UNK (unk zinc finger) - Rat Genome Database

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Gene: UNK (unk zinc finger) Homo sapiens
Analyze
Symbol: UNK
Name: unk zinc finger
RGD ID: 1319446
HGNC Page HGNC:29369
Description: Enables mRNA CDS binding activity. Involved in cell morphogenesis involved in neuron differentiation and negative regulation of cytoplasmic translation. Located in cytoplasm.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: KIAA1753; RING finger protein unkempt homolog; unk family zinc finger; UNKEMPT; unkempt family zinc finger; unkempt homolog; ZC3H5; ZC3HDC5; zinc finger CCCH domain-containing protein 5; zinc finger CCCH type domain containing 5; zinc finger CCCH-type containing 5; zinc finger CCCH-type domain containing 5
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381775,784,806 - 75,825,799 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1775,784,806 - 75,825,799 (+)EnsemblGRCh38hg38GRCh38
GRCh371773,780,887 - 73,821,880 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361771,292,276 - 71,333,481 (+)NCBINCBI36Build 36hg18NCBI36
Celera1770,370,731 - 70,411,935 (+)NCBICelera
Cytogenetic Map17q25.1NCBI
HuRef1769,206,437 - 69,247,636 (+)NCBIHuRef
CHM1_11773,845,995 - 73,886,818 (+)NCBICHM1_1
T2T-CHM13v2.01776,678,053 - 76,718,950 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IDA,IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:11214970   PMID:15302935   PMID:15489334   PMID:16094384   PMID:16713569   PMID:21873635   PMID:22658674   PMID:22681889   PMID:22939629   PMID:24255178   PMID:25737280   PMID:25940091  
PMID:26641712   PMID:28718761   PMID:29053956   PMID:29395067   PMID:31091453   PMID:31527615   PMID:32123171   PMID:33060197   PMID:33541421   PMID:33961781   PMID:34079125   PMID:34597346  
PMID:34672954   PMID:34709727   PMID:35044719   PMID:35140242   PMID:35563538   PMID:36232890   PMID:36779422   PMID:38580884  


Genomics

Comparative Map Data
UNK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381775,784,806 - 75,825,799 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1775,784,806 - 75,825,799 (+)EnsemblGRCh38hg38GRCh38
GRCh371773,780,887 - 73,821,880 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361771,292,276 - 71,333,481 (+)NCBINCBI36Build 36hg18NCBI36
Celera1770,370,731 - 70,411,935 (+)NCBICelera
Cytogenetic Map17q25.1NCBI
HuRef1769,206,437 - 69,247,636 (+)NCBIHuRef
CHM1_11773,845,995 - 73,886,818 (+)NCBICHM1_1
T2T-CHM13v2.01776,678,053 - 76,718,950 (+)NCBIT2T-CHM13v2.0
Unk
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911115,921,117 - 115,952,040 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11115,921,148 - 115,952,040 (+)EnsemblGRCm39 Ensembl
GRCm3811116,028,616 - 116,061,214 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11116,030,322 - 116,061,214 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711115,891,636 - 115,922,508 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611115,846,412 - 115,877,284 (+)NCBIMGSCv36mm8
Celera11127,792,548 - 127,823,396 (+)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1180.91NCBI
Unk
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810101,764,732 - 101,794,847 (+)NCBIGRCr8
mRatBN7.210101,265,732 - 101,295,950 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10101,265,703 - 101,295,967 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.010104,582,531 - 104,613,102 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10104,582,955 - 104,612,033 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010103,672,269 - 103,702,612 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410106,139,489 - 106,169,639 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.110106,146,657 - 106,184,153 (+)NCBI
Celera1099,839,358 - 99,869,964 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
Unk
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555066,424,638 - 6,470,874 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555066,424,638 - 6,470,406 (-)NCBIChiLan1.0ChiLan1.0
UNK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21991,828,898 - 91,869,727 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11796,653,617 - 96,694,449 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01769,735,509 - 69,776,345 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11775,285,922 - 75,326,427 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1775,285,922 - 75,326,427 (+)Ensemblpanpan1.1panPan2
UNK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.194,767,696 - 4,801,324 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl94,767,743 - 4,801,235 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha95,447,885 - 5,481,378 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.095,437,874 - 5,471,691 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl95,437,874 - 5,471,662 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.195,477,644 - 5,511,117 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.095,587,735 - 5,621,211 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.095,648,419 - 5,682,105 (-)NCBIUU_Cfam_GSD_1.0
Unk
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244056025,406,972 - 5,444,552 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936594967,448 - 1,004,966 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936594967,386 - 1,005,085 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UNK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl125,592,503 - 5,628,247 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1125,592,502 - 5,628,249 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2125,539,232 - 5,574,622 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UNK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11645,858,198 - 45,899,367 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1645,857,376 - 45,899,313 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607716,613,886 - 16,656,296 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Unk
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248015,676,521 - 5,719,128 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248015,676,546 - 5,720,483 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in UNK
43 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 17q24.3-25.3(chr17:69209079-83086677)x3 copy number gain See cases [RCV000052486] Chr17:69209079..83086677 [GRCh38]
Chr17:67205220..81044553 [GRCh37]
Chr17:64716815..78637842 [NCBI36]
Chr17:17q24.3-25.3
pathogenic
GRCh38/hg38 17q23.2-25.3(chr17:36449220-83086677)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|See cases [RCV000052483] Chr17:36449220..83086677 [GRCh38]
Chr17:58617905..81044553 [GRCh37]
Chr17:55972687..78637842 [NCBI36]
Chr17:17q23.2-25.3
pathogenic
GRCh38/hg38 17q25.1(chr17:75636351-75970744)x1 copy number loss See cases [RCV000053453] Chr17:75636351..75970744 [GRCh38]
Chr17:73632431..73966825 [GRCh37]
Chr17:71144026..71478420 [NCBI36]
Chr17:17q25.1
pathogenic
NM_199242.2(UNC13D):c.2956C>T (p.Leu986=) single nucleotide variant Malignant melanoma [RCV000071668] Chr17:75828982 [GRCh38]
Chr17:73825063 [GRCh37]
Chr17:71336658 [NCBI36]
Chr17:17q25.1
not provided
GRCh38/hg38 17q24.3-25.3(chr17:69916435-83102552)x3 copy number gain See cases [RCV000143342] Chr17:69916435..83102552 [GRCh38]
Chr17:67912576..81048189 [GRCh37]
Chr17:65424171..78653717 [NCBI36]
Chr17:17q24.3-25.3
pathogenic
GRCh37/hg19 17q24.2-25.3(chr17:64241326-81041938)x3 copy number gain See cases [RCV000447577] Chr17:64241326..81041938 [GRCh37]
Chr17:17q24.2-25.3
pathogenic
GRCh37/hg19 17q21.31-25.3(chr17:42580684-81085615)x3 copy number gain See cases [RCV000447823] Chr17:42580684..81085615 [GRCh37]
Chr17:17q21.31-25.3
pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938) copy number gain See cases [RCV000511439] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
GRCh37/hg19 17q25.1(chr17:73757329-73992584)x3 copy number gain See cases [RCV000511796] Chr17:73757329..73992584 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2297C>T (p.Ser766Leu) single nucleotide variant not specified [RCV004313564] Chr17:75824281 [GRCh38]
Chr17:73820362 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2083G>A (p.Glu695Lys) single nucleotide variant not specified [RCV004318634] Chr17:75823328 [GRCh38]
Chr17:73819409 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.132G>T (p.Gln44His) single nucleotide variant not specified [RCV004289898] Chr17:75809787 [GRCh38]
Chr17:73805868 [GRCh37]
Chr17:17q25.1
uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3 copy number gain See cases [RCV000512441] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
GRCh37/hg19 17q24.2-25.3(chr17:67002415-81041938)x3 copy number gain See cases [RCV000512573] Chr17:67002415..81041938 [GRCh37]
Chr17:17q24.2-25.3
pathogenic
GRCh37/hg19 17q25.1(chr17:73414856-74037715)x3 copy number gain not provided [RCV000683962] Chr17:73414856..74037715 [GRCh37]
Chr17:17q25.1
uncertain significance
GRCh37/hg19 17q24.1-25.3(chr17:63689671-81041938)x3 copy number gain not provided [RCV000683952] Chr17:63689671..81041938 [GRCh37]
Chr17:17q24.1-25.3
pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3 copy number gain not provided [RCV000739320] Chr17:7214..81058310 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3 copy number gain not provided [RCV000739325] Chr17:12344..81057996 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3 copy number gain not provided [RCV000739324] Chr17:8547..81060040 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
GRCh37/hg19 17q24.1-25.2(chr17:64159738-74891024)x3 copy number gain not provided [RCV000762750] Chr17:64159738..74891024 [GRCh37]
Chr17:17q24.1-25.2
likely pathogenic
GRCh37/hg19 17q25.1(chr17:73596063-73959466)x3 copy number gain not provided [RCV000848371] Chr17:73596063..73959466 [GRCh37]
Chr17:17q25.1
uncertain significance
GRCh37/hg19 17q24.1-25.3(chr17:62778720-81041938)x3 copy number gain not provided [RCV000849900] Chr17:62778720..81041938 [GRCh37]
Chr17:17q24.1-25.3
pathogenic
NM_001080419.3(UNK):c.1105-9T>C single nucleotide variant not provided [RCV000955470] Chr17:75817317 [GRCh38]
Chr17:73813398 [GRCh37]
Chr17:17q25.1
benign
NM_001080419.3(UNK):c.1485C>T (p.Pro495=) single nucleotide variant not provided [RCV000955471] Chr17:75818755 [GRCh38]
Chr17:73814836 [GRCh37]
Chr17:17q25.1
benign
GRCh37/hg19 17q25.1(chr17:72718277-74142256) copy number gain 7q11.23 microduplication syndrome [RCV003325440] Chr17:72718277..74142256 [GRCh37]
Chr17:17q25.1
pathogenic
GRCh37/hg19 17q25.1-25.3(chr17:73261871-78608763)x3 copy number gain not provided [RCV001006919] Chr17:73261871..78608763 [GRCh37]
Chr17:17q25.1-25.3
pathogenic
NM_001080419.3(UNK):c.1198G>A (p.Val400Ile) single nucleotide variant not specified [RCV004685232] Chr17:75817419 [GRCh38]
Chr17:73813500 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.1480G>A (p.Val494Ile) single nucleotide variant not specified [RCV004685234] Chr17:75818750 [GRCh38]
Chr17:73814831 [GRCh37]
Chr17:17q25.1
likely benign
NM_001080419.3(UNK):c.1177C>T (p.Pro393Ser) single nucleotide variant not specified [RCV004685236] Chr17:75817398 [GRCh38]
Chr17:73813479 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.1568A>G (p.Asp523Gly) single nucleotide variant not specified [RCV004685237] Chr17:75819705 [GRCh38]
Chr17:73815786 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.961C>T (p.Gln321Ter) single nucleotide variant not provided [RCV001806981] Chr17:75815253 [GRCh38]
Chr17:73811334 [GRCh37]
Chr17:17q25.1
uncertain significance
GRCh37/hg19 17q25.1-25.3(chr17:73481509-81043199)x3 copy number gain not provided [RCV002276051] Chr17:73481509..81043199 [GRCh37]
Chr17:17q25.1-25.3
pathogenic
NM_001080419.3(UNK):c.2252G>A (p.Arg751Gln) single nucleotide variant not specified [RCV004325725] Chr17:75823497 [GRCh38]
Chr17:73819578 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2078G>A (p.Gly693Asp) single nucleotide variant not specified [RCV004143385] Chr17:75823323 [GRCh38]
Chr17:73819404 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2386G>A (p.Glu796Lys) single nucleotide variant not specified [RCV004191508] Chr17:75824370 [GRCh38]
Chr17:73820451 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.809G>C (p.Gly270Ala) single nucleotide variant not specified [RCV004187512] Chr17:75813811 [GRCh38]
Chr17:73809892 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2056G>A (p.Gly686Ser) single nucleotide variant not specified [RCV004141681] Chr17:75823301 [GRCh38]
Chr17:73819382 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2182G>A (p.Ala728Thr) single nucleotide variant not specified [RCV004113346] Chr17:75823427 [GRCh38]
Chr17:73819508 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.1501G>A (p.Ala501Thr) single nucleotide variant not specified [RCV004155737] Chr17:75818771 [GRCh38]
Chr17:73814852 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2183C>A (p.Ala728Asp) single nucleotide variant not specified [RCV004111357] Chr17:75823428 [GRCh38]
Chr17:73819509 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.734G>A (p.Arg245Gln) single nucleotide variant not specified [RCV004107993] Chr17:75813189 [GRCh38]
Chr17:73809270 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.823G>A (p.Gly275Arg) single nucleotide variant not specified [RCV004216450] Chr17:75813825 [GRCh38]
Chr17:73809906 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2098C>T (p.Arg700Trp) single nucleotide variant not specified [RCV004142984] Chr17:75823343 [GRCh38]
Chr17:73819424 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2030C>T (p.Ala677Val) single nucleotide variant not specified [RCV004111421] Chr17:75823275 [GRCh38]
Chr17:73819356 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2072C>T (p.Ala691Val) single nucleotide variant not specified [RCV004096035] Chr17:75823317 [GRCh38]
Chr17:73819398 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.1130G>C (p.Gly377Ala) single nucleotide variant not specified [RCV004221718] Chr17:75817351 [GRCh38]
Chr17:73813432 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2429C>T (p.Ser810Leu) single nucleotide variant not specified [RCV004180588] Chr17:75824413 [GRCh38]
Chr17:73820494 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.1585G>A (p.Val529Met) single nucleotide variant not specified [RCV004221908] Chr17:75819722 [GRCh38]
Chr17:73815803 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.1255G>A (p.Glu419Lys) single nucleotide variant not specified [RCV004685235] Chr17:75817476 [GRCh38]
Chr17:73813557 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2309T>G (p.Leu770Arg) single nucleotide variant not specified [RCV004339629] Chr17:75824293 [GRCh38]
Chr17:73820374 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.1213T>C (p.Ser405Pro) single nucleotide variant not specified [RCV004335154] Chr17:75817434 [GRCh38]
Chr17:73813515 [GRCh37]
Chr17:17q25.1
uncertain significance
GRCh37/hg19 17q25.1(chr17:73264158-74039659)x3 copy number gain not provided [RCV003485164] Chr17:73264158..74039659 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.104+23del deletion not provided [RCV003663004] Chr17:75784995 [GRCh38]
Chr17:73781076 [GRCh37]
Chr17:17q25.1
benign
NM_001080419.3(UNK):c.1831T>C (p.Ser611Pro) single nucleotide variant not specified [RCV004482105] Chr17:75820102 [GRCh38]
Chr17:73816183 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.209G>A (p.Arg70Gln) single nucleotide variant not specified [RCV004482106] Chr17:75809864 [GRCh38]
Chr17:73805945 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2179C>A (p.Gln727Lys) single nucleotide variant not specified [RCV004482107] Chr17:75823424 [GRCh38]
Chr17:73819505 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.2191G>A (p.Ala731Thr) single nucleotide variant not specified [RCV004482108] Chr17:75823436 [GRCh38]
Chr17:73819517 [GRCh37]
Chr17:17q25.1
likely benign
NM_001080419.3(UNK):c.103A>C (p.Thr35Pro) single nucleotide variant not specified [RCV004482102] Chr17:75784983 [GRCh38]
Chr17:73781064 [GRCh37]
Chr17:17q25.1
uncertain significance
NM_001080419.3(UNK):c.1349A>G (p.Gln450Arg) single nucleotide variant not specified [RCV004482104] Chr17:75818146 [GRCh38]
Chr17:73814227 [GRCh37]
Chr17:17q25.1
uncertain significance
NC_000017.10:g.(?_73720784)_(73975154_?)dup duplication Acyl-CoA oxidase deficiency [RCV004581279] Chr17:73720784..73975154 [GRCh37]
Chr17:17q25.1
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3908
Count of miRNA genes:1077
Interacting mature miRNAs:1336
Transcripts:ENST00000293218, ENST00000586217, ENST00000586527, ENST00000587258, ENST00000587501, ENST00000589666, ENST00000589790, ENST00000592074, ENST00000592629
Prediction methods:Microtar, Miranda, Pita, Pita,Targetscan, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
406938593GWAS587569_Heosinophil percentage of leukocytes QTL GWAS587569 (human)2e-10eosinophil percentage of leukocytesblood eosinophil count to total leukocyte count ratio (CMO:0000369)177580302275803023Human
407114230GWAS763206_Htotal cholesterol measurement QTL GWAS763206 (human)0.0000007total cholesterol measurementblood total cholesterol level (CMO:0000051)177578611075786111Human
407114035GWAS763011_Hlow density lipoprotein cholesterol measurement QTL GWAS763011 (human)2e-11low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)177578611075786111Human
407114435GWAS763411_Hlow density lipoprotein cholesterol measurement QTL GWAS763411 (human)3e-22low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)177578611075786111Human
407102068GWAS751044_Heosinophil count QTL GWAS751044 (human)5e-15eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)177580507375805074Human
406967054GWAS616030_Hbasophil count, eosinophil count QTL GWAS616030 (human)8e-10eosinophil quantity (VT:0002602)blood granulocyte count (CMO:0000111)177580507375805074Human

Markers in Region
D17S1839  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371773,801,863 - 73,802,108UniSTSGRCh37
Build 361771,313,458 - 71,313,703RGDNCBI36
Celera1770,391,913 - 70,392,158RGD
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map17q25.1UniSTS
HuRef1769,227,323 - 69,227,568UniSTS
Marshfield Genetic Map17102.46RGD
Marshfield Genetic Map17102.46UniSTS
Genethon Genetic Map17103.7UniSTS
TNG Radiation Hybrid Map1733729.0UniSTS
deCODE Assembly Map17114.52UniSTS
Stanford-G3 RH Map173272.0UniSTS
NCBI RH Map17783.3UniSTS
GeneMap99-G3 RH Map173773.0UniSTS
RH47803  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371773,821,723 - 73,821,850UniSTSGRCh37
Build 361771,333,318 - 71,333,445RGDNCBI36
Celera1770,411,772 - 70,411,899RGD
Cytogenetic Map17q25.1UniSTS
HuRef1769,247,473 - 69,247,600UniSTS
GeneMap99-GB4 RH Map17482.47UniSTS
NCBI RH Map17787.2UniSTS
RH18221  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371773,804,984 - 73,805,113UniSTSGRCh37
Build 361771,316,579 - 71,316,708RGDNCBI36
Celera1770,395,034 - 70,395,163RGD
Cytogenetic Map17q25.1UniSTS
HuRef1769,230,444 - 69,230,573UniSTS
GeneMap99-GB4 RH Map17483.02UniSTS
NCBI RH Map17787.2UniSTS
RH94321  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371773,793,049 - 73,793,187UniSTSGRCh37
Build 361771,304,644 - 71,304,782RGDNCBI36
Celera1770,383,101 - 70,383,239RGD
Cytogenetic Map17q25.1UniSTS
HuRef1769,218,565 - 69,218,703UniSTS
GeneMap99-GB4 RH Map17483.02UniSTS
SHGC-144594  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371773,805,224 - 73,805,573UniSTSGRCh37
Build 361771,316,819 - 71,317,168RGDNCBI36
Celera1770,395,274 - 70,395,623RGD
Cytogenetic Map17q25.1UniSTS
HuRef1769,230,684 - 69,231,033UniSTS
TNG Radiation Hybrid Map1733722.0UniSTS
SHGC-33699  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371773,804,900 - 73,805,026UniSTSGRCh37
Build 361771,316,495 - 71,316,621RGDNCBI36
Celera1770,394,950 - 70,395,076RGD
Cytogenetic Map17q25.1UniSTS
HuRef1769,230,360 - 69,230,486UniSTS
GeneMap99-G3 RH Map173773.0UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1204 2432 2788 2245 4942 1723 2345 4 622 1948 464 2268 7281 6454 52 3708 847 1731 1612 171

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001080419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_038131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006722145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006722148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011525400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011525401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017025247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017025248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017025249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017025250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047436962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047436963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047436964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047436965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047436966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB051540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC087289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI290733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK307289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC033751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC039606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC064927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC080657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000586217   ⟹   ENSP00000466054
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1775,812,148 - 75,815,221 (+)Ensembl
Ensembl Acc Id: ENST00000586527   ⟹   ENSP00000467849
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1775,784,855 - 75,794,198 (+)Ensembl
Ensembl Acc Id: ENST00000587258   ⟹   ENSP00000467726
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1775,819,739 - 75,824,329 (+)Ensembl
Ensembl Acc Id: ENST00000587501   ⟹   ENSP00000464953
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1775,784,849 - 75,794,124 (+)Ensembl
Ensembl Acc Id: ENST00000589666   ⟹   ENSP00000464893
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1775,784,806 - 75,825,799 (+)Ensembl
Ensembl Acc Id: ENST00000589790
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1775,784,842 - 75,792,165 (+)Ensembl
Ensembl Acc Id: ENST00000592074
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1775,791,771 - 75,792,636 (+)Ensembl
Ensembl Acc Id: ENST00000592629   ⟹   ENSP00000466431
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1775,784,862 - 75,812,319 (+)Ensembl
RefSeq Acc Id: NM_001080419   ⟹   NP_001073888
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,784,806 - 75,825,799 (+)NCBI
GRCh371773,780,920 - 73,821,886 (+)ENTREZGENE
Build 361771,292,276 - 71,333,481 (+)NCBI Archive
Celera1770,370,731 - 70,411,935 (+)RGD
HuRef1769,206,437 - 69,247,636 (+)ENTREZGENE
CHM1_11773,845,995 - 73,886,818 (+)NCBI
T2T-CHM13v2.01776,678,053 - 76,718,950 (+)NCBI
Sequence:
RefSeq Acc Id: NR_038131
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,784,806 - 75,794,193 (+)NCBI
GRCh371773,780,920 - 73,821,886 (+)ENTREZGENE
HuRef1769,206,437 - 69,247,636 (+)ENTREZGENE
CHM1_11773,845,995 - 73,855,349 (+)NCBI
T2T-CHM13v2.01776,678,053 - 76,687,439 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006722148   ⟹   XP_006722211
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,812,272 - 75,825,799 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011525400   ⟹   XP_011523702
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,784,806 - 75,825,799 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011525401   ⟹   XP_011523703
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,814,830 - 75,825,799 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017025248   ⟹   XP_016880737
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,790,787 - 75,825,799 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017025249   ⟹   XP_016880738
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,790,906 - 75,825,799 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047436962   ⟹   XP_047292918
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,785,048 - 75,825,799 (+)NCBI
RefSeq Acc Id: XM_047436963   ⟹   XP_047292919
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,790,906 - 75,825,799 (+)NCBI
RefSeq Acc Id: XM_047436964   ⟹   XP_047292920
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,784,806 - 75,825,799 (+)NCBI
RefSeq Acc Id: XM_047436965   ⟹   XP_047292921
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,784,806 - 75,825,799 (+)NCBI
RefSeq Acc Id: XM_047436966   ⟹   XP_047292922
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,790,906 - 75,825,799 (+)NCBI
RefSeq Acc Id: XM_054317611   ⟹   XP_054173586
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01776,680,072 - 76,718,950 (+)NCBI
RefSeq Acc Id: XM_054317612   ⟹   XP_054173587
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01776,684,152 - 76,718,950 (+)NCBI
RefSeq Acc Id: XM_054317613   ⟹   XP_054173588
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01776,678,053 - 76,718,950 (+)NCBI
RefSeq Acc Id: XM_054317614   ⟹   XP_054173589
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01776,684,152 - 76,718,950 (+)NCBI
RefSeq Acc Id: XM_054317615   ⟹   XP_054173590
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01776,680,072 - 76,718,950 (+)NCBI
RefSeq Acc Id: XM_054317616   ⟹   XP_054173591
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01776,684,152 - 76,718,950 (+)NCBI
RefSeq Acc Id: XM_054317617   ⟹   XP_054173592
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01776,678,053 - 76,718,950 (+)NCBI
RefSeq Acc Id: XM_054317618   ⟹   XP_054173593
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01776,705,424 - 76,718,950 (+)NCBI
RefSeq Acc Id: XM_054317619   ⟹   XP_054173594
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01776,707,982 - 76,718,950 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001073888 (Get FASTA)   NCBI Sequence Viewer  
  XP_006722211 (Get FASTA)   NCBI Sequence Viewer  
  XP_011523702 (Get FASTA)   NCBI Sequence Viewer  
  XP_011523703 (Get FASTA)   NCBI Sequence Viewer  
  XP_016880737 (Get FASTA)   NCBI Sequence Viewer  
  XP_016880738 (Get FASTA)   NCBI Sequence Viewer  
  XP_047292918 (Get FASTA)   NCBI Sequence Viewer  
  XP_047292919 (Get FASTA)   NCBI Sequence Viewer  
  XP_047292920 (Get FASTA)   NCBI Sequence Viewer  
  XP_047292921 (Get FASTA)   NCBI Sequence Viewer  
  XP_047292922 (Get FASTA)   NCBI Sequence Viewer  
  XP_054173586 (Get FASTA)   NCBI Sequence Viewer  
  XP_054173587 (Get FASTA)   NCBI Sequence Viewer  
  XP_054173588 (Get FASTA)   NCBI Sequence Viewer  
  XP_054173589 (Get FASTA)   NCBI Sequence Viewer  
  XP_054173590 (Get FASTA)   NCBI Sequence Viewer  
  XP_054173591 (Get FASTA)   NCBI Sequence Viewer  
  XP_054173592 (Get FASTA)   NCBI Sequence Viewer  
  XP_054173593 (Get FASTA)   NCBI Sequence Viewer  
  XP_054173594 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH53362 (Get FASTA)   NCBI Sequence Viewer  
  BAB21844 (Get FASTA)   NCBI Sequence Viewer  
  EAW89320 (Get FASTA)   NCBI Sequence Viewer  
  EAW89321 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000464893
  ENSP00000464893.1
  ENSP00000464953.1
  ENSP00000466054.1
  ENSP00000466431.1
  ENSP00000467726.1
  ENSP00000467849.1
GenBank Protein Q9C0B0 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001073888   ⟸   NM_001080419
- UniProtKB: Q9C0B0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006722211   ⟸   XM_006722148
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_011523702   ⟸   XM_011525400
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_011523703   ⟸   XM_011525401
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_016880737   ⟸   XM_017025248
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016880738   ⟸   XM_017025249
- Peptide Label: isoform X4
- Sequence:
Ensembl Acc Id: ENSP00000466054   ⟸   ENST00000586217
Ensembl Acc Id: ENSP00000467849   ⟸   ENST00000586527
Ensembl Acc Id: ENSP00000464953   ⟸   ENST00000587501
Ensembl Acc Id: ENSP00000467726   ⟸   ENST00000587258
Ensembl Acc Id: ENSP00000464893   ⟸   ENST00000589666
Ensembl Acc Id: ENSP00000466431   ⟸   ENST00000592629
RefSeq Acc Id: XP_047292921   ⟸   XM_047436965
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047292920   ⟸   XM_047436964
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047292918   ⟸   XM_047436962
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047292919   ⟸   XM_047436963
- Peptide Label: isoform X2
RefSeq Acc Id: XP_047292922   ⟸   XM_047436966
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054173592   ⟸   XM_054317617
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054173588   ⟸   XM_054317613
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054173590   ⟸   XM_054317615
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054173586   ⟸   XM_054317611
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054173589   ⟸   XM_054317614
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054173587   ⟸   XM_054317612
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054173591   ⟸   XM_054317616
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054173593   ⟸   XM_054317618
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054173594   ⟸   XM_054317619
- Peptide Label: isoform X6
Protein Domains
C3H1-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9C0B0-F1-model_v2 AlphaFold Q9C0B0 1-810 view protein structure

Promoters
RGD ID:6794725
Promoter ID:HG_KWN:27126
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   Jurkat
Transcripts:ENST00000293218,   NM_001080419,   UC002JPN.2,   UC002JPO.2
Position:
Human AssemblyChrPosition (strand)Source
Build 361771,292,056 - 71,292,722 (+)MPROMDB
RGD ID:7236337
Promoter ID:EPDNEW_H23913
Type:initiation region
Name:UNK_1
Description:unkempt family zinc finger
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,784,833 - 75,784,893EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:29369 AgrOrtholog
COSMIC UNK COSMIC
Ensembl Genes ENSG00000132478 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000586217.1 UniProtKB/TrEMBL
  ENST00000586527 ENTREZGENE
  ENST00000586527.1 UniProtKB/TrEMBL
  ENST00000587258.1 UniProtKB/TrEMBL
  ENST00000587501.1 UniProtKB/TrEMBL
  ENST00000589666 ENTREZGENE
  ENST00000589666.6 UniProtKB/Swiss-Prot
  ENST00000592629.1 UniProtKB/TrEMBL
Gene3D-CATH Zinc finger, CCCH-type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000132478 GTEx
HGNC ID HGNC:29369 ENTREZGENE
Human Proteome Map UNK Human Proteome Map
InterPro Unkempt-like UniProtKB/Swiss-Prot
  Unkempt_Znf UniProtKB/Swiss-Prot
  Znf_CCCH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_CCCH_sf UniProtKB/Swiss-Prot
KEGG Report hsa:85451 UniProtKB/Swiss-Prot
NCBI Gene 85451 ENTREZGENE
OMIM 616375 OMIM
PANTHER PTHR14493 UniProtKB/Swiss-Prot
  RING FINGER PROTEIN UNKEMPT UniProtKB/Swiss-Prot
Pfam zf-CCCH UniProtKB/Swiss-Prot
  zf_CCCH_5 UniProtKB/Swiss-Prot
PharmGKB PA162408651 PharmGKB
PROSITE ZF_C3H1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ZnF_C3H1 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF90229 UniProtKB/Swiss-Prot
UniProt K7EIZ1_HUMAN UniProtKB/TrEMBL
  K7ELF5_HUMAN UniProtKB/TrEMBL
  K7EMB1_HUMAN UniProtKB/TrEMBL
  K7EQ93_HUMAN UniProtKB/TrEMBL
  K7EQJ1_HUMAN UniProtKB/TrEMBL
  Q9C0B0 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-11-29 UNK  unk zinc finger    unkempt family zinc finger  Symbol and/or name change 5135510 APPROVED
2013-10-22 UNK  unkempt family zinc finger    unkempt homolog (Drosophila)  Symbol and/or name change 5135510 APPROVED