Wnt10a (wingless-type MMTV integration site family, member 10A) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Wnt10a (wingless-type MMTV integration site family, member 10A) Mus musculus
Analyze
Symbol: Wnt10a
Name: wingless-type MMTV integration site family, member 10A
RGD ID: 1315959
MGI Page MGI
Description: Predicted to enable cytokine activity and frizzled binding activity. Acts upstream of or within neural crest cell differentiation; positive regulation of gene expression; and regulation of odontogenesis of dentin-containing tooth. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including alimentary system; brain; genitourinary system; integumental system; and sensory organ. Human ortholog(s) of this gene implicated in Schopf-Schulz-Passarge syndrome; ectodermal dysplasia; and tooth agenesis. Orthologous to human WNT10A (Wnt family member 10A).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: protein Wnt-10a; wingless related MMTV integration site 10a
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39174,831,178 - 74,843,335 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl174,830,675 - 74,843,338 (+)EnsemblGRCm39 Ensembl
GRCm38174,792,019 - 74,804,176 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl174,791,516 - 74,804,179 (+)EnsemblGRCm38mm10GRCm38
MGSCv37174,838,593 - 74,850,750 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36174,724,723 - 74,737,383 (+)NCBIMGSCv36mm8
Celera175,347,091 - 75,359,286 (+)NCBICelera
Cytogenetic Map1C4NCBI
cM Map138.54NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Lunatic fringe, FGF, and BMP regulate the Notch pathway during epithelial morphogenesis of teeth. Mustonen T, etal., Dev Biol 2002 Aug 15;248(2):281-93.
4. Wnt10a is involved in AER formation during chick limb development. Narita T, etal., Dev Dyn. 2005 Jun;233(2):282-7.
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. The Wnt Homepage Roel Nusse - Howard Hughes Medical Institute and the Department of Developmental Biology at Stanford University, California, USA
12. Alternative wnt signaling is initiated by distinct receptors. van Amerongen R, etal., Sci Signal. 2008 Sep 2;1(35):re9.
13. Wnt10a regulates dentin sialophosphoprotein mRNA expression and possibly links odontoblast differentiation and tooth morphogenesis. Yamashiro T, etal., Differentiation. 2007 Jun;75(5):452-62. Epub 2007 Feb 5.
Additional References at PubMed
PMID:8875992   PMID:9769173   PMID:9889131   PMID:10349636   PMID:10585256   PMID:10642790   PMID:11042159   PMID:11076861   PMID:11429295   PMID:11520664   PMID:11735226   PMID:11914369  
PMID:11973284   PMID:12477932   PMID:12502739   PMID:12591596   PMID:12815618   PMID:14681479   PMID:15044261   PMID:15226823   PMID:15342465   PMID:15489334   PMID:15880404   PMID:16141072  
PMID:16141073   PMID:16602821   PMID:16678101   PMID:16806848   PMID:16813524   PMID:17804636   PMID:17943183   PMID:17951031   PMID:18287559   PMID:18351675   PMID:18364260   PMID:18635608  
PMID:18676816   PMID:18991257   PMID:19164599   PMID:19165927   PMID:19185060   PMID:19282366   PMID:19515997   PMID:19562671   PMID:19598129   PMID:19619491   PMID:19806668   PMID:20940229  
PMID:21041481   PMID:21203463   PMID:21267068   PMID:21600200   PMID:21677750   PMID:21757651   PMID:21872687   PMID:21873635   PMID:21876526   PMID:21936019   PMID:22024319   PMID:22234613  
PMID:22351753   PMID:22956684   PMID:23178591   PMID:23190887   PMID:23376422   PMID:23603361   PMID:23712503   PMID:23884445   PMID:24194600   PMID:24394376   PMID:24586192   PMID:24952961  
PMID:25428587   PMID:25629078   PMID:25795715   PMID:25805134   PMID:26450968   PMID:26581094   PMID:27071460   PMID:27136753   PMID:27362799   PMID:27414999   PMID:27626380   PMID:27771714  
PMID:27864382   PMID:28506989   PMID:28589954   PMID:28813421   PMID:28834739   PMID:29145476   PMID:29596490   PMID:30315998   PMID:30347193   PMID:30911276   PMID:30940800   PMID:30944305  
PMID:31167144   PMID:31220272   PMID:31541181   PMID:33141892   PMID:33935652   PMID:35582421   PMID:35831952   PMID:36305473   PMID:36833267   PMID:36899896   PMID:37838801   PMID:38274045  
PMID:38355793  


Genomics

Comparative Map Data
Wnt10a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39174,831,178 - 74,843,335 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl174,830,675 - 74,843,338 (+)EnsemblGRCm39 Ensembl
GRCm38174,792,019 - 74,804,176 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl174,791,516 - 74,804,179 (+)EnsemblGRCm38mm10GRCm38
MGSCv37174,838,593 - 74,850,750 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36174,724,723 - 74,737,383 (+)NCBIMGSCv36mm8
Celera175,347,091 - 75,359,286 (+)NCBICelera
Cytogenetic Map1C4NCBI
cM Map138.54NCBI
WNT10A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382218,874,116 - 218,893,928 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2218,880,852 - 218,899,581 (+)EnsemblGRCh38hg38GRCh38
GRCh372219,745,574 - 219,758,650 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362219,453,499 - 219,466,895 (+)NCBINCBI36Build 36hg18NCBI36
Build 342219,570,759 - 219,584,156NCBI
Celera2213,515,015 - 213,528,391 (+)NCBICelera
Cytogenetic Map2q35NCBI
HuRef2211,599,762 - 211,613,219 (+)NCBIHuRef
CHM1_12219,752,633 - 219,766,029 (+)NCBICHM1_1
T2T-CHM13v2.02219,362,519 - 219,382,296 (+)NCBIT2T-CHM13v2.0
Wnt10a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8983,798,594 - 83,811,060 (+)NCBIGRCr8
mRatBN7.2976,349,931 - 76,362,400 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl976,349,931 - 76,362,400 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx984,795,104 - 84,807,594 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0989,924,044 - 89,936,533 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0988,310,219 - 88,322,718 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0982,053,581 - 82,066,047 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl982,053,581 - 82,066,047 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0981,816,108 - 81,829,217 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4974,124,403 - 74,137,508 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1974,271,590 - 74,284,435 (+)NCBI
Celera973,922,407 - 73,934,776 (+)NCBICelera
Cytogenetic Map9q33NCBI
Wnt10a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545314,528,153 - 14,540,818 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545314,528,373 - 14,540,801 (-)NCBIChiLan1.0ChiLan1.0
WNT10A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213121,513,053 - 121,527,016 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B121,528,018 - 121,542,012 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B106,140,859 - 106,154,301 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B224,735,800 - 224,748,567 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B224,736,598 - 224,747,912 (+)Ensemblpanpan1.1panPan2
WNT10A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13725,463,064 - 25,475,407 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3725,462,748 - 25,474,764 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3726,283,474 - 26,295,608 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03725,478,692 - 25,490,806 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3725,478,251 - 25,538,779 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13725,383,325 - 25,395,473 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03725,318,096 - 25,330,240 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03725,339,120 - 25,351,266 (+)NCBIUU_Cfam_GSD_1.0
Wnt10a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303174,966,359 - 174,979,148 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365691,309,106 - 1,321,931 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365691,309,140 - 1,321,923 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WNT10A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15120,925,499 - 120,938,430 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115120,925,204 - 120,939,032 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215134,032,841 - 134,033,943 (-)NCBISscrofa10.2Sscrofa10.2susScr3
WNT10A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110104,781,705 - 104,795,500 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10104,782,191 - 104,794,854 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604094,605,980 - 94,620,038 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wnt10a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248236,128,256 - 6,140,235 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248236,126,238 - 6,140,764 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Wnt10a
370 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:218
Count of miRNA genes:185
Interacting mature miRNAs:202
Transcripts:ENSMUST00000006718
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1301714Vertcling_mvertical clinging (mouse)Not determined14293803176938167Mouse
4142394Mssq1_mmandible size and shape QTL 1 (mouse)Not determined73615692107615830Mouse
18182931Metl1_mmetabolite locus 1, pyridoxate (mouse)14127539975275399Mouse
4141305Tgq9_mtriglyceride QTL 9 (mouse)Not determined5142160585421605Mouse
4141625Emo4_memotionality 4 (mouse)Not determined6807134586235027Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
1301211Bbaa11_mB.burgdorferi-associated arthritis 11 (mouse)Not determined14888900682889210Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
14697705Stsl3b_mSalmonella typhimurium susceptibility locus 3b (mouse)17413915981777715Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139132808126445310Mouse
1302146Cocrb1_mcocaine related behavior 1 (mouse)Not determined170133533104139557Mouse
1357505Vtbt1_mvertebral trabecular bone trait 1 (mouse)Not determined15626621490266360Mouse
4141032Wbcc1_mwhite blood cell count 1 (mouse)Not determined4225966776259667Mouse
14746998Mancz1_mmandible centroid size 1 (mouse)15794135191941351Mouse
1301444Alcw5_malcohol withdrawal 5 (mouse)Not determined15854919192549443Mouse
1300746Skl1_mskeletal size (tail length) 1 (mouse)Not determined15799197791992080Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
14747009Manh49_mmandible shape 49 (mouse)15794135191941351Mouse
1301616Yaa2_mY-linked autoimmune acceleration 2 (mouse)Not determined14685469080854839Mouse
1300976Bmd19_mbone mineral density 19 (mouse)Not determined173266214108838414Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
10043965Obq24_mobesity QTL 24 (mouse)Not determined15089021684890216Mouse
1301430Cdcs2_mcytokine deficiency colitis susceptibility 2 (mouse)Not determined14889234582892485Mouse
4141914Gcsfis_mG-CSF induced splenomegaly (mouse)Not determined74516235148715579Mouse
1301748Abbp1_mA/J and C57BL/6 blood pressure 1 (mouse)Not determined162946755120529678Mouse
1558717Ses1a_msalmonella enteritidis susceptibility 1a (mouse)Not determined15672692290727077Mouse
1301304Hrq3_mheart rate quantitative locus 3 (mouse)Not determined173615692107615830Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1558905Gct7_mgranulosa cell tumorigenesis 7 (mouse)Not determined14734989481350013Mouse
4141393Mol2_mmodifier of LPS-response 2 (mouse)Not determined7162467978183144Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173755175147125370Mouse
1301667Lxw5_mlupus BXSB x NZW 5 (mouse)Not determined15854919192549443Mouse
1558822Vas1_mautoimmune vasitis resistance 1 (mouse)Not determined14888900682889210Mouse
27095918Ulnl1_mulna length 1, 5 week (mouse)167339159129727737Mouse
1302119Cia15_mcollagen induced arthritis 15 (mouse)Not determined16588900688496101Mouse
1301670Ssta1_msusceptibility to Salmonella typhimurium antigens 1 (mouse)Not determined14594675579946882Mouse
1357741Nidd5k_mNidd5 on KK-A<y> (mouse)Not determined15597494889975057Mouse
1301162Skull1_mskull morphology 1 (mouse)Not determined15799197791992080Mouse
1301225Sle7_msystematic lupus erythematosus susceptibility 7 (mouse)Not determined14685469080854839Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163920002153557562Mouse
1357679Egrm1_mearly growth rate, maternal effect 1 (mouse)Not determined15799197791992080Mouse
4142467Wbcq1_mwhite blood cell quantitative locus 1 (mouse)Not determined15626621490266360Mouse
1301166Thypr2_mthymocyte proliferative response 2 (mouse)Not determined14127312475273271Mouse
1301933Insq6_minsulin QTL 6 (mouse)Not determined15672692290727077Mouse

Markers in Region
Wnt10a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38174,803,446 - 74,803,971UniSTSGRCm38
MGSCv37174,850,020 - 74,850,545UniSTSGRCm37
Celera175,358,556 - 75,359,081UniSTS
Cytogenetic Map1C3UniSTS
cM Map1 UniSTS
U61969  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38174,803,977 - 74,804,098UniSTSGRCm38
MGSCv37174,850,551 - 74,850,672UniSTSGRCm37
Celera175,359,087 - 75,359,208UniSTS
Cytogenetic Map1C3UniSTS
Whitehead/MRC_RH11094.02UniSTS
Wnt10a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1C3UniSTS
Wnt10a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38174,793,412 - 74,793,548UniSTSGRCm38
MGSCv37174,839,986 - 74,840,122UniSTSGRCm37
Celera175,348,488 - 75,348,624UniSTS
Cytogenetic Map1C3UniSTS
Wnt10a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1C3UniSTS
cM Map1 UniSTS
Wnt10a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38174,792,245 - 74,793,523UniSTSGRCm38
MGSCv37174,838,819 - 74,840,097UniSTSGRCm37
Celera175,347,317 - 75,348,599UniSTS
Cytogenetic Map1C3UniSTS
Wnt10a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1C3UniSTS


Expression


Sequence


Ensembl Acc Id: ENSMUST00000006718   ⟹   ENSMUSP00000006718
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl174,830,675 - 74,843,338 (+)Ensembl
GRCm38.p6 Ensembl174,791,516 - 74,804,179 (+)Ensembl
Ensembl Acc Id: ENSMUST00000187238   ⟹   ENSMUSP00000139656
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl174,832,522 - 74,842,654 (+)Ensembl
GRCm38.p6 Ensembl174,793,363 - 74,803,495 (+)Ensembl
RefSeq Acc Id: NM_009518   ⟹   NP_033544
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39174,831,178 - 74,843,335 (+)NCBI
GRCm38174,792,019 - 74,804,176 (+)ENTREZGENE
MGSCv37174,838,593 - 74,850,750 (+)RGD
Celera175,347,091 - 75,359,286 (+)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_033544   ⟸   NM_009518
- Peptide Label: precursor
- UniProtKB: P70701 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000006718   ⟸   ENSMUST00000006718
Ensembl Acc Id: ENSMUSP00000139656   ⟸   ENSMUST00000187238

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P70701-F1-model_v2 AlphaFold P70701 1-417 view protein structure

Promoters
RGD ID:6874102
Promoter ID:EPDNEW_M502
Type:initiation region
Name:Wnt10a_1
Description:Mus musculus wingless-type MMTV integration site family, member10A , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38174,792,033 - 74,792,093EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:108071 AgrOrtholog
Ensembl Genes ENSMUSG00000026167 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000006718 ENTREZGENE
  ENSMUST00000006718.15 UniProtKB/Swiss-Prot
  ENSMUST00000187238.2 UniProtKB/TrEMBL
Gene3D-CATH 3.30.2460.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Wnt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Wnt10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Wnt_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Wnt_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:22409 UniProtKB/Swiss-Prot
MGD MGI:108071 ENTREZGENE
NCBI Gene 22409 ENTREZGENE
PANTHER PROTEIN WNT-10A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12027 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam wnt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Wnt10a PhenoGen
PRINTS WNT10PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WNTPROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE WNT1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART WNT1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WP71_MOUSE UniProtKB/TrEMBL
  P70701 ENTREZGENE
  Q9CUV1_MOUSE UniProtKB/TrEMBL
  WN10A_MOUSE UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-07-01 Wnt10a  wingless-type MMTV integration site family, member 10A    wingless related MMTV integration site 10a  Symbol and/or name change 5135510 APPROVED