Wbp11 (WW domain binding protein 11) - Rat Genome Database

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Gene: Wbp11 (WW domain binding protein 11) Mus musculus
Analyze
Symbol: Wbp11
Name: WW domain binding protein 11
RGD ID: 1317379
MGI Page MGI
Description: Enables protein phosphatase regulator activity. Acts upstream of or within RNA splicing. Located in cytoplasm and nuclear speck. Is expressed in several structures, including blood; embryo ectoderm; embryo mesenchyme; extraembryonic component; and heart. Orthologous to human WBP11 (WW domain binding protein 11).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2510026P17Rik; D6Wsu113; D6Wsu113e; Np; Npw38-binding protein; Npwbp; S; SIPP1; splicing factor that interacts with PQBP-1 and PP1; WBP-11; WW domain-binding protein 11
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm6011   Gm6786   Gm9245  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396136,790,652 - 136,805,214 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6136,790,652 - 136,805,231 (-)EnsemblGRCm39 Ensembl
GRCm386136,813,654 - 136,828,216 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6136,813,654 - 136,828,233 (-)EnsemblGRCm38mm10GRCm38
MGSCv376136,762,175 - 136,776,737 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366136,777,852 - 136,792,324 (-)NCBIMGSCv36mm8
Celera6139,822,906 - 139,837,714 (-)NCBICelera
Cytogenetic Map6G1NCBI
cM Map666.72NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9724750   PMID:9811942   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12904583   PMID:14640981   PMID:14729942   PMID:15489334  
PMID:15782199   PMID:16141072   PMID:16141073   PMID:16162498   PMID:17967808   PMID:18799693   PMID:21873635   PMID:26496610   PMID:28671696   PMID:32968282   PMID:33276377  


Genomics

Comparative Map Data
Wbp11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396136,790,652 - 136,805,214 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6136,790,652 - 136,805,231 (-)EnsemblGRCm39 Ensembl
GRCm386136,813,654 - 136,828,216 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6136,813,654 - 136,828,233 (-)EnsemblGRCm38mm10GRCm38
MGSCv376136,762,175 - 136,776,737 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366136,777,852 - 136,792,324 (-)NCBIMGSCv36mm8
Celera6139,822,906 - 139,837,714 (-)NCBICelera
Cytogenetic Map6G1NCBI
cM Map666.72NCBI
WBP11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381214,784,582 - 14,803,478 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1214,784,582 - 14,803,486 (-)EnsemblGRCh38hg38GRCh38
GRCh371214,937,516 - 14,956,412 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361214,830,679 - 14,847,668 (-)NCBINCBI36Build 36hg18NCBI36
Build 341214,830,680 - 14,847,668NCBI
Celera1220,084,400 - 20,101,388 (-)NCBICelera
Cytogenetic Map12p12.3NCBI
HuRef1214,708,868 - 14,725,858 (-)NCBIHuRef
CHM1_11214,905,505 - 14,922,494 (-)NCBICHM1_1
T2T-CHM13v2.01214,661,939 - 14,680,843 (-)NCBIT2T-CHM13v2.0
Wbp11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84171,412,187 - 171,425,634 (-)NCBIGRCr8
mRatBN7.24169,680,984 - 169,694,431 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4169,680,983 - 169,694,443 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4175,975,711 - 175,989,125 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04171,757,453 - 171,770,900 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04170,381,374 - 170,394,788 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04170,772,166 - 170,785,613 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4170,772,163 - 170,810,080 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl4170,154,227 - 170,186,942 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04234,414,445 - 234,427,903 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44173,823,936 - 173,837,308 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14174,069,061 - 174,082,432 (-)NCBI
Celera4158,264,513 - 158,277,960 (-)NCBICelera
Cytogenetic Map4q43NCBI
Wbp11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541311,533,303 - 11,549,067 (-)NCBIChiLan1.0ChiLan1.0
WBP11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21020,238,017 - 20,257,509 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11220,234,778 - 20,252,538 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01214,791,495 - 14,809,460 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11215,189,323 - 15,206,377 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1215,189,323 - 15,206,377 (-)Ensemblpanpan1.1panPan2
WBP11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12731,805,590 - 31,822,602 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2731,805,590 - 31,821,147 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2714,626,424 - 14,643,484 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02732,114,165 - 32,129,069 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12732,001,615 - 32,018,608 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02731,960,078 - 31,977,326 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02714,358,481 - 14,375,518 (-)NCBIUU_Cfam_GSD_1.0
Wbp11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494592,945,542 - 92,959,156 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365872,673,206 - 2,687,298 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WBP11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1557,749,948 - 57,766,788 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2561,196,695 - 61,205,103 (+)NCBISscrofa10.2Sscrofa10.2susScr3
WBP11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11114,686,047 - 14,704,172 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1114,686,636 - 14,704,127 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606920,606,064 - 20,624,173 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wbp11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475223,220,021 - 23,235,739 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Wbp11
791 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:708
Count of miRNA genes:480
Interacting mature miRNAs:549
Transcripts:ENSMUST00000116514, ENSMUST00000127178, ENSMUST00000129078, ENSMUST00000141598, ENSMUST00000146348, ENSMUST00000151333
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142079Skmw15_mskeletal muscle weight 15 (mouse)Not determined6116829851149588044Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112246918146954059Mouse
10449437Pas15_mpulmonary adenoma susceptibility 15 (mouse)6128180868149588044Mouse
10449436Pas17_mpulmonary adenoma susceptibility 17 (mouse)6124334273145601739Mouse
1301658Radpf3_mradiation pulmonary fibrosis 3 (mouse)Not determined6115219814146330736Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96632912146535124Mouse
4140980Mvwf2_mmodifier of von Willebrand factor 2 (mouse)Not determined114345693145601739Mouse
1301084Bpq5_mblood pressure QTL 5 (mouse)Not determined6129330484149588044Mouse
14746990Manh61_mmandible shape 61 (mouse)6130156355149588044Mouse
4141295Rua_mraffinose acetate tasting (mouse)Not determined115546805149549364Mouse
10766452Sle23_msystematic lupus erythematosus susceptibility 23 (mouse)6128601582149588044Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
14746999Mancz6_mmandible centroid size 6 (mouse)6130156355149588044Mouse
1302089Wta2_mweight adult 2 (mouse)Not determined6125269523149588044Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698483798145881170Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692584287146330736Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
1301686Trmq1_mT cell ratio modifier QTL 1 (mouse)Not determined6129330484149588044Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696632912146535124Mouse
1301620Insq8_minsulin QTL 8 (mouse)Not determined6129534979149588044Mouse
12879916Shm5_msperm head morphology 5 (mouse)6132266532145601739Mouse
10053680Lith25_mlithogenic gene 25 (mouse)Not determined6128601582149588044Mouse
10412215Cmv3_mcytomegalovirus resistance 3 (mouse)Not determined6128811857137416927Mouse
4141974Skmw14_mskeletal muscle weight 14 (mouse)Not determined6129330484149588044Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96632912146535124Mouse
1301820Mop1_mmorphine preference 1 (mouse)Not determined6132578005146330736Mouse
1301027Hdlq12_mHDL QTL 12 (mouse)Not determined6128601582149588044Mouse
10412207Cypr5_mcytokine production 5 (mouse)Not determined6110815180144815323Mouse
1301152Athsq2_matherosclerosis susceptibility QTL 2 (mouse)Not determined6117059949149588044Mouse
13463481Mcvq14_mmean corpuscular volume QTL 14 (mouse)6111142448145142541Mouse
1301927Etohcta6_methanol conditioned taste aversion 6 (mouse)Not determined6115578005149578150Mouse
4141194Cyx_mcycloheximide tasting (mouse)Not determined115546805149549364Mouse
1558959Eamcd2_mexperimental autoimmune myocarditis 2 (mouse)Not determined6129953954149588044Mouse
4141889Qui_mquinine sensitivity, taste (mouse)Not determined115546805149549364Mouse
1301804Bulb2_mbulb size 2 (mouse)Not determined6120416806149588044Mouse

Markers in Region
RH124863  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386136,813,682 - 136,813,772UniSTSGRCm38
MGSCv376136,762,203 - 136,762,293UniSTSGRCm37
Celera6139,822,934 - 139,823,024UniSTS
Cytogenetic Map6G1UniSTS
cM Map666.5UniSTS
RH125848  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386136,813,657 - 136,813,906UniSTSGRCm38
MGSCv376136,762,178 - 136,762,427UniSTSGRCm37
Celera6139,822,909 - 139,823,158UniSTS
Cytogenetic Map6G1UniSTS
cM Map666.5UniSTS
Whitehead/MRC_RH61347.0UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_021714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF071186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC104145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000116514   ⟹   ENSMUSP00000112213
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,790,652 - 136,805,231 (-)Ensembl
GRCm38.p6 Ensembl6136,813,654 - 136,828,233 (-)Ensembl
Ensembl Acc Id: ENSMUST00000129078
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,802,105 - 136,803,093 (-)Ensembl
GRCm38.p6 Ensembl6136,825,107 - 136,826,095 (-)Ensembl
Ensembl Acc Id: ENSMUST00000141598
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,801,353 - 136,805,133 (-)Ensembl
GRCm38.p6 Ensembl6136,824,355 - 136,828,135 (-)Ensembl
Ensembl Acc Id: ENSMUST00000146348   ⟹   ENSMUSP00000145155
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,802,514 - 136,804,734 (-)Ensembl
GRCm38.p6 Ensembl6136,825,516 - 136,827,736 (-)Ensembl
Ensembl Acc Id: ENSMUST00000151333
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,796,726 - 136,805,141 (-)Ensembl
GRCm38.p6 Ensembl6136,819,728 - 136,828,143 (-)Ensembl
Ensembl Acc Id: ENSMUST00000204129   ⟹   ENSMUSP00000144977
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,793,949 - 136,798,212 (-)Ensembl
GRCm38.p6 Ensembl6136,816,951 - 136,821,214 (-)Ensembl
Ensembl Acc Id: ENSMUST00000204272   ⟹   ENSMUSP00000145501
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,794,174 - 136,805,134 (-)Ensembl
GRCm38.p6 Ensembl6136,817,176 - 136,828,136 (-)Ensembl
RefSeq Acc Id: NM_021714   ⟹   NP_068360
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396136,790,652 - 136,805,214 (-)NCBI
GRCm386136,813,654 - 136,828,216 (-)ENTREZGENE
MGSCv376136,762,175 - 136,776,737 (-)RGD
Celera6139,822,906 - 139,837,714 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017321693   ⟹   XP_017177182
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396136,790,703 - 136,805,139 (-)NCBI
GRCm386136,813,705 - 136,828,141 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255522   ⟹   XP_030111382
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396136,790,703 - 136,805,138 (-)NCBI
GRCm386136,813,705 - 136,828,140 (-)NCBI
Sequence:
RefSeq Acc Id: NP_068360   ⟸   NM_021714
- UniProtKB: Q3UMD8 (UniProtKB/Swiss-Prot),   O88539 (UniProtKB/Swiss-Prot),   Q8VDI0 (UniProtKB/Swiss-Prot),   Q923D5 (UniProtKB/Swiss-Prot),   Q3U6Q1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177182   ⟸   XM_017321693
- Peptide Label: isoform X1
- UniProtKB: Q3UMD8 (UniProtKB/Swiss-Prot),   O88539 (UniProtKB/Swiss-Prot),   Q8VDI0 (UniProtKB/Swiss-Prot),   Q923D5 (UniProtKB/Swiss-Prot),   Q3U6Q1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030111382   ⟸   XM_030255522
- Peptide Label: isoform X1
- UniProtKB: Q923D5 (UniProtKB/Swiss-Prot),   Q3UMD8 (UniProtKB/Swiss-Prot),   O88539 (UniProtKB/Swiss-Prot),   Q8VDI0 (UniProtKB/Swiss-Prot),   Q3U6Q1 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000144977   ⟸   ENSMUST00000204129
Ensembl Acc Id: ENSMUSP00000145501   ⟸   ENSMUST00000204272
Ensembl Acc Id: ENSMUSP00000145155   ⟸   ENSMUST00000146348
Ensembl Acc Id: ENSMUSP00000112213   ⟸   ENSMUST00000116514

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q923D5-F1-model_v2 AlphaFold Q923D5 1-641 view protein structure

Promoters
RGD ID:6840156
Promoter ID:MM_KWN:48038
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0
Transcripts:OTTMUST00000056897,   OTTMUST00000056898
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366136,775,211 - 136,775,711 (-)MPROMDB
RGD ID:6840157
Promoter ID:MM_KWN:48039
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Lung
Transcripts:ENSMUST00000032340,   ENSMUST00000116514,   OTTMUST00000056894,   OTTMUST00000056895,   OTTMUST00000056896
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366136,776,414 - 136,776,914 (-)MPROMDB
RGD ID:6891346
Promoter ID:EPDNEW_M9124
Type:multiple initiation site
Name:Wbp11_2
Description:Mus musculus WW domain binding protein 11 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M9125  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386136,826,094 - 136,826,154EPDNEW
RGD ID:6891348
Promoter ID:EPDNEW_M9125
Type:initiation region
Name:Wbp11_1
Description:Mus musculus WW domain binding protein 11 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M9124  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386136,828,141 - 136,828,201EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1891823 AgrOrtholog
Ensembl Genes ENSMUSG00000030216 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000116514 ENTREZGENE
  ENSMUST00000116514.4 UniProtKB/Swiss-Prot
  ENSMUST00000146348.4 UniProtKB/TrEMBL
  ENSMUST00000204129.2 UniProtKB/TrEMBL
  ENSMUST00000204272.3 UniProtKB/TrEMBL
InterPro WW_dom-bd_prot_11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:60321 UniProtKB/Swiss-Prot
MGD MGI:1891823 ENTREZGENE
NCBI Gene 60321 ENTREZGENE
PANTHER PTHR13361 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WW DOMAIN-BINDING PROTEIN 11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Wbp11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Wbp11 PhenoGen
UniProt A0A0N4SV69_MOUSE UniProtKB/TrEMBL
  A0A0N4SVL7_MOUSE UniProtKB/TrEMBL
  A0A0N4SWF7_MOUSE UniProtKB/TrEMBL
  A0AUK1_MOUSE UniProtKB/TrEMBL
  O88539 ENTREZGENE
  Q3TXH8_MOUSE UniProtKB/TrEMBL
  Q3U521_MOUSE UniProtKB/TrEMBL
  Q3U6Q1 ENTREZGENE, UniProtKB/TrEMBL
  Q3UKQ3_MOUSE UniProtKB/TrEMBL
  Q3UMD8 ENTREZGENE
  Q8VDI0 ENTREZGENE
  Q923D5 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary O88539 UniProtKB/Swiss-Prot
  Q3UMD8 UniProtKB/Swiss-Prot
  Q8VDI0 UniProtKB/Swiss-Prot