Ndor1 (NADPH dependent diflavin oxidoreductase 1) - Rat Genome Database

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Gene: Ndor1 (NADPH dependent diflavin oxidoreductase 1) Mus musculus
Analyze
Symbol: Ndor1
Name: NADPH dependent diflavin oxidoreductase 1
RGD ID: 1318272
MGI Page MGI
Description: Predicted to enable several functions, including NADPH-hemoprotein reductase activity; nucleotide binding activity; and oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor. Predicted to be involved in electron transport chain. Predicted to be located in cytoplasm; intermediate filament cytoskeleton; and nucleoplasm. Predicted to be active in cytosol. Orthologous to human NDOR1 (NADPH dependent diflavin oxidoreductase 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4930447P04Rik; N; NADPH-dependent diflavin oxidoreductase 1; NADPH-dependent FMN and FAD-containing oxidoreductase; Ndor; NR1; Tg(UBC-cre)1Ejb; Tg(UBC-cre/ERT2)1Ejb; Tg(UBC-cre/ESR1)1Ejb; Ubc-cre
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39225,134,825 - 25,145,458 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl225,134,875 - 25,145,398 (-)EnsemblGRCm39 Ensembl
GRCm39 Ensembl225,134,833 - 25,146,034 (-)EnsemblGRCm39 Ensembl
GRCm39 Ensembl225,134,831 - 25,136,875 (-)EnsemblGRCm39 Ensembl
GRCm38225,244,813 - 25,255,509 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl225,244,819 - 25,246,863 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl225,244,821 - 25,256,022 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl225,244,863 - 25,255,386 (-)EnsemblGRCm38mm10GRCm38
MGSCv37225,100,339 - 25,110,934 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36225,066,828 - 25,077,387 (-)NCBIMGSCv36mm8
Celera224,972,746 - 24,983,340 (-)NCBICelera
Cytogenetic Map2A3NCBI
cM Map217.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal adipose tissue development  (IAGP)
abnormal bone marrow cell morphology/development  (IAGP)
abnormal bone marrow cell physiology  (IAGP)
abnormal bone marrow morphology  (IAGP)
abnormal bone mineralization  (IAGP)
abnormal brain vasculature morphology  (IAGP)
abnormal bronchiole epithelium morphology  (IAGP)
abnormal calcium ion homeostasis  (IAGP)
abnormal cell nucleus morphology  (IAGP)
abnormal cellular respiration  (IAGP)
abnormal circadian sleep/wake cycle  (IAGP)
abnormal coat/hair pigmentation  (IAGP)
abnormal digestive system morphology  (IAGP)
abnormal double-strand DNA break repair  (IAGP)
abnormal enterocyte proliferation  (IAGP)
abnormal enthesis morphology  (IAGP)
abnormal erythropoiesis  (IAGP)
abnormal esophageal squamous epithelium morphology  (IAGP)
abnormal extraembryonic tissue morphology  (IAGP)
abnormal femur morphology  (IAGP)
abnormal hair cycle  (IAGP)
abnormal hair follicle bulge morphology  (IAGP)
abnormal hair follicle development  (IAGP)
abnormal hair follicle morphology  (IAGP)
abnormal hair growth  (IAGP)
abnormal hair shaft morphology  (IAGP)
abnormal hematopoietic stem cell physiology  (IAGP)
abnormal hematopoietic system physiology  (IAGP)
abnormal hepatocyte morphology  (IAGP)
abnormal intestinal epithelium morphology  (IAGP)
abnormal intestinal mucosa morphology  (IAGP)
abnormal intestine apoptosis  (IAGP)
abnormal intestine morphology  (IAGP)
abnormal intestine regeneration  (IAGP)
abnormal kidney morphology  (IAGP)
abnormal large intestine crypts of Lieberkuhn morphology  (IAGP)
abnormal liver morphology  (IAGP)
abnormal long bone diaphysis morphology  (IAGP)
abnormal long bone metaphysis morphology  (IAGP)
abnormal male meiosis  (IAGP)
abnormal mitochondrial crista morphology  (IAGP)
abnormal mitochondrial morphology  (IAGP)
abnormal mitochondrial physiology  (IAGP)
abnormal mitophagy  (IAGP)
abnormal mitosis  (IAGP)
abnormal myocardial fiber mitochondrial morphology  (IAGP)
abnormal myocardial fiber morphology  (IAGP)
abnormal nest building behavior  (IAGP)
abnormal neuromuscular synapse morphology  (IAGP)
abnormal neuronal stem cell physiology  (IAGP)
abnormal NK T cell physiology  (IAGP)
abnormal non-rapid eye movement sleep pattern  (IAGP)
abnormal osteoblast cell number  (IAGP)
abnormal osteocyte dendritic process morphology  (IAGP)
abnormal osteocyte lacuna morphology  (IAGP)
abnormal osteocyte morphology  (IAGP)
abnormal osteoid morphology  (IAGP)
abnormal pelvic girdle bone morphology  (IAGP)
abnormal placenta morphology  (IAGP)
abnormal placental labyrinth vasculature morphology  (IAGP)
abnormal proerythroblast morphology  (IAGP)
abnormal pulmonary alveolar parenchyma morphology  (IAGP)
abnormal pulmonary alveolus morphology  (IAGP)
abnormal response to new environment  (IAGP)
abnormal sarcomere morphology  (IAGP)
abnormal skeletal muscle fiber mitochondrial morphology  (IAGP)
abnormal skeletal muscle morphology  (IAGP)
abnormal skin morphology  (IAGP)
abnormal skin pigmentation  (IAGP)
abnormal small intestinal crypt cell proliferation  (IAGP)
abnormal small intestine crypts of Lieberkuhn morphology  (IAGP)
abnormal sperm physiology  (IAGP)
abnormal spermatocyte morphology  (IAGP)
abnormal spermatogenesis  (IAGP)
abnormal stomach glandular epithelium morphology  (IAGP)
abnormal susceptibility to injury induced morbidity/mortality  (IAGP)
abnormal tendon collagen fibril morphology  (IAGP)
abnormal thymus involution  (IAGP)
abnormal thymus physiology  (IAGP)
abnormal tibia morphology  (IAGP)
abnormal trabecular bone morphology  (IAGP)
abnormal trochanter morphology  (IAGP)
abnormal tumor morphology  (IAGP)
abnormal vitelline artery morphology  (IAGP)
abnormal vitelline vasculature morphology  (IAGP)
abnormal wound healing  (IAGP)
abnormal Z line morphology  (IAGP)
alopecia  (IAGP)
anemia  (IAGP)
asthenozoospermia  (IAGP)
ataxia  (IAGP)
azoospermia  (IAGP)
behavioral despair  (IAGP)
blood vessel congestion  (IAGP)
brain vacuoles  (IAGP)
cardiac fibrosis  (IAGP)
cellular necrosis  (IAGP)
decreased airway responsiveness  (IAGP)
decreased B cell number  (IAGP)
decreased body length  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased bone marrow cell number  (IAGP)
decreased bone mineral content  (IAGP)
decreased bone mineral density of femur  (IAGP)
decreased bone strength  (IAGP)
decreased bone trabecula number  (IAGP)
decreased carbon dioxide production  (IAGP)
decreased cardiac muscle contractility  (IAGP)
decreased cell proliferation  (IAGP)
decreased circulating alanine transaminase level  (IAGP)
decreased circulating glucose level  (IAGP)
decreased circulating interleukin-17 level  (IAGP)
decreased circulating interleukin-4 level  (IAGP)
decreased circulating testosterone level  (IAGP)
decreased collagen level  (IAGP)
decreased compact bone thickness  (IAGP)
decreased compact bone volume  (IAGP)
decreased embryo size  (IAGP)
decreased energy dissipated prior to femur fracture  (IAGP)
decreased erythroblast number  (IAGP)
decreased erythrocyte cell number  (IAGP)
decreased femur compact bone thickness  (IAGP)
decreased femur maximal load  (IAGP)
decreased femur stiffness  (IAGP)
decreased femur yield load  (IAGP)
decreased fibroblast proliferation  (IAGP)
decreased food intake  (IAGP)
decreased gonadal fat pad weight  (IAGP)
decreased grooming behavior  (IAGP)
decreased hair follicle number  (IAGP)
decreased hematocrit  (IAGP)
decreased hematopoietic cell number  (IAGP)
decreased hematopoietic stem cell number  (IAGP)
decreased hemoglobin content  (IAGP)
decreased incidence of tumors by chemical induction  (IAGP)
decreased inguinal fat pad weight  (IAGP)
decreased interferon-gamma secretion  (IAGP)
decreased lean body mass  (IAGP)
decreased leukocyte cell number  (IAGP)
decreased locomotor activity  (IAGP)
decreased lymphocyte cell number  (IAGP)
decreased male germ cell number  (IAGP)
decreased mitochondrial number  (IAGP)
decreased monocyte cell number  (IAGP)
decreased NK cell number  (IAGP)
decreased oxygen consumption  (IAGP)
decreased placental labyrinth size  (IAGP)
decreased respiratory mucosa goblet cell number  (IAGP)
decreased respiratory quotient  (IAGP)
decreased small intestinal villus height  (IAGP)
decreased small intestinal villus size  (IAGP)
decreased subcutaneous adipose tissue amount  (IAGP)
decreased susceptibility to diet-induced hepatic steatosis  (IAGP)
decreased susceptibility to diet-induced obesity  (IAGP)
decreased susceptibility to injury  (IAGP)
decreased susceptibility to type I hypersensitivity reaction  (IAGP)
decreased telomere length  (IAGP)
decreased testis weight  (IAGP)
decreased thymocyte number  (IAGP)
decreased thymus weight  (IAGP)
decreased total body fat amount  (IAGP)
decreased trabecular bone mass  (IAGP)
delayed hair regrowth  (IAGP)
dilated cardiomyopathy  (IAGP)
disheveled coat  (IAGP)
disorganized long bone epiphyseal plate  (IAGP)
disorganized yolk sac vascular plexus  (IAGP)
elevated level of mitotic sister chromatid exchange  (IAGP)
embryonic growth retardation  (IAGP)
embryonic lethality during organogenesis  (IAGP)
enlarged heart  (IAGP)
enlarged liver  (IAGP)
enlarged lymph nodes  (IAGP)
enlarged popliteal lymph nodes  (IAGP)
enlarged spleen  (IAGP)
epidermal atrophy  (IAGP)
esophageal inflammation  (IAGP)
femur fracture  (IAGP)
fragile skeleton  (IAGP)
hematopoietic system phenotype  (IAGP)
hunched posture  (IAGP)
hypoactivity  (IAGP)
impaired coordination  (IAGP)
impaired righting response  (IAGP)
improved glucose tolerance  (IAGP)
increased apoptosis  (IAGP)
increased bone ossification  (IAGP)
increased bone resorption  (IAGP)
increased bone trabecular spacing  (IAGP)
increased cardiac muscle glycogen level  (IAGP)
increased cardiomyocyte apoptosis  (IAGP)
increased circulating alanine transaminase level  (IAGP)
increased circulating aspartate transaminase level  (IAGP)
increased circulating cholesterol level  (IAGP)
increased circulating corticosterone level  (IAGP)
increased circulating follicle stimulating hormone level  (IAGP)
increased circulating insulin level  (IAGP)
increased circulating luteinizing hormone level  (IAGP)
increased fibroblast apoptosis  (IAGP)
increased food intake  (IAGP)
increased hepatocyte karyomegaly  (IAGP)
increased hepatocyte proliferation  (IAGP)
increased incidence of tumors by chemical induction  (IAGP)
increased incidence of tumors by ionizing radiation induction  (IAGP)
increased insulin sensitivity  (IAGP)
increased interferon-gamma secretion  (IAGP)
increased liver iron level  (IAGP)
increased long bone epiphyseal plate size  (IAGP)
increased lymphoma incidence  (IAGP)
increased macrophage cell number  (IAGP)
increased male germ cell apoptosis  (IAGP)
increased monocyte cell number  (IAGP)
increased mortality induced by gamma-irradiation  (IAGP)
increased neutrophil cell number  (IAGP)
increased osteoclast cell number  (IAGP)
increased skeletal muscle glycogen level  (IAGP)
increased small intestinal crypt cell apoptosis  (IAGP)
increased susceptibility to induced colitis  (IAGP)
increased susceptibility to Orthomyxoviridae infection  (IAGP)
increased susceptibility to Orthomyxoviridae infection induced morbidity/mortality  (IAGP)
increased total body fat amount  (IAGP)
increased trabecular bone mass  (IAGP)
increased width of hypertrophic chondrocyte zone  (IAGP)
kidney atrophy  (IAGP)
kidney inflammation  (IAGP)
kyphosis  (IAGP)
lethargy  (IAGP)
limb grasping  (IAGP)
liver hypoplasia  (IAGP)
liver inflammation  (IAGP)
lung inflammation  (IAGP)
macrocytosis  (IAGP)
male infertility  (IAGP)
matted coat  (IAGP)
mitotic nondisjunction  (IAGP)
moribund  (IAGP)
myeloid hyperplasia  (IAGP)
neoplasm  (IAGP)
nephrocalcinosis  (IAGP)
neurodegeneration  (IAGP)
no abnormal phenotype detected  (IAGP)
oligozoospermia  (IAGP)
osteomalacia  (IAGP)
osteoporosis  (IAGP)
postnatal growth retardation  (IAGP)
premature acrosome reaction  (IAGP)
premature aging  (IAGP)
premature death  (IAGP)
renal fibrosis  (IAGP)
renal glomerulus atrophy  (IAGP)
renal tubule atrophy  (IAGP)
respiratory distress  (IAGP)
retarded hair growth  (IAGP)
reticulocytopenia  (IAGP)
rib fractures  (IAGP)
sebaceous gland atrophy  (IAGP)
sebaceous gland hyperplasia  (IAGP)
seizures  (IAGP)
short femur  (IAGP)
skeletal muscle endomysial fibrosis  (IAGP)
skeletal muscle fiber degeneration  (IAGP)
skeletal muscle fiber necrosis  (IAGP)
slow postnatal weight gain  (IAGP)
small intestinal inflammation  (IAGP)
small seminiferous tubules  (IAGP)
small spleen  (IAGP)
small testis  (IAGP)
small thymus  (IAGP)
testis degeneration  (IAGP)
thick skin  (IAGP)
thin dermal layer  (IAGP)
thrombocytopenia  (IAGP)
thymus atrophy  (IAGP)
thymus cortex atrophy  (IAGP)
thymus medulla atrophy  (IAGP)
tremors  (IAGP)
tumor regression  (IAGP)
weight loss  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Iron-sulfur cluster biogenesis in mammalian cells: New insights into the molecular mechanisms of cluster delivery. Maio N and Rouault TA, Biochim Biophys Acta. 2015 Jun;1853(6):1493-512. doi: 10.1016/j.bbamcr.2014.09.009. Epub 2014 Sep 19.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. Biogenesis of cytosolic and nuclear iron-sulfur proteins and their role in genome stability. Paul VD and Lill R, Biochim Biophys Acta. 2015 Jun;1853(6):1528-39. doi: 10.1016/j.bbamcr.2014.12.018. Epub 2015 Jan 10.
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16415155   PMID:17284606   PMID:17437992   PMID:18064675   PMID:18371340  
PMID:19228930   PMID:19718024   PMID:19782648   PMID:20029045   PMID:20181618   PMID:20194717   PMID:20231889   PMID:20534480   PMID:20805417   PMID:20847203   PMID:20884806   PMID:20951351  
PMID:20960542   PMID:21068439   PMID:21098704   PMID:21124450   PMID:21233312   PMID:21469089   PMID:21538807   PMID:21576378   PMID:21592121   PMID:21677750   PMID:21709239   PMID:21745337  
PMID:21811636   PMID:21873635   PMID:21937697   PMID:22083997   PMID:22133876   PMID:22262770   PMID:22281595   PMID:22344272   PMID:22461615   PMID:22490864   PMID:22496155   PMID:22505032  
PMID:22560220   PMID:22590468   PMID:22683124   PMID:22719018   PMID:22878400   PMID:22956580   PMID:22956684   PMID:22958934   PMID:23071091   PMID:23090952   PMID:23103253   PMID:23105101  
PMID:23114598   PMID:23135404   PMID:23166357   PMID:23274892   PMID:23300482   PMID:23303943   PMID:23341605   PMID:23349489   PMID:23359070   PMID:23426945   PMID:23430111   PMID:23434755  
PMID:23550211   PMID:23630229   PMID:23650393   PMID:23666760   PMID:23747947   PMID:23762465   PMID:23824539   PMID:23826075   PMID:23892607   PMID:23911236   PMID:23920045   PMID:23940255  
PMID:24045941   PMID:24120466   PMID:24277151   PMID:24280772   PMID:24284823   PMID:24360282   PMID:24419319   PMID:24589777   PMID:24627144   PMID:24704313   PMID:24764452   PMID:24768164  
PMID:24863064   PMID:24867641   PMID:24875857   PMID:24893291   PMID:24931715   PMID:24949970   PMID:24953181   PMID:25001283   PMID:25044936   PMID:25059582   PMID:25066055   PMID:25176653  
PMID:25198863   PMID:25202978   PMID:25208064   PMID:25232183   PMID:25238791   PMID:25320232   PMID:25352637   PMID:25421714   PMID:25526313   PMID:25550458   PMID:25601839   PMID:25683803  
PMID:25738463   PMID:25745057   PMID:25773539   PMID:25821220   PMID:25821987   PMID:25891430   PMID:25907831   PMID:25918248   PMID:25922078   PMID:25938788   PMID:25971796   PMID:26030024  
PMID:26070241   PMID:26153230   PMID:26157175   PMID:26184910   PMID:26242736   PMID:26338419   PMID:26344756   PMID:26371185   PMID:26407325   PMID:26436454   PMID:26443207   PMID:26455327  
PMID:26489471   PMID:26502404   PMID:26503986   PMID:26572061   PMID:26588779   PMID:26605526   PMID:26627607   PMID:26634935   PMID:26673135   PMID:26730405   PMID:26772200   PMID:26833095  
PMID:26842965   PMID:26868444   PMID:26894960   PMID:26903600   PMID:26929451   PMID:26944679   PMID:26968737   PMID:27030594   PMID:27048979   PMID:27098609   PMID:27131367   PMID:27150457  
PMID:27159393   PMID:27214556   PMID:27363389   PMID:27424807   PMID:27480114   PMID:27501247   PMID:27524497   PMID:27568978   PMID:27582095   PMID:27687577   PMID:27721421   PMID:27752542  
PMID:27841869   PMID:27847137   PMID:27861538   PMID:27872088   PMID:27889185   PMID:27903619   PMID:27927242   PMID:27993645   PMID:28005008   PMID:28049824   PMID:28068493   PMID:28132808  
PMID:28196594   PMID:28207886   PMID:28207927   PMID:28218624   PMID:28232602   PMID:28246215   PMID:28347764   PMID:28392070   PMID:28401936   PMID:28409408   PMID:28481222   PMID:28530642  
PMID:28538185   PMID:28538737   PMID:28641928   PMID:28655914   PMID:28708136   PMID:28715449   PMID:28734943   PMID:28752043   PMID:28763796   PMID:28801233   PMID:28803730   PMID:28816086  
PMID:28827363   PMID:28841417   PMID:28844693   PMID:28846109   PMID:28867346   PMID:28880281   PMID:28881863   PMID:28920924   PMID:28920953   PMID:29032953   PMID:29042623   PMID:29045572  
PMID:29045838   PMID:29056340   PMID:29078319   PMID:29131159   PMID:29136504   PMID:29136505   PMID:29153407   PMID:29176883   PMID:29206103   PMID:29235464   PMID:29272313   PMID:29275959  
PMID:29297928   PMID:29317452   PMID:29371232   PMID:29382756   PMID:29395869   PMID:29408933   PMID:29415061   PMID:29440505   PMID:29443964   PMID:29444819   PMID:29463562   PMID:29483358  
PMID:29526553   PMID:29529029   PMID:29562201   PMID:29563620   PMID:29567770   PMID:29570999   PMID:29581356   PMID:29654229   PMID:29669249   PMID:29724658   PMID:29741478   PMID:29774231  
PMID:29805078   PMID:29842893   PMID:29858012   PMID:29863470   PMID:29866844   PMID:29898247   PMID:29954852   PMID:29999500   PMID:30001398   PMID:30018091   PMID:30111655   PMID:30126904  
PMID:30184499   PMID:30185805   PMID:30186122   PMID:30193097   PMID:30201685   PMID:30218073   PMID:30226884   PMID:30254136   PMID:30275311   PMID:30295643   PMID:30297459   PMID:30302025  
PMID:30305391   PMID:30322915   PMID:30409784   PMID:30415890   PMID:30420518   PMID:30429607   PMID:30442942   PMID:30608919   PMID:30630985   PMID:30643265   PMID:30659012   PMID:30664665  
PMID:30670749   PMID:30694175   PMID:30703085   PMID:30774629   PMID:30788433   PMID:30814930   PMID:30815534   PMID:30956169   PMID:30958726   PMID:30975481   PMID:31028100   PMID:31037731  
PMID:31053503   PMID:31072410   PMID:31081125   PMID:31112699   PMID:31118412   PMID:31123254   PMID:31180336   PMID:31185000   PMID:31262999   PMID:31350178   PMID:31404087   PMID:31422913  
PMID:31434685   PMID:31435021   PMID:31442424   PMID:31474834   PMID:31500294   PMID:31619522   PMID:31676791   PMID:31754024   PMID:31809738   PMID:31848396   PMID:31866222   PMID:31880208  
PMID:31911947   PMID:31932454   PMID:31934864   PMID:31939453   PMID:31949165   PMID:31969449   PMID:31978365   PMID:31995032   PMID:31996678   PMID:32019591   PMID:32152063   PMID:32187554  
PMID:32193353   PMID:32229310   PMID:32241942   PMID:32242021   PMID:32245620   PMID:32253259   PMID:32268085   PMID:32271880   PMID:32320623   PMID:32325033   PMID:32348758   PMID:32398354  
PMID:32408014   PMID:32445858   PMID:32460032   PMID:32502964   PMID:32555289   PMID:32601467   PMID:32620751   PMID:32663458   PMID:32668281   PMID:32693086   PMID:32728066   PMID:32732898  
PMID:32783938   PMID:32826333   PMID:32900774   PMID:32932139   PMID:32966792   PMID:32971116   PMID:32994164   PMID:33027655   PMID:33027668   PMID:33144395   PMID:33175598   PMID:33184471  
PMID:33326784   PMID:33410752   PMID:33444292   PMID:33513349   PMID:33568812   PMID:33576044   PMID:33595435   PMID:33631277   PMID:33741967   PMID:33755662   PMID:33765133   PMID:33795715  
PMID:33807672   PMID:33838102   PMID:33852194   PMID:33859191   PMID:33886537   PMID:33893290   PMID:33907245   PMID:33927318   PMID:33938449   PMID:33951416   PMID:33966596   PMID:33984282  
PMID:34001900   PMID:34054870   PMID:34108862   PMID:34160349   PMID:34218273   PMID:34226276   PMID:34260944   PMID:34312668   PMID:34346780   PMID:34390859   PMID:34392304   PMID:34409938  
PMID:34433060   PMID:34463714   PMID:34566982   PMID:34586363   PMID:34767443   PMID:34793600   PMID:34818543   PMID:34875233   PMID:34921145   PMID:35015735   PMID:35031770   PMID:35080046  
PMID:35121987   PMID:35121988   PMID:35145078   PMID:35163456   PMID:35165165   PMID:35192688   PMID:35292640   PMID:35294890   PMID:35353625   PMID:35368022   PMID:35404932   PMID:35436993  
PMID:35439167   PMID:35444279   PMID:35470378   PMID:35508166   PMID:35523049   PMID:35537042   PMID:35670763   PMID:35672775   PMID:35675777   PMID:35705702   PMID:35737830   PMID:35864088  
PMID:35870449   PMID:35872107   PMID:35941116   PMID:35963866   PMID:35977484   PMID:36027907   PMID:36098804   PMID:36098964   PMID:36175420   PMID:36202972   PMID:36220098   PMID:36247475  
PMID:36322399   PMID:36323264   PMID:36326834   PMID:36353242   PMID:36433977   PMID:36443301   PMID:36526896   PMID:36550214   PMID:36594023   PMID:36638792   PMID:36646704   PMID:36822205  
PMID:36848371   PMID:36852644   PMID:36860703   PMID:36862513   PMID:36883955   PMID:36928090   PMID:37118341   PMID:37200093   PMID:37252171   PMID:37294664   PMID:37310920   PMID:37349316  
PMID:37421280   PMID:37516803   PMID:37536983   PMID:37709995   PMID:37739454   PMID:37812819   PMID:37833277   PMID:37865088   PMID:37923718   PMID:38019650   PMID:38086857   PMID:38100351  
PMID:38134596   PMID:38266080   PMID:38446664   PMID:38457657   PMID:38471394   PMID:38504307   PMID:38509363   PMID:38512413   PMID:38604990   PMID:38625151   PMID:38722977   PMID:38723629  
PMID:38788712   PMID:38843233   PMID:38918041   PMID:38964330  


Genomics

Comparative Map Data
Ndor1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39225,134,825 - 25,145,458 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl225,134,875 - 25,145,398 (-)EnsemblGRCm39 Ensembl
GRCm39 Ensembl225,134,833 - 25,146,034 (-)EnsemblGRCm39 Ensembl
GRCm39 Ensembl225,134,831 - 25,136,875 (-)EnsemblGRCm39 Ensembl
GRCm38225,244,813 - 25,255,509 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl225,244,819 - 25,246,863 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl225,244,821 - 25,256,022 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl225,244,863 - 25,255,386 (-)EnsemblGRCm38mm10GRCm38
MGSCv37225,100,339 - 25,110,934 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36225,066,828 - 25,077,387 (-)NCBIMGSCv36mm8
Celera224,972,746 - 24,983,340 (-)NCBICelera
Cytogenetic Map2A3NCBI
cM Map217.1NCBI
NDOR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389137,205,700 - 137,219,361 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9137,205,685 - 137,219,361 (+)EnsemblGRCh38hg38GRCh38
GRCh379140,100,152 - 140,113,813 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369139,220,004 - 139,231,282 (+)NCBINCBI36Build 36hg18NCBI36
Build 349137,376,019 - 137,387,297NCBI
Celera9110,614,341 - 110,615,026 (+)NCBICelera
Cytogenetic Map9q34.3NCBI
HuRef9109,559,921 - 109,573,527 (+)NCBIHuRef
CHM1_19140,248,853 - 140,262,545 (+)NCBICHM1_1
T2T-CHM13v2.09149,443,371 - 149,457,030 (+)NCBIT2T-CHM13v2.0
Ndor1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8328,460,787 - 28,469,018 (-)NCBIGRCr8
mRatBN7.238,062,629 - 8,070,873 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl38,062,630 - 8,070,860 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx311,167,351 - 11,175,571 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0319,753,581 - 19,761,801 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0317,943,424 - 17,951,644 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.032,466,698 - 2,474,928 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl32,466,544 - 2,474,913 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.032,448,115 - 2,456,341 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.433,412,739 - 3,420,959 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.133,413,205 - 3,420,939 (-)NCBI
Celera32,889,188 - 2,897,408 (-)NCBICelera
Cytogenetic Map3p13NCBI
Ndor1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555135,208,151 - 5,216,182 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555135,208,040 - 5,216,618 (+)NCBIChiLan1.0ChiLan1.0
NDOR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2112,180,314 - 2,193,958 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan192,182,647 - 2,196,253 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v09108,265,305 - 108,278,923 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19137,233,940 - 137,247,716 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9137,233,940 - 137,247,716 (+)Ensemblpanpan1.1panPan2
NDOR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1948,456,256 - 48,464,930 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl948,455,260 - 48,464,970 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha947,642,479 - 47,651,156 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0949,317,332 - 49,326,009 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl949,317,352 - 49,326,478 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1948,093,734 - 48,102,409 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0948,392,545 - 48,401,222 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0948,439,704 - 48,448,380 (-)NCBIUU_Cfam_GSD_1.0
Ndor1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947202,588,594 - 202,601,564 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936669773,472 - 782,292 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936669773,494 - 782,286 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDOR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.21314,156,414 - 314,164,176 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NDOR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.112970,256 - 983,893 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl12973,078 - 983,791 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660584,321,782 - 4,335,685 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ndor1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624760737,583 - 746,357 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624760738,110 - 746,417 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ndor1
470 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4831
Count of miRNA genes:855
Interacting mature miRNAs:1143
Transcripts:ENSMUST00000100329, ENSMUST00000114349, ENSMUST00000123472, ENSMUST00000129705, ENSMUST00000132128, ENSMUST00000132591, ENSMUST00000137355, ENSMUST00000141808, ENSMUST00000147866, ENSMUST00000148589, ENSMUST00000156056, ENSMUST00000162680
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552706Cia24_mcollagen induced arthritis QTL 24 (mouse)Not determined22467911533523172Mouse
8552707Cia23_mcollagen induced arthritis QTL 23 (mouse)Not determined21212953766556453Mouse
4142333Tgq10_mtriglyceride QTL 10 (mouse)Not determined125324559Mouse
1300624Insq7_minsulin QTL 7 (mouse)Not determined2938444643384575Mouse
8552705Cia25_mcollagen induced arthritis 25 (mouse)Not determined22467911533523172Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
26884438Sklq12_mskull length QTL 12, 16 week (mouse)22459001254890012Mouse
1301790Pcfm1_mperiosteal circumference and femur length 1 (mouse)Not determined2823629642236396Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
1301980Fcsa5_mfemoral cross-sectional area 5 (mouse)Not determined2767911541679261Mouse
1301376Etohc1_methanol consumption 1 (mouse)Not determined22112972555129871Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
12792980Fbmd1_mfemoral bone mineral density 1, females only (mouse)22503449245034492Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1301641Sbmd2_mspinal bone mineral density 2 (mouse)Not determined21421456748214713Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1301838Sluc16_msusceptibility to lung cancer 16 (mouse)Not determined2126529589Mouse
10755513Amzn4_manatomical modifier of Zfp423 4 (mouse)2938444643384575Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
12904743Carcdq3_mcardiac collagen deposition QTL 3 (mouse)2323494028179150Mouse
13463470Tubisq1_mtubulointerstitial injury severity, QTL 1 (mouse)22368914557689269Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
4141836Tgq11_mtriglyceride QTL 11 (mouse)Not determined125324559Mouse
4141708Pbwg1.2_mpostnatal body weight growth 1.2 (mouse)Not determined2112972555129871Mouse
10043876Adip22_madiposity 22 (mouse)Not determined2830805142308240Mouse
12903993Opfaq1_mopen field activity QTL 1 (mouse)2967669127022642Mouse

Markers in Region
RH141138  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38225,256,029 - 25,256,249UniSTSGRCm38
MGSCv37225,111,549 - 25,111,769UniSTSGRCm37
Celera224,983,955 - 24,984,175UniSTS
Cytogenetic Map2A3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001082476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003953749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_374138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_374139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_374141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_866028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_866029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK019617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK143124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL732309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ771207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD354207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000100329   ⟹   ENSMUSP00000097903
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl225,134,833 - 25,145,395 (-)Ensembl
GRCm38.p6 Ensembl225,244,821 - 25,255,383 (-)Ensembl
Ensembl Acc Id: ENSMUST00000114349   ⟹   ENSMUSP00000109989
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl225,137,241 - 25,145,421 (-)Ensembl
GRCm38.p6 Ensembl225,247,229 - 25,255,409 (-)Ensembl
Ensembl Acc Id: ENSMUST00000123472
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl225,139,512 - 25,140,354 (-)Ensembl
GRCm38.p6 Ensembl225,249,500 - 25,250,342 (-)Ensembl
Ensembl Acc Id: ENSMUST00000129705
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl225,137,599 - 25,138,483 (-)Ensembl
GRCm38.p6 Ensembl225,247,587 - 25,248,471 (-)Ensembl
Ensembl Acc Id: ENSMUST00000132128   ⟹   ENSMUSP00000125018
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl225,141,760 - 25,146,034 (-)Ensembl
GRCm38.p6 Ensembl225,251,748 - 25,256,022 (-)Ensembl
Ensembl Acc Id: ENSMUST00000132591
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl225,140,187 - 25,145,380 (-)Ensembl
GRCm38.p6 Ensembl225,250,175 - 25,255,368 (-)Ensembl
Ensembl Acc Id: ENSMUST00000137355
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl225,141,500 - 25,145,273 (-)Ensembl
GRCm38.p6 Ensembl225,251,488 - 25,255,261 (-)Ensembl
Ensembl Acc Id: ENSMUST00000141808   ⟹   ENSMUSP00000123247
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl225,139,484 - 25,145,358 (-)Ensembl
GRCm38.p6 Ensembl225,249,472 - 25,255,346 (-)Ensembl
Ensembl Acc Id: ENSMUST00000147866   ⟹   ENSMUSP00000125259
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl225,140,136 - 25,145,428 (-)Ensembl
GRCm38.p6 Ensembl225,250,124 - 25,255,416 (-)Ensembl
Ensembl Acc Id: ENSMUST00000148589   ⟹   ENSMUSP00000123958
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl225,137,440 - 25,145,398 (-)Ensembl
GRCm38.p6 Ensembl225,247,428 - 25,255,386 (-)Ensembl
Ensembl Acc Id: ENSMUST00000228052   ⟹   ENSMUSP00000154261
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl225,134,875 - 25,145,398 (-)Ensembl
GRCm38.p6 Ensembl225,244,863 - 25,255,386 (-)Ensembl
Ensembl Acc Id: ENSMUST00000228627   ⟹   ENSMUSP00000153819
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl225,134,831 - 25,136,875 (-)Ensembl
GRCm38.p6 Ensembl225,244,819 - 25,246,863 (-)Ensembl
RefSeq Acc Id: NM_001082476   ⟹   NP_001075945
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,426 (-)NCBI
GRCm38225,244,813 - 25,255,414 (-)NCBI
MGSCv37225,100,339 - 25,110,934 (-)RGD
Celera224,972,740 - 24,983,340 (-)ENTREZGENE
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252541   ⟹   NP_001239470
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,426 (-)NCBI
GRCm38225,244,813 - 25,255,414 (-)NCBI
Celera224,972,740 - 24,983,340 (-)ENTREZGENE
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252542   ⟹   NP_001239471
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,426 (-)NCBI
GRCm38225,244,813 - 25,255,414 (-)NCBI
Celera224,972,740 - 24,983,340 (-)ENTREZGENE
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006498441   ⟹   XP_006498504
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
GRCm38225,244,813 - 25,255,425 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006498442   ⟹   XP_006498505
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,831 - 25,145,458 (-)NCBI
GRCm38225,244,819 - 25,255,425 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006498443   ⟹   XP_006498506
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,833 - 25,145,458 (-)NCBI
GRCm38225,244,819 - 25,255,425 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006498444   ⟹   XP_006498507
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
GRCm38225,244,813 - 25,255,426 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006498445   ⟹   XP_006498508
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
GRCm38225,244,813 - 25,255,426 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006498446   ⟹   XP_006498509
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
GRCm38225,244,813 - 25,255,423 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006498447   ⟹   XP_006498510
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
GRCm38225,244,813 - 25,255,425 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006498448   ⟹   XP_006498511
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,416 (-)NCBI
GRCm38225,244,813 - 25,255,413 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006498450   ⟹   XP_006498513
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
GRCm38225,244,813 - 25,255,425 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006498451   ⟹   XP_006498514
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
GRCm38225,244,813 - 25,255,425 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006498452   ⟹   XP_006498515
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,426 (-)NCBI
GRCm38225,244,813 - 25,255,509 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006498455   ⟹   XP_006498518
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
GRCm38225,244,813 - 25,255,423 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252251   ⟹   XP_030108111
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,833 - 25,145,416 (-)NCBI
GRCm38225,244,819 - 25,255,414 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252252   ⟹   XP_030108112
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,418 (-)NCBI
GRCm38225,244,813 - 25,255,418 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252253   ⟹   XP_030108113
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,392 (-)NCBI
GRCm38225,244,813 - 25,255,395 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162726   ⟹   XP_036018619
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162727   ⟹   XP_036018620
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,831 - 25,145,415 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003953749
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,833 - 25,145,458 (-)NCBI
GRCm38225,244,819 - 25,255,425 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004940777
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004940778
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004940779
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004940780
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004940781
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,825 - 25,145,458 (-)NCBI
Sequence:
RefSeq Acc Id: XR_374138
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,833 - 25,145,458 (-)NCBI
GRCm38225,244,819 - 25,255,425 (-)NCBI
Sequence:
RefSeq Acc Id: XR_374139
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,134,833 - 25,145,458 (-)NCBI
GRCm38225,244,819 - 25,255,426 (-)NCBI
Sequence:
RefSeq Acc Id: XR_374141
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,138,405 - 25,145,458 (-)NCBI
GRCm38225,244,819 - 25,255,425 (-)NCBI
Sequence:
RefSeq Acc Id: XR_866028
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,136,740 - 25,145,458 (-)NCBI
GRCm38225,246,733 - 25,255,425 (-)NCBI
Sequence:
RefSeq Acc Id: XR_866029
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39225,136,590 - 25,145,458 (-)NCBI
GRCm38225,246,513 - 25,255,425 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001075945 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239470 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239471 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498504 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498505 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498506 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498507 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498508 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498509 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498510 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498511 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498513 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498514 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498515 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498518 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108111 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108112 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108113 (Get FASTA)   NCBI Sequence Viewer  
  XP_036018619 (Get FASTA)   NCBI Sequence Viewer  
  XP_036018620 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein A2AI05 (Get FASTA)   NCBI Sequence Viewer  
  AAH49789 (Get FASTA)   NCBI Sequence Viewer  
  BAE37235 (Get FASTA)   NCBI Sequence Viewer  
  BAE41435 (Get FASTA)   NCBI Sequence Viewer  
  EDL08219 (Get FASTA)   NCBI Sequence Viewer  
  EDL08220 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000097903
  ENSMUSP00000097903.4
  ENSMUSP00000109989
  ENSMUSP00000109989.3
  ENSMUSP00000123247.2
  ENSMUSP00000123958.2
  ENSMUSP00000125018.2
  ENSMUSP00000125259.2
  ENSMUSP00000153819.3
  ENSMUSP00000154261
  ENSMUSP00000154261.2
RefSeq Acc Id: NP_001075945   ⟸   NM_001082476
- Peptide Label: isoform 1
- UniProtKB: Q3TQZ6 (UniProtKB/Swiss-Prot),   Q80WC5 (UniProtKB/Swiss-Prot),   A2AI05 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001239470   ⟸   NM_001252541
- Peptide Label: isoform 2
- UniProtKB: A2AI05 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001239471   ⟸   NM_001252542
- Peptide Label: isoform 3
- UniProtKB: A0A2I3BQN1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006498518   ⟸   XM_006498455
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_006498505   ⟸   XM_006498442
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006498504   ⟸   XM_006498441
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006498509   ⟸   XM_006498446
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006498515   ⟸   XM_006498452
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_006498511   ⟸   XM_006498448
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_006498510   ⟸   XM_006498447
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006498514   ⟸   XM_006498451
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_006498508   ⟸   XM_006498445
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006498513   ⟸   XM_006498450
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_006498507   ⟸   XM_006498444
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006498506   ⟸   XM_006498443
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_030108112   ⟸   XM_030252252
- Peptide Label: isoform X13
RefSeq Acc Id: XP_030108113   ⟸   XM_030252253
- Peptide Label: isoform X13
RefSeq Acc Id: XP_030108111   ⟸   XM_030252251
- Peptide Label: isoform X9
Ensembl Acc Id: ENSMUSP00000125259   ⟸   ENSMUST00000147866
Ensembl Acc Id: ENSMUSP00000125018   ⟸   ENSMUST00000132128
Ensembl Acc Id: ENSMUSP00000154261   ⟸   ENSMUST00000228052
Ensembl Acc Id: ENSMUSP00000097903   ⟸   ENSMUST00000100329
Ensembl Acc Id: ENSMUSP00000123958   ⟸   ENSMUST00000148589
Ensembl Acc Id: ENSMUSP00000109989   ⟸   ENSMUST00000114349
Ensembl Acc Id: ENSMUSP00000153819   ⟸   ENSMUST00000228627
Ensembl Acc Id: ENSMUSP00000123247   ⟸   ENSMUST00000141808
RefSeq Acc Id: XP_036018619   ⟸   XM_036162726
- Peptide Label: isoform X11
RefSeq Acc Id: XP_036018620   ⟸   XM_036162727
- Peptide Label: isoform X12
Protein Domains
FAD-binding FR-type   Flavodoxin-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A2AI05-F1-model_v2 AlphaFold A2AI05 1-598 view protein structure

Promoters
RGD ID:6831897
Promoter ID:MM_KWN:28113
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:OTTMUST00000028042,   OTTMUST00000028060
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36225,103,561 - 25,104,662 (-)MPROMDB
RGD ID:6831895
Promoter ID:MM_KWN:28114
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000028041
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36225,105,761 - 25,106,261 (-)MPROMDB
RGD ID:6831894
Promoter ID:MM_KWN:28115
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   ES_Cell,   Lung
Transcripts:ENSMUST00000006640,   ENSMUST00000100329,   ENSMUST00000114342,   NM_001082476,   OTTMUST00000028035,   OTTMUST00000028036,   OTTMUST00000028037,   OTTMUST00000028038,   OTTMUST00000028039,   OTTMUST00000028040,   UC008IQX.1,   UC008IQY.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36225,110,621 - 25,111,121 (-)MPROMDB
RGD ID:6876564
Promoter ID:EPDNEW_M1733
Type:initiation region
Name:Ndor1_1
Description:Mus musculus NADPH dependent diflavin oxidoreductase 1 , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38225,255,383 - 25,255,443EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1926047 AgrOrtholog
Ensembl Genes ENSMUSG00000006471 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSMUSG00000115018 Ensembl, UniProtKB/TrEMBL
  ENSMUSG00000115074 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000100329 ENTREZGENE
  ENSMUST00000100329.10 UniProtKB/Swiss-Prot
  ENSMUST00000114349 ENTREZGENE
  ENSMUST00000114349.9 UniProtKB/Swiss-Prot
  ENSMUST00000132128.3 UniProtKB/TrEMBL
  ENSMUST00000141808.8 UniProtKB/TrEMBL
  ENSMUST00000147866.2 UniProtKB/TrEMBL
  ENSMUST00000148589.9 UniProtKB/TrEMBL
  ENSMUST00000228052 ENTREZGENE
  ENSMUST00000228052.2 UniProtKB/TrEMBL
  ENSMUST00000228627.3 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.360 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.80 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Translation factors UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CysJ-like_FAD-binding UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FAD-bd_FR_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Flavdoxin-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Flavodoxin/NO_synth UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Flavoprot_Pyr_Nucl_cyt_Rdtase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Flavoprotein-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FNR_nucleotide-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NADPH_Cyt_P450_Rdtase_alpha UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NDOR1 UniProtKB/Swiss-Prot
  OxRdtase_FAD/NAD-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Riboflavin_synthase-like_b-brl UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:78797 UniProtKB/Swiss-Prot
MGD MGI:1926047 ENTREZGENE
NCBI Gene 78797 ENTREZGENE
PANTHER NADPH-DEPENDENT DIFLAVIN OXIDOREDUCTASE 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NITRIC OXIDE SYNTHASE-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam FAD_binding_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Flavodoxin_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NAD_binding_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ndor1 PhenoGen
PRINTS FLAVODOXIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FPNCR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE FAD_FR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FLAVODOXIN_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52218 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF52343 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF63380 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A2I3BPW1_MOUSE UniProtKB/TrEMBL
  A0A2I3BQN1 ENTREZGENE, UniProtKB/TrEMBL
  A2AI05 ENTREZGENE
  E0CX27_MOUSE UniProtKB/TrEMBL
  E0CXI9_MOUSE UniProtKB/TrEMBL
  E0CYR1_MOUSE UniProtKB/TrEMBL
  F6XCS1_MOUSE UniProtKB/TrEMBL
  NDOR1_MOUSE UniProtKB/Swiss-Prot
  Q3TQZ6 ENTREZGENE
  Q80WC5 ENTREZGENE
UniProt Secondary Q3TQZ6 UniProtKB/Swiss-Prot
  Q80WC5 UniProtKB/Swiss-Prot