8 (FERM domain containing 8).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1200004M23Rik; 2310035N23Rik; 4931429L16Rik; AU018809; FERM domain-containing protein 8; i; iTAP
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39195,901,002 - 5,925,297 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl195,899,730 - 5,925,302 (-)EnsemblGRCm39 Ensembl
GRCm38195,850,974 - 5,875,269 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl195,849,702 - 5,875,274 (-)EnsemblGRCm38mm10GRCm38
MGSCv37195,850,974 - 5,875,208 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36195,850,974 - 5,875,208 (-)NCBIMGSCv36mm8
Celera195,721,028 - 5,745,270 (-)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
centriolar satellite  (IEA,ISO)
cytoplasm  (ISO)
cytosol  (ISO,ISS)
nucleoplasm  (IEA,ISO)
nucleus  (ISO)
plasma membrane  (IBA,ISO,ISS)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:15782199   PMID:16141072   PMID:16141073   PMID:18799693   PMID:21267068  
PMID:21677750   PMID:21873635   PMID:26238476   PMID:29776906   PMID:29897333   PMID:29897336   PMID:36720499   PMID:37527040  


Genomics

Comparative Map Data
Frmd8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39195,901,002 - 5,925,297 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl195,899,730 - 5,925,302 (-)EnsemblGRCm39 Ensembl
GRCm38195,850,974 - 5,875,269 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl195,849,702 - 5,875,274 (-)EnsemblGRCm38mm10GRCm38
MGSCv37195,850,974 - 5,875,208 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36195,850,974 - 5,875,208 (-)NCBIMGSCv36mm8
Celera195,721,028 - 5,745,270 (-)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.34NCBI
FRMD8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381165,368,026 - 65,413,525 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1165,386,621 - 65,413,525 (+)EnsemblGRCh38hg38GRCh38
GRCh371165,154,108 - 65,180,996 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361164,910,617 - 64,937,572 (+)NCBINCBI36Build 36hg18NCBI36
Celera1162,480,396 - 62,507,341 (+)NCBICelera
Cytogenetic Map11q13.1NCBI
HuRef1161,480,989 - 61,508,193 (+)NCBIHuRef
CHM1_11165,038,043 - 65,064,995 (+)NCBICHM1_1
T2T-CHM13v2.01165,361,332 - 65,419,838 (+)NCBIT2T-CHM13v2.0
Frmd8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81212,572,534 - 212,593,181 (-)NCBIGRCr8
mRatBN7.21203,143,216 - 203,163,868 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1203,143,218 - 203,163,870 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1211,496,825 - 211,517,393 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01218,588,603 - 218,609,221 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01211,279,653 - 211,300,266 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01221,213,312 - 221,233,967 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1221,213,312 - 221,233,962 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01228,146,286 - 228,166,933 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41208,489,337 - 208,509,947 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11208,642,790 - 208,663,400 (-)NCBI
Celera1200,678,507 - 200,699,117 (-)NCBICelera
Cytogenetic Map1q43NCBI
Frmd8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542219,828,177 - 19,848,758 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542219,830,211 - 19,848,653 (-)NCBIChiLan1.0ChiLan1.0
FRMD8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2966,620,949 - 66,648,180 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11167,663,629 - 67,690,845 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01160,750,470 - 60,777,690 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11164,086,746 - 64,114,373 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1164,087,206 - 64,114,367 (+)Ensemblpanpan1.1panPan2
FRMD8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11851,782,664 - 51,807,343 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1851,784,413 - 51,806,874 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1850,390,215 - 50,414,893 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01852,823,568 - 52,848,669 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1852,823,570 - 52,848,549 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11851,919,273 - 51,944,359 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01851,492,361 - 51,517,441 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01852,287,703 - 52,311,673 (-)NCBIUU_Cfam_GSD_1.0
Frmd8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049477,576,834 - 7,591,007 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365994,014,355 - 4,032,866 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365994,019,651 - 4,033,352 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FRMD8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl26,822,967 - 6,843,470 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.126,822,964 - 6,843,941 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.225,955,716 - 5,976,840 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FRMD8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.118,824,966 - 8,853,292 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl18,827,122 - 8,852,792 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038106,124,108 - 106,150,187 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Frmd8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476720,983,658 - 21,002,673 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476720,983,658 - 21,003,522 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Frmd8
695 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2151
Count of miRNA genes:810
Interacting mature miRNAs:1061
Transcripts:ENSMUST00000025728, ENSMUST00000133729, ENSMUST00000145026, ENSMUST00000155227
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142302Nstr1_mnerve sheath tumor resistance QTL 1 (mouse)Not determined19122371338Mouse
1301271Datd_mdopamine transporter density (mouse)Not determined19132340234Mouse
1300923Bits4_mbitterness sensitivity 4 (mouse)Not determined19332321637323348Mouse
11039522Tbbr4_mTrypanosoma brucei brucei response 4 (mouse)19531332639313470Mouse
25394536Skmw86_mskeletal muscle weight 86, TA (mouse)1950648178957825Mouse
4142161Drinksac2_mdrink saccharin 2 (mouse)Not determined120695286Mouse
1357819Tgct2_mtesticular germ cell tumor 2 (mouse)Not determined19332855120539663Mouse
4142406Pbctlp1_mperipheral blood cytotoxic T lymphocyte percentage 1 (mouse)Not determined132875174Mouse
1301800Faq10_mfluctuating asymmetry QTL 10 (mouse)Not determined19332321637323348Mouse
1300776Lfp3_mlong free running period 3 (mouse)Not determined19120328703Mouse
1300904Chab5_mcholesterol absorption 5 (mouse)Not determined19165376435653927Mouse
26884385Skwq14_mskull length QTL 14, 16 week (mouse)19325000035877400Mouse
1300591Pas3_mpulmonary adenoma susceptibility 3 (mouse)Not determined19332321637323348Mouse
1302126Skull26_mskull morphology 26 (mouse)Not determined19332321637323348Mouse

Markers in Region
RH136272  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38195,851,470 - 5,851,664UniSTSGRCm38
MGSCv37195,851,470 - 5,851,664UniSTSGRCm37
Celera195,721,524 - 5,721,718UniSTS
Cytogenetic Map19AUniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_026169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006531828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006531829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC142098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK018201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000025728   ⟹   ENSMUSP00000025728
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl195,899,730 - 5,925,302 (-)Ensembl
GRCm38.p6 Ensembl195,849,702 - 5,875,274 (-)Ensembl
Ensembl Acc Id: ENSMUST00000133729
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl195,912,144 - 5,913,710 (-)Ensembl
GRCm38.p6 Ensembl195,862,116 - 5,863,682 (-)Ensembl
Ensembl Acc Id: ENSMUST00000145026
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl195,915,212 - 5,923,458 (-)Ensembl
GRCm38.p6 Ensembl195,865,184 - 5,873,430 (-)Ensembl
Ensembl Acc Id: ENSMUST00000155227   ⟹   ENSMUSP00000116453
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl195,915,298 - 5,925,267 (-)Ensembl
GRCm38.p6 Ensembl195,865,270 - 5,875,239 (-)Ensembl
RefSeq Acc Id: NM_026169   ⟹   NP_080445
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39195,901,002 - 5,925,236 (-)NCBI
GRCm38195,850,974 - 5,875,208 (-)NCBI
MGSCv37195,850,974 - 5,875,208 (-)RGD
Celera195,721,028 - 5,745,270 (-)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006531828   ⟹   XP_006531891
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39195,901,267 - 5,925,294 (-)NCBI
GRCm38195,851,239 - 5,875,266 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006531829   ⟹   XP_006531892
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39195,901,267 - 5,925,297 (-)NCBI
GRCm38195,851,239 - 5,875,269 (-)NCBI
Sequence:
RefSeq Acc Id: NP_080445   ⟸   NM_026169
- UniProtKB: Q9CSY6 (UniProtKB/Swiss-Prot),   Q99KB3 (UniProtKB/Swiss-Prot),   Q8C7U5 (UniProtKB/Swiss-Prot),   Q8C7U3 (UniProtKB/Swiss-Prot),   Q9DC30 (UniProtKB/Swiss-Prot),   Q3UFK8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006531892   ⟸   XM_006531829
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006531891   ⟸   XM_006531828
- Peptide Label: isoform X1
- UniProtKB: Q9CSY6 (UniProtKB/Swiss-Prot),   Q99KB3 (UniProtKB/Swiss-Prot),   Q8C7U5 (UniProtKB/Swiss-Prot),   Q8C7U3 (UniProtKB/Swiss-Prot),   Q9DC30 (UniProtKB/Swiss-Prot),   Q3UFK8 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000025728   ⟸   ENSMUST00000025728
Ensembl Acc Id: ENSMUSP00000116453   ⟸   ENSMUST00000155227
Protein Domains
FERM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q3UFK8-F1-model_v2 AlphaFold Q3UFK8 1-466 view protein structure

Promoters
RGD ID:6830044
Promoter ID:MM_KWN:26120
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000085654
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36195,864,216 - 5,864,716 (-)MPROMDB
RGD ID:6829646
Promoter ID:MM_KWN:26121
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   Lung,   MEF_B6
Transcripts:UC008GFO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36195,873,221 - 5,874,132 (-)MPROMDB
RGD ID:6829648
Promoter ID:MM_KWN:26122
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000085648,   OTTMUST00000085653,   UC008GFP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36195,875,029 - 5,875,529 (-)MPROMDB
RGD ID:13678592
Promoter ID:EPDNEW_M23445
Type:initiation region
Name:Frmd8_1
Description:Mus musculus FERM domain containing 8 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38195,875,219 - 5,875,279EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914707 AgrOrtholog
Ensembl Genes ENSMUSG00000024816 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000025728 ENTREZGENE
  ENSMUST00000025728.13 UniProtKB/Swiss-Prot
  ENSMUST00000155227.2 UniProtKB/TrEMBL
Gene3D-CATH 1.20.80.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/Swiss-Prot
InterPro Band_41_domain UniProtKB/Swiss-Prot
  FERM/acyl-CoA-bd_prot_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_central UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_domain_containing UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot
KEGG Report mmu:67457 UniProtKB/Swiss-Prot
MGD MGI:1914707 ENTREZGENE
NCBI Gene 67457 ENTREZGENE
PANTHER FERM DOMAIN-CONTAINING PROTEIN 8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KREV INTERACTION TRAPPED 1-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam FERM_M UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Frmd8 PhenoGen
PROSITE FERM_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART B41 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47031 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3Z5B2_MOUSE UniProtKB/TrEMBL
  FRMD8_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8C7U3 ENTREZGENE
  Q8C7U5 ENTREZGENE
  Q8CEN3_MOUSE UniProtKB/TrEMBL
  Q99KB3 ENTREZGENE
  Q9CSY6 ENTREZGENE
  Q9DC30 ENTREZGENE
UniProt Secondary Q8C7U3 UniProtKB/Swiss-Prot
  Q8C7U5 UniProtKB/Swiss-Prot
  Q99KB3 UniProtKB/Swiss-Prot
  Q9CSY6 UniProtKB/Swiss-Prot
  Q9DC30 UniProtKB/Swiss-Prot