Olig2 (oligodendrocyte transcription factor 2)

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Gene: Olig2 (oligodendrocyte transcription factor 2) Mus musculus

Analyze

Symbol:

Olig2

Name:

oligodendrocyte transcription factor 2

RGD ID:

1316089

MGI Page

MGI

Description:

Enables DNA-binding transcription factor activity, RNA polymerase II-specific; HMG box domain binding activity; and identical protein binding activity. Acts upstream of or within several processes, including negative regulation of transcription by RNA polymerase II; nervous system development; and positive regulation of oligodendrocyte differentiation. Located in cytoplasm and nucleus. Is expressed in several structures, including central nervous system; epidermis; future brain; genitourinary system; and sensory organ. Orthologous to human OLIG2 (oligodendrocyte transcription factor 2).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

AI604895; Bhlhb; Bhlhb1; bHLHe1; bHLHe19; Olg; Olg-2; Oligo2; RK1; RK17

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	91,016,745 - 91,025,567 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	91,022,345 - 91,025,565 (+)	Ensembl		GRCm39 Ensembl
GRCm38	16	91,225,550 - 91,228,677 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	91,225,457 - 91,228,677 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	91,225,795 - 91,228,922 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	91,114,409 - 91,117,536 (+)	NCBI		MGSCv36	mm8
Celera	16	92,308,914 - 92,312,041 (+)	NCBI		Celera
Cytogenetic Map	16	C3.3	NCBI
cM Map	16	52.6	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amyotrophic lateral sclerosis type 1 (ISO)

autosomal dominant intellectual developmental disorder 7 (ISO)

Experimental Autoimmune Encephalomyelitis (IEP,ISO)

Familial Platelet Disorder with Associated Myeloid Malignancy (ISO)

genetic disease (ISO)

HIV Encephalitis (ISO)

immunodeficiency 28 (ISO)

Neoplasm Metastasis (ISO)

Parkinson's disease 20 (ISO)

Spinal Cord Injuries (IMP,ISO)

status epilepticus (ISO)

toxocariasis (IEP)

ZTTK syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(S)-colchicine (ISO)

1,2-dichloroethane (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (ISO)

3,3',5,5'-tetrabromobisphenol A (EXP)

3,3',5-triiodo-L-thyronine (ISO)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (EXP,ISO)

5-aza-2'-deoxycytidine (ISO)

5-fluorouracil (EXP)

acetic acid (EXP)

acrylamide (EXP,ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (EXP)

arachidonyl-2'-chloroethylamide (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

bromochloroacetic acid (EXP)

cadmium dichloride (ISO)

carbamazepine (ISO)

carbofuran (ISO)

casticin (ISO)

CHIR 99021 (ISO)

choline (EXP)

cisplatin (ISO)

Cuprizon (EXP,ISO)

decabromodiphenyl ether (ISO)

diarsenic trioxide (ISO)

disodium selenite (EXP)

fenvalerate (ISO)

fluoxetine (EXP)

folic acid (EXP)

fumonisin B1 (ISO)

glyphosate (ISO)

hydroxyurea (ISO)

L-ascorbic acid (ISO)

L-ascorbic acid 2-phosphate (ISO)

L-methionine (EXP)

lead diacetate (ISO)

lead(0) (ISO)

linagliptin (EXP)

methylmercury chloride (EXP,ISO)

ochratoxin A (ISO)

ozone (ISO)

paracetamol (ISO)

Ptaquiloside (EXP)

resveratrol (ISO)

rotenone (ISO)

SB 431542 (ISO)

sulfadiazine (ISO)

thalidomide (EXP)

trichloroethene (ISO)

trichostatin A (ISO)

valproic acid (EXP,ISO)

vorinostat (ISO)

XAV939 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axon development (IBA)

myelination (IMP)

negative regulation of neuron differentiation (IDA)

negative regulation of transcription by RNA polymerase II (IDA)

nervous system development (IDA)

neuron differentiation (IDA)

neuron fate commitment (IMP)

oligodendrocyte cell fate specification (IEA)

oligodendrocyte differentiation (IGI,IMP,ISO)

positive regulation of oligodendrocyte differentiation (IGI)

positive regulation of transcription by RNA polymerase II (IBA)

regulation of DNA-templated transcription (IDA,ISS)

sensory organ development (IBA)

spinal cord motor neuron differentiation (IMP)

spinal cord oligodendrocyte cell differentiation (IGI)

spinal cord oligodendrocyte cell fate specification (IDA)

thalamus development (IMP)

Cellular Component

cytoplasm (IDA)

nucleus (IBA,IDA)

transcription regulator complex (ISS)

Molecular Function

DNA binding (IEA)

DNA-binding transcription factor activity (IDA,ISS)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA,IDA)

E-box binding (IBA)

HMG box domain binding (IPI)

identical protein binding (IPI)

protein binding (IPI)

protein dimerization activity (IEA)

sequence-specific double-stranded DNA binding (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal brain development (IAGP)

abnormal brain morphology (IAGP)

abnormal brainstem morphology (IAGP)

abnormal breathing pattern (IAGP)

abnormal cell differentiation (IAGP)

abnormal CNS synaptic transmission (IAGP)

abnormal corpus callosum morphology (IAGP)

abnormal dendrite morphology (IAGP)

abnormal dorsal root ganglion morphology (IAGP)

abnormal excitatory postsynaptic potential (IAGP)

abnormal glial cell physiology (IAGP)

abnormal hindbrain development (IAGP)

abnormal miniature endplate potential (IAGP)

abnormal muscle morphology (IAGP)

abnormal myelination (IAGP)

abnormal nervous system development (IAGP)

abnormal neuromuscular synapse morphology (IAGP)

abnormal neuronal migration (IAGP)

abnormal oligodendrocyte morphology (IAGP)

abnormal oligodendrocyte physiology (IAGP)

abnormal optic nerve morphology (IAGP)

abnormal PNS synaptic transmission (IAGP)

abnormal posture (IAGP)

abnormal proprioceptive neuron morphology (IAGP)

abnormal reflex (IAGP)

abnormal sensory neuron innervation pattern (IAGP)

abnormal sensory neuron morphology (IAGP)

abnormal spinal cord lateral motor column morphology (IAGP)

abnormal spinal cord medial motor column morphology (IAGP)

abnormal spinal cord morphology (IAGP)

abnormal spinal cord motor column morphology (IAGP)

abnormal spinal cord ventral horn morphology (IAGP)

abnormal synaptic bouton morphology (IAGP)

abnormal synaptic transmission (IAGP)

abnormal ventral interneuron 1 morphology (IAGP)

abnormal ventral interneuron 2 morphology (IAGP)

absent oligodendrocytes (IAGP)

aphagia (IAGP)

ataxia (IAGP)

decreased body weight (IAGP)

decreased epididymal fat pad weight (IAGP)

decreased fetal size (IAGP)

decreased grip strength (IAGP)

decreased motor neuron number (IAGP)

decreased oligodendrocyte number (IAGP)

decreased oligodendrocyte progenitor number (IAGP)

decreased skeletal muscle fiber number (IAGP)

decreased survivor rate (IAGP)

dysmyelination (IAGP)

embryonic lethality during organogenesis, complete penetrance (IAGP)

enlarged lateral ventricles (IAGP)

hypotonia (IAGP)

impaired coordination (IAGP)

impaired spatial learning (IAGP)

increased brain tumor incidence (IAGP)

increased brain weight (IAGP)

increased glioma incidence (IAGP)

increased medulloblastoma incidence (IAGP)

increased oligodendrocyte number (IAGP)

increased skeletal muscle fiber size (IAGP)

kyphosis (IAGP)

lethality throughout fetal growth and development, complete penetrance (IAGP)

lethality throughout fetal growth and development, incomplete penetrance (IAGP)

limb grasping (IAGP)

motor neuron degeneration (IAGP)

muscle spasm (IAGP)

muscle weakness (IAGP)

muscular atrophy (IAGP)

neonatal lethality, complete penetrance (IAGP)

no spontaneous movement (IAGP)

perinatal lethality, complete penetrance (IAGP)

postnatal lethality, complete penetrance (IAGP)

postnatal lethality, incomplete penetrance (IAGP)

premature death (IAGP)

preweaning lethality, complete penetrance (IAGP)

preweaning lethality, incomplete penetrance (IAGP)

seizures (IAGP)

skeletal muscle fiber degeneration (IAGP)

tremors (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	A gene expression map of human chromosome 21 orthologues in the mouse.	Gitton Y, etal., Nature 2002 Dec 5;420(6915):586-90.
2.	Neurotoxocarosis alters myelin protein gene transcription and expression.	Heuer L, etal., Parasitol Res. 2015 Jun;114(6):2175-86. doi: 10.1007/s00436-015-4407-1. Epub 2015 Mar 17.
3.	Effects of Olig2-overexpressing neural stem cells and myelin basic protein-activated T cells on recovery from spinal cord injury.	Hu JG, etal., Neurotherapeutics. 2012 Apr;9(2):422-45. doi: 10.1007/s13311-011-0090-9.
4.	Gene Expression Profiling of Breast Cancer Brain Metastasis.	Lee JY, etal., Sci Rep. 2016 Jun 24;6:28623. doi: 10.1038/srep28623.
5.	Common developmental requirement for Olig function indicates a motor neuron/oligodendrocyte connection.	Lu QR, etal., Cell 2002 Apr 5;109(1):75-86.
6.	Demyelination contributes to depression comorbidity in a rat model of chronic epilepsy via dysregulation of Olig2/LINGO-1 and disturbance of calcium homeostasis.	Ma T, etal., Exp Neurol. 2019 Nov;321:113034. doi: 10.1016/j.expneurol.2019.113034. Epub 2019 Aug 12.
7.	Patterns of gene dysregulation in the frontal cortex of patients with HIV encephalitis.	Masliah E, etal., J Neuroimmunol. 2004 Dec;157(1-2):163-75. doi: 10.1016/j.jneuroim.2004.08.026.
8.	MGDs mouse GO annotations	MGD data from the GO Consortium
9.	MGD IEA	MGD IEA
10.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
11.	Therapeutic Potential of Pien Tze Huang on Experimental Autoimmune Encephalomyelitis Rat.	Qiu X, etal., J Immunol Res. 2018 Feb 27;2018:2952471. doi: 10.1155/2018/2952471. eCollection 2018.
12.	Human chromosome 21 gene expression atlas in the mouse.	Reymond A, etal., Nature 2002 Dec 5;420(6915):582-6.
13.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
14.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
15.	Local injection of Lenti-Olig2 at lesion site promotes functional recovery of spinal cord injury in rats.	Tan BT, etal., CNS Neurosci Ther. 2017 Jun;23(6):475-487. doi: 10.1111/cns.12694. Epub 2017 Apr 27.
16.	[Effect of Yishen Daluo Decoction on the expression of PLP, Olig1, and Olig2 in mice with experimental autoimmune encephalomyelitis].	Zhu WH, etal., Zhongguo Zhong Xi Yi Jie He Za Zhi. 2014 May;34(5):562-5.

Additional References at PubMed

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PMID:28490013	PMID:28496133	PMID:28525381	PMID:28546087	PMID:28595615	PMID:28688895	PMID:28760862	PMID:28780049	PMID:28814342	PMID:28817564	PMID:28827394	PMID:28850031
PMID:28854700	PMID:28891097	PMID:28892064	PMID:28893945	PMID:28912684	PMID:28924206	PMID:28926609	PMID:28989170	PMID:29038301	PMID:29069594	PMID:29106906	PMID:29161318
PMID:29184203	PMID:29203794	PMID:29251594	PMID:29285798	PMID:29307712	PMID:29361054	PMID:29379870	PMID:29382710	PMID:29386106	PMID:29389974	PMID:29444423	PMID:29446202
PMID:29483282	PMID:29500351	PMID:29513653	PMID:29556025	PMID:29556912	PMID:29571613	PMID:29590634	PMID:29603384	PMID:29650591	PMID:29681511	PMID:29683222	PMID:29716957
PMID:29725084	PMID:29732603	PMID:29739868	PMID:29768404	PMID:29770538	PMID:29787563	PMID:29795232	PMID:29853630	PMID:29885287	PMID:29899142	PMID:29912395	PMID:29920279
PMID:29972793	PMID:29990475	PMID:30057274	PMID:30078577	PMID:30174314	PMID:30177510	PMID:30204081	PMID:30217225	PMID:30266827	PMID:30322923	PMID:30344048	PMID:30348983
PMID:30449657	PMID:30503207	PMID:30514900	PMID:30532139	PMID:30538199	PMID:30635555	PMID:30659230	PMID:30661984	PMID:30664625	PMID:30692224	PMID:30782847	PMID:30791390
PMID:30796806	PMID:30814516	PMID:30843579	PMID:30846445	PMID:30889310	PMID:30902550	PMID:30980466	PMID:30982771	PMID:30988524	PMID:31043608	PMID:31063129	PMID:31064784
PMID:31071314	PMID:31076274	PMID:31078684	PMID:31081019	PMID:31082736	PMID:31155482	PMID:31235634	PMID:31235635	PMID:31249377	PMID:31291587	PMID:31305241	PMID:31336385
PMID:31427287	PMID:31461644	PMID:31474569	PMID:31653848	PMID:31665628	PMID:31724774	PMID:31731293	PMID:31758234	PMID:31758330	PMID:31772009	PMID:31816056	PMID:31822965
PMID:31901304	PMID:31919899	PMID:31932351	PMID:31944180	PMID:31964774	PMID:31969356	PMID:31969659	PMID:31995756	PMID:32015540	PMID:32042174	PMID:32123192	PMID:32123907
PMID:32129762	PMID:32135084	PMID:32142668	PMID:32179479	PMID:32187534	PMID:32234482	PMID:32238932	PMID:32266943	PMID:32278722	PMID:32294450	PMID:32366272	PMID:32386572
PMID:32449185	PMID:32450295	PMID:32515730	PMID:32521266	PMID:32541003	PMID:32568216	PMID:32579270	PMID:32702291	PMID:32708917	PMID:32737167	PMID:32758357	PMID:32765228
PMID:32817053	PMID:32913108	PMID:32937136	PMID:32943498	PMID:32976762	PMID:33060130	PMID:33086038	PMID:33165593	PMID:33187539	PMID:33203872	PMID:33277484	PMID:33462220
PMID:33510480	PMID:33547135	PMID:33570491	PMID:33574458	PMID:33591268	PMID:33602870	PMID:33618751	PMID:33674582	PMID:33739968	PMID:33775695	PMID:33787491	PMID:33848959
PMID:33869166	PMID:33887203	PMID:33899734	PMID:33938018	PMID:34132778	PMID:34222248	PMID:34287339	PMID:34296073	PMID:34321999	PMID:34336815	PMID:34339499	PMID:34400844
PMID:34428430	PMID:34429415	PMID:34486668	PMID:34536353	PMID:34587162	PMID:34610310	PMID:34614421	PMID:34615523	PMID:34630045	PMID:34655526	PMID:34749773	PMID:34752747
PMID:34963132	PMID:34974536	PMID:34994686	PMID:35022234	PMID:35089129	PMID:35132995	PMID:35177643	PMID:35187673	PMID:35231638	PMID:35301318	PMID:35315772	PMID:35353806
PMID:35377797	PMID:35399523	PMID:35524725	PMID:35535852	PMID:35695185	PMID:35736214	PMID:35815610	PMID:35853870	PMID:35906071	PMID:36067211	PMID:36154712	PMID:36198499
PMID:36265906	PMID:36280666	PMID:36323680	PMID:36370145	PMID:36402907	PMID:36476860	PMID:36512397	PMID:36547371	PMID:36549270	PMID:36550293	PMID:36634201	PMID:36669111
PMID:36737666	PMID:36915679	PMID:37017184	PMID:37054704	PMID:37075114	PMID:37099424	PMID:37300483	PMID:37307456	PMID:37364986	PMID:37371026	PMID:37389991	PMID:37390294
PMID:37407594	PMID:37414952	PMID:37416774	PMID:37463107	PMID:37463454	PMID:37543947	PMID:37553426	PMID:37566909	PMID:37590144	PMID:37684687	PMID:37738575	PMID:37756583
PMID:37858465	PMID:37869988	PMID:37897724	PMID:37906993	PMID:37924811	PMID:37943875	PMID:38025769	PMID:38062045	PMID:38079449	PMID:38086370	PMID:38091994	PMID:38101413
PMID:38171360	PMID:38227267	PMID:38269113	PMID:38366596	PMID:38383496	PMID:38419656	PMID:38429579	PMID:38433925	PMID:38487272	PMID:38507412	PMID:38546197	PMID:38696583
PMID:38713624	PMID:38942786

Genomics

Comparative Map Data

Olig2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	91,016,745 - 91,025,567 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	91,022,345 - 91,025,565 (+)	Ensembl		GRCm39 Ensembl
GRCm38	16	91,225,550 - 91,228,677 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	91,225,457 - 91,228,677 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	91,225,795 - 91,228,922 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	91,114,409 - 91,117,536 (+)	NCBI		MGSCv36	mm8
Celera	16	92,308,914 - 92,312,041 (+)	NCBI		Celera
Cytogenetic Map	16	C3.3	NCBI
cM Map	16	52.6	NCBI

OLIG2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	21	33,025,935 - 33,029,185 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	21	33,025,935 - 33,029,196 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	21	34,398,243 - 34,401,493 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	21	33,320,109 - 33,323,370 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	21	33,320,162 - 33,323,371	NCBI
Celera	21	19,583,840 - 19,587,101 (+)	NCBI		Celera
Cytogenetic Map	21	q22.11	NCBI
HuRef	21	19,809,438 - 19,812,730 (+)	NCBI		HuRef
CHM1_1	21	33,960,322 - 33,963,610 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	21	31,394,108 - 31,397,358 (+)	NCBI		T2T-CHM13v2.0

Olig2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	43,961,585 - 43,964,961 (+)	NCBI		GRCr8
mRatBN7.2	11	30,475,510 - 30,478,886 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	30,475,398 - 30,480,152 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	39,162,510 - 39,165,873 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	31,833,948 - 31,837,317 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	31,008,354 - 31,011,714 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	31,389,514 - 31,392,890 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	31,389,514 - 31,392,890 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	34,998,542 - 35,001,918 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	31,205,416 - 31,208,792 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	31,244,022 - 31,245,269 (+)	NCBI
Celera	11	30,143,763 - 30,147,131 (+)	NCBI		Celera
Cytogenetic Map	11	q11	NCBI

Olig2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955407	32,433,849 - 32,434,923 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955407	32,432,888 - 32,436,209 (+)	NCBI	ChiLan1.0	ChiLan1.0

OLIG2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	22	29,138,290 - 29,141,729 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	21	23,998,222 - 24,001,643 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	21	19,387,860 - 19,391,291 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	21	32,766,039 - 32,769,408 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

OLIG2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	31	27,674,112 - 27,677,521 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	31	27,674,107 - 27,676,822 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	31	27,667,931 - 27,670,007 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	31	27,878,129 - 27,880,215 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	31	27,878,117 - 27,880,829 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	31	27,745,936 - 27,748,017 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	31	27,755,719 - 27,757,790 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	31	28,259,002 - 28,261,083 (+)	NCBI		UU_Cfam_GSD_1.0

Olig2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404971	28,219,922 - 28,222,625 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936500	9,245,880 - 9,247,756 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936500	9,244,595 - 9,247,756 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

OLIG2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	196,599,822 - 196,600,793 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	196,596,838 - 196,602,197 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	206,661,824 - 206,663,897 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

OLIG2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	59,151,151 - 59,161,253 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	59,152,487 - 59,153,458 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666071	1,690,456 - 1,693,867 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Olig2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624745	21,270,965 - 21,272,932 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624745	21,270,804 - 21,274,225 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Olig2
238 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	441
Count of miRNA genes:	305
Interacting mature miRNAs:	349
Transcripts:	ENSMUST00000035608
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1302194	Pgia10_m	proteoglycan induced arthritis 10 (mouse)			Not determined		16	68600722	98008968	Mouse
1302096	Aod1a_m	autoimmune ovarian dysgenesis 1a (mouse)			Not determined		16	35446643	92573008	Mouse
1300928	Etia_m	ethanol induced activation (mouse)			Not determined		16	63313907	97314016	Mouse
1558740	Bpq9_m	blood pressure QTL 9 (mouse)			Not determined		16	63327336	97327472	Mouse
1301125	Sluc27_m	susceptibility to lung cancer 27 (mouse)			Not determined		16	61608644	95608764	Mouse
4141113	Tgq28_m	triglyceride QTL 28 (mouse)			Not determined			62986646	96986646	Mouse
4142262	Lmr18_m	leishmaniasis resistance 18 (mouse)			Not determined		16	69127611	98008968	Mouse
1301032	Tauph_m	tau phosphorylation (mouse)			Not determined		16	69076132	98008968	Mouse
11049573	Lmr18b_m	leishmaniasis resistance 18b (mouse)					16	69127611	98008968	Mouse
1301598	Renf2_m	renal failure 2 (mouse)			Not determined		16	70380252	98008968	Mouse
11049574	Lmr18a_m	leishmaniasis resistance 18a (mouse)					16	69127611	98008968	Mouse
11522753	Cocia19_m	cocaine-induced activity, QTL 19 (mouse)					16	69254482	98008968	Mouse

Markers in Region

AI604895

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	91,228,376 - 91,228,507	UniSTS	GRCm38
MGSCv37	16	91,228,621 - 91,228,752	UniSTS	GRCm37
Celera	16	92,311,740 - 92,311,871	UniSTS
Cytogenetic Map	16	C3.3	UniSTS
Whitehead/MRC_RH	16	965.09	UniSTS

Olig2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	91,226,668 - 91,226,918	UniSTS	GRCm38
MGSCv37	16	91,226,913 - 91,227,163	UniSTS	GRCm37
Celera	16	92,310,032 - 92,310,282	UniSTS
Cytogenetic Map	16	C3.3	UniSTS
cM Map	16	63.0	UniSTS

REN83531

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	91,226,870 - 91,227,127	UniSTS	GRCm38
MGSCv37	16	91,227,115 - 91,227,372	UniSTS	GRCm37
Celera	16	92,310,234 - 92,310,491	UniSTS
Cytogenetic Map	16	C3.3	UniSTS

REN83532

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	91,227,109 - 91,227,369	UniSTS	GRCm38
MGSCv37	16	91,227,354 - 91,227,614	UniSTS	GRCm37
Celera	16	92,310,473 - 92,310,733	UniSTS
Cytogenetic Map	16	C3.3	UniSTS

Olig2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	91,227,938 - 91,228,440	UniSTS	GRCm38
MGSCv37	16	91,228,183 - 91,228,685	UniSTS	GRCm37
Celera	16	92,311,302 - 92,311,804	UniSTS
Cytogenetic Map	16	C3.3	UniSTS

Olig2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	16	C3.3	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_016967	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036160000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB038697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC034116	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF232929	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK080615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC051967	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000035608 ⟹ ENSMUSP00000036797

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	16	91,022,345 - 91,025,565 (+)	Ensembl
GRCm38.p6 Ensembl	16	91,225,457 - 91,228,677 (+)	Ensembl

RefSeq Acc Id:

NM_016967 ⟹ NP_058663

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	16	91,022,438 - 91,025,565 (+)	NCBI
GRCm38	16	91,225,550 - 91,228,677 (+)	ENTREZGENE
MGSCv37	16	91,225,795 - 91,228,922 (+)	RGD
Celera	16	92,308,914 - 92,312,041 (+)	RGD
cM Map	16		ENTREZGENE

Sequence:

show sequence

CCAGCGGAACCCCGAAAGGTGTGGATGCTTATTACAGACCGAGCCAACACCAGCGCCCAGAGCC
AGGTTCTCCTCCGCAGCGAGCACCTCAAATCTAATTCACATTCGGAAGGTTGAAAAAAGAAGGA
TCATTCGAGAGCTTAGATCATCCCTGGGGCCATGGACTCGGACGCCAGCCTGGTGTCTAGTCGC
CCATCGTCCCCAGAACCCGATGATCTTTTTCTGCCCGCCCGGAGCAAGGGGGGAAGCAGCAGCG
GCTTCACAGGAGGGACTGTGTCCTCGTCCACGCCGAGCGACTGCCCGCCAGAGCTGAGCTCCGA
GCTACGAGGGGCCATGGGCGCGTCAGGCGCGCATCCCGGGGACAAACTGGGCGGCGGTGGCTTC
AAGTCATCTTCCTCCAGCACCTCCTCGTCCACGTCCTCGGCGGCCACGTCTTCCACCAAGAAAG
ACAAGAAGCAGATGACTGAGCCCGAGCTGCAGCAGCTGCGCCTGAAGATCAACAGCCGCGAACG
CAAGCGCATGCACGACCTCAACATCGCCATGGACGGCCTGCGGGAGGTCATGCCTTACGCGCAC
GGGCCGTCGGTGCGCAAGCTCTCCAAGATCGCCACGCTGCTGCTGGCGCGAAACTACATCCTCA
TGCTCACCAACTCGCTGGAGGAGATGAAGCGACTGGTGAGCGAGATCTACGGGGGTCACCACGC
CGGCTTCCACCCATCGGCCTGTGGCGGGCTGGCACACTCGGCGCCTCTACCCACCGCCACGGCG
CACCCCGCGGCCGCCGCGCACGCCGCGCACCACCCGGCCGTGCACCACCCCATCCTCCCTCCCG
CAGCCGCCGCCGCCGCCGCAGCCGCCGCCGCCGCAGCGGTGTCCAGCGCCTCTCTACCGGGCTC
CGGGCTGTCCTCGGTCGGATCCATCCGGCCTCCGCACGGCCTGCTCAAGTCACCGTCGGCAGCC
GCAGCCGCCCCTCTCGGAGGCGGGGGTGGAGGCAGCGGTGGCAGCGGTGGCTTCCAGCACTGGG
GCGGCATGCCGTGCCCCTGCAGCATGTGCCAGGTGCCGCCGCCGCACCACCACGTGTCGGCTAT
GGGCGCCGGCACCTTGCCGCGCCTCACCTCCGACGCCAAGTGAGCCGGCCAGCGGGGGTGCGTC
CTGGAGAGCCAAGGGCTGCGGAGCAGCGCGGACAGGCCAGCGCTGGGGCTCCGGGGCTCTGTTG
CAAGAAGGGGAGCTGGACCACGGGCTGGGCCTAGGGGATTATGGGGAGTCGAATATATGGGAAC
CGAAGCAATGGGAGCATTTGAAGCGATGGAGAGATGCGTTCGTTCCAGAACCTGGTTGACTCTT
TGGCTGAACACTCCAAGGGTCTGGGAGGCGCCATTGTACAAAACGGCCACAACGCGCGGGTACT
TTCATCCCTGGAACTTCCTGCCTGCACCCCCAGGAAGTCTAAAAACTAACTTTCCGGTGTACAA
AGATTGACTCCCTGTCTGGGCTTAGACGAGACGCAGAGCACTGCACTTGACTTCTTTCCCCCAC
TTCAGGCGGGGTAGGAGACTCCCAGGAACCGCACTGCAGAAGCGACCTCTGGGCCTCACCCTGC
AGGTTCATCCCTGGCCCAGGGCCAGGCACTAAGTTAGTAGACGCTGGCGTGGGTATCAGAAGCA
CTTAGGGTCCTGTGGTCTCAGAAGTGTGGCCTTCCCTCCTGTTGTCTCTCCTGTTGATTTGTGG
TTTCCTAACAAATCTGTGAATGTTCCTTTTCAGAGCACAGGAGCAAGCTTTACAGACGCTTAAA
ATAGCACTTGTGGAATGGAATAATCCCAAAAGTCCCGATATGGAACGGAATCCTTTTTGGGTCT
TATTTTTAAATAGATCTCCCCCCACACACACGCACACACACACTCACGCAACACACATTCTAAG
CACACATCAATTGGTTTCTTACCCGACTGGGGACGCTGTTTTTTGGTACCTGGGGGCTTGACAA
AAGAACAACATCAAAAAGTTGCTGTGAATATAGTTTGAGCTTTTTGGGAGGGGGTATTCTGTTG
GGTTTTTAATAATTTCTTGTGTGTGTAAATATAATATCAACGAAATGCGCGATGCGAAGCTCTT
TGTTCACGTGACTCCCCCCTCCGTCTAAGCCCGCTGTTTTCTTTCTGTGTCGTTGCCCTCCCAC
ACACACACCTTTTGCCACCGTTAACACGAGGGGCAAACCCCTTCATGCGCGCTCCCTGGCGCGA
CCTGCATTACAACGTGGGCTTTACTGCGCCTGCCTCCTAACCTTCCACCTCTTCCGCGCTGCCC
CTGCAGAGTGTATCTATCACCTGTTTTATTTTTGTAAAGAAAAAGAAGTGCTAAATAATATTTA
TTACTTGTTTGGTTGCATAAAACGAAACAAATGATGGAGTGTTGAGATTTTAAATAAAATTTAA
AGCAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_036160000 ⟹ XP_036015893

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	16	91,016,745 - 91,025,567 (+)	NCBI

Sequence:

show sequence

GTGTCGATTGTTTCTTCGGTTCTGAGTGAGCCTGTGGGCAGCAAACACCCTGGTCCAAGGATCG
CACGCACCTGGAGAGGCGTGGGCTGCCTAGGAGAGCTCTCCTAAAGCTCACAGCTATCCTGAAG
GGGCACGTTGCTAAAGCGAGGCAAAGCCAAAATGAAAATGCAGGAAAAGCACATTGTTCCCGCC
CCCCGCCCGGACCACCGCCACCGCCGTCGCTGCTGCCTCCACCCAGCTATAAAAACCAGCGGAA
CCCCGAAAGGTGTGGATGCTTATTACAGACCGAGCCAACACCAGCGCCCAGAGCCAGGTTCTCC
TCCGCAGCGAGCACCTCAAATCTAATTCACATTCGGAAGGTTGAAAAAAGAAGGATCATTCGAG
AGCTTAGATCATCCCTGGGGCCATGGACTCGGACGCCAGCCTGGTGTCTAGTCGCCCATCGTCC
CCAGAACCCGATGATCTTTTTCTGCCCGCCCGGAGCAAGGGGGGAAGCAGCAGCGGCTTCACAG
GAGGGACTGTGTCCTCGTCCACGCCGAGCGACTGCCCGCCAGAGCTGAGCTCCGAGCTACGAGG
GGCCATGGGCGCGTCAGGCGCGCATCCCGGGGACAAACTGGGCGGCGGTGGCTTCAAGTCATCT
TCCTCCAGCACCTCCTCGTCCACGTCCTCGGCGGCCACGTCTTCCACCAAGAAAGACAAGAAGC
AGATGACTGAGCCCGAGCTGCAGCAGCTGCGCCTGAAGATCAACAGCCGCGAACGCAAGCGCAT
GCACGACCTCAACATCGCCATGGACGGCCTGCGGGAGGTCATGCCTTACGCGCACGGGCCGTCG
GTGCGCAAGCTCTCCAAGATCGCCACGCTGCTGCTGGCGCGAAACTACATCCTCATGCTCACCA
ACTCGCTGGAGGAGATGAAGCGACTGGTGAGCGAGATCTACGGGGGTCACCACGCCGGCTTCCA
CCCATCGGCCTGTGGCGGGCTGGCACACTCGGCGCCTCTACCCACCGCCACGGCGCACCCCGCG
GCCGCCGCGCACGCCGCGCACCACCCGGCCGTGCACCACCCCATCCTCCCTCCCGCAGCCGCCG
CCGCCGCCGCAGCCGCCGCCGCCGCAGCGGTGTCCAGCGCCTCTCTACCGGGCTCCGGGCTGTC
CTCGGTCGGATCCATCCGGCCTCCGCACGGCCTGCTCAAGTCACCGTCGGCAGCCGCAGCCGCC
CCTCTCGGAGGCGGGGGTGGAGGCAGCGGTGGCAGCGGTGGCTTCCAGCACTGGGGCGGCATGC
CGTGCCCCTGCAGCATGTGCCAGGTGCCGCCGCCGCACCACCACGTGTCGGCTATGGGCGCCGG
CACCTTGCCGCGCCTCACCTCCGACGCCAAGTGAGCCGGCCAGCGGGGGTGCGTCCTGGAGAGC
CAAGGGCTGCGGAGCAGCGCGGACAGGCCAGCGCTGGGGCTCCGGGGCTCTGTTGCAAGAAGGG
GAGCTGGACCACGGGCTGGGCCTAGGGGATTATGGGGAGTCGAATATATGGGAACCGAAGCAAT
GGGAGCATTTGAAGCGATGGAGAGATGCGTTCGTTCCAGAACCTGGTTGACTCTTTGGCTGAAC
ACTCCAAGGGTCTGGGAGGCGCCATTGTACAAAACGGCCACAACGCGCGGGTACTTTCATCCCT
GGAACTTCCTGCCTGCACCCCCAGGAAGTCTAAAAACTAACTTTCCGGTGTACAAAGATTGACT
CCCTGTCTGGGCTTAGACGAGACGCAGAGCACTGCACTTGACTTCTTTCCCCCACTTCAGGCGG
GGTAGGAGACTCCCAGGAACCGCACTGCAGAAGCGACCTCTGGGCCTCACCCTGCAGGTTCATC
CCTGGCCCAGGGCCAGGCACTAAGTTAGTAGACGCTGGCGTGGGTATCAGAAGCACTTAGGGTC
CTGTGGTCTCAGAAGTGTGGCCTTCCCTCCTGTTGTCTCTCCTGTTGATTTGTGGTTTCCTAAC
AAATCTGTGAATGTTCCTTTTCAGAGCACAGGAGCAAGCTTTACAGACGCTTAAAATAGCACTT
GTGGAATGGAATAATCCCAAAAGTCCCGATATGGAACGGAATCCTTTTTGGGTCTTATTTTTAA
ATAGATCTCCCCCCACACACACGCACACACACACTCACGCAACACACATTCTAAGCACACATCA
ATTGGTTTCTTACCCGACTGGGGACGCTGTTTTTTGGTACCTGGGGGCTTGACAAAAGAACAAC
ATCAAAAAGTTGCTGTGAATATAGTTTGAGCTTTTTGGGAGGGGGTATTCTGTTGGGTTTTTAA
TAATTTCTTGTGTGTGTAAATATAATATCAACGAAATGCGCGATGCGAAGCTCTTTGTTCACGT
GACTCCCCCCTCCGTCTAAGCCCGCTGTTTTCTTTCTGTGTCGTTGCCCTCCCACACACACACC
TTTTGCCACCGTTAACACGAGGGGCAAACCCCTTCATGCGCGCTCCCTGGCGCGACCTGCATTA
CAACGTGGGCTTTACTGCGCCTGCCTCCTAACCTTCCACCTCTTCCGCGCTGCCCCTGCAGAGT
GTATCTATCACCTGTTTTATTTTTGTAAAGAAAAAGAAGTGCTAAATAATATTTATTACTTGTT
TGGTTGCATAAAACGAAACAAATGATGGAGTGTTGAGATTTTAAATAAAATTTAAAGCAAGG

hide sequence

Protein Sequences


Protein RefSeqs	NP_058663	(Get FASTA)	NCBI Sequence Viewer
	XP_036015893	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAF61722	(Get FASTA)	NCBI Sequence Viewer
	AAH51967	(Get FASTA)	NCBI Sequence Viewer
	BAB18907	(Get FASTA)	NCBI Sequence Viewer
	BAC37958	(Get FASTA)	NCBI Sequence Viewer
	EDL03834	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000036797
	ENSMUSP00000036797.9
GenBank Protein	Q9EQW6	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_058663 ⟸ NM_016967

- UniProtKB:

Q9JKN4 (UniProtKB/Swiss-Prot), Q9EQW6 (UniProtKB/Swiss-Prot), Q542S0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDSDASLVSSRPSSPEPDDLFLPARSKGGSSSGFTGGTVSSSTPSDCPPELSSELRGAMGASGA
HPGDKLGGGGFKSSSSSTSSSTSSAATSSTKKDKKQMTEPELQQLRLKINSRERKRMHDLNIAM
DGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEIYGGHHAGFHPSACGGL
AHSAPLPTATAHPAAAAHAAHHPAVHHPILPPAAAAAAAAAAAAAVSSASLPGSGLSSVGSIRP
PHGLLKSPSAAAAAPLGGGGGGSGGSGGFQHWGGMPCPCSMCQVPPPHHHVSAMGAGTLPRLTS
DAK

hide sequence

Ensembl Acc Id:

ENSMUSP00000036797 ⟸ ENSMUST00000035608

RefSeq Acc Id:	XP_036015893 ⟸ XM_036160000
- Peptide Label:	isoform X1
- UniProtKB:	Q9EQW6 (UniProtKB/Swiss-Prot), Q9JKN4 (UniProtKB/Swiss-Prot), Q542S0 (UniProtKB/TrEMBL)

Protein Domains

bHLH

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9EQW6-F1-model_v2	AlphaFold	Q9EQW6	1-323	view protein structure

Promoters

RGD ID:

13674426

Promoter ID:

EPDNEW_M21362

Type:

multiple initiation site

Name:

Olig2_1

Description:

Mus musculus oligodendrocyte transcription factor 2 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	16	91,225,572 - 91,225,632	EPDNEW

RGD ID:

6827316

Promoter ID:

MM_KWN:21685

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Brain, ES_Cell

Transcripts:

NM_016967

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	16	91,225,674 - 91,226,174 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1355331	AgrOrtholog
Ensembl Genes	ENSMUSG00000039830	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000035608	ENTREZGENE
	ENSMUST00000035608.10	UniProtKB/Swiss-Prot
Gene3D-CATH	4.10.280.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	bHLH_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	bHLH_transcription_factors	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HLH_DNA-bd_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Olig2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:50913	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:1355331	ENTREZGENE
NCBI Gene	50913	ENTREZGENE
PANTHER	BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR19290:SF32	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	HLH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Olig2	PhenoGen
PROSITE	BHLH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	HLH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF47459	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	OLIG2_MOUSE	UniProtKB/Swiss-Prot
	Q542S0	ENTREZGENE, UniProtKB/TrEMBL
	Q9EQW6	ENTREZGENE
	Q9JKN4	ENTREZGENE
UniProt Secondary	Q9JKN4	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype