Gart (phosphoribosylglycinamide formyltransferase) - Rat Genome Database

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Gene: Gart (phosphoribosylglycinamide formyltransferase) Mus musculus
Analyze
Symbol: Gart
Name: phosphoribosylglycinamide formyltransferase
RGD ID: 1318654
MGI Page MGI
Description: Enables phosphoribosylamine-glycine ligase activity. Involved in purine ribonucleoside monophosphate biosynthetic process. Is active in cytosol. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; respiratory system; and sensory organ. Orthologous to human GART (phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: G; Gaps; glycinamide ribonucleotide synthetase; glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide formyltransferase; P; Prgs; trifunctional purine biosynthetic protein adenosine-3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391691,418,283 - 91,444,505 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1691,418,074 - 91,443,840 (-)EnsemblGRCm39 Ensembl
GRCm381691,621,395 - 91,646,972 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1691,621,186 - 91,646,952 (-)EnsemblGRCm38mm10GRCm38
MGSCv371691,621,640 - 91,647,217 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361691,510,268 - 91,535,812 (-)NCBIMGSCv36mm8
Celera1692,698,203 - 92,723,705 (-)NCBICelera
Cytogenetic Map16C3.3NCBI
cM Map1653.18NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-chloro-2,4-dinitrobenzene  (ISO)
17alpha-ethynylestradiol  (EXP)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,4-dinitrotoluene  (ISO)
2,6-dimethoxyphenol  (ISO)
2,6-dinitrotoluene  (ISO)
2-bromohexadecanoic acid  (ISO)
2-methylcholine  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-amino-2,6-dinitrotoluene  (ISO)
5-fluorouracil  (ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzatropine  (ISO)
benzo[a]pyrene  (EXP)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chlorophyllin  (ISO)
chromium(6+)  (EXP)
clofibric acid  (ISO)
clozapine  (ISO)
cobalt dichloride  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
DDE  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP)
diclofenac  (ISO)
enzyme inhibitor  (ISO)
ethanol  (EXP)
ethyl methanesulfonate  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
fulvestrant  (ISO)
furfural  (ISO)
gallic acid  (ISO)
hydrogen peroxide  (ISO)
indometacin  (ISO)
ivermectin  (ISO)
menadione  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
methylparaben  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
nickel atom  (ISO)
nitrates  (EXP)
oxaliplatin  (ISO)
ozone  (ISO)
paracetamol  (ISO)
paraquat  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (ISO)
pyrogallol  (EXP)
resveratrol  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
sodium dichromate  (ISO)
sodium fluoride  (EXP)
tamoxifen  (EXP)
testosterone  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
thiram  (ISO)
topotecan  (ISO)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
triphenyl phosphate  (ISO)
triptonide  (EXP)
valproic acid  (ISO)
vincristine  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (IBA,IDA,ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. The human GARS-AIRS-GART gene encodes two proteins which are differentially expressed during human brain development and temporally overexpressed in cerebellum of individuals with Down syndrome. Brodsky G, etal., Hum Mol Genet. 1997 Nov;6(12):2043-50.
2. A gene expression map of human chromosome 21 orthologues in the mouse. Gitton Y, etal., Nature 2002 Dec 5;420(6915):586-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
7. Human chromosome 21 gene expression atlas in the mouse. Reymond A, etal., Nature 2002 Dec 5;420(6915):582-6.
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Trafficking of intracellular folates. Stover PJ and Field MS, Adv Nutr. 2011 Jul;2(4):325-31. doi: 10.3945/¿an.111.000596. Epub 2011 Jun 28.
11. Crystal structures of human GAR Tfase at low and high pH and with substrate beta-GAR. Zhang Y, etal., Biochemistry 2002 Dec 3;41(48):14206-15.
Additional References at PubMed
PMID:1730621   PMID:1783381   PMID:2183217   PMID:3160288   PMID:7829519   PMID:8299947   PMID:8318737   PMID:8328969   PMID:8406490   PMID:9244437   PMID:9265631   PMID:10349636  
PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:14681479   PMID:15489334   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:17015433   PMID:17967808   PMID:18799693   PMID:19521566   PMID:21442329   PMID:21677750   PMID:21873635   PMID:24457600   PMID:26370502   PMID:27626380   PMID:28378742  
PMID:30457570   PMID:30550785   PMID:38355793  


Genomics

Comparative Map Data
Gart
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391691,418,283 - 91,444,505 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1691,418,074 - 91,443,840 (-)EnsemblGRCm39 Ensembl
GRCm381691,621,395 - 91,646,972 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1691,621,186 - 91,646,952 (-)EnsemblGRCm38mm10GRCm38
MGSCv371691,621,640 - 91,647,217 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361691,510,268 - 91,535,812 (-)NCBIMGSCv36mm8
Celera1692,698,203 - 92,723,705 (-)NCBICelera
Cytogenetic Map16C3.3NCBI
cM Map1653.18NCBI
GART
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382133,503,931 - 33,542,893 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2133,503,931 - 33,543,491 (-)EnsemblGRCh38hg38GRCh38
GRCh372134,876,238 - 34,915,198 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362133,798,139 - 33,836,286 (-)NCBINCBI36Build 36hg18NCBI36
Build 342133,818,186 - 33,836,286NCBI
Celera2120,075,872 - 20,114,832 (-)NCBICelera
Cytogenetic Map21q22.11ENTREZGENE
HuRef2120,354,547 - 20,393,666 (-)NCBIHuRef
CHM1_12134,438,919 - 34,477,881 (-)NCBICHM1_1
T2T-CHM13v2.02131,885,765 - 31,924,746 (-)NCBIT2T-CHM13v2.0
Gart
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81144,351,841 - 44,377,086 (-)NCBIGRCr8
mRatBN7.21130,864,896 - 30,891,125 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1130,865,889 - 30,891,125 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1139,559,784 - 39,585,049 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01132,231,220 - 32,256,482 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01131,396,470 - 31,421,682 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01131,780,477 - 31,805,728 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1131,780,487 - 31,805,728 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01135,389,216 - 35,414,461 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41131,594,859 - 31,620,110 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11131,646,660 - 31,659,129 (-)NCBI
Celera1130,533,312 - 30,558,557 (-)NCBICelera
Cytogenetic Map11q11NCBI
Gart
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540732,944,164 - 32,973,863 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540732,944,638 - 32,975,142 (-)NCBIChiLan1.0ChiLan1.0
GART
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22229,622,168 - 29,660,376 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12124,479,281 - 24,520,421 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02119,871,656 - 19,909,893 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12133,244,457 - 33,282,709 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2133,244,457 - 33,282,331 (-)Ensemblpanpan1.1panPan2
LOC487740
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13129,032,399 - 29,063,706 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Gart
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497128,685,224 - 28,715,394 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365008,753,463 - 8,786,236 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365008,750,928 - 8,782,303 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GART
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13197,130,904 - 197,161,891 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113197,130,898 - 197,158,797 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213206,941,099 - 206,971,945 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GART
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1258,641,566 - 58,682,014 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl258,643,877 - 58,683,023 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660711,144,831 - 1,183,711 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gart
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474521,734,282 - 21,762,734 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474521,735,431 - 21,763,330 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gart
868 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:1197
Count of miRNA genes:611
Interacting mature miRNAs:750
Transcripts:ENSMUST00000023684, ENSMUST00000120450, ENSMUST00000156713
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302194Pgia10_mproteoglycan induced arthritis 10 (mouse)Not determined166860072298008968Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163544664392573008Mouse
1300928Etia_methanol induced activation (mouse)Not determined166331390797314016Mouse
1558740Bpq9_mblood pressure QTL 9 (mouse)Not determined166332733697327472Mouse
1301125Sluc27_msusceptibility to lung cancer 27 (mouse)Not determined166160864495608764Mouse
4141113Tgq28_mtriglyceride QTL 28 (mouse)Not determined6298664696986646Mouse
4142262Lmr18_mleishmaniasis resistance 18 (mouse)Not determined166912761198008968Mouse
1301032Tauph_mtau phosphorylation (mouse)Not determined166907613298008968Mouse
11049573Lmr18b_mleishmaniasis resistance 18b (mouse)166912761198008968Mouse
1301598Renf2_mrenal failure 2 (mouse)Not determined167038025298008968Mouse
11049574Lmr18a_mleishmaniasis resistance 18a (mouse)166912761198008968Mouse
11522753Cocia19_mcocaine-induced activity, QTL 19 (mouse)166925448298008968Mouse

Markers in Region
U20892  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381691,621,430 - 91,621,532UniSTSGRCm38
MGSCv371691,621,675 - 91,621,777UniSTSGRCm37
Celera1692,698,238 - 92,698,340UniSTS
Cytogenetic Map16C3-C4UniSTS
Whitehead/MRC_RH16980.93UniSTS
UniSTS:224553  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381691,633,576 - 91,633,772UniSTSGRCm38
MGSCv371691,633,821 - 91,634,017UniSTSGRCm37
Celera1692,710,359 - 92,710,555UniSTS
Cytogenetic Map16C3-C4UniSTS
Gart  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map16C3-C4UniSTS
cM Map1663.0UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001357351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001425094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001425095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036159781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC131691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH006779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB843046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV650270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U01023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U01024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000023684   ⟹   ENSMUSP00000023684
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1691,418,074 - 91,443,840 (-)Ensembl
GRCm38.p6 Ensembl1691,621,186 - 91,646,952 (-)Ensembl
Ensembl Acc Id: ENSMUST00000120450   ⟹   ENSMUSP00000114034
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1691,430,293 - 91,443,823 (-)Ensembl
GRCm38.p6 Ensembl1691,633,405 - 91,646,935 (-)Ensembl
Ensembl Acc Id: ENSMUST00000156713   ⟹   ENSMUSP00000119272
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1691,418,281 - 91,440,034 (-)Ensembl
GRCm38.p6 Ensembl1691,621,393 - 91,643,146 (-)Ensembl
Ensembl Acc Id: ENSMUST00000231380   ⟹   ENSMUSP00000156232
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1691,430,293 - 91,443,813 (-)Ensembl
GRCm38.p6 Ensembl1691,633,405 - 91,646,925 (-)Ensembl
Ensembl Acc Id: ENSMUST00000231444   ⟹   ENSMUSP00000155865
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1691,438,529 - 91,443,817 (-)Ensembl
GRCm38.p6 Ensembl1691,641,641 - 91,646,929 (-)Ensembl
Ensembl Acc Id: ENSMUST00000231702
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1691,432,881 - 91,435,315 (-)Ensembl
GRCm38.p6 Ensembl1691,635,993 - 91,638,427 (-)Ensembl
Ensembl Acc Id: ENSMUST00000231775
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1691,439,618 - 91,443,800 (-)Ensembl
GRCm38.p6 Ensembl1691,642,730 - 91,646,912 (-)Ensembl
Ensembl Acc Id: ENSMUST00000231863
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1691,438,043 - 91,439,971 (-)Ensembl
GRCm38.p6 Ensembl1691,641,155 - 91,643,083 (-)Ensembl
Ensembl Acc Id: ENSMUST00000232289   ⟹   ENSMUSP00000156002
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1691,418,292 - 91,443,819 (-)Ensembl
GRCm38.p6 Ensembl1691,621,404 - 91,646,931 (-)Ensembl
Ensembl Acc Id: ENSMUST00000232367   ⟹   ENSMUSP00000156142
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1691,435,615 - 91,443,809 (-)Ensembl
GRCm38.p6 Ensembl1691,638,727 - 91,646,921 (-)Ensembl
Ensembl Acc Id: ENSMUST00000232620
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1691,418,561 - 91,419,161 (-)Ensembl
GRCm38.p6 Ensembl1691,621,673 - 91,622,273 (-)Ensembl
Ensembl Acc Id: ENSMUST00000232640   ⟹   ENSMUSP00000155957
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1691,418,292 - 91,418,815 (-)Ensembl
GRCm38.p6 Ensembl1691,621,404 - 91,621,927 (-)Ensembl
Ensembl Acc Id: ENSMUST00000232643   ⟹   ENSMUSP00000156130
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1691,418,292 - 91,419,905 (-)Ensembl
GRCm38.p6 Ensembl1691,621,404 - 91,623,017 (-)Ensembl
RefSeq Acc Id: NM_001357351   ⟹   NP_001344280
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391691,418,283 - 91,443,841 (-)NCBI
GRCm381691,621,395 - 91,646,972 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001425094   ⟹   NP_001412023
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391691,418,283 - 91,443,841 (-)NCBI
RefSeq Acc Id: NM_001425095   ⟹   NP_001412024
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391691,418,283 - 91,443,841 (-)NCBI
RefSeq Acc Id: NM_010256   ⟹   NP_034386
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391691,418,283 - 91,443,841 (-)NCBI
GRCm381691,621,395 - 91,646,972 (-)NCBI
MGSCv371691,621,640 - 91,647,217 (-)RGD
Celera1692,698,203 - 92,723,705 (-)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036159781   ⟹   XP_036015674
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391691,423,731 - 91,444,505 (-)NCBI
Sequence:
RefSeq Acc Id: NP_034386   ⟸   NM_010256
- UniProtKB: Q3TGI3 (UniProtKB/Swiss-Prot),   Q6NS48 (UniProtKB/Swiss-Prot),   Q64737 (UniProtKB/Swiss-Prot),   Q3UJP8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001344280   ⟸   NM_001357351
- UniProtKB: Q64737 (UniProtKB/Swiss-Prot),   Q3TGI3 (UniProtKB/Swiss-Prot),   Q6NS48 (UniProtKB/Swiss-Prot),   Q3UJP8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000156232   ⟸   ENSMUST00000231380
Ensembl Acc Id: ENSMUSP00000155865   ⟸   ENSMUST00000231444
Ensembl Acc Id: ENSMUSP00000114034   ⟸   ENSMUST00000120450
Ensembl Acc Id: ENSMUSP00000156002   ⟸   ENSMUST00000232289
Ensembl Acc Id: ENSMUSP00000156142   ⟸   ENSMUST00000232367
Ensembl Acc Id: ENSMUSP00000155957   ⟸   ENSMUST00000232640
Ensembl Acc Id: ENSMUSP00000156130   ⟸   ENSMUST00000232643
Ensembl Acc Id: ENSMUSP00000119272   ⟸   ENSMUST00000156713
Ensembl Acc Id: ENSMUSP00000023684   ⟸   ENSMUST00000023684
RefSeq Acc Id: XP_036015674   ⟸   XM_036159781
- Peptide Label: isoform X2
RefSeq Acc Id: NP_001412024   ⟸   NM_001425095
- UniProtKB: Q6NS48 (UniProtKB/Swiss-Prot),   Q64737 (UniProtKB/Swiss-Prot),   Q3TGI3 (UniProtKB/Swiss-Prot),   Q3UJP8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001412023   ⟸   NM_001425094
- UniProtKB: Q6NS48 (UniProtKB/Swiss-Prot),   Q64737 (UniProtKB/Swiss-Prot),   Q3TGI3 (UniProtKB/Swiss-Prot),   Q3UJP8 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q64737-F1-model_v2 AlphaFold Q64737 1-1010 view protein structure

Promoters
RGD ID:13674444
Promoter ID:EPDNEW_M21371
Type:initiation region
Name:Gart_1
Description:Mus musculus phosphoribosylglycinamide formyltransferase , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381691,646,953 - 91,647,013EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:95654 AgrOrtholog
Ensembl Genes ENSMUSG00000022962 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000023684 ENTREZGENE
  ENSMUST00000023684.14 UniProtKB/Swiss-Prot
  ENSMUST00000120450.2 UniProtKB/Swiss-Prot
  ENSMUST00000231380.2 UniProtKB/Swiss-Prot
  ENSMUST00000232289 ENTREZGENE
  ENSMUST00000232289.2 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.1330.10 UniProtKB/Swiss-Prot
  3.30.1490.20 UniProtKB/Swiss-Prot
  3.40.50.20 UniProtKB/Swiss-Prot
  3.90.600.10 UniProtKB/Swiss-Prot
  3.90.650.10 UniProtKB/Swiss-Prot
  ATP-grasp fold, B domain UniProtKB/Swiss-Prot
  Formyl transferase, N-terminal domain UniProtKB/Swiss-Prot
InterPro ATP-grasp UniProtKB/Swiss-Prot
  ATP_grasp_subdomain_1 UniProtKB/Swiss-Prot
  Formyl_transf_N UniProtKB/Swiss-Prot
  Formyl_transf_N_sf UniProtKB/Swiss-Prot
  GART UniProtKB/Swiss-Prot
  GART_AS UniProtKB/Swiss-Prot
  PreATP-grasp_dom_sf UniProtKB/Swiss-Prot
  PRibGlycinamid_synth_ATP-grasp UniProtKB/Swiss-Prot
  PRibGlycinamide_synth UniProtKB/Swiss-Prot
  PRibGlycinamide_synth_C-dom UniProtKB/Swiss-Prot
  PRibGlycinamide_synth_C_sf UniProtKB/Swiss-Prot
  PRibGlycinamide_synth_CS UniProtKB/Swiss-Prot
  PRibGlycinamide_synth_N UniProtKB/Swiss-Prot
  PurM-like_C_dom UniProtKB/Swiss-Prot
  PurM-like_C_sf UniProtKB/Swiss-Prot
  PurM-like_N UniProtKB/Swiss-Prot
  PurM-like_N_sf UniProtKB/Swiss-Prot
  PurM_cligase UniProtKB/Swiss-Prot
  Rudment_hybrid_motif UniProtKB/Swiss-Prot
KEGG Report mmu:14450 UniProtKB/Swiss-Prot
MGD MGI:95654 ENTREZGENE
NCBI Gene 14450 ENTREZGENE
PANTHER PTHR10520 UniProtKB/Swiss-Prot
  TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3 UniProtKB/Swiss-Prot
Pfam AIRS UniProtKB/Swiss-Prot
  AIRS_C UniProtKB/Swiss-Prot
  Formyl_trans_N UniProtKB/Swiss-Prot
  GARS_A UniProtKB/Swiss-Prot
  GARS_C UniProtKB/Swiss-Prot
  GARS_N UniProtKB/Swiss-Prot
PharmGKB GART RGD
PhenoGen Gart PhenoGen
PROSITE ATP_GRASP UniProtKB/Swiss-Prot
  GARS UniProtKB/Swiss-Prot
  GART UniProtKB/Swiss-Prot
SMART GARS_A UniProtKB/Swiss-Prot
  GARS_C UniProtKB/Swiss-Prot
Superfamily-SCOP Glutathione synthetase ATP-binding domain-like UniProtKB/Swiss-Prot
  SSF51246 UniProtKB/Swiss-Prot
  SSF52440 UniProtKB/Swiss-Prot
  SSF53328 UniProtKB/Swiss-Prot
  SSF55326 UniProtKB/Swiss-Prot
  SSF56042 UniProtKB/Swiss-Prot
UniProt A0A338P676_MOUSE UniProtKB/TrEMBL
  A0A338P6T2_MOUSE UniProtKB/TrEMBL
  A0A338P6W0_MOUSE UniProtKB/TrEMBL
  A0A338P6X4_MOUSE UniProtKB/TrEMBL
  D6RCG1_MOUSE UniProtKB/TrEMBL
  PUR2_MOUSE UniProtKB/Swiss-Prot
  Q3TGI3 ENTREZGENE
  Q3TH49_MOUSE UniProtKB/TrEMBL
  Q3UJP8 ENTREZGENE, UniProtKB/TrEMBL
  Q64737 ENTREZGENE
  Q6NS48 ENTREZGENE
UniProt Secondary Q3TGI3 UniProtKB/Swiss-Prot
  Q6NS48 UniProtKB/Swiss-Prot