Ank1 (ankyrin 1, erythroid) - Rat Genome Database

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Gene: Ank1 (ankyrin 1, erythroid) Mus musculus
Analyze
Symbol: Ank1
Name: ankyrin 1, erythroid
RGD ID: 1320056
MGI Page MGI
Description: Predicted to enable several functions, including enzyme binding activity; spectrin binding activity; and transmembrane transporter binding activity. Acts upstream of or within several processes, including erythrocyte development; multicellular organismal-level iron ion homeostasis; and porphyrin-containing compound biosynthetic process. Located in cortical cytoskeleton; membrane; and spectrin-associated cytoskeleton. Is expressed in several structures, including central nervous system; embryo mesenchyme; heart; retina; and skeletal muscle. Used to study hereditary spherocytosis type 1 and malaria. Human ortholog(s) of this gene implicated in anemia; hereditary spherocytosis; and hereditary spherocytosis type 1. Orthologous to human ANK1 (ankyrin 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Ank; Ank-1; ankyrin-1; erythrocyte ankyrin; nb; normoblastic anemia; p; pale
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39823,464,852 - 23,640,517 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl823,464,860 - 23,640,513 (+)EnsemblGRCm39 Ensembl
GRCm38822,974,836 - 23,150,501 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl822,974,844 - 23,150,497 (+)EnsemblGRCm38mm10GRCm38
MGSCv37824,085,354 - 24,260,968 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36824,523,820 - 24,616,041 (+)NCBIMGSCv36mm8
Celera824,465,487 - 24,646,749 (+)NCBICelera
Cytogenetic Map8A2NCBI
cM Map811.42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2-butoxyethanol  (EXP)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
aconitine  (ISO)
acrylamide  (EXP)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[e]pyrene  (ISO)
beta-hexachlorocyclohexane  (EXP)
bisphenol A  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
CGP 52608  (ISO)
chlordecone  (EXP)
cisplatin  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (ISO)
dicrotophos  (ISO)
dioxygen  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
ethanol  (EXP)
ethyl methanesulfonate  (ISO)
etoposide  (ISO)
genistein  (EXP,ISO)
gentamycin  (ISO)
lead(0)  (ISO)
lead(2+)  (ISO)
lipopolysaccharide  (ISO)
mercury atom  (ISO)
mercury dibromide  (ISO)
mercury(0)  (ISO)
methapyrilene  (ISO)
mono(2-ethylhexyl) phthalate  (EXP)
O-methyleugenol  (ISO)
oxaliplatin  (ISO)
p-chloromercuribenzoic acid  (ISO)
paracetamol  (ISO)
PCB138  (EXP)
phenylmercury acetate  (ISO)
pioglitazone  (EXP)
rotenone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sunitinib  (ISO)
tamoxifen  (EXP)
testosterone  (ISO)
testosterone enanthate  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
trichloroethene  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal bone marrow morphology  (IEA)
abnormal calcium ion homeostasis  (IAGP)
abnormal cardiac thrombosis  (IAGP)
abnormal common myeloid progenitor cell morphology  (IAGP)
abnormal diaphragm morphology  (IAGP)
abnormal erythrocyte morphology  (IAGP)
abnormal erythrocyte physiology  (IAGP)
abnormal erythropoiesis  (IAGP)
abnormal extensor digitorum longus morphology  (IAGP)
abnormal glomerular mesangium morphology  (IAGP)
abnormal iron homeostasis  (IAGP)
abnormal kidney iron level  (IAGP)
abnormal leukocyte cell number  (IAGP)
abnormal muscle electrophysiology  (IAGP)
abnormal myelopoiesis  (IAGP)
abnormal sarcolemma morphology  (IAGP)
abnormal sarcoplasmic reticulum morphology  (IAGP)
abnormal skeletal muscle fiber triad morphology  (IAGP)
abnormal skin pigmentation  (IEA)
abnormal spleen morphology  (IAGP)
abnormal thymus development  (IEA)
acanthocytosis  (IAGP)
anemia  (IAGP)
anisocytosis  (IAGP)
anisopoikilocytosis  (IAGP)
cardiac hypertrophy  (IAGP)
decreased birth weight  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased cellular hemoglobin content  (IAGP)
decreased common myeloid progenitor cell number  (IAGP)
decreased erythrocyte cell number  (IAGP)
decreased fetal weight  (IAGP)
decreased hematocrit  (IAGP)
decreased hemoglobin content  (IAGP)
decreased mean corpuscular hemoglobin  (IAGP)
decreased mean corpuscular hemoglobin concentration  (IAGP)
decreased mean corpuscular volume  (IAGP)
decreased sensitivity to induced morbidity/mortality  (IAGP)
decreased spleen iron level  (IAGP)
decreased susceptibility to parasitic infection  (IAGP)
decreased susceptibility to parasitic infection induced morbidity/mortality  (IAGP)
enlarged heart  (IAGP)
enlarged liver  (IAGP)
enlarged lymph nodes  (IEA)
enlarged spleen  (IAGP)
erythroblastosis  (IAGP)
extramedullary hematopoiesis  (IAGP)
gallstones  (IAGP)
glomerulonephritis  (IAGP)
hemolysis  (IAGP)
hemolytic anemia  (IAGP)
hemosiderosis  (IAGP)
hyperchromasia  (IAGP)
hypochromic anemia  (IEA)
impaired balance  (IAGP)
impaired exercise endurance  (IAGP)
impaired skeletal muscle contractility  (IAGP)
increased blood urea nitrogen level  (IAGP)
increased circulating alanine transaminase level  (IAGP)
increased circulating aspartate transaminase level  (IAGP)
increased circulating bilirubin level  (IAGP)
increased circulating erythropoietin level  (IAGP)
increased erythrocyte cell number  (IAGP)
increased erythrocyte clearance  (IAGP)
increased erythrocyte osmotic fragility  (IAGP)
increased erythrocyte protoporphyrin level  (IAGP)
increased erythroid progenitor cell number  (IAGP)
increased heart weight  (IAGP)
increased hemoglobin concentration distribution width  (IAGP)
increased kidney iron level  (IAGP)
increased kidney weight  (IAGP)
increased leukocyte cell number  (IAGP)
increased liver iron level  (IAGP)
increased lymphocyte cell number  (IAGP)
increased neutrophil cell number  (IAGP)
increased nucleated erythrocyte cell number  (IAGP)
increased spleen iron level  (IAGP)
increased spleen weight  (IAGP)
increased susceptibility to bacterial infection  (IAGP)
increased susceptibility to bacterial infection induced morbidity/mortality  (IAGP)
infertility  (IAGP)
jaundice  (IAGP)
liver abscess  (IAGP)
low mean erythrocyte cell number  (IAGP)
microcytic anemia  (IAGP)
microcytosis  (IAGP)
myopathy  (IAGP)
neonatal lethality, incomplete penetrance  (IAGP)
pallor  (IAGP)
perinatal lethality, incomplete penetrance  (IAGP)
poikilocytosis  (IAGP)
polychromatophilia  (IAGP)
polycythemia  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality, complete penetrance  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature death  (IAGP)
prenatal lethality, incomplete penetrance  (IAGP)
preweaning lethality, complete penetrance  (IAGP)
preweaning lethality, incomplete penetrance  (IAGP)
Purkinje cell degeneration  (IAGP)
reticulocytosis  (IAGP)
schistocytosis  (IAGP)
skeletal muscle fiber degeneration  (IAGP)
spherocytosis  (IAGP)
stomatocytosis  (IAGP)
thrombocytosis  (IAGP)
tremors  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Normoblastosis, a murine model for ankyrin-deficient hemolytic anemia, is caused by a hypomorphic mutation in the erythroid ankyrin gene Ank1. Birkenmeier CS, etal., Hematol J. 2003;4(6):445-9.
2. Ankyrin-1 mutations are a major cause of dominant and recessive hereditary spherocytosis. Eber SW, etal., Nat Genet. 1996 Jun;13(2):214-8.
3. Distribution of ankyrin isoforms and their proteolysis after ischemia and reperfusion in rat brain. Harada K, etal., J Neurochem. 1997 Jul;69(1):371-6.
4. A deep intronic mutation in the ankyrin-1 gene causes diminished protein expression resulting in hemolytic anemia in mice. Huang H, etal., G3 (Bethesda). 2013 Oct 3;3(10):1687-95. doi: 10.1534/g3.113.007013.
5. A novel ENU-generated truncation mutation lacking the spectrin-binding and C-terminal regulatory domains of Ank1 models severe hemolytic hereditary spherocytosis. Hughes MR, etal., Exp Hematol. 2011 Mar;39(3):305-20, 320.e1-2. doi: 10.1016/j.exphem.2010.12.009. Epub 2010 Dec 28.
6. Mapping of the motor neuron degeneration (Mnd) gene, a mouse model of amyotrophic lateral sclerosis (ALS). Messer A, etal., Genomics 1992 Jul;13(3):797-802.
7. MGDs mouse GO annotations MGD data from the GO Consortium
8. MGD IEA MGD IEA
9. Ankyrin gene mutations in japanese patients with hereditary spherocytosis. Nakanishi H, etal., Int J Hematol. 2001 Jan;73(1):54-63.
10. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
11. Frequent de novo mutations of the ANK1 gene mimic a recessive mode of transmission in hereditary spherocytosis: three new ANK1 variants: ankyrins Bari, Napoli II and Anzio. Randon J, etal., Br J Haematol. 1997 Mar;96(3):500-6.
12. Novel roles for erythroid Ankyrin-1 revealed through an ENU-induced null mouse mutant. Rank G, etal., Blood. 2009 Apr 2;113(14):3352-62. doi: 10.1182/blood-2008-08-172841. Epub 2009 Jan 28.
13. Mouse MP Annotation Import Pipeline RGD automated import pipeline
14. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
15. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
16. Proteolysis of erythrocyte-type and brain-type ankyrins in rat heart after postischemic reperfusion. Yoshida K and Harada K, J Biochem (Tokyo). 1997 Aug;122(2):279-85.
17. Suppression of hepcidin expression and iron overload mediate Salmonella susceptibility in ankyrin 1 ENU-induced mutant. Yuki KE, etal., PLoS One. 2013;8(2):e55331. doi: 10.1371/journal.pone.0055331. Epub 2013 Feb 4.
Additional References at PubMed
PMID:658175   PMID:1356891   PMID:1385865   PMID:1386265   PMID:1391963   PMID:1716634   PMID:1832678   PMID:1832936   PMID:1981050   PMID:2139228   PMID:4404581   PMID:4596202  
PMID:5289608   PMID:6234993   PMID:6763106   PMID:7410545   PMID:7492791   PMID:7495297   PMID:7579467   PMID:7613031   PMID:7615634   PMID:8334700   PMID:8471772   PMID:8486643  
PMID:8889548   PMID:9024692   PMID:9236006   PMID:9545640   PMID:9628825   PMID:10349636   PMID:10442092   PMID:10772878   PMID:10878017   PMID:10907638   PMID:11042159   PMID:11076861  
PMID:11217851   PMID:12466851   PMID:12477932   PMID:12719424   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16452087   PMID:16602821   PMID:16728274   PMID:16962094   PMID:17715300  
PMID:18698006   PMID:18723693   PMID:19002483   PMID:20059953   PMID:20142475   PMID:20339087   PMID:21116636   PMID:21406181   PMID:21677750   PMID:21873635   PMID:22147703   PMID:22159418  
PMID:22226968   PMID:22431517   PMID:22723917   PMID:22794259   PMID:24154525   PMID:24603075   PMID:24688720   PMID:25354526   PMID:25362473   PMID:25917818   PMID:26178733   PMID:27848995  
PMID:28701737   PMID:28751503   PMID:29861105   PMID:29866044   PMID:34180393   PMID:34289389  


Genomics

Comparative Map Data
Ank1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39823,464,852 - 23,640,517 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl823,464,860 - 23,640,513 (+)EnsemblGRCm39 Ensembl
GRCm38822,974,836 - 23,150,501 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl822,974,844 - 23,150,497 (+)EnsemblGRCm38mm10GRCm38
MGSCv37824,085,354 - 24,260,968 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36824,523,820 - 24,616,041 (+)NCBIMGSCv36mm8
Celera824,465,487 - 24,646,749 (+)NCBICelera
Cytogenetic Map8A2NCBI
cM Map811.42NCBI
ANK1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38841,653,225 - 41,896,741 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl841,653,220 - 41,896,741 (-)EnsemblGRCh38hg38GRCh38
GRCh37841,510,744 - 41,754,259 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36841,629,901 - 41,774,297 (-)NCBINCBI36Build 36hg18NCBI36
Build 34841,632,000 - 41,641,949NCBI
Celera840,459,268 - 40,702,528 (-)NCBICelera
Cytogenetic Map8p11.21NCBI
HuRef840,038,471 - 40,281,660 (-)NCBIHuRef
CHM1_1841,558,937 - 41,802,421 (-)NCBICHM1_1
T2T-CHM13v2.0841,926,848 - 42,170,259 (-)NCBIT2T-CHM13v2.0
Ank1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21668,876,294 - 69,054,812 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1668,877,504 - 69,054,759 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1674,153,929 - 74,328,599 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01677,581,598 - 77,760,634 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01672,830,782 - 73,009,777 (-)NCBIRnor_WKY
Rnor_6.01673,681,422 - 73,912,605 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1673,681,422 - 73,827,488 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01673,397,821 - 73,459,822 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01673,314,002 - 73,331,197 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41673,333,564 - 73,437,926 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11673,333,832 - 73,438,435 (-)NCBI
Celera1666,776,909 - 66,863,441 (-)NCBICelera
Cytogenetic Map16q12.5NCBI
Ank1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555361,049,407 - 1,237,943 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555361,049,325 - 1,237,943 (+)NCBIChiLan1.0ChiLan1.0
ANK1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1838,346,503 - 38,588,620 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl838,346,503 - 38,588,549 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0840,897,879 - 41,140,290 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
ANK1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11623,858,299 - 23,966,181 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1623,766,193 - 23,964,226 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1624,254,185 - 24,469,762 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01625,498,990 - 25,712,885 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1625,499,092 - 25,712,882 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11623,869,170 - 24,084,432 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01624,430,879 - 24,646,688 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01624,481,503 - 24,697,954 (+)NCBIUU_Cfam_GSD_1.0
Ank1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494346,781,927 - 46,988,338 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936785738,317 - 942,381 (+)EnsemblSpeTri2.0
SpeTri2.0NW_004936785738,323 - 944,734 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANK1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1710,779,055 - 10,985,191 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11710,752,258 - 10,985,129 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21712,184,513 - 12,419,119 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ANK1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1839,627,766 - 39,871,329 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl839,626,981 - 39,871,151 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660521,919,618 - 2,190,241 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ank1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247801,429,403 - 1,617,743 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247801,429,415 - 1,619,010 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:9343
Count of miRNA genes:921
Interacting mature miRNAs:1289
Transcripts:ENSMUST00000033947, ENSMUST00000084038, ENSMUST00000110688, ENSMUST00000117270, ENSMUST00000117296, ENSMUST00000117662, ENSMUST00000118733, ENSMUST00000121075, ENSMUST00000121802, ENSMUST00000123418, ENSMUST00000130311, ENSMUST00000135206, ENSMUST00000141784, ENSMUST00000152511, ENSMUST00000173248, ENSMUST00000173573, ENSMUST00000174435
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13432571Scvg1_msubcutaneous vessel growth QTL 1 (mouse)8124751082Mouse
11533914Mts5_mmammary tumor susceptibility 5 (mouse)8130447432Mouse
4140978Nilac5_mnicotine induced locomotor activity 5 (mouse)Not determined8131773288Mouse
27226756Femd2_mfemur midshaft diameter 2, 5 week (mouse)8495000035067154Mouse
1357525Pnhdlc3_mplasma non-HDL cholesterol 3 (mouse)Not determined8721249923753815Mouse
1301532Scc8_mcolon tumor susceptibility 8 (mouse)Not determined8721249935110107Mouse
1300906Ap8q_malcohol preference 8 QTL (mouse)Not determined8798418941984342Mouse
10412209Cypr7_mcytokine production 7 (mouse)Not determined8810320142103372Mouse
1301929Eae24_msusceptibility to experimental allergic encephalomyelitis 24 (mouse)Not determined8810320142103372Mouse
1301128Sluc20_msusceptibility to lung cancer 20 (mouse)Not determined8810320142103372Mouse
11532713Sluc42_msusceptibility to lung cancer 42 (mouse)81344721035321225Mouse
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
1301088Alcw6_malcohol withdrawal 6 (mouse)Not determined81550657249506729Mouse
1300912Daq19_mdirectional asymmetry QTL 19 (mouse)Not determined81550657249506729Mouse
1301298Pgia4_mproteoglycan induced arthritis 4 (mouse)Not determined81656937350569697Mouse
4142199Poats1_mpost-ovarectomy adrenal tumor susceptibility 1 (mouse)Not determined1708262628849467Mouse
1301550Fembrs2_mfemur breaking strength 2 (mouse)Not determined81832109752321225Mouse
1301160Eae14_msusceptibility to experimental allergic encephalomyelitis 14 (mouse)Not determined81945501853455150Mouse
1300603Cd8ts2_mCD8 T cell subset 2 (mouse)Not determined81945501853455150Mouse

Markers in Region
Ank1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8A2UniSTS
cM Map89.5UniSTS
UniSTS:224946  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38822,983,532 - 22,983,730UniSTSGRCm38
MGSCv37824,094,004 - 24,094,202UniSTSGRCm37
Cytogenetic Map8A2UniSTS
cM Map89.5UniSTS
D8Rck1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38823,141,365 - 23,141,570UniSTSGRCm38
MGSCv37824,251,837 - 24,252,042UniSTSGRCm37
Celera824,637,758 - 24,637,909UniSTS
Cytogenetic Map8A2UniSTS
cM Map88.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001110783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001277280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001277281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001277284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001277286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001277289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001310436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001310437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_031158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_102385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_102386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_378776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC115361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC126445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI846810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC061219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC138029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC171944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ101195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ105945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M84756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U73972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U76758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U76835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000033947   ⟹   ENSMUSP00000033947
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,629,121 - 23,638,710 (+)Ensembl
GRCm38.p6 Ensembl823,139,105 - 23,148,694 (+)Ensembl
RefSeq Acc Id: ENSMUST00000084038   ⟹   ENSMUSP00000081051
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,548,291 - 23,640,513 (+)Ensembl
GRCm38.p6 Ensembl823,058,275 - 23,150,497 (+)Ensembl
RefSeq Acc Id: ENSMUST00000110688   ⟹   ENSMUSP00000106316
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,464,860 - 23,639,949 (+)Ensembl
GRCm38.p6 Ensembl822,974,844 - 23,149,933 (+)Ensembl
RefSeq Acc Id: ENSMUST00000117270   ⟹   ENSMUSP00000113495
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,465,152 - 23,638,323 (+)Ensembl
GRCm38.p6 Ensembl822,975,136 - 23,148,307 (+)Ensembl
RefSeq Acc Id: ENSMUST00000117296   ⟹   ENSMUSP00000113656
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,525,144 - 23,639,297 (+)Ensembl
GRCm38.p6 Ensembl823,035,128 - 23,149,281 (+)Ensembl
RefSeq Acc Id: ENSMUST00000117662   ⟹   ENSMUSP00000113531
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,525,115 - 23,638,806 (+)Ensembl
GRCm38.p6 Ensembl823,035,099 - 23,148,790 (+)Ensembl
RefSeq Acc Id: ENSMUST00000118733   ⟹   ENSMUSP00000112850
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,548,327 - 23,640,513 (+)Ensembl
GRCm38.p6 Ensembl823,058,311 - 23,150,497 (+)Ensembl
RefSeq Acc Id: ENSMUST00000121075   ⟹   ENSMUSP00000112966
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,629,046 - 23,639,295 (+)Ensembl
GRCm38.p6 Ensembl823,139,030 - 23,149,279 (+)Ensembl
RefSeq Acc Id: ENSMUST00000121802   ⟹   ENSMUSP00000113571
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,464,898 - 23,640,510 (+)Ensembl
GRCm38.p6 Ensembl822,974,882 - 23,150,494 (+)Ensembl
RefSeq Acc Id: ENSMUST00000123418   ⟹   ENSMUSP00000121785
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,548,275 - 23,640,513 (+)Ensembl
GRCm38.p6 Ensembl823,058,259 - 23,150,497 (+)Ensembl
RefSeq Acc Id: ENSMUST00000130311
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,630,109 - 23,638,385 (+)Ensembl
GRCm38.p6 Ensembl823,140,093 - 23,148,369 (+)Ensembl
RefSeq Acc Id: ENSMUST00000135206
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,610,965 - 23,617,062 (+)Ensembl
GRCm38.p6 Ensembl823,120,949 - 23,127,046 (+)Ensembl
RefSeq Acc Id: ENSMUST00000141784   ⟹   ENSMUSP00000117966
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,525,247 - 23,639,297 (+)Ensembl
GRCm38.p6 Ensembl823,035,231 - 23,149,281 (+)Ensembl
RefSeq Acc Id: ENSMUST00000152511   ⟹   ENSMUSP00000116533
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,586,117 - 23,613,654 (+)Ensembl
GRCm38.p6 Ensembl823,096,101 - 23,123,638 (+)Ensembl
RefSeq Acc Id: ENSMUST00000173248   ⟹   ENSMUSP00000133322
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,548,541 - 23,639,704 (+)Ensembl
GRCm38.p6 Ensembl823,058,525 - 23,149,688 (+)Ensembl
RefSeq Acc Id: ENSMUST00000173573   ⟹   ENSMUSP00000133901
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,548,541 - 23,639,704 (+)Ensembl
GRCm38.p6 Ensembl823,058,525 - 23,149,688 (+)Ensembl
RefSeq Acc Id: ENSMUST00000174435   ⟹   ENSMUSP00000133668
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,629,293 - 23,638,321 (+)Ensembl
GRCm38.p6 Ensembl823,139,277 - 23,148,305 (+)Ensembl
RefSeq Acc Id: NM_001110783   ⟹   NP_001104253
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,464,852 - 23,640,513 (+)NCBI
GRCm38822,974,836 - 23,150,497 (+)NCBI
MGSCv37824,085,354 - 24,260,968 (+)RGD
Celera824,465,487 - 24,646,750 (+)NCBI
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001277280   ⟹   NP_001264209
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,464,852 - 23,640,513 (+)NCBI
GRCm38822,974,836 - 23,150,497 (+)NCBI
Celera824,465,487 - 24,646,750 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001277281   ⟹   NP_001264210
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,525,115 - 23,640,513 (+)NCBI
GRCm38823,035,099 - 23,150,497 (+)NCBI
Celera824,465,487 - 24,646,750 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001277284   ⟹   NP_001264213
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,525,115 - 23,640,513 (+)NCBI
GRCm38823,035,099 - 23,150,497 (+)NCBI
Celera824,465,487 - 24,646,750 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001277286   ⟹   NP_001264215
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,548,275 - 23,640,513 (+)NCBI
GRCm38823,058,259 - 23,150,497 (+)NCBI
Celera824,465,487 - 24,646,750 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001277289   ⟹   NP_001264218
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,548,275 - 23,640,513 (+)NCBI
GRCm38823,058,259 - 23,150,497 (+)NCBI
Celera824,465,487 - 24,646,750 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001310436   ⟹   NP_001297365
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,629,046 - 23,640,513 (+)NCBI
GRCm38823,139,030 - 23,150,497 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001310437   ⟹   NP_001297366
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,629,046 - 23,640,513 (+)NCBI
GRCm38823,139,030 - 23,150,497 (+)NCBI
Sequence:
RefSeq Acc Id: NM_031158   ⟹   NP_112435
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,548,275 - 23,640,513 (+)NCBI
GRCm38823,058,259 - 23,150,497 (+)NCBI
MGSCv37824,085,354 - 24,260,968 (+)RGD
Celera824,465,487 - 24,646,750 (+)NCBI
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_102385
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,548,275 - 23,640,513 (+)NCBI
GRCm38823,058,259 - 23,150,497 (+)NCBI
Celera824,465,487 - 24,646,750 (+)NCBI
Sequence:
RefSeq Acc Id: NR_102386
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,548,275 - 23,640,513 (+)NCBI
GRCm38823,058,259 - 23,150,497 (+)NCBI
Celera824,465,487 - 24,646,750 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006508989   ⟹   XP_006509052
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,522,255 - 23,640,517 (+)NCBI
GRCm38823,032,239 - 23,150,501 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006508990   ⟹   XP_006509053
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,464,852 - 23,640,517 (+)NCBI
GRCm38822,974,836 - 23,150,501 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006508991   ⟹   XP_006509054
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,524,642 - 23,640,513 (+)NCBI
GRCm38823,034,500 - 23,150,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006508992   ⟹   XP_006509055
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,524,642 - 23,640,513 (+)NCBI
GRCm38823,034,500 - 23,150,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006508993   ⟹   XP_006509056
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,524,642 - 23,640,513 (+)NCBI
GRCm38823,034,500 - 23,150,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006508994   ⟹   XP_006509057
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,524,642 - 23,640,513 (+)NCBI
GRCm38823,034,500 - 23,150,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006508995   ⟹   XP_006509058
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,524,642 - 23,640,513 (+)NCBI
GRCm38823,034,500 - 23,150,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006508996   ⟹   XP_006509059
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,548,284 - 23,640,517 (+)NCBI
GRCm38823,058,268 - 23,150,501 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006508997   ⟹   XP_006509060
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,524,642 - 23,640,513 (+)NCBI
GRCm38823,034,500 - 23,150,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006508998   ⟹   XP_006509061
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,524,642 - 23,640,513 (+)NCBI
GRCm38823,034,500 - 23,150,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006508999   ⟹   XP_006509062
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,524,642 - 23,640,513 (+)NCBI
GRCm38823,034,500 - 23,150,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509000   ⟹   XP_006509063
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,464,852 - 23,640,517 (+)NCBI
GRCm38822,974,836 - 23,150,501 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509001   ⟹   XP_006509064
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,524,642 - 23,640,513 (+)NCBI
GRCm38823,034,500 - 23,150,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509002   ⟹   XP_006509065
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,524,642 - 23,640,513 (+)NCBI
GRCm38823,034,500 - 23,150,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509003   ⟹   XP_006509066
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,524,642 - 23,605,577 (+)NCBI
GRCm38823,034,500 - 23,115,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243250   ⟹   XP_030099110
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,524,642 - 23,640,513 (+)NCBI
GRCm38823,034,500 - 23,150,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036153729   ⟹   XP_036009622
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,629,172 - 23,640,513 (+)NCBI
Sequence:
RefSeq Acc Id: XR_378776
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,524,642 - 23,625,588 (+)NCBI
GRCm38823,034,500 - 23,135,572 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001104253 (Get FASTA)   NCBI Sequence Viewer  
  NP_001264209 (Get FASTA)   NCBI Sequence Viewer  
  NP_001264210 (Get FASTA)   NCBI Sequence Viewer  
  NP_001264213 (Get FASTA)   NCBI Sequence Viewer  
  NP_001264215 (Get FASTA)   NCBI Sequence Viewer  
  NP_001264218 (Get FASTA)   NCBI Sequence Viewer  
  NP_001297365 (Get FASTA)   NCBI Sequence Viewer  
  NP_001297366 (Get FASTA)   NCBI Sequence Viewer  
  NP_112435 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509052 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509053 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509054 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509055 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509056 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509057 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509058 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509059 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509060 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509061 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509062 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509063 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509064 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509065 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509066 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099110 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009622 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA37236 (Get FASTA)   NCBI Sequence Viewer  
  AAB19206 (Get FASTA)   NCBI Sequence Viewer  
  AAB37323 (Get FASTA)   NCBI Sequence Viewer  
  AAB37324 (Get FASTA)   NCBI Sequence Viewer  
  AAB37325 (Get FASTA)   NCBI Sequence Viewer  
  AAC24156 (Get FASTA)   NCBI Sequence Viewer  
  AAH61219 (Get FASTA)   NCBI Sequence Viewer  
  AAH79910 (Get FASTA)   NCBI Sequence Viewer  
  AAI38030 (Get FASTA)   NCBI Sequence Viewer  
  AAI71944 (Get FASTA)   NCBI Sequence Viewer  
  BAE22074 (Get FASTA)   NCBI Sequence Viewer  
  BAE27815 (Get FASTA)   NCBI Sequence Viewer  
  BAE28015 (Get FASTA)   NCBI Sequence Viewer  
  BAE34375 (Get FASTA)   NCBI Sequence Viewer  
  CAA48801 (Get FASTA)   NCBI Sequence Viewer  
  CAA48802 (Get FASTA)   NCBI Sequence Viewer  
  CAA48803 (Get FASTA)   NCBI Sequence Viewer  
  EDL32870 (Get FASTA)   NCBI Sequence Viewer  
  Q02357 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_112435   ⟸   NM_031158
- Peptide Label: isoform 2
- UniProtKB: Q02357 (UniProtKB/Swiss-Prot),   G5E8J2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001104253   ⟸   NM_001110783
- Peptide Label: isoform 1
- UniProtKB: Q02357 (UniProtKB/Swiss-Prot),   A0A0R4J1N7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001264209   ⟸   NM_001277280
- Peptide Label: isoform 3
- UniProtKB: Q02357 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001264213   ⟸   NM_001277284
- Peptide Label: isoform 5
- UniProtKB: Q0VGY9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001264210   ⟸   NM_001277281
- Peptide Label: isoform 4
- UniProtKB: Q02357 (UniProtKB/Swiss-Prot),   E9QNT8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001264218   ⟸   NM_001277289
- Peptide Label: isoform 7
- UniProtKB: Q02357 (UniProtKB/Swiss-Prot),   D3YTV8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001264215   ⟸   NM_001277286
- Peptide Label: isoform 6
- UniProtKB: Q02357 (UniProtKB/Swiss-Prot),   B7ZW98 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006509053   ⟸   XM_006508990
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006509063   ⟸   XM_006509000
- Peptide Label: isoform X12
- UniProtKB: D3Z5M4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006509066   ⟸   XM_006509003
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_006509064   ⟸   XM_006509001
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_006509057   ⟸   XM_006508994
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006509056   ⟸   XM_006508993
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006509052   ⟸   XM_006508989
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006509060   ⟸   XM_006508997
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_006509061   ⟸   XM_006508998
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_006509065   ⟸   XM_006509002
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_006509062   ⟸   XM_006508999
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_006509055   ⟸   XM_006508992
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006509054   ⟸   XM_006508991
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006509058   ⟸   XM_006508995
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_006509059   ⟸   XM_006508996
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: NP_001297365   ⟸   NM_001310436
- Peptide Label: isoform 8 precursor
- UniProtKB: Q02357 (UniProtKB/Swiss-Prot),   Q0VGY9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001297366   ⟸   NM_001310437
- Peptide Label: isoform 9 precursor
- UniProtKB: Q02357 (UniProtKB/Swiss-Prot),   A0A6P7RI01 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030099110   ⟸   XM_030243250
- Peptide Label: isoform X13
RefSeq Acc Id: ENSMUSP00000106316   ⟸   ENSMUST00000110688
RefSeq Acc Id: ENSMUSP00000112850   ⟸   ENSMUST00000118733
RefSeq Acc Id: ENSMUSP00000116533   ⟸   ENSMUST00000152511
RefSeq Acc Id: ENSMUSP00000033947   ⟸   ENSMUST00000033947
RefSeq Acc Id: ENSMUSP00000133668   ⟸   ENSMUST00000174435
RefSeq Acc Id: ENSMUSP00000112966   ⟸   ENSMUST00000121075
RefSeq Acc Id: ENSMUSP00000133322   ⟸   ENSMUST00000173248
RefSeq Acc Id: ENSMUSP00000133901   ⟸   ENSMUST00000173573
RefSeq Acc Id: ENSMUSP00000081051   ⟸   ENSMUST00000084038
RefSeq Acc Id: ENSMUSP00000121785   ⟸   ENSMUST00000123418
RefSeq Acc Id: ENSMUSP00000113495   ⟸   ENSMUST00000117270
RefSeq Acc Id: ENSMUSP00000113656   ⟸   ENSMUST00000117296
RefSeq Acc Id: ENSMUSP00000113531   ⟸   ENSMUST00000117662
RefSeq Acc Id: ENSMUSP00000113571   ⟸   ENSMUST00000121802
RefSeq Acc Id: ENSMUSP00000117966   ⟸   ENSMUST00000141784
RefSeq Acc Id: XP_036009622   ⟸   XM_036153729
- Peptide Label: isoform X17
Protein Domains
Death   ZU5

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q02357-F1-model_v2 AlphaFold Q02357 1-1862 view protein structure

Promoters
RGD ID:8666697
Promoter ID:EPDNEW_M11380
Type:initiation region
Name:Ank1_3
Description:Mus musculus ankyrin 1, erythroid , transcript variant 10, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11381  EPDNEW_M11382  EPDNEW_M11383  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38822,974,801 - 22,974,861EPDNEW
RGD ID:8666699
Promoter ID:EPDNEW_M11381
Type:initiation region
Name:Ank1_1
Description:Mus musculus ankyrin 1, erythroid , transcript variant 10, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11380  EPDNEW_M11382  EPDNEW_M11383  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38823,035,144 - 23,035,204EPDNEW
RGD ID:8666701
Promoter ID:EPDNEW_M11382
Type:initiation region
Name:Ank1_4
Description:Mus musculus ankyrin 1, erythroid , transcript variant 10, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11380  EPDNEW_M11381  EPDNEW_M11383  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38823,058,327 - 23,058,387EPDNEW
RGD ID:8666703
Promoter ID:EPDNEW_M11383
Type:initiation region
Name:Ank1_2
Description:Mus musculus ankyrin 1, erythroid , transcript variant 10, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11380  EPDNEW_M11381  EPDNEW_M11382  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38823,139,048 - 23,139,108EPDNEW
RGD ID:6842759
Promoter ID:MM_KWN:53945
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000084037,   ENSMUST00000110685
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36824,173,481 - 24,173,981 (+)MPROMDB
RGD ID:6842760
Promoter ID:MM_KWN:53947
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000065241
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36824,205,919 - 24,206,419 (+)MPROMDB
RGD ID:6842764
Promoter ID:MM_KWN:53948
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000065242
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36824,230,736 - 24,231,236 (+)MPROMDB
RGD ID:6842763
Promoter ID:MM_KWN:53950
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Spleen
Transcripts:UC009LEK.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36824,241,836 - 24,242,537 (+)MPROMDB
RGD ID:6842766
Promoter ID:MM_KWN:53951
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Spleen
Transcripts:UC009LEL.1,   UC009LEM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36824,249,086 - 24,249,887 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:88024 AgrOrtholog
Ensembl Genes ENSMUSG00000031543 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000033947 ENTREZGENE
  ENSMUSP00000033947.9 UniProtKB/Swiss-Prot
  ENSMUSP00000081051 ENTREZGENE
  ENSMUSP00000081051.5 UniProtKB/TrEMBL
  ENSMUSP00000106316 ENTREZGENE
  ENSMUSP00000106316.3 UniProtKB/Swiss-Prot
  ENSMUSP00000112850 ENTREZGENE
  ENSMUSP00000112850.2 UniProtKB/TrEMBL
  ENSMUSP00000112966 ENTREZGENE
  ENSMUSP00000112966.2 UniProtKB/Swiss-Prot
  ENSMUSP00000113495 ENTREZGENE
  ENSMUSP00000113495.3 UniProtKB/TrEMBL
  ENSMUSP00000113531 ENTREZGENE
  ENSMUSP00000113531.2 UniProtKB/TrEMBL
  ENSMUSP00000113571 ENTREZGENE
  ENSMUSP00000113571.3 UniProtKB/TrEMBL
  ENSMUSP00000113656 ENTREZGENE
  ENSMUSP00000113656.2 UniProtKB/TrEMBL
  ENSMUSP00000116533.2 UniProtKB/TrEMBL
  ENSMUSP00000117966 ENTREZGENE
  ENSMUSP00000117966.3 UniProtKB/TrEMBL
  ENSMUSP00000121785.2 UniProtKB/TrEMBL
  ENSMUSP00000133322 ENTREZGENE
  ENSMUSP00000133322.2 UniProtKB/TrEMBL
  ENSMUSP00000133668.2 UniProtKB/TrEMBL
  ENSMUSP00000133901.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000033947 ENTREZGENE
  ENSMUST00000033947.15 UniProtKB/Swiss-Prot
  ENSMUST00000084038 ENTREZGENE
  ENSMUST00000084038.11 UniProtKB/TrEMBL
  ENSMUST00000110688 ENTREZGENE
  ENSMUST00000110688.9 UniProtKB/Swiss-Prot
  ENSMUST00000117270 ENTREZGENE
  ENSMUST00000117270.9 UniProtKB/TrEMBL
  ENSMUST00000117296 ENTREZGENE
  ENSMUST00000117296.8 UniProtKB/TrEMBL
  ENSMUST00000117662 ENTREZGENE
  ENSMUST00000117662.8 UniProtKB/TrEMBL
  ENSMUST00000118733 ENTREZGENE
  ENSMUST00000118733.8 UniProtKB/TrEMBL
  ENSMUST00000121075 ENTREZGENE
  ENSMUST00000121075.8 UniProtKB/Swiss-Prot
  ENSMUST00000121802 ENTREZGENE
  ENSMUST00000121802.9 UniProtKB/TrEMBL
  ENSMUST00000123418 ENTREZGENE
  ENSMUST00000123418.8 UniProtKB/TrEMBL
  ENSMUST00000141784 ENTREZGENE
  ENSMUST00000141784.9 UniProtKB/TrEMBL
  ENSMUST00000152511.2 UniProtKB/TrEMBL
  ENSMUST00000173248 ENTREZGENE
  ENSMUST00000173248.8 UniProtKB/TrEMBL
  ENSMUST00000173573 ENTREZGENE
  ENSMUST00000173573.8 UniProtKB/TrEMBL
  ENSMUST00000174435.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.533.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.25.40.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.220.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.2660 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_UPA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DEATH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Death_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11733 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:88024 ENTREZGENE
NCBI Gene 11733 ENTREZGENE
PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  ANKYRIN 1, ERYTHROCYTIC A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANKYRIN DOMAIN-CONTAINING UniProtKB/TrEMBL
  ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  ANKYRIN REPEAT-CONTAINING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANKYRIN-1 UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ank_4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Death UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UPA_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ank1 PhenoGen
PRINTS ANKYRIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DEATH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ANK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DEATH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47986 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0R4J1N7 ENTREZGENE, UniProtKB/TrEMBL
  A0A6P7RI01 ENTREZGENE
  ANK1_MOUSE UniProtKB/Swiss-Prot
  B7ZW98 ENTREZGENE, UniProtKB/TrEMBL
  D3YTV8 ENTREZGENE, UniProtKB/TrEMBL
  D3Z5M4 ENTREZGENE, UniProtKB/TrEMBL
  D6RJ51_MOUSE UniProtKB/TrEMBL
  E9QNT8 ENTREZGENE, UniProtKB/TrEMBL
  F7D1P5_MOUSE UniProtKB/TrEMBL
  G3UXF4_MOUSE UniProtKB/TrEMBL
  G3UY11_MOUSE UniProtKB/TrEMBL
  G5E8J2 ENTREZGENE, UniProtKB/TrEMBL
  G8JL84_MOUSE UniProtKB/TrEMBL
  Q02357 ENTREZGENE
  Q0VGY9 ENTREZGENE, UniProtKB/TrEMBL
  Q61304_MOUSE UniProtKB/TrEMBL
UniProt Secondary P70440 UniProtKB/Swiss-Prot
  P97446 UniProtKB/Swiss-Prot
  P97941 UniProtKB/Swiss-Prot
  Q3TZ35 UniProtKB/Swiss-Prot
  Q3UH42 UniProtKB/Swiss-Prot
  Q3UHP2 UniProtKB/Swiss-Prot
  Q3UYY7 UniProtKB/Swiss-Prot
  Q61302 UniProtKB/Swiss-Prot
  Q61303 UniProtKB/Swiss-Prot
  Q78E45 UniProtKB/Swiss-Prot