Ate1 (arginyltransferase 1) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Ate1 (arginyltransferase 1) Mus musculus
Analyze
Symbol: Ate1
Name: arginyltransferase 1
RGD ID: 1319627
MGI Page MGI
Description: Enables arginyl-tRNA--protein transferase activity. Predicted to act upstream of or within proteasomal protein catabolic process. Located in cytoplasm and nucleus. Is expressed in several structures, including embryo mesenchyme; eye; heart; nervous system; and notochord. Orthologous to human ATE1 (arginyltransferase 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI225793; arginine-tRNA--protein transferase 1; arginine-tRNA-protein transferase 1; arginyl-tRNA--protein transferase 1; AW547406; R-transferase 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397129,993,219 - 130,122,349 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7129,993,223 - 130,122,099 (-)EnsemblGRCm39 Ensembl
GRCm387130,391,493 - 130,520,619 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7130,391,493 - 130,520,369 (-)EnsemblGRCm38mm10GRCm38
MGSCv377137,535,007 - 137,663,475 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367130,182,641 - 130,311,109 (-)NCBIMGSCv36mm8
Celera7130,214,810 - 130,336,958 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map773.19NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IDA,ISO)
nucleus  (IDA,ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal blood vessel morphology  (IAGP)
abnormal cell physiology  (IAGP)
abnormal coat/hair pigmentation  (IAGP)
abnormal cranium morphology  (IAGP)
abnormal heart atrium morphology  (IAGP)
abnormal heart morphology  (IEA)
abnormal intercalated disk morphology  (IAGP)
abnormal intestinal absorption  (IAGP)
abnormal myocardial fiber morphology  (IAGP)
abnormal myocardial fiber physiology  (IAGP)
abnormal pancreas morphology  (IEA)
abnormal seminal vesicle morphology  (IEA)
abnormal spermatid morphology  (IAGP)
abnormal testis development  (IAGP)
abnormal vascular regression  (IAGP)
abnormal white adipose tissue physiology  (IAGP)
atrial septal defect  (IAGP)
cerebral edema  (IAGP)
decreased abdominal adipose tissue amount  (IAGP)
decreased body length  (IAGP)
decreased brown fat cell size  (IAGP)
decreased cardiac muscle contractility  (IAGP)
decreased circulating glucose level  (IAGP)
decreased core body temperature  (IAGP)
decreased litter size  (IAGP)
decreased male germ cell number  (IAGP)
decreased susceptibility to diet-induced obesity  (IAGP)
decreased white adipose tissue amount  (IAGP)
decreased white fat cell size  (IAGP)
embryonic growth arrest  (IAGP)
embryonic lethality prior to tooth bud stage  (IEA)
enlarged heart  (IEA)
hemorrhage  (IAGP)
hyperactivity  (IAGP)
impaired adaptive thermogenesis  (IAGP)
increased basal metabolism  (IAGP)
increased brain size  (IAGP)
increased brain weight  (IAGP)
increased heart weight  (IAGP)
increased kidney weight  (IAGP)
increased locomotor activity  (IAGP)
increased startle reflex  (IAGP)
kyphosis  (IAGP)
lethality throughout fetal growth and development, complete penetrance  (IAGP)
lethality throughout fetal growth and development, incomplete penetrance  (IAGP)
male infertility  (IAGP)
pallor  (IAGP)
persistent truncus arteriosus  (IAGP)
polyphagia  (IAGP)
poor grooming  (IAGP)
premature death  (IAGP)
preweaning lethality, complete penetrance  (IEA)
reduced fertility  (IAGP)
reduced male fertility  (IAGP)
seizures  (IAGP)
skin edema  (IAGP)
slow postnatal weight gain  (IAGP)
thin myocardium  (IAGP)
tonic-clonic seizures  (IAGP)
ventricle myocardium hypoplasia  (IAGP)
ventricular septal defect  (IAGP)
weight loss  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. MGD IEA MGD IEA
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9858543   PMID:10349636   PMID:10805755   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12098698   PMID:12477932   PMID:15782199   PMID:16002466   PMID:16141072  
PMID:16141073   PMID:16217033   PMID:16222293   PMID:16826240   PMID:16943202   PMID:17896865   PMID:18948421   PMID:19890395   PMID:19915679   PMID:20300656   PMID:20423325   PMID:21267068  
PMID:21276945   PMID:21784066   PMID:21873635   PMID:22280815   PMID:22577142   PMID:22626847   PMID:22670058   PMID:23159736   PMID:23739549   PMID:24293517   PMID:24529990   PMID:24586749  
PMID:25017061   PMID:25369936   PMID:25970626   PMID:26175007   PMID:26511365   PMID:26686093   PMID:26858254   PMID:27345715   PMID:27510035   PMID:27685622   PMID:27838335   PMID:28844905  
PMID:28900170   PMID:29507222   PMID:30177837   PMID:30385798   PMID:30597201   PMID:32325033   PMID:32554809   PMID:33228359   PMID:33931669   PMID:34896361   PMID:36184612   PMID:36417873  
PMID:37385404   PMID:38355793  


Genomics

Comparative Map Data
Ate1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397129,993,219 - 130,122,349 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7129,993,223 - 130,122,099 (-)EnsemblGRCm39 Ensembl
GRCm387130,391,493 - 130,520,619 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7130,391,493 - 130,520,369 (-)EnsemblGRCm38mm10GRCm38
MGSCv377137,535,007 - 137,663,475 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367130,182,641 - 130,311,109 (-)NCBIMGSCv36mm8
Celera7130,214,810 - 130,336,958 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map773.19NCBI
ATE1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810121,740,424 - 121,928,463 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10121,709,393 - 121,928,801 (-)EnsemblGRCh38hg38GRCh38
GRCh3710123,499,939 - 123,687,978 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610123,492,615 - 123,677,536 (-)NCBINCBI36Build 36hg18NCBI36
Build 3410123,492,615 - 123,677,536NCBI
Celera10117,234,468 - 117,419,505 (-)NCBICelera
Cytogenetic Map10q26.13NCBI
HuRef10117,133,354 - 117,318,556 (-)NCBIHuRef
CHM1_110123,787,379 - 123,972,275 (-)NCBICHM1_1
T2T-CHM13v2.010122,636,555 - 122,824,802 (-)NCBIT2T-CHM13v2.0
Ate1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81194,391,843 - 194,514,284 (-)NCBIGRCr8
mRatBN7.21184,961,548 - 185,081,112 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1184,963,562 - 185,080,908 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1193,311,816 - 193,430,711 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01200,486,474 - 200,605,624 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01193,158,249 - 193,277,403 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01200,958,564 - 201,082,100 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01200,810,741 - 200,885,593 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1200,810,771 - 201,082,727 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01207,990,426 - 208,113,961 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01207,845,473 - 207,918,143 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41189,718,854 - 189,835,976 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11189,871,668 - 189,986,292 (-)NCBI
Celera1182,580,323 - 182,695,459 (-)NCBICelera
Cytogenetic Map1q37NCBI
Ate1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955477126,626 - 281,898 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955477126,626 - 281,898 (-)NCBIChiLan1.0ChiLan1.0
ATE1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28133,602,710 - 133,790,429 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110133,608,064 - 133,795,450 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010118,316,655 - 118,504,409 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110121,730,231 - 121,917,346 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10121,730,231 - 121,917,346 (-)Ensemblpanpan1.1panPan2
ATE1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12831,528,000 - 31,690,656 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2831,531,193 - 31,690,945 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2831,669,432 - 31,821,086 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02832,064,487 - 32,227,283 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2832,064,490 - 32,227,461 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12831,595,148 - 31,758,392 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02831,617,378 - 31,779,819 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02831,822,177 - 31,984,396 (-)NCBIUU_Cfam_GSD_1.0
Ate1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721314,704,887 - 14,847,011 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648610,713,527 - 10,856,345 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648610,714,287 - 10,854,982 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATE1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14131,412,630 - 131,592,789 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114131,382,019 - 131,580,443 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214142,620,486 - 142,861,313 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATE1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19114,499,173 - 114,680,324 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604875,788,621 - 75,974,042 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ate1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473724,744,574 - 24,907,680 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473724,744,557 - 24,910,310 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ate1
4573 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3260
Count of miRNA genes:710
Interacting mature miRNAs:894
Transcripts:ENSMUST00000033139, ENSMUST00000035458, ENSMUST00000094017, ENSMUST00000178534
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7101693381135693530Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
11059562Lmr21b_mleishmaniasis resistance 21b (mouse)7110967235144967336Mouse
1302032Alcp12_malcohol preference locus 12 (mouse)Not determined7111166122144995196Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
1301590Pbwg3_mpostnatal body weight growth 3 (mouse)Not determined7127311241144995196Mouse
1300566Sluc8_msusceptibility to lung cancer 8 (mouse)Not determined7127398151144995196Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7100750722134750843Mouse
14746988Manh63_mmandible shape 63 (mouse)7127735437144995196Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
4142444Femwf5_mfemur work to failure 5 (mouse)Not determined112552248144995196Mouse
1301447Fembm3_mfemoral bone morphometry 3 (mouse)Not determined7100993261134993342Mouse
10412104Tons2_mtongue size 2 (mouse)Not determined799837716133837716Mouse
1300677Bmd9_mbone mineral density 9 (mouse)Not determined7116634089144995196Mouse
4142312Nilac4_mnicotine induced locomotor activity 4 (mouse)Not determined7102485219136485380Mouse
1300747Skts2_mskin tumor susceptibility 2 (mouse)Not determined7112922733144995196Mouse
1301898Alcp14_malcohol preference locus 14 (mouse)Not determined7111166122144995196Mouse
1357711Adbg1_madult body growth 1 (mouse)Not determined7118693381144398314Mouse
1301903Tlsm1_mthymic lymphoma susceptible 1 (mouse)Not determined7122250663135170901Mouse
10402499Lmr21_mleishmaniasis resistance 21 (mouse)Not determined7110967235144967336Mouse
1301773Stheal7_msoft tissue heal 7 (mouse)Not determined7119132573144995196Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
1301105Cfld4_mcystic fibrosis lung disease 4 (mouse)Not determined7101693381135693530Mouse
1300721Cfbw3_mcystic fibrosis body weight 3 (mouse)Not determined7101693381135693530Mouse
5491192Mobq1_mmultigenic obesity QTL 1 (mouse)Not determined7105250663139250811Mouse
14700684Civq1_mcerebral infarct volume QTL 1 (mouse)7109707335143707335Mouse
1300670Sluc19_msusceptibility to lung cancer 19 (mouse)Not determined7111166122144995196Mouse
14700687Civq5_mcerebral infarct volume QTL 5 (mouse)7109707335143707335Mouse
14700688Civq6_mcerebral infarct volume QTL 6 (mouse)7109707335143707335Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
13524852Asrq7a_macoustic startle response 7a (mouse)7105350008139350008Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse
15092059Wogrme1_mweek one growth rate, maternal effect 1 (mouse)7117199227134101729Mouse

Markers in Region
RH135973  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387130,392,104 - 130,392,268UniSTSGRCm38
MGSCv377137,535,618 - 137,535,782UniSTSGRCm37
Celera7130,215,421 - 130,215,585UniSTS
Cytogenetic Map7F3UniSTS
AW547406  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387130,392,026 - 130,392,131UniSTSGRCm38
MGSCv377137,535,540 - 137,535,645UniSTSGRCm37
Celera7130,215,343 - 130,215,448UniSTS
Cytogenetic Map7F3UniSTS
Whitehead/MRC_RH71340.63UniSTS
D7Mit107  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387130,405,025 - 130,405,170UniSTSGRCm38
MGSCv377137,548,539 - 137,548,684UniSTSGRCm37
Cytogenetic Map7F3UniSTS
cM Map764.0UniSTS
Whitehead Genetic750.3UniSTS
Whitehead_YAC7 UniSTS
UniSTS:235790  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387130,392,859 - 130,393,080UniSTSGRCm38
MGSCv377137,536,373 - 137,536,594UniSTSGRCm37
Celera7130,216,176 - 130,216,397UniSTS
Cytogenetic Map7F3UniSTS
AF079096  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387130,394,191 - 130,394,339UniSTSGRCm38
MGSCv377137,537,705 - 137,537,853UniSTSGRCm37
Celera7130,217,508 - 130,217,656UniSTS
Cytogenetic Map7F3UniSTS
Whitehead/MRC_RH71342.84UniSTS
Whitehead/MRC_RH71343.64UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001029895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001136054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001402641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001402642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001402643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001402644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001402645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001402646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001402647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001402648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_013799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_175281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011241659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004933999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC157606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC042601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY123375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ093639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ093640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000033139   ⟹   ENSMUSP00000033139
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7129,993,223 - 130,121,310 (-)Ensembl
GRCm38.p6 Ensembl7130,391,493 - 130,519,580 (-)Ensembl
Ensembl Acc Id: ENSMUST00000035458   ⟹   ENSMUSP00000043365
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7129,993,223 - 130,121,260 (-)Ensembl
GRCm38.p6 Ensembl7130,391,493 - 130,519,530 (-)Ensembl
Ensembl Acc Id: ENSMUST00000094017   ⟹   ENSMUSP00000091556
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7129,996,288 - 130,122,099 (-)Ensembl
GRCm38.p6 Ensembl7130,394,558 - 130,520,369 (-)Ensembl
Ensembl Acc Id: ENSMUST00000178534   ⟹   ENSMUSP00000136956
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7129,996,288 - 130,121,691 (-)Ensembl
GRCm38.p6 Ensembl7130,394,558 - 130,519,961 (-)Ensembl
Ensembl Acc Id: ENSMUST00000207041   ⟹   ENSMUSP00000147132
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7129,996,257 - 130,109,227 (-)Ensembl
GRCm38.p6 Ensembl7130,394,527 - 130,507,497 (-)Ensembl
Ensembl Acc Id: ENSMUST00000207141   ⟹   ENSMUSP00000147239
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7130,110,868 - 130,121,240 (-)Ensembl
GRCm38.p6 Ensembl7130,509,138 - 130,519,510 (-)Ensembl
Ensembl Acc Id: ENSMUST00000208116
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7129,996,075 - 130,020,520 (-)Ensembl
GRCm38.p6 Ensembl7130,394,345 - 130,418,790 (-)Ensembl
Ensembl Acc Id: ENSMUST00000216011   ⟹   ENSMUSP00000148888
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7129,996,288 - 130,121,191 (-)Ensembl
GRCm38.p6 Ensembl7130,394,558 - 130,519,461 (-)Ensembl
RefSeq Acc Id: NM_001029895   ⟹   NP_001025066
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397129,993,223 - 130,121,722 (-)NCBI
GRCm387130,391,493 - 130,520,369 (-)NCBI
MGSCv377137,535,007 - 137,663,475 (-)RGD
Celera7130,214,810 - 130,337,366 (-)NCBI
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001136054   ⟹   NP_001129526
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397129,993,223 - 130,121,279 (-)NCBI
GRCm387130,391,493 - 130,519,580 (-)NCBI
MGSCv377137,535,007 - 137,663,475 (-)RGD
Celera7130,214,810 - 130,337,366 (-)NCBI
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001271343   ⟹   NP_001258272
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397129,993,223 - 130,121,722 (-)NCBI
GRCm387130,391,493 - 130,520,369 (-)NCBI
Celera7130,214,810 - 130,337,366 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001402641   ⟹   NP_001389570
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397129,993,223 - 130,121,279 (-)NCBI
RefSeq Acc Id: NM_001402642   ⟹   NP_001389571
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397129,993,223 - 130,121,722 (-)NCBI
RefSeq Acc Id: NM_001402643   ⟹   NP_001389572
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397129,993,223 - 130,121,279 (-)NCBI
RefSeq Acc Id: NM_001402644   ⟹   NP_001389573
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397129,993,223 - 130,121,722 (-)NCBI
RefSeq Acc Id: NM_001402645   ⟹   NP_001389574
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397129,993,223 - 130,121,279 (-)NCBI
RefSeq Acc Id: NM_001402646   ⟹   NP_001389575
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397130,042,409 - 130,121,279 (-)NCBI
RefSeq Acc Id: NM_001402647   ⟹   NP_001389576
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397130,058,287 - 130,121,279 (-)NCBI
RefSeq Acc Id: NM_001402648   ⟹   NP_001389577
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397130,058,287 - 130,121,722 (-)NCBI
RefSeq Acc Id: NM_013799   ⟹   NP_038827
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397129,993,223 - 130,121,279 (-)NCBI
GRCm387130,391,493 - 130,519,580 (-)NCBI
MGSCv377137,535,007 - 137,663,475 (-)RGD
Celera7130,214,810 - 130,337,366 (-)NCBI
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_175281
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397129,993,223 - 130,121,279 (-)NCBI
RefSeq Acc Id: XM_011241659   ⟹   XP_011239961
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397130,056,245 - 130,121,305 (-)NCBI
GRCm387130,454,515 - 130,519,575 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152609   ⟹   XP_036008502
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397129,993,219 - 130,121,305 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152610   ⟹   XP_036008503
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397129,993,219 - 130,121,305 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152611   ⟹   XP_036008504
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397129,993,223 - 130,121,225 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004933999
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397130,106,424 - 130,121,305 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004934000
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397130,105,452 - 130,121,305 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004934001
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397130,106,465 - 130,122,349 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001025066 (Get FASTA)   NCBI Sequence Viewer  
  NP_001129526 (Get FASTA)   NCBI Sequence Viewer  
  NP_001258272 (Get FASTA)   NCBI Sequence Viewer  
  NP_001389570 (Get FASTA)   NCBI Sequence Viewer  
  NP_001389571 (Get FASTA)   NCBI Sequence Viewer  
  NP_001389572 (Get FASTA)   NCBI Sequence Viewer  
  NP_001389573 (Get FASTA)   NCBI Sequence Viewer  
  NP_001389574 (Get FASTA)   NCBI Sequence Viewer  
  NP_001389575 (Get FASTA)   NCBI Sequence Viewer  
  NP_001389576 (Get FASTA)   NCBI Sequence Viewer  
  NP_001389577 (Get FASTA)   NCBI Sequence Viewer  
  NP_038827 (Get FASTA)   NCBI Sequence Viewer  
  XP_011239961 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008502 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008503 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008504 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH42601 (Get FASTA)   NCBI Sequence Viewer  
  AAH50948 (Get FASTA)   NCBI Sequence Viewer  
  AAZ03496 (Get FASTA)   NCBI Sequence Viewer  
  AAZ03497 (Get FASTA)   NCBI Sequence Viewer  
  BAC36816 (Get FASTA)   NCBI Sequence Viewer  
  BAE23608 (Get FASTA)   NCBI Sequence Viewer  
  BAE28555 (Get FASTA)   NCBI Sequence Viewer  
  BAE39649 (Get FASTA)   NCBI Sequence Viewer  
  EDL17673 (Get FASTA)   NCBI Sequence Viewer  
  EDL17674 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000033139
  ENSMUSP00000033139.8
  ENSMUSP00000043365
  ENSMUSP00000043365.8
  ENSMUSP00000091556
  ENSMUSP00000091556.4
  ENSMUSP00000136956
  ENSMUSP00000136956.2
  ENSMUSP00000147132.2
  ENSMUSP00000147239.2
  ENSMUSP00000148888
  ENSMUSP00000148888.2
GenBank Protein Q9Z2A5 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_038827   ⟸   NM_013799
- Peptide Label: isoform 1
- UniProtKB: Q8CFP7 (UniProtKB/Swiss-Prot),   Q9Z2A4 (UniProtKB/Swiss-Prot),   Q4FCQ7 (UniProtKB/Swiss-Prot),   Q4FCQ6 (UniProtKB/Swiss-Prot),   Q9Z2A5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001025066   ⟸   NM_001029895
- Peptide Label: isoform 3
- UniProtKB: Q4FCQ7 (UniProtKB/TrEMBL),   Q80YP1 (UniProtKB/TrEMBL),   Q8BP95 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001129526   ⟸   NM_001136054
- Peptide Label: isoform 4
- UniProtKB: Q80YP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258272   ⟸   NM_001271343
- Peptide Label: isoform 2
- UniProtKB: J3QNU1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011239961   ⟸   XM_011241659
- Peptide Label: isoform X4
- Sequence:
Ensembl Acc Id: ENSMUSP00000136956   ⟸   ENSMUST00000178534
Ensembl Acc Id: ENSMUSP00000033139   ⟸   ENSMUST00000033139
Ensembl Acc Id: ENSMUSP00000147239   ⟸   ENSMUST00000207141
Ensembl Acc Id: ENSMUSP00000147132   ⟸   ENSMUST00000207041
Ensembl Acc Id: ENSMUSP00000091556   ⟸   ENSMUST00000094017
Ensembl Acc Id: ENSMUSP00000043365   ⟸   ENSMUST00000035458
Ensembl Acc Id: ENSMUSP00000148888   ⟸   ENSMUST00000216011
RefSeq Acc Id: XP_036008503   ⟸   XM_036152610
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036008502   ⟸   XM_036152609
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036008504   ⟸   XM_036152611
- Peptide Label: isoform X7
RefSeq Acc Id: NP_001389573   ⟸   NM_001402644
- Peptide Label: isoform 8
RefSeq Acc Id: NP_001389571   ⟸   NM_001402642
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001389574   ⟸   NM_001402645
- Peptide Label: isoform 9
- UniProtKB: Q8BP95 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001389572   ⟸   NM_001402643
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001389570   ⟸   NM_001402641
- Peptide Label: isoform 5
- UniProtKB: A0A1L1SQ41 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001389575   ⟸   NM_001402646
- Peptide Label: isoform 10
RefSeq Acc Id: NP_001389577   ⟸   NM_001402648
- Peptide Label: isoform 12
RefSeq Acc Id: NP_001389576   ⟸   NM_001402647
- Peptide Label: isoform 11
Protein Domains
N-end aminoacyl transferase N-terminal   N-end rule aminoacyl transferase C-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Z2A5-F1-model_v2 AlphaFold Q9Z2A5 1-516 view protein structure

Promoters
RGD ID:8665795
Promoter ID:EPDNEW_M10929
Type:initiation region
Name:Ate1_1
Description:Mus musculus arginyltransferase 1 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10930  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387130,519,547 - 130,519,607EPDNEW
RGD ID:8665797
Promoter ID:EPDNEW_M10930
Type:multiple initiation site
Name:Ate1_2
Description:Mus musculus arginyltransferase 1 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10929  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387130,519,992 - 130,520,052EPDNEW
RGD ID:6840656
Promoter ID:MM_KWN:52920
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_013799,   UC009KAB.1,   UC009KAC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367137,663,001 - 137,664,152 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1333870 AgrOrtholog
Ensembl Genes ENSMUSG00000030850 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000033139 ENTREZGENE
  ENSMUST00000033139.15 UniProtKB/Swiss-Prot
  ENSMUST00000035458 ENTREZGENE
  ENSMUST00000035458.15 UniProtKB/Swiss-Prot
  ENSMUST00000094017 ENTREZGENE
  ENSMUST00000094017.5 UniProtKB/Swiss-Prot
  ENSMUST00000178534 ENTREZGENE
  ENSMUST00000178534.8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSMUST00000207041.2 UniProtKB/TrEMBL
  ENSMUST00000207141.2 UniProtKB/TrEMBL
  ENSMUST00000216011 ENTREZGENE
  ENSMUST00000216011.2 UniProtKB/TrEMBL
InterPro Acyl_CoA_acyltransferase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Arg-tRNA-P_Trfase_1_euk UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  N-end_Aminoacyl_Trfase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  N-end_Aminoacyl_Trfase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  N-end_Aminoacyl_Trfase_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11907 UniProtKB/Swiss-Prot
MGD MGI:1333870 ENTREZGENE
NCBI Gene 11907 ENTREZGENE
PANTHER ARGINYL-TRNA--PROTEIN TRANSFERASE 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR21367 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ATE_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ATE_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ate1 PhenoGen
PIRSF ATE1_euk UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF55729 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A140LJ98_MOUSE UniProtKB/TrEMBL
  A0A140LJJ7_MOUSE UniProtKB/TrEMBL
  A0A1L1SQ41 ENTREZGENE, UniProtKB/TrEMBL
  ATE1_MOUSE UniProtKB/Swiss-Prot
  J3QNU1 ENTREZGENE, UniProtKB/TrEMBL
  Q3UUL7_MOUSE UniProtKB/TrEMBL
  Q4FCQ6 ENTREZGENE
  Q4FCQ7 ENTREZGENE
  Q80YP1 ENTREZGENE, UniProtKB/TrEMBL
  Q8BP95 ENTREZGENE, UniProtKB/TrEMBL
  Q8CFP7 ENTREZGENE
  Q9Z2A4 ENTREZGENE
  Q9Z2A5 ENTREZGENE
UniProt Secondary Q4FCQ6 UniProtKB/Swiss-Prot
  Q4FCQ7 UniProtKB/Swiss-Prot
  Q8CFP7 UniProtKB/Swiss-Prot
  Q9Z2A4 UniProtKB/Swiss-Prot