Bnip2 (BCL2/adenovirus E1B interacting protein 2) - Rat Genome Database

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Gene: Bnip2 (BCL2/adenovirus E1B interacting protein 2) Mus musculus
Analyze
Symbol: Bnip2
Name: BCL2/adenovirus E1B interacting protein 2
RGD ID: 1319010
MGI Page MGI
Description: Acts upstream of or within several processes, including blastocyst development; centrosome cycle; and positive regulation of intracellular signal transduction. Located in centriole and spindle pole centrosome. Is expressed in neocortex. Orthologous to human BNIP2 (BCL2 interacting protein 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 5730523P12Rik; BCL2/adenovirus E1B 19 kDa protein-interacting protein 2; BCL2/adenovirus E1B 19 kDa-interacting protein 2 beta; BCL2/adenovirus E1B 19kDa-interacting protein 1, NIP2; BCL2/adenovirus E1B interacting protein 1, NIP2; BNIP2beta; Nip21
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm18847   Gm7769  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39969,896,660 - 69,918,941 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl969,896,748 - 69,915,599 (+)EnsemblGRCm39 Ensembl
GRCm38969,989,438 - 70,011,659 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl969,989,466 - 70,008,317 (+)EnsemblGRCm38mm10GRCm38
MGSCv37969,837,308 - 69,856,124 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36969,788,665 - 69,807,481 (+)NCBIMGSCv36mm8
Celera967,205,929 - 67,224,771 (+)NCBICelera
Cytogenetic Map9DNCBI
cM Map939.15NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Adenovirus E1B 19 kDa and Bcl-2 proteins interact with a common set of cellular proteins. Boyd JM, etal., Cell 1994 Oct 21;79(2):341-51.
2. Mechanisms and functions of p38 MAPK signalling. Cuadrado A and Nebreda AR, Biochem J. 2010 Aug 1;429(3):403-17. doi: 10.1042/BJ20100323.
3. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
4. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
5. MGDs mouse GO annotations MGD data from the GO Consortium
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:10189358   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12089062   PMID:12477932   PMID:14610273   PMID:16107646   PMID:16141072   PMID:16141073   PMID:16919269   PMID:17535851  
PMID:18678706   PMID:19117032   PMID:19244314   PMID:19951366   PMID:20160094   PMID:21267068   PMID:21677750   PMID:21873635   PMID:27626380   PMID:30973865   PMID:30995482   PMID:32325033  
PMID:32554809   PMID:34686700   PMID:36220570  


Genomics

Comparative Map Data
Bnip2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39969,896,660 - 69,918,941 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl969,896,748 - 69,915,599 (+)EnsemblGRCm39 Ensembl
GRCm38969,989,438 - 70,011,659 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl969,989,466 - 70,008,317 (+)EnsemblGRCm38mm10GRCm38
MGSCv37969,837,308 - 69,856,124 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36969,788,665 - 69,807,481 (+)NCBIMGSCv36mm8
Celera967,205,929 - 67,224,771 (+)NCBICelera
Cytogenetic Map9DNCBI
cM Map939.15NCBI
BNIP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381559,659,146 - 59,689,320 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1559,659,146 - 59,689,339 (-)EnsemblGRCh38hg38GRCh38
GRCh371559,951,345 - 59,981,519 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361557,742,356 - 57,768,778 (-)NCBINCBI36Build 36hg18NCBI36
Build 341557,742,355 - 57,768,778NCBI
Celera1536,843,018 - 36,869,598 (-)NCBICelera
Cytogenetic Map15q22.2NCBI
HuRef1536,777,017 - 36,803,599 (-)NCBIHuRef
CHM1_11560,073,017 - 60,099,603 (-)NCBICHM1_1
T2T-CHM13v2.01557,460,850 - 57,491,038 (-)NCBIT2T-CHM13v2.0
Bnip2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8879,521,375 - 79,539,148 (+)NCBIGRCr8
mRatBN7.2870,640,436 - 70,661,782 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl870,640,445 - 70,675,590 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx876,173,901 - 76,187,300 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0874,446,914 - 74,460,313 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0872,285,585 - 72,298,985 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0876,400,333 - 76,426,307 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl876,400,341 - 76,426,503 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0876,654,578 - 76,675,924 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4874,421,904 - 74,435,300 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1874,423,835 - 74,458,781 (+)NCBI
Celera871,072,882 - 71,086,280 (-)NCBICelera
Cytogenetic Map8q24NCBI
Bnip2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545015,157,226 - 15,180,069 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545015,157,411 - 15,180,069 (+)NCBIChiLan1.0ChiLan1.0
BNIP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21648,923,635 - 48,955,642 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11553,106,285 - 53,138,308 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01538,628,798 - 38,659,161 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11556,933,697 - 56,964,197 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1556,933,697 - 56,964,044 (-)Ensemblpanpan1.1panPan2
BNIP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13024,522,397 - 24,546,968 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3024,503,092 - 24,539,440 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3024,496,442 - 24,520,540 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03024,691,322 - 24,715,441 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3024,691,419 - 24,715,417 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13024,616,981 - 24,641,089 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03024,699,414 - 24,723,513 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03024,886,730 - 24,910,833 (-)NCBIUU_Cfam_GSD_1.0
Bnip2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640102,807,285 - 102,827,361 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647120,652,601 - 20,675,325 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647120,655,415 - 20,675,351 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BNIP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1112,344,228 - 112,370,404 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11112,272,883 - 112,370,404 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21124,261,168 - 124,283,937 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BNIP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12623,821,350 - 23,846,130 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2623,821,499 - 23,855,741 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666048117,479,543 - 117,507,302 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bnip2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478112,468,711 - 12,488,360 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478112,468,675 - 12,497,130 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Bnip2
592 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1258
Count of miRNA genes:571
Interacting mature miRNAs:677
Transcripts:ENSMUST00000034754, ENSMUST00000085393, ENSMUST00000117450, ENSMUST00000133307, ENSMUST00000137472, ENSMUST00000143049, ENSMUST00000154772, ENSMUST00000165389
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93397884073439255Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93730619798701707Mouse
10043971Obq32_mobesity QTL 32 (mouse)Not determined93781952871819528Mouse
12790986Pcho9_mplasma cholesterol 9 (mouse)93809957572099575Mouse
12790992Arlsq1_maortic root lesion size QTL 1 (mouse)93809957572099575Mouse
12791002Arlsq2_maortic root lesion size QTL 2 (mouse)93809957572099575Mouse
12738449Spcq2_msperm count QTL 2 (mouse)93939988573399885Mouse
4141071Ath29_matherosclerosis 29 (mouse)Not determined94041959474607925Mouse
1301702Brm1_mbrachyury modifier 1 (mouse)Not determined94080504774805204Mouse
1301558Stheal8_msoft tissue heal 8 (mouse)Not determined94348071477480860Mouse
10045639Heal28_mwound healing/regeneration 28 (mouse)Not determined94348071477480860Mouse
1301435Trigq1_mtriglyceride QTL 1 (mouse)Not determined94442817478428262Mouse
1300563Pgia5_mproteoglycan induced arthritis 5 (mouse)Not determined94883105682831177Mouse
1300716Cd4ts4_mCD4 T cell subset 4 (mouse)Not determined94883105682831177Mouse
4141224Dxmod_mdoxorubicin nephropathy modifier (mouse)Not determined49452421101406120Mouse
14746993Manh66_mmandible shape 66 (mouse)94981404883814048Mouse
1301184Bdln4_mbody length 4 (mouse)Not determined95015132084151448Mouse
1301241Renf1_mrenal failure 1 (mouse)Not determined95203447899792481Mouse
12790990Tgl7_mtriglyceride 7 (mouse)95455996088559960Mouse
10043877Adip21_madiposity 21 (mouse)Not determined95643910890439255Mouse
1301549Bbaa9_mB.burgdorferi-associated arthritis 9 (mouse)Not determined95780504771481754Mouse
4141676Neogq1_mneonatal growth QTL 1 (mouse)Not determined95780504786121973Mouse
1301803Stheal9_msoft tissue heal 9 (mouse)Not determined95902438793024534Mouse
1301172Fembrs6_mfemur breaking strength 6 (mouse)Not determined95902438793024534Mouse
1301456Adip5_madiposity 5 (mouse)Not determined95936994693370128Mouse
1300848Skull13_mskull morphology 13 (mouse)Not determined95936994693370128Mouse
5491195Mobq8_mmultigenic obesity QTL 8 (mouse)Not determined95936994693370128Mouse
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959897283109089068Mouse
1301611Lrnx3_mlearning contextual 3 (mouse)Not determined96214976796149881Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63239711120191934Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63239711120191934Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963239711120191934Mouse
11081165Psl6_mpromotion susceptibility QTL 6 (mouse)96504119195522808Mouse
1301290Smgd1_msubmucosal gland distribution 1 (mouse)Not determined96583105686577967Mouse
1301636Lith5_mlithogenic gene 5 (mouse)Not determined966089077100089175Mouse
10045638Heal29_mwound healing/regeneration 29 (mouse)Not determined967006220101006220Mouse
1357610Vtbt8_mvertebral trabecular bone trait 8 (mouse)Not determined968779563102779705Mouse
1301924Bmd10_mbone mineral density 10 (mouse)Not determined968779563102779705Mouse
1301302Pas4_mpulmonary adenoma susceptibility 4 (mouse)Not determined969121898103121973Mouse
10412174Habiir4_mhyperoxic acute lung injury imprinted region 4 (mouse)Not determined96926774798701707Mouse
1301621Hpic1_mhaloperidol-induced catalepsy 1 (mouse)Not determined969428566103428698Mouse
14700779Syncq8_msynovial calcification QTL 8 (mouse)96951428270692282Mouse

Markers in Region
AF035207  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38970,007,579 - 70,007,704UniSTSGRCm38
MGSCv37969,855,386 - 69,855,511UniSTSGRCm37
Celera967,224,033 - 67,224,158UniSTS
Cytogenetic Map9DUniSTS
Whitehead/MRC_RH9681.3UniSTS
Bnip2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9DUniSTS
Cytogenetic Map11B3UniSTS
cM Map939.15UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001008238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001374750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_016787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006510791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006510793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC137108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF035207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF071429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF400107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY489561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY591757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY591758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000034754   ⟹   ENSMUSP00000034754
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl969,896,748 - 69,915,599 (+)Ensembl
GRCm38.p6 Ensembl969,989,466 - 70,008,317 (+)Ensembl
RefSeq Acc Id: ENSMUST00000085393   ⟹   ENSMUSP00000082513
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl969,896,786 - 69,915,537 (+)Ensembl
GRCm38.p6 Ensembl969,989,504 - 70,008,255 (+)Ensembl
RefSeq Acc Id: ENSMUST00000117450   ⟹   ENSMUSP00000113466
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl969,896,797 - 69,911,289 (+)Ensembl
GRCm38.p6 Ensembl969,989,515 - 70,004,007 (+)Ensembl
RefSeq Acc Id: ENSMUST00000133307
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl969,905,514 - 69,910,919 (+)Ensembl
GRCm38.p6 Ensembl969,998,232 - 70,003,637 (+)Ensembl
RefSeq Acc Id: ENSMUST00000137472   ⟹   ENSMUSP00000115106
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl969,910,661 - 69,912,045 (+)Ensembl
GRCm38.p6 Ensembl970,003,379 - 70,004,763 (+)Ensembl
RefSeq Acc Id: ENSMUST00000143049
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl969,904,458 - 69,909,520 (+)Ensembl
GRCm38.p6 Ensembl969,997,176 - 70,002,238 (+)Ensembl
RefSeq Acc Id: ENSMUST00000154772   ⟹   ENSMUSP00000117957
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl969,896,799 - 69,906,440 (+)Ensembl
GRCm38.p6 Ensembl969,989,517 - 69,999,158 (+)Ensembl
RefSeq Acc Id: ENSMUST00000165389   ⟹   ENSMUSP00000133200
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl969,902,760 - 69,914,397 (+)Ensembl
GRCm38.p6 Ensembl969,995,478 - 70,007,115 (+)Ensembl
RefSeq Acc Id: NM_001008238   ⟹   NP_001008239
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39969,896,748 - 69,918,941 (+)NCBI
GRCm38969,989,466 - 70,011,659 (+)NCBI
MGSCv37969,837,308 - 69,856,124 (+)RGD
Celera967,205,894 - 67,228,113 (+)NCBI
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001374750   ⟹   NP_001361679
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39969,896,786 - 69,911,281 (+)NCBI
GRCm38969,989,504 - 70,003,999 (+)NCBI
Sequence:
RefSeq Acc Id: NM_016787   ⟹   NP_058067
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39969,896,748 - 69,918,941 (+)NCBI
GRCm38969,989,466 - 70,011,659 (+)NCBI
MGSCv37969,837,308 - 69,856,124 (+)RGD
Celera967,205,894 - 67,228,113 (+)NCBI
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006510791   ⟹   XP_006510854
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39969,896,660 - 69,915,539 (+)NCBI
GRCm38969,989,438 - 70,008,257 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006510793   ⟹   XP_006510856
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39969,896,660 - 69,915,539 (+)NCBI
GRCm38969,989,438 - 70,008,257 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036154575   ⟹   XP_036010468
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39969,896,788 - 69,915,539 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036154576   ⟹   XP_036010469
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39969,896,810 - 69,915,539 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036154577   ⟹   XP_036010470
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39969,896,881 - 69,915,539 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036154578   ⟹   XP_036010471
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39969,896,788 - 69,915,539 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001008239 (Get FASTA)   NCBI Sequence Viewer  
  NP_001361679 (Get FASTA)   NCBI Sequence Viewer  
  NP_058067 (Get FASTA)   NCBI Sequence Viewer  
  XP_006510854 (Get FASTA)   NCBI Sequence Viewer  
  XP_006510856 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010468 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010469 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010470 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010471 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC04329 (Get FASTA)   NCBI Sequence Viewer  
  AAH12670 (Get FASTA)   NCBI Sequence Viewer  
  AAM76082 (Get FASTA)   NCBI Sequence Viewer  
  AAT92039 (Get FASTA)   NCBI Sequence Viewer  
  AAT92040 (Get FASTA)   NCBI Sequence Viewer  
  BAB29492 (Get FASTA)   NCBI Sequence Viewer  
  BAC35718 (Get FASTA)   NCBI Sequence Viewer  
  BAE35338 (Get FASTA)   NCBI Sequence Viewer  
  BAE36200 (Get FASTA)   NCBI Sequence Viewer  
  BAE41257 (Get FASTA)   NCBI Sequence Viewer  
  EDL26177 (Get FASTA)   NCBI Sequence Viewer  
  EDL26178 (Get FASTA)   NCBI Sequence Viewer  
  EDL26179 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000034754
  ENSMUSP00000034754.6
  ENSMUSP00000082513
  ENSMUSP00000082513.7
  ENSMUSP00000113466
  ENSMUSP00000113466.2
  ENSMUSP00000115106.2
  ENSMUSP00000117957.2
  ENSMUSP00000133200.2
GenBank Protein O54940 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_058067   ⟸   NM_016787
- Peptide Label: isoform beta
- UniProtKB: Q8K4H0 (UniProtKB/Swiss-Prot),   O54940 (UniProtKB/Swiss-Prot),   Q9D632 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001008239   ⟸   NM_001008238
- Peptide Label: isoform alpha
- UniProtKB: Q91VL0 (UniProtKB/TrEMBL),   Q9D632 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006510854   ⟸   XM_006510791
- Peptide Label: isoform X1
- UniProtKB: Q9D632 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006510856   ⟸   XM_006510793
- Peptide Label: isoform X2
- UniProtKB: Q9D632 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001361679   ⟸   NM_001374750
- Peptide Label: isoform c
- UniProtKB: G5E8U9 (UniProtKB/TrEMBL),   Q9D632 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000082513   ⟸   ENSMUST00000085393
RefSeq Acc Id: ENSMUSP00000034754   ⟸   ENSMUST00000034754
RefSeq Acc Id: ENSMUSP00000133200   ⟸   ENSMUST00000165389
RefSeq Acc Id: ENSMUSP00000117957   ⟸   ENSMUST00000154772
RefSeq Acc Id: ENSMUSP00000115106   ⟸   ENSMUST00000137472
RefSeq Acc Id: ENSMUSP00000113466   ⟸   ENSMUST00000117450
RefSeq Acc Id: XP_036010468   ⟸   XM_036154575
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036010471   ⟸   XM_036154578
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036010469   ⟸   XM_036154576
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036010470   ⟸   XM_036154577
- Peptide Label: isoform X3
Protein Domains
CRAL-TRIO

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O54940-F1-model_v2 AlphaFold O54940 1-326 view protein structure

Promoters
RGD ID:6844252
Promoter ID:MM_KWN:57955
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000076381,   OTTMUST00000076384,   UC009QNK.1,   UC009QNM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36969,837,006 - 69,837,506 (+)MPROMDB
RGD ID:6844254
Promoter ID:MM_KWN:57956
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour
Transcripts:UC009QNN.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36969,842,241 - 69,842,892 (+)MPROMDB
RGD ID:6844121
Promoter ID:MM_KWN:57960
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B6
Transcripts:UC009QNO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36969,856,171 - 69,859,272 (+)MPROMDB
RGD ID:8670078
Promoter ID:EPDNEW_M13070
Type:initiation region
Name:Bnip2_1
Description:Mus musculus BCL2/adenovirus E1B interacting protein 2 , transcriptvariant alpha, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38969,989,515 - 69,989,575EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:109327 AgrOrtholog
Ensembl Genes ENSMUSG00000011958 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000034754 ENTREZGENE
  ENSMUST00000034754.12 UniProtKB/Swiss-Prot
  ENSMUST00000085393 ENTREZGENE
  ENSMUST00000085393.13 UniProtKB/TrEMBL
  ENSMUST00000117450 ENTREZGENE
  ENSMUST00000117450.8 UniProtKB/TrEMBL
  ENSMUST00000137472.2 UniProtKB/TrEMBL
  ENSMUST00000154772.8 UniProtKB/TrEMBL
  ENSMUST00000165389.8 UniProtKB/TrEMBL
Gene3D-CATH 3.40.525.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Bcl2-/adenovirus-E1B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CRAL-TRIO_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CRAL-TRIO_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12175 UniProtKB/Swiss-Prot
MGD MGI:109327 ENTREZGENE
NCBI Gene 12175 ENTREZGENE
PANTHER BCL2/ADENOVIRUS E1B 19 KDA PROTEIN-INTERACTING PROTEIN 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BNIP - RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BNIP2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CRAL_TRIO_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Bnip2 PhenoGen
PROSITE CRAL_TRIO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SEC14 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52087 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt BNIP2_MOUSE UniProtKB/Swiss-Prot
  D6RE50_MOUSE UniProtKB/TrEMBL
  F6VF29_MOUSE UniProtKB/TrEMBL
  G5E8U9 ENTREZGENE, UniProtKB/TrEMBL
  O54940 ENTREZGENE
  Q3TTX3_MOUSE UniProtKB/TrEMBL
  Q3TWC8_MOUSE UniProtKB/TrEMBL
  Q8K4H0 ENTREZGENE
  Q91VL0 ENTREZGENE, UniProtKB/TrEMBL
  Q9D632 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q8K4H0 UniProtKB/Swiss-Prot