Cpne7 (copine VII) - Rat Genome Database

Name: Cpne7
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: Cpne7 (copine VII) Mus musculus

Analyze

Symbol:

Cpne7

Name:

copine VII

RGD ID:

1316678

MGI Page

MGI

Description:

Predicted to enable calcium-dependent phospholipid binding activity. Predicted to be involved in cellular response to calcium ion. Is active in synapse. Is expressed in central nervous system; jaw; and nose. Orthologous to human CPNE7 (copine 7).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

AW047065; copine 7 protein; copine-7

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CPNE7 (copine 7)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Cpne7 (copine 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cpne7 (copine 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CPNE7 (copine 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CPNE7 (copine 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cpne7 (copine 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CPNE7 (copine 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CPNE7 (copine 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CPNE6 (copine 6)	HGNC	OrthoMCL
Homo sapiens (human):	CPNE4 (copine 4)	HGNC	OrthoMCL
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Cpne7 (copine 7)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CPNE7 (copine 7)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cpne7 (copine VII)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Caenorhabditis elegans (roundworm):	gem-4	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Caenorhabditis elegans (roundworm):	nra-1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cpne7	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	123,844,054 - 123,861,924 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	123,844,113 - 123,861,921 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	123,117,313 - 123,135,185 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	123,117,374 - 123,135,182 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	125,641,274 - 125,659,085 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	126,003,547 - 126,021,272 (+)	NCBI		MGSCv36	mm8
Celera	8	127,354,880 - 127,372,744 (+)	NCBI		Celera
Cytogenetic Map	8	E1	NCBI
cM Map	8	72.06	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

16Q24.3 Microdeletion Syndrome (ISO)

autosomal recessive chronic granulomatous disease 4 (ISO)

Fanconi anemia (ISO)

Fanconi anemia complementation group A (ISO)

KBG syndrome (ISO)

primary ciliary dyskinesia 33 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane (ISO)

1,2-dimethylhydrazine (EXP)

17beta-estradiol (ISO)

17beta-estradiol 3-benzoate (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,4-methylenedioxymethamphetamine (EXP)

4,4'-sulfonyldiphenol (EXP)

6-propyl-2-thiouracil (ISO)

acetamide (ISO)

Aflatoxin B2 alpha (ISO)

alpha-Zearalanol (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (ISO)

cadmium dichloride (EXP,ISO)

choline (EXP)

copper atom (ISO)

copper(0) (ISO)

Cuprizon (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

diazinon (ISO)

ethylparaben (ISO)

folic acid (EXP)

fulvestrant (ISO)

genistein (EXP,ISO)

hydrogen peroxide (ISO)

L-methionine (EXP)

lead diacetate (ISO)

lead(0) (ISO)

maneb (EXP)

methoxychlor (ISO)

paracetamol (EXP)

paraquat (EXP,ISO)

perfluorooctanoic acid (ISO)

resveratrol (ISO)

Soman (ISO)

testosterone (ISO)

thiram (ISO)

triclosan (ISO)

trimellitic anhydride (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to calcium ion (IBA,ISO)

Cellular Component

cytoplasm (ISO)

membrane (IEA)

nucleus (ISO)

plasma membrane (IBA,ISO)

synapse (EXP,IDA)

Molecular Function

calcium-dependent phospholipid binding (IBA)

metal ion binding (IEA)

protein binding (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal bone structure (IEA)

abnormal cecum morphology (IEA)

abnormal dental pulp canal morphology (IAGP)

abnormal dental pulp morphology (IAGP)

abnormal dentin morphology (IAGP)

abnormal molar morphology (IAGP)

abnormal odontoblast morphology (IAGP)

abnormal skin morphology (IEA)

early cellular replicative senescence (IAGP)

increased bone mineral content (IEA)

increased dental pulp cell apoptosis (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:9430674	PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:16141072	PMID:16141073	PMID:16602821	PMID:20818386
PMID:21267068	PMID:21873635	PMID:24952961	PMID:30734591	PMID:30863901	PMID:32283105	PMID:32325033	PMID:35660742	PMID:38105557	PMID:38355793

Genomics

Comparative Map Data

Cpne7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	123,844,054 - 123,861,924 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	123,844,113 - 123,861,921 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	123,117,313 - 123,135,185 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	123,117,374 - 123,135,182 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	125,641,274 - 125,659,085 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	126,003,547 - 126,021,272 (+)	NCBI		MGSCv36	mm8
Celera	8	127,354,880 - 127,372,744 (+)	NCBI		Celera
Cytogenetic Map	8	E1	NCBI
cM Map	8	72.06	NCBI

CPNE7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	89,575,758 - 89,597,246 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	89,575,758 - 89,597,246 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	89,642,166 - 89,663,654 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	88,169,677 - 88,191,155 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	88,169,676 - 88,191,154	NCBI
Celera	16	74,705,518 - 74,726,398 (+)	NCBI		Celera
Cytogenetic Map	16	q24.3	NCBI
HuRef	16	75,338,670 - 75,358,493 (+)	NCBI		HuRef
CHM1_1	16	91,053,456 - 91,074,511 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	95,656,186 - 95,677,486 (+)	NCBI		T2T-CHM13v2.0

Cpne7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	68,072,165 - 68,091,197 (+)	NCBI		GRCr8
mRatBN7.2	19	51,164,316 - 51,182,676 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	51,166,034 - 51,182,677 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	57,961,280 - 57,977,864 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	58,641,026 - 58,657,595 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	60,859,881 - 60,876,466 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	55,929,555 - 55,946,251 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	55,929,609 - 55,946,250 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	66,634,960 - 66,651,622 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	53,449,428 - 53,466,072 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	53,454,423 - 53,470,317 (+)	NCBI
Celera	19	50,401,641 - 50,418,280 (+)	NCBI		Celera
Cytogenetic Map	19	q12	NCBI

Cpne7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955541	3,159,818 - 3,170,428 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955541	3,159,485 - 3,170,304 (+)	NCBI	ChiLan1.0	ChiLan1.0

CPNE7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	99,359,606 - 99,381,701 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	105,276,736 - 105,298,863 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	70,327,952 - 70,349,898 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	89,937,091 - 89,951,891 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	89,936,172 - 89,955,115 (+)	Ensembl	panpan1.1		panPan2

CPNE7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	63,951,547 - 63,978,389 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	63,951,549 - 63,978,601 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	63,964,401 - 63,990,428 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	64,179,595 - 64,205,647 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	64,179,600 - 64,205,968 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	64,199,565 - 64,225,563 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	64,037,029 - 64,063,036 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	64,443,812 - 64,469,864 (-)	NCBI		UU_Cfam_GSD_1.0

Cpne7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	24,659,779 - 24,673,456 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936641	413,759 - 426,507 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936641	413,331 - 426,514 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CPNE7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	6	393,756 - 410,781 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

CPNE7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	74,937,985 - 74,953,406 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666047	557,511 - 572,149 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in Cpne7
711 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	840
Count of miRNA genes:	408
Interacting mature miRNAs:	462
Transcripts:	ENSMUST00000037900, ENSMUST00000123191, ENSMUST00000127431, ENSMUST00000131659, ENSMUST00000134235
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357494	Obsty2_m	obesity 2 (mouse)			Not determined		8	96245241	129745061	Mouse
4141435	Fbtq3_m	femoral bone trait QTL 3 (mouse)			Not determined		8	100965309	130127694	Mouse
12904960	Gmmq6_m	gastrocnemius muscle mass QTL 6 (mouse)					8	111481497	130127694	Mouse
11252141	Fdr2_m	fat response to dietary restriction 2 (mouse)					8	98390634	130127694	Mouse
1302105	Im1_m	Immunoregulatory 1 (mouse)			Not determined		8	99828531	130127694	Mouse
12880431	Fgf23lq2_m	FGF23 serum level QTL 2 (mouse)					8	97626632	130127694	Mouse
1301080	Sluc9_m	susceptibility to lung cancer 9 (mouse)			Not determined		8	99828531	130127694	Mouse
10412274	Leci1_m	leukocyte endothelial cell interactions 1 (mouse)			Not determined		8	110415083	130127694	Mouse
26884375	Skwq2_m	skull length QTL 2, 5 week (mouse)					8	120726739	130027694	Mouse
12904938	Edlmmq7_m	extensor digitorum longus muscle mass QTL 7 (mouse)					8	111481497	130127694	Mouse
10412273	Fcd1_m	functional capillary density 1 (mouse)			Not determined		8	110415083	130127694	Mouse
27226796	Scvln16_m	sacral vertebrae length 2, 16 week (mouse)					8	89726628	130027694	Mouse
14746994	Manh65_m	mandible shape 65 (mouse)					8	106489629	130127694	Mouse
27095912	Pglq14_m	pelvic girdle length QTL 14, 16 week (mouse)					8	74126628	126826739	Mouse
4141546	Mrdq3_m	modifier of retinal degeneration QTL 3 (mouse)			Not determined			114439420	126055880	Mouse
1301316	Dntcs1_m	dental caries susceptibility 1 (mouse)			Not determined		8	103443553	127781786	Mouse
1357708	Orq1_m	ovulation rate QTL 1 (mouse)			Not determined		8	71740461	124622354	Mouse
4142023	W3q5_m	weight 3 weeks QTL 5 (mouse)			Not determined			71740461	124622354	Mouse
1301481	Lith11_m	lithogenic gene 11 (mouse)			Not determined		8	98563635	130127694	Mouse
11532692	Sluc38a_m	susceptibility to lung cancer 38a (mouse)					8	105033977	130127694	Mouse
11532691	Sluc38_m	susceptibility to lung cancer 38 (mouse)					8	105033977	130127694	Mouse

Markers in Region

AW047065

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	8	123,134,948 - 123,135,084	UniSTS	GRCm38
MGSCv37	8	125,658,848 - 125,658,984	UniSTS	GRCm37
Celera	8	127,372,507 - 127,372,643	UniSTS
Cytogenetic Map	8	E1	UniSTS
Whitehead/MRC_RH	8	1428.09	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_170684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006530549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001778387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_387726	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC121819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AI550750	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK032541	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK049823	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK162900	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AU079878	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AW047065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC119328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC137595	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE864888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BF458951	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BM946575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000037900 ⟹ ENSMUSP00000042159

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	123,844,117 - 123,861,921 (+)	Ensembl
GRCm38.p6 Ensembl	8	123,117,378 - 123,135,182 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000123191

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	123,853,256 - 123,854,112 (+)	Ensembl
GRCm38.p6 Ensembl	8	123,126,517 - 123,127,373 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000127431

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	123,855,362 - 123,858,631 (+)	Ensembl
GRCm38.p6 Ensembl	8	123,128,623 - 123,131,892 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000131659

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	123,844,186 - 123,861,921 (+)	Ensembl
GRCm38.p6 Ensembl	8	123,117,447 - 123,135,182 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000134235

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	123,844,113 - 123,861,919 (+)	Ensembl
GRCm38.p6 Ensembl	8	123,117,374 - 123,135,180 (+)	Ensembl

RefSeq Acc Id:

NM_170684 ⟹ NP_733785

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	123,844,113 - 123,861,924 (+)	NCBI
GRCm38	8	123,117,374 - 123,135,185 (+)	NCBI
MGSCv37	8	125,641,274 - 125,659,085 (+)	RGD
Celera	8	127,354,880 - 127,372,744 (+)	RGD
cM Map	8		ENTREZGENE

Sequence:

show sequence

GCTCTGTGGCGGCCGCCCGAGACACGTGTGCCCGCGCCCGGCGGGCGTGCGGGGAAGCGCGGCC
ACGCCTGGTCCGGCCACCATTTCTCCGGCGCCCACCGGTTCGAGTGCGGAGCCTGAAGCATGAG
CGGCGACTCGGAGCGCGCGGTGGCCCCGGGGGTGGTGCCTGCACCCTGCGCCTCGAAGGTGGAG
CTGCGGCTGAGCTGCCGGCACCTGCTGGACCGGGACCCATTGACCAAGTCCGACCCCAGCGTGG
TGCTGCTGCAGCAGGCACAGGGCCAGTGGCTACAGGTGGACAGAACAGAGGTGGTGAAGAGCAG
CCTGCATCCTGTGTTCTCCAAGGTCTTCACTGTCGACTACTACTTCGAGGGGGTGCAGAAGCTA
CGGTTTGAGGTGTATGACACCCACGGGCCTAGTGGGCTGACTTGCCAGGATGATGACTTCCTAG
GGGGCATGGAGTGTACCCTGGGTCAAATTGTGGCCCAGAAGAAGATGACACGGCCATTGCTGTT
GCGATTCGGCAGGAATGCTGGCAAGTCCACCATCACGGTGATAGCAGAGGACATCTCTGGGAAC
AACGGCTATGTGGAGCTCTCCTTCCAGGCCCGGAAACTGGATGACAAGGACCTCTTCAGCAAGT
CGGACCCCTTCCTAGAGCTGTATCGGGTTAATGACGACGGGAGTGAGCAGCTCGTGTACAGGAC
AGAGGTAGTGAAGAACAATCTTAACCCAGTGTGGGAACCCTTCAAGGTGTCCCTGAATTCACTC
TGCAGCTGCGAGGAGACACGGCCTCTGAAGTGCCTGGTCTGGGACTATGACTCCCGAGGAAAGC
ATGACTTCATTGGCGACTTCACCACCACGTTCGCAGAGATGCAGAAGGCCTTTGAGGAGGAGCA
GCAGGCCCAGTGGGACTGTGTGAATGCCAAGTACAAACAGAAGAAGCGCAATTACAAGAATTCC
GGGGTGGTGATCCTGGCAGACCTGAAGCTCCACAGGGTCCACTCCTTCCTGGATTACATCATGG
GTGGCTGCCAGATCCACTGTACGGTAGCCATCGACTTCACAGCCTCCAACGGTGACCCGAGGAA
CAGCTGCTCCCTCCACCACATCAACCCTTACCAGCCCAACGAGTACCTGAGGGCATTGGTGGCA
GTGGGCGAGGTCTGCCAGGATTATGACAGTGACAAGCGGTTTTCTGCTCTGGGATTTGGAGCCC
GGATCCCTCCCAAGTATGAGGTGTCCCACGACTTTGCCATCAATTTCAACCCTGAGGACGATGA
GTGTGAAGGAATCCAGGGCGTGGTGGAGGCCTACCAGAACTGCCTGCCGAAGGTTCAGCTCTAC
GGCCCCACCAACGTGGCACCCATCATCTCTAAGGTGGCCCGCATGGCAGCGGCTGAGGAGAGCA
CAGGAGAGGCTTCTCAATATTACATACTGCTGATCCTCACGGACGGTGTGGTGACGGATATGTC
GGACACTCGAGAGGCCATTGTGCGTGCCTCCCACCTGCCCATGTCTGTCATCATTGTTGGGGTG
GGCAACGCTGACTTCACAGATATGCAAATCTTAGACGGGGATGATGGAGTCCTGCGTTCCCCAC
GGGGCGAGCCTGCACTCCGGGACATCGTTCAGTTTGTGCCCTTCCGTGAGCTAAAGAACGCATC
CCCCGCAGCACTGGCCAAGTGTGTGTTGGCCGAGGTGCCAAAGCAGGTGGTTGAATACTACAGC
CACAAGGAGCTGCCTCCTCGAAGCCTTGGCGCCCAGACTGGAGAGGCTGCTGCCAGCTCAGCGC
CATGAGGATGTCAGGGGAGGGAGCAGTACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCAGA
AATCCTCAGAAACTGATCACCCAGCCCAGGCCTCCCAGCCCTGCTCCTGTGTTCTGCTGGCCTG
CGTCAGTGGCCTGGTCCCCAACATGAAGAGATCTAGGCCTTGTGGCTTGACAGAAATTAGCAGC
TCCCCCAGCTCTGGGCCTCCCTGCACCCAACAGGCAAGGAGCAGGGTGTTCTGAAAGAAATGGG
GCTGCAAAGATGCTCTCCCCTCTTGCTTGAGGTCACTCTCCTGTCAATCATAGCACCACTTCAG
AAGAGCCCTCAAGCCCAGCTTGGCCCAGAGAGATGGGTGGGATCGCTCCTGTTATAATCCTGGC
AGCTCAGCTATGGAAAGGGTGGTGAAGGGGTGGTCGACCTGGACAATCTTGCCATTTGATCGTG
TGGAGAGAGGAAGTACCCCAAGCCTTGAGGACACCCATATCTGGGCACTTTGTCCCCATAGGTT
TCTCTGTCCTGTCTGGTGCCTCTCCAACCTGTACCCACACCTGGAGCCTGCGGGGCCTGGGAGA
CAGCTTAGGGTGTAATAAAGTATCCCTCATTCTCACAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006530549 ⟹ XP_006530612

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	123,846,545 - 123,861,924 (+)	NCBI
GRCm38	8	123,119,806 - 123,135,185 (+)	NCBI

Sequence:

show sequence

GTTCCCCATCGCCTTGGAAGGATTGTGGCCCAGAAGAAGATGACACGGCCATTGCTGTTGCGAT
TCGGCAGGAATGCTGGCAAGTCCACCATCACGGTGATAGCAGAGGACATCTCTGGGAACAACGG
CTATGTGGAGCTCTCCTTCCAGGCCCGGAAACTGGATGACAAGGACCTCTTCAGCAAGTCGGAC
CCCTTCCTAGAGCTGTATCGGGTTAATGACGACGGGAGTGAGCAGCTCGTGTACAGGACAGAGG
TAGTGAAGAACAATCTTAACCCAGTGTGGGAACCCTTCAAGGTGTCCCTGAATTCACTCTGCAG
CTGCGAGGAGACACGGCCTCTGAAGTGCCTGGTCTGGGACTATGACTCCCGAGGAAAGCATGAC
TTCATTGGCGACTTCACCACCACGTTCGCAGAGATGCAGAAGGCCTTTGAGGAGGAGCAGCAGG
CCCAGTGGGACTGTGTGAATGCCAAGTACAAACAGAAGAAGCGCAATTACAAGAATTCCGGGGT
GGTGATCCTGGCAGACCTGAAGCTCCACAGGGTCCACTCCTTCCTGGATTACATCATGGGTGGC
TGCCAGATCCACTGTACGGTAGCCATCGACTTCACAGCCTCCAACGGTGACCCGAGGAACAGCT
GCTCCCTCCACCACATCAACCCTTACCAGCCCAACGAGTACCTGAGGGCATTGGTGGCAGTGGG
CGAGGTCTGCCAGGATTATGACAGTGACAAGCGGTTTTCTGCTCTGGGATTTGGAGCCCGGATC
CCTCCCAAGTATGAGGTGTCCCACGACTTTGCCATCAATTTCAACCCTGAGGACGATGAGTGTG
AAGGAATCCAGGGCGTGGTGGAGGCCTACCAGAACTGCCTGCCGAAGGTTCAGCTCTACGGCCC
CACCAACGTGGCACCCATCATCTCTAAGGTGGCCCGCATGGCAGCGGCTGAGGAGAGCACAGGA
GAGGCTTCTCAATATTACATACTGCTGATCCTCACGGACGGTGTGGTGACGGATATGTCGGACA
CTCGAGAGGCCATTGTGCGTGCCTCCCACCTGCCCATGTCTGTCATCATTGTTGGGGTGGGCAA
CGCTGACTTCACAGATATGCAAATCTTAGACGGGGATGATGGAGTCCTGCGTTCCCCACGGGGC
GAGCCTGCACTCCGGGACATCGTTCAGTTTGTGCCCTTCCGTGAGCTAAAGAACGCATCCCCCG
CAGCACTGGCCAAGTGTGTGTTGGCCGAGGTGCCAAAGCAGGTGGTTGAATACTACAGCCACAA
GGAGCTGCCTCCTCGAAGCCTTGGCGCCCAGACTGGAGAGGCTGCTGCCAGCTCAGCGCCATGA
GGATGTCAGGGGAGGGAGCAGTACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCAGAAATCC
TCAGAAACTGATCACCCAGCCCAGGCCTCCCAGCCCTGCTCCTGTGTTCTGCTGGCCTGCGTCA
GTGGCCTGGTCCCCAACATGAAGAGATCTAGGCCTTGTGGCTTGACAGAAATTAGCAGCTCCCC
CAGCTCTGGGCCTCCCTGCACCCAACAGGCAAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTGC
AAAGATGCTCTCCCCTCTTGCTTGAGGTCACTCTCCTGTCAATCATAGCACCACTTCAGAAGAG
CCCTCAAGCCCAGCTTGGCCCAGAGAGATGGGTGGGATCGCTCCTGTTATAATCCTGGCAGCTC
AGCTATGGAAAGGGTGGTGAAGGGGTGGTCGACCTGGACAATCTTGCCATTTGATCGTGTGGAG
AGAGGAAGTACCCCAAGCCTTGAGGACACCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCT
GTCCTGTCTGGTGCCTCTCCAACCTGTACCCACACCTGGAGCCTGCGGGGCCTGGGAGACAGCT
TAGGGTGTAATAAAGTATCCCTCATTCTCACA

hide sequence

RefSeq Acc Id:

XR_001778387

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	123,844,054 - 123,861,924 (+)	NCBI
GRCm38	8	123,117,313 - 123,135,185 (+)	NCBI

Sequence:

show sequence

CCCGCCCCTTCGCGGTCCCCTCCATCCCTTCCCCGCTGCATCGCCGCCCTACAGCCCCCGCTCT
GTGGCGGCCGCCCGAGACACGTGTGCCCGCGCCCGGCGGGCGTGCGGGGAAGCGCGGCCACGCC
TGGTCCGGCCACCATTTCTCCGGCGCCCACCGGTTCGAGTGCGGAGCCTGAAGCATGAGCGGCG
ACTCGGAGCGCGCGGTGGCCCCGGGGGTGGTGCCTGCACCCTGCGCCTCGAAGGTGGAGCTGCG
GCTGAGCTGCCGGCACCTGCTGGACCGGGACCCATTGACCAAGTCCGACCCCAGCGTGGTGCTG
CTGCAGCAGGCACAGGGCCAGTGGCTACAGGTGGACAGAACAGAGGTGGTGAAGAGCAGCCTGC
ATCCTGTGTTCTCCAAGGTCTTCACTGTCGACTACTACTTCGAGGGGGTGCAGAAGCTACGGTT
TGAGGTGTATGACACCCACGGGCCTAGTGGGCTGACTTGCCAGGATGATGACTTCCTAGGGGGC
ATGGAGTGTACCCTGGGTCAAATTGTGGCCCAGAAGAAGATGACACGGCCATTGCTGTTGCGAT
TCGGCAGGAATGCTGGCAAGTCCACCATCACGGTGATAGCAGAGGACATCTCTGGGAACAACGG
CTATGTGGAGCTCTCCTTCCAGGCCCGGAAACTGGATGACAAGGACCTCTTCAGCAAGTCGGAC
CCCTTCCTAGAGCTGTATCGGGTTAATGACGACGGGAGTGAGCAGCTCGTGTACAGGACAGAGG
TAGTGAAGAACAATCTTAACCCAGTGTGGGAACCCTTCAAGGTGTCCCTGAATTCACTCTGCAG
CTGCGAGGAGACACGGCCTCTGAAGTGCCTGGTCTGGGACTATGACTCCCGAGGAAAGCATGAC
TTCATTGGCGACTTCACCACCACGTTCGCAGAGATGCAGAAGGCCTTTGAGGAGGAGCAGCAGG
CCCAGTGGGACTGTGTGAATGCCAAGTACAAACAGAAGAAGCGCAATTACAAGAATTCCGGGGT
GGTGATCCTGGCAGACCTGAAGGGTCCACTCCTTCCTGGATTACATCATGGGTGGCTGCCAGAT
CCACTGTACGGTAGCCATCGACTTCACAGCCTCCAACGGTGACCCGAGGAACAGCTGCTCCCTC
CACCACATCAACCCTTACCAGCCCAACGAGTACCTGAGGGCATTGGTGGCAGTGGGCGAGGTCT
GCCAGGATTATGACAGTGACAAGCGGTTTTCTGCTCTGGGATTTGGAGCCCGGATCCCTCCCAA
GTATGAGGTGTCCCACGACTTTGCCATCAATTTCAACCCTGAGGACGATGAGTGTGAAGGAATC
CAGGGCGTGGTGGAGGCCTACCAGAACTGCCTGCCGAAGGTTCAGCTCTACGGCCCCACCAACG
TGGCACCCATCATCTCTAAGGTGGCCCGCATGGCAGCGGCTGAGGAGAGCACAGGAGAGGCTTC
TCAATATTACATACTGCTGATCCTCACGGACGGTGTGGTGACGGATATGTCGGACACTCGAGAG
GCCATTGTGCGTGCCTCCCACCTGCCCATGTCTGTCATCATTGTTGGGGTGGGCAACGCTGACT
TCACAGATATGCAAATCTTAGACGGGGATGATGGAGTCCTGCGTTCCCCACGGGGCGAGCCTGC
ACTCCGGGACATCGTTCAGTTTGTGCCCTTCCGTGAGCTAAAGAACGCATCCCCCGCAGCACTG
GCCAAGTGTGTGTTGGCCGAGGTGCCAAAGCAGGTGGTTGAATACTACAGCCACAAGGAGCTGC
CTCCTCGAAGCCTTGGCGCCCAGACTGGAGAGGCTGCTGCCAGCTCAGCGCCATGAGGATGTCA
GGGGAGGGAGCAGTACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCAGAAATCCTCAGAAAC
TGATCACCCAGCCCAGGCCTCCCAGCCCTGCTCCTGTGTTCTGCTGGCCTGCGTCAGTGGCCTG
GTCCCCAACATGAAGAGATCTAGGCCTTGTGGCTTGACAGAAATTAGCAGCTCCCCCAGCTCTG
GGCCTCCCTGCACCCAACAGGCAAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTGCAAAGATGC
TCTCCCCTCTTGCTTGAGGTCACTCTCCTGTCAATCATAGCACCACTTCAGAAGAGCCCTCAAG
CCCAGCTTGGCCCAGAGAGATGGGTGGGATCGCTCCTGTTATAATCCTGGCAGCTCAGCTATGG
AAAGGGTGGTGAAGGGGTGGTCGACCTGGACAATCTTGCCATTTGATCGTGTGGAGAGAGGAAG
TACCCCAAGCCTTGAGGACACCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTC
TGGTGCCTCTCCAACCTGTACCCACACCTGGAGCCTGCGGGGCCTGGGAGACAGCTTAGGGTGT
AATAAAGTATCCCTCATTCTCACA

hide sequence

RefSeq Acc Id:

XR_387726

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	123,844,057 - 123,861,924 (+)	NCBI
GRCm38	8	123,117,316 - 123,135,185 (+)	NCBI

Sequence:

show sequence

GCCCCTTCGCGGTCCCCTCCATCCCTTCCCCGCTGCATCGCCGCCCTACAGCCCCCGCTCTGTG
GCGGCCGCCCGAGACACGTGTGCCCGCGCCCGGCGGGCGTGCGGGGAAGCGCGGCCACGCCTGG
TCCGGCCACCATTTCTCCGGCGCCCACCGGTTCGAGTGCGGAGCCTGAAGCATGAGCGGCGACT
CGGAGCGCGCGGTGGCCCCGGGGGTGGTGCCTGCACCCTGCGCCTCGAAGGTGGAGCTGCGGCT
GAGCTGCCGGCACCTGCTGGACCGGGACCCATTGACCAAGTCCGACCCCAGCGTGGTGCTGCTG
CAGCAGGCACAGGGCCAGTGGCTACAGGTGGACAGAACAGAGGTGGTGAAGAGCAGCCTGCATC
CTGTGTTCTCCAAGGTCTTCACTGTCGACTACTACTTCGAGGGGGTGCAGAAGCTACGGTTTGA
GGTGTATGACACCCACGGGCCTAGTGGGCTGACTTGCCAGGATGATGACTTCCTAGGGGGCATG
GAGTGTACCCTGGGTCAAATTGTGGCCCAGAAGAAGATGACACGGCCATTGCTGTTGCGATTCG
GCAGGAATGCTGGCAAGTCCACCATCACGGTGATAGCAGAGGACATCTCTGGGAACAACGGCTA
TGTGGAGCTCTCCTTCCAGGCCCGGAAACTGGATGACAAGGACCTCTTCAGCAAGTCGGACCCC
TTCCTAGAGCTGTATCGGGTTAATGACGACGGGAGTGAGCAGCTCGTGTACAGGACAGAGGTAG
TGAAGAACAATCTTAACCCAGTGTGGGAACCCTTCAAGGTGTCCCTGAATTCACTCTGCAGCTG
CGAGGAGACACGGCCTCTGAAGTGCCTGGTCTGGGACTATGACTCCCGAGGAAAGCATGACTTC
ATTGGCGACTTCACCACCACGTTCGCAGAGATGCAGAAGGCCTTTGAGGAGGAGCAGCAGGCCC
AGTGGGACTGTGTGAATGCCAAGTACAAACAGAAGAAGCGCAATTACAAGAATTCCGGGGTGGT
GATCCTGGCAGACCTGAAGCTCCACAGGGTCCACTCCTTCCTGGATTACATCATGGGTGGCTGC
CAGATCCACTGTACGGTAGCCATCGACTTCACAGCCTCCAACGGTGACCCGAGGAACAGCTGCT
CCCTCCACCACATCAACCCTTACCAGCCCAACGAGTACCTGAGGGCATTGGTGGCAGTGGGCGA
GGTCTGCCAGGATTATGACAGTGACAAGCGGTTTTCTGCTCTGGGATTTGGAGCCCGGATCCCT
CCCAAGTATGAGGTGTCCCACGACTTTGCCATCAATTTCAACCCTGAGGACGATGAGTGTGAAG
GAATCCAGGGCGTGGTGGAGGCCTACCAGAACTGCCTGCCGAAGGTTCAGCTCTACGGCCCCAC
CAACGTGGCACCCATCATCTCTAAGGTGGCCCGCATGGCAGCGGCTGAGGAGAGCACAGGAGAG
GCTTCTGTAGCAATATTACATACTGCTGATCCTCACGGACGGTGTGGTGACGGATATGTCGGAC
ACTCGAGAGGCCATTGTGCGTGCCTCCCACCTGCCCATGTCTGTCATCATTGTTGGGGTGGGCA
ACGCTGACTTCACAGATATGCAAATCTTAGACGGGGATGATGGAGTCCTGCGTTCCCCACGGGG
CGAGCCTGCACTCCGGGACATCGTTCAGTTTGTGCCCTTCCGTGAGCTAAAGAACGCATCCCCC
GCAGCACTGGCCAAGTGTGTGTTGGCCGAGGTGCCAAAGCAGGTGGTTGAATACTACAGCCACA
AGGAGCTGCCTCCTCGAAGCCTTGGCGCCCAGACTGGAGAGGCTGCTGCCAGCTCAGCGCCATG
AGGATGTCAGGGGAGGGAGCAGTACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCAGAAATC
CTCAGAAACTGATCACCCAGCCCAGGCCTCCCAGCCCTGCTCCTGTGTTCTGCTGGCCTGCGTC
AGTGGCCTGGTCCCCAACATGAAGAGATCTAGGCCTTGTGGCTTGACAGAAATTAGCAGCTCCC
CCAGCTCTGGGCCTCCCTGCACCCAACAGGCAAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTG
CAAAGATGCTCTCCCCTCTTGCTTGAGGTCACTCTCCTGTCAATCATAGCACCACTTCAGAAGA
GCCCTCAAGCCCAGCTTGGCCCAGAGAGATGGGTGGGATCGCTCCTGTTATAATCCTGGCAGCT
CAGCTATGGAAAGGGTGGTGAAGGGGTGGTCGACCTGGACAATCTTGCCATTTGATCGTGTGGA
GAGAGGAAGTACCCCAAGCCTTGAGGACACCCATATCTGGGCACTTTGTCCCCATAGGTTTCTC
TGTCCTGTCTGGTGCCTCTCCAACCTGTACCCACACCTGGAGCCTGCGGGGCCTGGGAGACAGC
TTAGGGTGTAATAAAGTATCCCTCATTCTCACA

hide sequence

Protein Sequences


Protein RefSeqs	NP_733785	(Get FASTA)	NCBI Sequence Viewer
	XP_006530612	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI19329	(Get FASTA)	NCBI Sequence Viewer
	AAI37596	(Get FASTA)	NCBI Sequence Viewer
	BAC27917	(Get FASTA)	NCBI Sequence Viewer
	BAC33936	(Get FASTA)	NCBI Sequence Viewer
	EDL11710	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000042159
	ENSMUSP00000042159.9
GenBank Protein	Q0VE82	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_733785 ⟸ NM_170684

- UniProtKB:

Q0VE82 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MSGDSERAVAPGVVPAPCASKVELRLSCRHLLDRDPLTKSDPSVVLLQQAQGQWLQVDRTEVVK
SSLHPVFSKVFTVDYYFEGVQKLRFEVYDTHGPSGLTCQDDDFLGGMECTLGQIVAQKKMTRPL
LLRFGRNAGKSTITVIAEDISGNNGYVELSFQARKLDDKDLFSKSDPFLELYRVNDDGSEQLVY
RTEVVKNNLNPVWEPFKVSLNSLCSCEETRPLKCLVWDYDSRGKHDFIGDFTTTFAEMQKAFEE
EQQAQWDCVNAKYKQKKRNYKNSGVVILADLKLHRVHSFLDYIMGGCQIHCTVAIDFTASNGDP
RNSCSLHHINPYQPNEYLRALVAVGEVCQDYDSDKRFSALGFGARIPPKYEVSHDFAINFNPED
DECEGIQGVVEAYQNCLPKVQLYGPTNVAPIISKVARMAAAEESTGEASQYYILLILTDGVVTD
MSDTREAIVRASHLPMSVIIVGVGNADFTDMQILDGDDGVLRSPRGEPALRDIVQFVPFRELKN
ASPAALAKCVLAEVPKQVVEYYSHKELPPRSLGAQTGEAAASSAP

hide sequence

RefSeq Acc Id:

XP_006530612 ⟸ XM_006530549

- Peptide Label:

isoform X1

- Sequence:

show sequence

MTRPLLLRFGRNAGKSTITVIAEDISGNNGYVELSFQARKLDDKDLFSKSDPFLELYRVNDDGS
EQLVYRTEVVKNNLNPVWEPFKVSLNSLCSCEETRPLKCLVWDYDSRGKHDFIGDFTTTFAEMQ
KAFEEEQQAQWDCVNAKYKQKKRNYKNSGVVILADLKLHRVHSFLDYIMGGCQIHCTVAIDFTA
SNGDPRNSCSLHHINPYQPNEYLRALVAVGEVCQDYDSDKRFSALGFGARIPPKYEVSHDFAIN
FNPEDDECEGIQGVVEAYQNCLPKVQLYGPTNVAPIISKVARMAAAEESTGEASQYYILLILTD
GVVTDMSDTREAIVRASHLPMSVIIVGVGNADFTDMQILDGDDGVLRSPRGEPALRDIVQFVPF
RELKNASPAALAKCVLAEVPKQVVEYYSHKELPPRSLGAQTGEAAASSAP

hide sequence

Ensembl Acc Id:

ENSMUSP00000042159 ⟸ ENSMUST00000037900

Protein Domains

C2 Copine C-terminal VWFA

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q0VE82-F1-model_v2	AlphaFold	Q0VE82	1-557	view protein structure

Promoters

RGD ID:

8668547

Promoter ID:

EPDNEW_M12305

Type:

initiation region

Name:

Cpne7_1

Description:

Mus musculus copine VII , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	8	123,117,453 - 123,117,513	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2142747	AgrOrtholog
Ensembl Genes	ENSMUSG00000034796	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000037900	ENTREZGENE
	ENSMUST00000037900.9	UniProtKB/Swiss-Prot
Gene3D-CATH	2.60.40.150	UniProtKB/Swiss-Prot
	3.40.50.410	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	C2_dom	UniProtKB/Swiss-Prot
	C2_domain_sf	UniProtKB/Swiss-Prot
	C2B_Copine	UniProtKB/Swiss-Prot
	Copine	UniProtKB/Swiss-Prot
	Copine	UniProtKB/Swiss-Prot
	Copine	UniProtKB/TrEMBL
	Copine	UniProtKB/TrEMBL
	VWF_A	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	vWFA_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:102278	UniProtKB/Swiss-Prot
MGD	MGI:2142747	ENTREZGENE
NCBI Gene	102278	ENTREZGENE
PANTHER	COPINE-7	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR10857	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Copine	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PF00168	UniProtKB/Swiss-Prot
PhenoGen	Cpne7	PhenoGen
PROSITE	PS50004	UniProtKB/Swiss-Prot
	VWFA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	SM00239	UniProtKB/Swiss-Prot
	VWA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF49562	UniProtKB/Swiss-Prot
	SSF53300	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	CPNE7_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE
	Q8BIJ1_MOUSE	UniProtKB/TrEMBL
	Q8C019_MOUSE	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype