Ing5 (inhibitor of growth family, member 5) - Rat Genome Database

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Gene: Ing5 (inhibitor of growth family, member 5) Mus musculus
Analyze
Symbol: Ing5
Name: inhibitor of growth family, member 5
RGD ID: 1317374
MGI Page MGI
Description: Enables chromatin binding activity. Acts upstream of or within negative regulation of fibroblast proliferation and positive regulation of apoptotic signaling pathway. Predicted to be located in nucleoplasm. Predicted to be part of MOZ/MORF histone acetyltransferase complex. Predicted to be active in nucleus. Is expressed in 1st branchial arch maxillary component; central nervous system; early conceptus; eye; and genitourinary system. Orthologous to human ING5 (inhibitor of growth family member 5).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1700001C14Rik; 1700027H23Rik; 1810018M11Rik; AI225768; inhibitor of growth protein 5
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39193,731,648 - 93,749,823 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl193,731,687 - 93,749,823 (+)EnsemblGRCm39 Ensembl
GRCm38193,803,926 - 93,822,101 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl193,803,965 - 93,822,101 (+)EnsemblGRCm38mm10GRCm38
MGSCv37195,700,542 - 95,718,678 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36195,634,371 - 95,652,507 (+)NCBIMGSCv36mm8
Celera196,750,076 - 96,766,171 (+)NCBICelera
Cytogenetic Map1DNCBI
cM Map147.34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:14610273   PMID:14681479   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16387653  
PMID:17967808   PMID:18287559   PMID:20059953   PMID:20412781   PMID:21267068   PMID:21750715   PMID:21873635   PMID:22921202   PMID:29326045   PMID:31077711   PMID:31838455   PMID:32325033  
PMID:37275850   PMID:38355793   PMID:38446206  


Genomics

Comparative Map Data
Ing5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39193,731,648 - 93,749,823 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl193,731,687 - 93,749,823 (+)EnsemblGRCm39 Ensembl
GRCm38193,803,926 - 93,822,101 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl193,803,965 - 93,822,101 (+)EnsemblGRCm38mm10GRCm38
MGSCv37195,700,542 - 95,718,678 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36195,634,371 - 95,652,507 (+)NCBIMGSCv36mm8
Celera196,750,076 - 96,766,171 (+)NCBICelera
Cytogenetic Map1DNCBI
cM Map147.34NCBI
ING5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382241,687,020 - 241,729,478 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2241,687,085 - 241,729,478 (+)EnsemblGRCh38hg38GRCh38
GRCh372242,626,435 - 242,668,893 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362242,290,129 - 242,317,569 (+)NCBINCBI36Build 36hg18NCBI36
Build 342242,361,445 - 242,388,884NCBI
Celera2236,316,253 - 236,341,094 (+)NCBICelera
Cytogenetic Map2q37.3NCBI
HuRef2234,396,720 - 234,424,015 (+)NCBIHuRef
CHM1_12242,647,558 - 242,674,989 (+)NCBICHM1_1
T2T-CHM13v2.02242,190,352 - 242,233,501 (+)NCBIT2T-CHM13v2.0
Ing5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89101,772,845 - 101,793,734 (+)NCBIGRCr8
mRatBN7.2994,326,549 - 94,343,392 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl994,326,548 - 94,344,220 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx9102,762,026 - 102,778,869 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09107,897,415 - 107,914,334 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09106,253,524 - 106,270,444 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.09100,932,932 - 100,950,233 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl9100,932,545 - 100,952,416 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.09100,586,087 - 100,603,189 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4993,076,701 - 93,094,002 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1993,281,098 - 93,298,207 (+)NCBI
Celera991,861,169 - 91,878,610 (+)NCBICelera
Cytogenetic Map9q36NCBI
Ing5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955542132,560 - 148,138 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955542135,634 - 160,991 (-)NCBIChiLan1.0ChiLan1.0
ING5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213144,396,425 - 144,439,598 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B144,426,265 - 144,451,842 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B128,979,282 - 129,007,476 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B247,769,128 - 247,793,902 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B247,755,552 - 247,793,893 (+)Ensemblpanpan1.1panPan2
ING5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12551,535,521 - 51,556,264 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2551,534,753 - 51,554,644 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2551,754,641 - 51,775,295 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02551,734,300 - 51,754,948 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2551,734,356 - 51,756,582 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12551,584,130 - 51,604,831 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02551,323,352 - 51,344,051 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02551,600,060 - 51,621,179 (+)NCBIUU_Cfam_GSD_1.0
Ing5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303192,946,863 - 192,962,731 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936745261,450 - 271,943 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936745261,371 - 271,447 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ING5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15140,264,766 - 140,279,010 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115140,264,708 - 140,279,020 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ING5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110127,733,768 - 127,770,794 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10127,746,546 - 127,774,244 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604071,550,856 - 71,575,851 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ing5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248475,648,233 - 5,662,044 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248475,648,199 - 5,659,038 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ing5
594 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1176
Count of miRNA genes:662
Interacting mature miRNAs:794
Transcripts:ENSMUST00000027505
Prediction methods:Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
15039333Nmrs1_mNAFLD-associated magnetic resonance shift 1 (mouse)189786512123786512Mouse
10045976Tir6_mtrypanosome infection response 6 (mouse)Not determined193536855120529678Mouse
1357847Jckm2_mjuvenile cystic kidney modifier 2 (mouse)Not determined174991977133290937Mouse
4141627Bwq7_mbody weight, QTL 7 (mouse)Not determined192940909124497796Mouse
4142394Mssq1_mmandible size and shape QTL 1 (mouse)Not determined73615692107615830Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
1558928Mord2_mmodifier of retinal degeneration 2 (mouse)Not determined177123115110536075Mouse
12879491Hfnq1_mhair follicle number QTL 1 (mouse)193310310123636759Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
14697706Stsl3a_mSalmonella typhimurium susceptibility locus 3a (mouse)17747663795827725Mouse
12790991Aath1_maortic arch atherosclerosis 1 (mouse)186483929120483929Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139132808126445310Mouse
10412238Alpq5_malcohol preference QTL 5 (mouse)Not determined182832635116832635Mouse
1302146Cocrb1_mcocaine related behavior 1 (mouse)Not determined170133533104139557Mouse
1357760Synch3_msynechia 3 (mouse)Not determined192901442126901550Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
4141347Reb1_mrepetitive behavior 1 (mouse)Not determined91468266100413667Mouse
12791004Aath7_maortic arch atherosclerosis 7 (mouse)182832635116832635Mouse
4141725Wbcq4_mwhite blood cell quantitative locus 4 (mouse)Not determined179858683113858791Mouse
12050069Nabq1_mnasal bone morphology QTL 1 (mouse)179858683113858791Mouse
1300976Bmd19_mbone mineral density 19 (mouse)Not determined173266214108838414Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
4141914Gcsfis_mG-CSF induced splenomegaly (mouse)Not determined74516235148715579Mouse
27095928Pglq6_mpelvic girdle length QTL 6, 10 week (mouse)175976637148775742Mouse
27095931Pglq1_mpelvic girdle length QTL 1, 5 week (mouse)175976637128527737Mouse
13452395Leusq2_mleucocytosis susceptibility QTL 2 (mouse)180245593126386517Mouse
1301748Abbp1_mA/J and C57BL/6 blood pressure 1 (mouse)Not determined162946755120529678Mouse
1301304Hrq3_mheart rate quantitative locus 3 (mouse)Not determined173615692107615830Mouse
1357439Popoa_mpremature ovulation and primary oocyte arrest (mouse)Not determined182643189135615379Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173755175147125370Mouse
4141329Mleu1_mmyeloid leukemia survival 1 (mouse)Not determined89786512123786512Mouse
11667074Led2_mlate embryonic death 2 (mouse)185696027117195081Mouse
27095918Ulnl1_mulna length 1, 5 week (mouse)167339159129727737Mouse
1301350Nidd4k_mNidd4 on KK-A (mouse)Not determined782291982147125370Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163920002153557562Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse

Markers in Region
RH135969  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38193,821,436 - 93,821,634UniSTSGRCm38
MGSCv37195,718,013 - 95,718,211UniSTSGRCm37
Celera196,765,506 - 96,765,704UniSTS
Cytogenetic Map1DUniSTS


Sequence


Ensembl Acc Id: ENSMUST00000027505   ⟹   ENSMUSP00000027505
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,731,687 - 93,749,817 (+)Ensembl
GRCm38.p6 Ensembl193,803,965 - 93,822,095 (+)Ensembl
Ensembl Acc Id: ENSMUST00000188402   ⟹   ENSMUSP00000140739
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,731,705 - 93,749,823 (+)Ensembl
GRCm38.p6 Ensembl193,803,983 - 93,822,101 (+)Ensembl
Ensembl Acc Id: ENSMUST00000190476   ⟹   ENSMUSP00000140498
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,732,067 - 93,746,104 (+)Ensembl
GRCm38.p6 Ensembl193,804,345 - 93,818,382 (+)Ensembl
RefSeq Acc Id: NM_025454   ⟹   NP_079730
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39193,731,687 - 93,749,823 (+)NCBI
GRCm38193,803,965 - 93,822,101 (+)NCBI
MGSCv37195,700,542 - 95,718,678 (+)RGD
Celera196,750,076 - 96,766,171 (+)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006529792   ⟹   XP_006529855
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39193,731,648 - 93,749,823 (+)NCBI
GRCm38193,803,926 - 93,822,101 (+)NCBI
Sequence:
RefSeq Acc Id: NP_079730   ⟸   NM_025454
- UniProtKB: Q9D9V8 (UniProtKB/Swiss-Prot),   Q9D8Y8 (UniProtKB/Swiss-Prot),   Q9CV64 (UniProtKB/Swiss-Prot),   Q6P292 (UniProtKB/Swiss-Prot),   Q3UL57 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006529855   ⟸   XM_006529792
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSMUSP00000027505   ⟸   ENSMUST00000027505
Ensembl Acc Id: ENSMUSP00000140498   ⟸   ENSMUST00000190476
Ensembl Acc Id: ENSMUSP00000140739   ⟸   ENSMUST00000188402
Protein Domains
Inhibitor of growth protein N-terminal histone-

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9D8Y8-F1-model_v2 AlphaFold Q9D8Y8 1-240 view protein structure

Promoters
RGD ID:6874576
Promoter ID:EPDNEW_M739
Type:multiple initiation site
Name:Ing5_1
Description:Mus musculus inhibitor of growth family, member 5 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M740  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38193,803,975 - 93,804,035EPDNEW
RGD ID:6874578
Promoter ID:EPDNEW_M740
Type:single initiation site
Name:Ing5_2
Description:Mus musculus inhibitor of growth family, member 5 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M739  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38193,807,354 - 93,807,414EPDNEW
RGD ID:6817942
Promoter ID:MM_KWN:1708
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000027505
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36195,700,291 - 95,701,022 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1922816 AgrOrtholog
Ensembl Genes ENSMUSG00000026283 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000027505 ENTREZGENE
  ENSMUST00000027505.13 UniProtKB/Swiss-Prot
  ENSMUST00000188402.2 UniProtKB/TrEMBL
  ENSMUST00000190476.2 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.40.10 UniProtKB/Swiss-Prot
  6.10.140.1740 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ING_fam UniProtKB/Swiss-Prot
  ING_N_histone-binding UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
  Zinc_finger_PHD-type_CS UniProtKB/Swiss-Prot
  Znf_FYVE_PHD UniProtKB/Swiss-Prot
  Znf_PHD UniProtKB/Swiss-Prot
  Znf_PHD-finger UniProtKB/Swiss-Prot
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot
KEGG Report mmu:66262 UniProtKB/Swiss-Prot
MGD MGI:1922816 ENTREZGENE
NCBI Gene Ing5 ENTREZGENE
PANTHER PTHR10333 UniProtKB/Swiss-Prot
  PTHR10333:SF41 UniProtKB/Swiss-Prot
Pfam ING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ing5 PhenoGen
PROSITE ZF_PHD_1 UniProtKB/Swiss-Prot
  ZF_PHD_2 UniProtKB/Swiss-Prot
SMART ING UniProtKB/Swiss-Prot
  PHD UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57903 UniProtKB/Swiss-Prot
UniProt A0A087WRR4_MOUSE UniProtKB/TrEMBL
  ING5_MOUSE UniProtKB/Swiss-Prot
  Q3UL57 ENTREZGENE
  Q6P292 ENTREZGENE
  Q9CV64 ENTREZGENE
  Q9D8Y8 ENTREZGENE
  Q9D9V8 ENTREZGENE
UniProt Secondary Q3UL57 UniProtKB/Swiss-Prot
  Q6P292 UniProtKB/Swiss-Prot
  Q9CV64 UniProtKB/Swiss-Prot
  Q9D9V8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-26 Ing5  inhibitor of growth family, member 5  1700027H23Rik  RIKEN cDNA 1700027H23 gene  Symbol and/or name updated 27372883 PROVISIONAL
2024-08-21 1700027H23Rik  RIKEN cDNA 1700027H23 gene  Ing5  inhibitor of growth family, member 5  Symbol and/or name change 5135510 APPROVED