ZRANB1 (zinc finger RANBP2-type containing 1) - Rat Genome Database

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Gene: ZRANB1 (zinc finger RANBP2-type containing 1) Homo sapiens
Analyze
Symbol: ZRANB1
Name: zinc finger RANBP2-type containing 1
RGD ID: 1318817
HGNC Page HGNC:18224
Description: Enables K63-linked polyubiquitin modification-dependent protein binding activity and cysteine-type deubiquitinase activity. Involved in several processes, including positive regulation of Wnt signaling pathway; protein deubiquitination; and regulation of cell morphogenesis. Located in cytosol and nucleoplasm. Is active in cytoplasm and nucleus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: DKFZp762P2216; hTrabid; RP11-298J20.4; TRABID; TRAF-binding domain-containing protein; TRAF-binding protein domain; ubiquitin thioesterase ZRANB1; zinc finger Ran-binding domain-containing protein 1; zinc finger, RAN-binding domain containing 1
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810124,916,894 - 124,988,189 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10124,942,123 - 124,988,189 (+)EnsemblGRCh38hg38GRCh38
GRCh3710126,630,692 - 126,676,758 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610126,620,682 - 126,665,995 (+)NCBINCBI36Build 36hg18NCBI36
Build 3410126,620,681 - 126,663,759NCBI
Celera10120,404,500 - 120,449,814 (+)NCBICelera
Cytogenetic Map10q26.13NCBI
HuRef10120,317,070 - 120,363,002 (+)NCBIHuRef
CHM1_110126,912,463 - 126,957,768 (+)NCBICHM1_1
T2T-CHM13v2.010125,823,167 - 125,869,209 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IDA,IEA)
cytosol  (IDA,TAS)
intracellular membrane-bounded organelle  (IDA)
nucleoplasm  (IDA)
nucleus  (IBA,IDA,IEA)

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11463333   PMID:12477932   PMID:18029348   PMID:18281465   PMID:19373254   PMID:19615732   PMID:20622874   PMID:21834987   PMID:21873635   PMID:22157957   PMID:22658674   PMID:23277359  
PMID:23827681   PMID:24768539   PMID:25429064   PMID:25527291   PMID:25752573   PMID:25752577   PMID:26186194   PMID:28190767   PMID:28514442   PMID:28611215   PMID:29507755   PMID:29669287  
PMID:29748601   PMID:30021006   PMID:30686098   PMID:31911859   PMID:32296183   PMID:32694731   PMID:33637724   PMID:33711283   PMID:33853758   PMID:33961781   PMID:34597346   PMID:34765294  
PMID:34798260   PMID:35906200   PMID:35915203   PMID:35944360   PMID:36217029   PMID:36949045   PMID:37002234   PMID:37831441   PMID:38099646   PMID:38870935  


Genomics

Comparative Map Data
ZRANB1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810124,916,894 - 124,988,189 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10124,942,123 - 124,988,189 (+)EnsemblGRCh38hg38GRCh38
GRCh3710126,630,692 - 126,676,758 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610126,620,682 - 126,665,995 (+)NCBINCBI36Build 36hg18NCBI36
Build 3410126,620,681 - 126,663,759NCBI
Celera10120,404,500 - 120,449,814 (+)NCBICelera
Cytogenetic Map10q26.13NCBI
HuRef10120,317,070 - 120,363,002 (+)NCBIHuRef
CHM1_110126,912,463 - 126,957,768 (+)NCBICHM1_1
T2T-CHM13v2.010125,823,167 - 125,869,209 (+)NCBIT2T-CHM13v2.0
Zranb1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397132,532,905 - 132,588,127 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7132,532,871 - 132,588,120 (+)EnsemblGRCm39 Ensembl
GRCm387132,931,176 - 132,986,398 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7132,931,142 - 132,986,391 (+)EnsemblGRCm38mm10GRCm38
MGSCv377140,141,305 - 140,175,634 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367132,787,965 - 132,822,294 (+)NCBIMGSCv36mm8
Celera7132,755,614 - 132,789,937 (+)NCBICelera
Cytogenetic Map7F3NCBI
cM Map776.32NCBI
Zranb1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81197,155,048 - 197,211,518 (+)NCBIGRCr8
mRatBN7.21187,725,354 - 187,780,129 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1187,724,320 - 187,779,655 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01204,938,444 - 205,000,163 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1204,959,174 - 204,998,019 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01211,931,252 - 211,991,353 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41192,458,649 - 192,461,208 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1185,469,920 - 185,525,817 (+)NCBICelera
Cytogenetic Map1q41NCBI
Zranb1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554772,873,170 - 2,922,069 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554772,864,737 - 2,922,069 (+)NCBIChiLan1.0ChiLan1.0
ZRANB1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28136,766,528 - 136,837,960 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110136,772,160 - 136,843,311 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010121,477,916 - 121,549,296 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110125,766,209 - 125,814,015 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10125,766,178 - 125,814,768 (+)Ensemblpanpan1.1panPan2
ZRANB1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12834,220,596 - 34,259,642 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2834,220,596 - 34,256,620 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2834,264,304 - 34,321,513 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02834,759,763 - 34,817,033 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2834,718,820 - 34,814,205 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12834,316,924 - 34,374,155 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02834,308,002 - 34,365,164 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02834,560,074 - 34,617,303 (+)NCBIUU_Cfam_GSD_1.0
Zranb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721312,390,881 - 12,439,746 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648613,135,740 - 13,170,462 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648613,135,759 - 13,170,462 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZRANB1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14134,254,000 - 134,329,064 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114134,253,927 - 134,327,835 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214145,804,215 - 145,880,481 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZRANB1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19117,561,468 - 117,634,226 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl9117,561,226 - 117,631,817 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604878,918,277 - 78,989,747 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zranb1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473722,165,011 - 22,228,635 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473722,168,025 - 22,228,990 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZRANB1
26 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 10q25.2-26.3(chr10:111313099-133620674)x3 copy number gain See cases [RCV000051218] Chr10:111313099..133620674 [GRCh38]
Chr10:113072857..135434178 [GRCh37]
Chr10:113062847..135284168 [NCBI36]
Chr10:10q25.2-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:123307835-133620674)x1 copy number loss See cases [RCV000051150] Chr10:123307835..133620674 [GRCh38]
Chr10:125067351..135434178 [GRCh37]
Chr10:125057341..135284168 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.12-26.3(chr10:120454430-133620674)x1 copy number loss See cases [RCV000051103] Chr10:120454430..133620674 [GRCh38]
Chr10:122213942..135434178 [GRCh37]
Chr10:122203932..135284168 [NCBI36]
Chr10:10q26.12-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:122265252-133620674)x1 copy number loss See cases [RCV000051069] Chr10:122265252..133620674 [GRCh38]
Chr10:124024767..135434178 [GRCh37]
Chr10:124014757..135284168 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.2(chr10:122826743-126730948)x1 copy number loss See cases [RCV000052609] Chr10:122826743..126730948 [GRCh38]
Chr10:124586259..128419517 [GRCh37]
Chr10:124576249..128409507 [NCBI36]
Chr10:10q26.13-26.2		 pathogenic
GRCh38/hg38 10q26.13-26.2(chr10:122973296-128210291)x1 copy number loss See cases [RCV000052610] Chr10:122973296..128210291 [GRCh38]
Chr10:124732812..130008555 [GRCh37]
Chr10:124722802..129898545 [NCBI36]
Chr10:10q26.13-26.2		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:123580320-133558988)x1 copy number loss See cases [RCV000052611] Chr10:123580320..133558988 [GRCh38]
Chr10:125339836..135372492 [GRCh37]
Chr10:125329826..135222482 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q23.31-26.3(chr10:91048545-133620674)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053560]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053560]|See cases [RCV000053560] Chr10:91048545..133620674 [GRCh38]
Chr10:92808302..135434178 [GRCh37]
Chr10:92798282..135284168 [NCBI36]
Chr10:10q23.31-26.3		 pathogenic
GRCh38/hg38 10q24.31-26.3(chr10:100194215-132432797)x3 copy number gain See cases [RCV000053564] Chr10:100194215..132432797 [GRCh38]
Chr10:101953972..134246301 [GRCh37]
Chr10:101943962..134096291 [NCBI36]
Chr10:10q24.31-26.3		 pathogenic
GRCh38/hg38 10q25.1-26.3(chr10:106925303-133620815)x3 copy number gain See cases [RCV000053588] Chr10:106925303..133620815 [GRCh38]
Chr10:108685061..135434319 [GRCh37]
Chr10:108675051..135284309 [NCBI36]
Chr10:10q25.1-26.3		 pathogenic
GRCh38/hg38 10q26.11-26.3(chr10:117866565-133554210)x3 copy number gain See cases [RCV000053589] Chr10:117866565..133554210 [GRCh38]
Chr10:119626076..135367714 [GRCh37]
Chr10:119616066..135217704 [NCBI36]
Chr10:10q26.11-26.3		 pathogenic
NM_017580.2(ZRANB1):c.815-8533A>G single nucleotide variant Lung cancer [RCV000108771] Chr10:124958061 [GRCh38]
Chr10:126646630 [GRCh37]
Chr10:10q26.13		 uncertain significance
GRCh38/hg38 10q25.1-26.3(chr10:108102587-133620674)x3 copy number gain See cases [RCV000133688] Chr10:108102587..133620674 [GRCh38]
Chr10:109862345..135434178 [GRCh37]
Chr10:109852335..135284168 [NCBI36]
Chr10:10q25.1-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:124473108-133620609)x1 copy number loss See cases [RCV000136028] Chr10:124473108..133620609 [GRCh38]
Chr10:126161677..135434113 [GRCh37]
Chr10:126151667..135284103 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.2(chr10:124032888-127368827)x3 copy number gain See cases [RCV000136887] Chr10:124032888..127368827 [GRCh38]
Chr10:125792404..129167091 [GRCh37]
Chr10:125782394..129057081 [NCBI36]
Chr10:10q26.13-26.2		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:124834858-133622588)x1 copy number loss See cases [RCV000137653] Chr10:124834858..133622588 [GRCh38]
Chr10:126523427..135436092 [GRCh37]
Chr10:126513417..135286082 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.2(chr10:124912981-125968614)x1 copy number loss See cases [RCV000138151] Chr10:124912981..125968614 [GRCh38]
Chr10:126601550..127657183 [GRCh37]
Chr10:126591540..127647173 [NCBI36]
Chr10:10q26.13-26.2		 pathogenic
GRCh38/hg38 10q24.31-26.3(chr10:100600492-133622588)x3 copy number gain See cases [RCV000137747] Chr10:100600492..133622588 [GRCh38]
Chr10:102360249..135436092 [GRCh37]
Chr10:102350239..135286082 [NCBI36]
Chr10:10q24.31-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:122881207-133620609)x1 copy number loss See cases [RCV000138435] Chr10:122881207..133620609 [GRCh38]
Chr10:124640723..135434113 [GRCh37]
Chr10:124630713..135284103 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.12-26.3(chr10:120970558-133622588)x1 copy number loss See cases [RCV000139344] Chr10:120970558..133622588 [GRCh38]
Chr10:122730071..135436092 [GRCh37]
Chr10:122720061..135286082 [NCBI36]
Chr10:10q26.12-26.3		 pathogenic
GRCh38/hg38 10q26.11-26.3(chr10:119707856-133613639)x3 copy number gain See cases [RCV000142005] Chr10:119707856..133613639 [GRCh38]
Chr10:121467368..135427143 [GRCh37]
Chr10:121457358..135277133 [NCBI36]
Chr10:10q26.11-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:121588992-133620674)x1 copy number loss See cases [RCV000142441] Chr10:121588992..133620674 [GRCh38]
Chr10:123348506..135434178 [GRCh37]
Chr10:123338496..135284168 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:121918547-133620674)x1 copy number loss See cases [RCV000142737] Chr10:121918547..133620674 [GRCh38]
Chr10:123678062..135434178 [GRCh37]
Chr10:123668052..135284168 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:123986772-133613639)x1 copy number loss See cases [RCV000143623] Chr10:123986772..133613639 [GRCh38]
Chr10:125746288..135427143 [GRCh37]
Chr10:125736278..135277133 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:123576393-133613639)x1 copy number loss See cases [RCV000143544] Chr10:123576393..133613639 [GRCh38]
Chr10:125335909..135427143 [GRCh37]
Chr10:125325899..135277133 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.2(chr10:122239239-128203032)x1 copy number loss See cases [RCV000240153] Chr10:122239239..128203032 [GRCh37]
Chr10:10q26.12-26.2		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:123731209-135353867)x1 copy number loss See cases [RCV000203440] Chr10:123731209..135353867 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic|likely pathogenic
GRCh37/hg19 10q24.32-26.3(chr10:103288313-135512075)x3 copy number gain See cases [RCV000240457] Chr10:103288313..135512075 [GRCh37]
Chr10:10q24.32-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:122125760-135062972)x3 copy number gain See cases [RCV000449169] Chr10:122125760..135062972 [GRCh37]
Chr10:10q26.12-26.3		 likely pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:124147428-135370736)x1 copy number loss See cases [RCV000449336] Chr10:124147428..135370736 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q24.32-26.3(chr10:104633712-135427143)x3 copy number gain See cases [RCV000449386] Chr10:104633712..135427143 [GRCh37]
Chr10:10q24.32-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:122343861-135427143)x1 copy number loss See cases [RCV000446095] Chr10:122343861..135427143 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
GRCh37/hg19 10q24.2-26.3(chr10:100780957-135427143)x3 copy number gain See cases [RCV000446733] Chr10:100780957..135427143 [GRCh37]
Chr10:10q24.2-26.3		 pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:93297-135378918)x3 copy number gain See cases [RCV000448750] Chr10:93297..135378918 [GRCh37]
Chr10:10p15.3-q26.3		 pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143) copy number gain See cases [RCV000511389] Chr10:100027..135427143 [GRCh37]
Chr10:10p15.3-q26.3		 pathogenic|uncertain significance
GRCh37/hg19 10q25.1-26.3(chr10:106003533-135427143)x3 copy number gain See cases [RCV000510813] Chr10:106003533..135427143 [GRCh37]
Chr10:10q25.1-26.3		 pathogenic
GRCh37/hg19 10q23.32-26.3(chr10:93283493-135427143)x3 copy number gain See cases [RCV000510972] Chr10:93283493..135427143 [GRCh37]
Chr10:10q23.32-26.3		 pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143)x3 copy number gain See cases [RCV000510861] Chr10:100027..135427143 [GRCh37]
Chr10:10p15.3-q26.3		 pathogenic
NM_017580.3(ZRANB1):c.2071C>T (p.Arg691Trp) single nucleotide variant not specified [RCV004325264] Chr10:124984936 [GRCh38]
Chr10:126673505 [GRCh37]
Chr10:10q26.13		 uncertain significance
GRCh37/hg19 10q11.21-26.3(chr10:42347406-135534747)x1 copy number loss Poly (ADP-Ribose) polymerase inhibitor response [RCV000626438] Chr10:42347406..135534747 [GRCh37]
Chr10:10q11.21-26.3		 drug response
GRCh37/hg19 10q26.13-26.2(chr10:126652011-128433378)x3 copy number gain not provided [RCV000683267] Chr10:126652011..128433378 [GRCh37]
Chr10:10q26.13-26.2		 uncertain significance
GRCh37/hg19 10q26.13(chr10:126319221-126733607)x3 copy number gain not provided [RCV000683234] Chr10:126319221..126733607 [GRCh37]
Chr10:10q26.13		 uncertain significance
GRCh37/hg19 10q26.13-26.3(chr10:125450893-135427143)x1 copy number loss not provided [RCV000683285] Chr10:125450893..135427143 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:123019239-135427143)x1 copy number loss not provided [RCV000683286] Chr10:123019239..135427143 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
GRCh37/hg19 10q26.11-26.3(chr10:121269222-135427143)x3 copy number gain not provided [RCV000683288] Chr10:121269222..135427143 [GRCh37]
Chr10:10q26.11-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:122509781-135427143)x1 copy number loss not provided [RCV000683287] Chr10:122509781..135427143 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
GRCh37/hg19 10q24.33-26.3(chr10:105613040-135427143)x3 copy number gain not provided [RCV000683290] Chr10:105613040..135427143 [GRCh37]
Chr10:10q24.33-26.3		 pathogenic
GRCh37/hg19 10q23.33-26.3(chr10:94346520-135427143)x3 copy number gain not provided [RCV000683291] Chr10:94346520..135427143 [GRCh37]
Chr10:10q23.33-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:122443197-135477883)x1 copy number loss not provided [RCV000737305] Chr10:122443197..135477883 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:98087-135477883)x3 copy number gain not provided [RCV000749465] Chr10:98087..135477883 [GRCh37]
Chr10:10p15.3-q26.3		 pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:73232-135524321)x3 copy number gain not provided [RCV000749464] Chr10:73232..135524321 [GRCh37]
Chr10:10p15.3-q26.3		 pathogenic
GRCh37/hg19 10q25.1-26.3(chr10:110022170-135439095) copy number gain not provided [RCV000767665] Chr10:110022170..135439095 [GRCh37]
Chr10:10q25.1-26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:124988334-135427143)x3 copy number gain not provided [RCV000848791] Chr10:124988334..135427143 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q25.2-26.3(chr10:114544537-135427143)x3 copy number gain not provided [RCV000847820] Chr10:114544537..135427143 [GRCh37]
Chr10:10q25.2-26.3		 pathogenic
GRCh37/hg19 10q26.11-26.3(chr10:119996339-135427143)x3 copy number gain not provided [RCV001006356] Chr10:119996339..135427143 [GRCh37]
Chr10:10q26.11-26.3		 pathogenic
NM_017580.3(ZRANB1):c.1572G>T (p.Thr524=) single nucleotide variant not provided [RCV000896395] Chr10:124983198 [GRCh38]
Chr10:126671767 [GRCh37]
Chr10:10q26.13		 benign
GRCh37/hg19 10q25.3-26.3(chr10:118247181-135435319)x3 copy number gain not provided [RCV001537903] Chr10:118247181..135435319 [GRCh37]
Chr10:10q25.3-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:122785023-135457222)x1 copy number loss See cases [RCV001526488] Chr10:122785023..135457222 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:123477898-135427143) copy number loss Distal 10q deletion syndrome [RCV003319590] Chr10:123477898..135427143 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q26.13(chr10:125920216-126732932) copy number loss not specified [RCV002052897] Chr10:125920216..126732932 [GRCh37]
Chr10:10q26.13		 uncertain significance
GRCh37/hg19 10q26.12-26.3(chr10:122125760-135062972) copy number gain not specified [RCV002052894] Chr10:122125760..135062972 [GRCh37]
Chr10:10q26.12-26.3		 likely pathogenic
GRCh37/hg19 10q25.1-26.3(chr10:108455687-135427143) copy number gain not specified [RCV002052891] Chr10:108455687..135427143 [GRCh37]
Chr10:10q25.1-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:122343861-135427143) copy number loss not specified [RCV002052895] Chr10:122343861..135427143 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
NM_017580.3(ZRANB1):c.1159A>G (p.Ile387Val) single nucleotide variant not specified [RCV004281777] Chr10:124973647 [GRCh38]
Chr10:126662216 [GRCh37]
Chr10:10q26.13		 uncertain significance
Single allele duplication not specified [RCV002286381] Chr10:124920875..125841697 [GRCh38]
Chr10:10q26.13-26.2		 uncertain significance
GRCh37/hg19 10q26.13-26.3(chr10:126662496-133985966)x3 copy number gain not provided [RCV002474692] Chr10:126662496..133985966 [GRCh37]
Chr10:10q26.13-26.3		 uncertain significance
NM_017580.3(ZRANB1):c.988A>G (p.Ile330Val) single nucleotide variant not specified [RCV004219930] Chr10:124966767 [GRCh38]
Chr10:126655336 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.1118A>G (p.Tyr373Cys) single nucleotide variant not specified [RCV004224400] Chr10:124972080 [GRCh38]
Chr10:126660649 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.2008C>T (p.Arg670Trp) single nucleotide variant not specified [RCV004238362] Chr10:124984873 [GRCh38]
Chr10:126673442 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.489G>C (p.Trp163Cys) single nucleotide variant not specified [RCV004155015] Chr10:124942982 [GRCh38]
Chr10:126631551 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.533A>G (p.Asn178Ser) single nucleotide variant not specified [RCV004237087] Chr10:124943026 [GRCh38]
Chr10:126631595 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.542A>G (p.Glu181Gly) single nucleotide variant not specified [RCV004097356] Chr10:124943035 [GRCh38]
Chr10:126631604 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.272A>G (p.His91Arg) single nucleotide variant not specified [RCV004119239] Chr10:124942765 [GRCh38]
Chr10:126631334 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.245T>A (p.Met82Lys) single nucleotide variant not specified [RCV004178213] Chr10:124942738 [GRCh38]
Chr10:126631307 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.2005C>T (p.Arg669Trp) single nucleotide variant not specified [RCV004110795] Chr10:124984870 [GRCh38]
Chr10:126673439 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.664C>T (p.Arg222Trp) single nucleotide variant not specified [RCV004118807] Chr10:124943157 [GRCh38]
Chr10:126631726 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.1122T>G (p.Phe374Leu) single nucleotide variant not specified [RCV004180551] Chr10:124972084 [GRCh38]
Chr10:126660653 [GRCh37]
Chr10:10q26.13		 uncertain significance
GRCh37/hg19 10q26.12-26.3(chr10:122610933-135439810)x1 copy number loss not provided [RCV003222684] Chr10:122610933..135439810 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
NM_017580.3(ZRANB1):c.1796A>G (p.Asn599Ser) single nucleotide variant not specified [RCV004257677] Chr10:124983576 [GRCh38]
Chr10:126672145 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.580A>G (p.Ile194Val) single nucleotide variant not specified [RCV004265390] Chr10:124943073 [GRCh38]
Chr10:126631642 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.989T>C (p.Ile330Thr) single nucleotide variant not specified [RCV004267734] Chr10:124966768 [GRCh38]
Chr10:126655337 [GRCh37]
Chr10:10q26.13		 uncertain significance
GRCh37/hg19 10p14-q26.3(chr10:11138692-135427143) copy number gain Distal trisomy 10q [RCV003319593] Chr10:11138692..135427143 [GRCh37]
Chr10:10p14-q26.3		 pathogenic
GRCh37/hg19 10p13-q26.3(chr10:12829206-135427143) copy number loss Distal 10q deletion syndrome [RCV003319583] Chr10:12829206..135427143 [GRCh37]
Chr10:10p13-q26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:124895517-135440296)x1 copy number loss Distal 10q deletion syndrome [RCV003329543] Chr10:124895517..135440296 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
NM_017580.3(ZRANB1):c.1178C>G (p.Thr393Arg) single nucleotide variant not specified [RCV004365220] Chr10:124973666 [GRCh38]
Chr10:126662235 [GRCh37]
Chr10:10q26.13		 uncertain significance
GRCh37/hg19 10q25.1-26.3(chr10:111378692-135427143)x3 copy number gain Distal trisomy 10q [RCV003458955] Chr10:111378692..135427143 [GRCh37]
Chr10:10q25.1-26.3		 pathogenic
GRCh37/hg19 10q25.1-26.3(chr10:111447991-133435388)x3 copy number gain not provided [RCV003484817] Chr10:111447991..133435388 [GRCh37]
Chr10:10q25.1-26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:125987494-135427143)x1 copy number loss not specified [RCV003986904] Chr10:125987494..135427143 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:126127397-135427143)x1 copy number loss not specified [RCV003986878] Chr10:126127397..135427143 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q23.33-26.3(chr10:95078198-135427143)x3 copy number gain not specified [RCV003986893] Chr10:95078198..135427143 [GRCh37]
Chr10:10q23.33-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:122331280-135426386)x1 copy number loss not provided [RCV004442821] Chr10:122331280..135426386 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
NM_017580.3(ZRANB1):c.385C>T (p.Pro129Ser) single nucleotide variant not specified [RCV004487614] Chr10:124942878 [GRCh38]
Chr10:126631447 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.665G>A (p.Arg222Gln) single nucleotide variant not specified [RCV004487616] Chr10:124943158 [GRCh38]
Chr10:126631727 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.889G>A (p.Ala297Thr) single nucleotide variant not specified [RCV004487618] Chr10:124966668 [GRCh38]
Chr10:126655237 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.802A>C (p.Asn268His) single nucleotide variant not specified [RCV004487617] Chr10:124943295 [GRCh38]
Chr10:126631864 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.659C>T (p.Thr220Met) single nucleotide variant not specified [RCV004487615] Chr10:124943152 [GRCh38]
Chr10:126631721 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.1030C>A (p.Pro344Thr) single nucleotide variant not specified [RCV004603800] Chr10:124971992 [GRCh38]
Chr10:126660561 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.1840A>G (p.Ile614Val) single nucleotide variant not specified [RCV004603801] Chr10:124983620 [GRCh38]
Chr10:126672189 [GRCh37]
Chr10:10q26.13		 uncertain significance
NM_017580.3(ZRANB1):c.1858G>T (p.Val620Phe) single nucleotide variant not specified [RCV004603803] Chr10:124983638 [GRCh38]
Chr10:126672207 [GRCh37]
Chr10:10q26.13		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1237
Count of miRNA genes:781
Interacting mature miRNAs:890
Transcripts:ENST00000359653, ENST00000471421
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407020354GWAS669330_Hbody height QTL GWAS669330 (human)2e-14body height (VT:0001253)body height (CMO:0000106)10124983104124983105Human
407099361GWAS748337_Herythrocyte count QTL GWAS748337 (human)6e-13erythrocyte countred blood cell count (CMO:0000025)10124969506124969507Human
407189542GWAS838518_Hglomerular filtration rate QTL GWAS838518 (human)2e-10glomerular filtration rateglomerular filtration rate (CMO:0000490)10124975597124975598Human
407313315GWAS962291_Hage-related hearing impairment QTL GWAS962291 (human)1e-08age-related hearing impairment10124938711124938712Human
407331552GWAS980528_Hbody weight QTL GWAS980528 (human)2e-16body mass (VT:0001259)body weight (CMO:0000012)10124941039124941040Human
407205133GWAS854109_Hbody mass index QTL GWAS854109 (human)8e-10body mass indexbody mass index (BMI) (CMO:0000105)10124928251124928252Human
407020811GWAS669787_Hbody height QTL GWAS669787 (human)5e-25body height (VT:0001253)body height (CMO:0000106)10124960438124960439Human
407204718GWAS853694_Hlung cancer QTL GWAS853694 (human)0.000001lung cancer10124961380124961381Human
407282762GWAS931738_Hbody height QTL GWAS931738 (human)5e-103body height (VT:0001253)body height (CMO:0000106)10124960438124960439Human
406948364GWAS597340_Hbody mass index QTL GWAS597340 (human)1e-09body mass indexbody mass index (BMI) (CMO:0000105)10124919170124919171Human
407143945GWAS792921_Hcreatine kinase measurement QTL GWAS792921 (human)4e-08creatine kinase measurementblood creatine kinase activity level (CMO:0002242)10124922340124922341Human
407070029GWAS719005_Hblood urea nitrogen measurement QTL GWAS719005 (human)1e-08blood urea nitrogen measurementblood urea nitrogen level (CMO:0000049)10124975597124975598Human
407282761GWAS931737_Hbody height QTL GWAS931737 (human)3e-21body height (VT:0001253)body height (CMO:0000106)10124928600124928601Human
406934446GWAS583422_Heducational attainment QTL GWAS583422 (human)1e-10red blood cell density measurement10124969506124969507Human
406992755GWAS641731_Hbody mass index QTL GWAS641731 (human)4e-10body mass indexbody mass index (BMI) (CMO:0000105)10124919170124919171Human
407321430GWAS970406_Hbody mass index QTL GWAS970406 (human)1e-09body mass indexbody mass index (BMI) (CMO:0000105)10124941039124941040Human
406965682GWAS614658_Hage at menopause QTL GWAS614658 (human)1e-47age at menopause10124969506124969507Human
407063892GWAS712868_Hred blood cell density measurement QTL GWAS712868 (human)4e-13age at menopause10124969506124969507Human
407306367GWAS955343_Hfat body mass QTL GWAS955343 (human)2e-09body fat mass (VT:0010482)total body fat mass (CMO:0000305)10124941039124941040Human
407049529GWAS698505_Hbody height QTL GWAS698505 (human)0.0000002body height (VT:0001253)body height (CMO:0000106)10124960947124960948Human
407109596GWAS758572_Hbody height QTL GWAS758572 (human)8e-14body height (VT:0001253)body height (CMO:0000106)10124960438124960439Human

Markers in Region
STS-H24463  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710126,675,651 - 126,675,898UniSTSGRCh37
Build 3610126,665,641 - 126,665,888RGDNCBI36
Celera10120,449,460 - 120,449,707RGD
Cytogenetic Map10q26.13UniSTS
HuRef10120,362,648 - 120,362,895UniSTS
GeneMap99-GB4 RH Map10548.52UniSTS
SGC38118  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710126,639,845 - 126,640,105UniSTSGRCh37
Build 3610126,629,835 - 126,630,095RGDNCBI36
Celera10120,413,652 - 120,413,912RGD
Cytogenetic Map10q26.13UniSTS
HuRef10120,326,300 - 120,326,560UniSTS
GeneMap99-GB4 RH Map10547.73UniSTS
Whitehead-RH Map10654.8UniSTS
SHGC-30414  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710126,675,104 - 126,675,253UniSTSGRCh37
Build 3610126,665,094 - 126,665,243RGDNCBI36
Celera10120,448,911 - 120,449,060RGD
Cytogenetic Map10q26.13UniSTS
HuRef10120,362,099 - 120,362,248UniSTS
Stanford-G3 RH Map106045.0UniSTS
GeneMap99-GB4 RH Map10548.52UniSTS
Whitehead-RH Map10654.7UniSTS
NCBI RH Map101358.5UniSTS
GeneMap99-G3 RH Map106281.0UniSTS
SHGC-36008  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710126,675,869 - 126,675,969UniSTSGRCh37
Build 3610126,665,859 - 126,665,959RGDNCBI36
Celera10120,449,678 - 120,449,778RGD
Cytogenetic Map10q26.13UniSTS
HuRef10120,362,866 - 120,362,966UniSTS
GeneMap99-G3 RH Map106281.0UniSTS
RH47020  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710126,674,826 - 126,675,001UniSTSGRCh37
Build 3610126,664,816 - 126,664,991RGDNCBI36
Celera10120,448,633 - 120,448,808RGD
Cytogenetic Map10q26.13UniSTS
HuRef10120,361,825 - 120,361,996UniSTS
GeneMap99-GB4 RH Map10547.83UniSTS
SHGC-36286  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710126,674,059 - 126,674,162UniSTSGRCh37
Build 3610126,664,049 - 126,664,152RGDNCBI36
Celera10120,447,866 - 120,447,969RGD
Cytogenetic Map10q26.13UniSTS
HuRef10120,361,057 - 120,361,160UniSTS
GeneMap99-G3 RH Map106272.0UniSTS


Sequence


Ensembl Acc Id: ENST00000359653   ⟹   ENSP00000352676
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10124,942,123 - 124,988,189 (+)Ensembl
Ensembl Acc Id: ENST00000471421
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10124,981,411 - 124,983,496 (+)Ensembl
RefSeq Acc Id: NM_017580   ⟹   NP_060050
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810124,942,123 - 124,988,189 (+)NCBI
GRCh3710126,605,704 - 126,676,005 (+)NCBI
Build 3610126,620,682 - 126,665,995 (+)NCBI Archive
Celera10120,404,500 - 120,449,814 (+)RGD
HuRef10120,317,070 - 120,363,002 (+)RGD
CHM1_110126,912,463 - 126,957,768 (+)NCBI
T2T-CHM13v2.010125,823,167 - 125,869,209 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006717907   ⟹   XP_006717970
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810124,916,894 - 124,988,189 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047425383   ⟹   XP_047281339
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810124,916,894 - 124,988,189 (+)NCBI
RefSeq Acc Id: XM_047425384   ⟹   XP_047281340
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810124,917,513 - 124,988,189 (+)NCBI
RefSeq Acc Id: XM_047425385   ⟹   XP_047281341
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810124,927,250 - 124,988,189 (+)NCBI
RefSeq Acc Id: XR_007061968
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810124,933,396 - 124,981,794 (+)NCBI
RefSeq Acc Id: NP_060050   ⟸   NM_017580
- UniProtKB: Q5SQP6 (UniProtKB/Swiss-Prot),   D3DRF4 (UniProtKB/Swiss-Prot),   B4DZ98 (UniProtKB/Swiss-Prot),   Q69YK3 (UniProtKB/Swiss-Prot),   Q9UGI0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006717970   ⟸   XM_006717907
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSP00000352676   ⟸   ENST00000359653
RefSeq Acc Id: XP_047281339   ⟸   XM_047425383
- Peptide Label: isoform X2
- UniProtKB: Q9UGI0 (UniProtKB/Swiss-Prot),   Q5SQP6 (UniProtKB/Swiss-Prot),   D3DRF4 (UniProtKB/Swiss-Prot),   B4DZ98 (UniProtKB/Swiss-Prot),   Q69YK3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047281340   ⟸   XM_047425384
- Peptide Label: isoform X2
- UniProtKB: Q9UGI0 (UniProtKB/Swiss-Prot),   Q5SQP6 (UniProtKB/Swiss-Prot),   D3DRF4 (UniProtKB/Swiss-Prot),   B4DZ98 (UniProtKB/Swiss-Prot),   Q69YK3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047281341   ⟸   XM_047425385
- Peptide Label: isoform X2
- UniProtKB: Q9UGI0 (UniProtKB/Swiss-Prot),   Q5SQP6 (UniProtKB/Swiss-Prot),   D3DRF4 (UniProtKB/Swiss-Prot),   B4DZ98 (UniProtKB/Swiss-Prot),   Q69YK3 (UniProtKB/Swiss-Prot)
Protein Domains
OTU

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9UGI0-F1-model_v2 AlphaFold Q9UGI0 1-708 view protein structure

Promoters
RGD ID:7218949
Promoter ID:EPDNEW_H15221
Type:initiation region
Name:ZRANB1_1
Description:zinc finger RANBP2-type containing 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810124,917,172 - 124,917,232EPDNEW
RGD ID:6788406
Promoter ID:HG_KWN:11565
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid
Transcripts:OTTHUMT00000050898
Position:
Human AssemblyChrPosition (strand)Source
Build 3610126,621,114 - 126,621,614 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:18224 AgrOrtholog
COSMIC ZRANB1 COSMIC
Ensembl Genes ENSG00000019995 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000359653 ENTREZGENE
  ENST00000359653.4 UniProtKB/Swiss-Prot
Gene3D-CATH 1.25.40.560 UniProtKB/Swiss-Prot
  Zinc finger, RanBP2-type UniProtKB/Swiss-Prot
GTEx ENSG00000019995 GTEx
HGNC ID HGNC:18224 ENTREZGENE
Human Proteome Map ZRANB1 Human Proteome Map
InterPro AnkUBD UniProtKB/Swiss-Prot
  OTU_Deubiquitinase UniProtKB/Swiss-Prot
  OTU_dom UniProtKB/Swiss-Prot
  Znf_RanBP2 UniProtKB/Swiss-Prot
  Znf_RanBP2_sf UniProtKB/Swiss-Prot
  ZRANB1_OTU UniProtKB/Swiss-Prot
KEGG Report hsa:54764 UniProtKB/Swiss-Prot
NCBI Gene 54764 ENTREZGENE
OMIM 611749 OMIM
PANTHER UBIQUITIN THIOESTERASE UniProtKB/Swiss-Prot
  UBIQUITIN THIOESTERASE ZRANB1 UniProtKB/Swiss-Prot
Pfam AnkUBD UniProtKB/Swiss-Prot
  OTU UniProtKB/Swiss-Prot
  zf-RanBP UniProtKB/Swiss-Prot
PharmGKB PA134933584 PharmGKB
PROSITE OTU UniProtKB/Swiss-Prot
  ZF_RANBP2_1 UniProtKB/Swiss-Prot
  ZF_RANBP2_2 UniProtKB/Swiss-Prot
SMART ZnF_RBZ UniProtKB/Swiss-Prot
Superfamily-SCOP SSF90209 UniProtKB/Swiss-Prot
UniProt B4DZ98 ENTREZGENE
  D3DRF4 ENTREZGENE
  Q5SQP6 ENTREZGENE
  Q69YK3 ENTREZGENE
  Q9UGI0 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary B4DZ98 UniProtKB/Swiss-Prot
  D3DRF4 UniProtKB/Swiss-Prot
  Q5SQP6 UniProtKB/Swiss-Prot
  Q69YK3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-16 ZRANB1  zinc finger RANBP2-type containing 1    zinc finger, RAN-binding domain containing 1  Symbol and/or name change 5135510 APPROVED