Galt (galactose-1-phosphate uridyl transferase) - Rat Genome Database

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Gene: Galt (galactose-1-phosphate uridyl transferase) Mus musculus
Analyze
Symbol: Galt
Name: galactose-1-phosphate uridyl transferase
RGD ID: 1315127
MGI Page MGI
Description: Enables UDP-glucose:hexose-1-phosphate uridylyltransferase activity. Involved in galactose catabolic process via UDP-galactose. Acts upstream of or within glycolytic process from galactose. Predicted to be located in Golgi apparatus. Predicted to be active in cytoplasm. Is expressed in early tubule; embryo; embryo endoderm; hindgut diverticulum; and renal interstitium. Used to study galactosemia. Human ortholog(s) of this gene implicated in classic galactosemia. Orthologous to human GALT (galactose-1-phosphate uridylyltransferase).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: AW553376; gal-1-P uridylyltransferase; galactose-1-phosphate uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39441,755,517 - 41,759,243 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl441,755,228 - 41,758,695 (+)EnsemblGRCm39 Ensembl
GRCm38441,755,517 - 41,759,243 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl441,755,228 - 41,758,695 (+)EnsemblGRCm38mm10GRCm38
MGSCv37441,702,126 - 41,705,998 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36441,944,015 - 41,947,191 (+)NCBIMGSCv36mm8
Celera441,416,035 - 41,419,907 (+)NCBICelera
Cytogenetic Map4A5NCBI
cM Map422.07NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1311971   PMID:1427861   PMID:2165966   PMID:2850257   PMID:6297853   PMID:7323947   PMID:7508415   PMID:7774911   PMID:8902187   PMID:10349636   PMID:10381349   PMID:10430609  
PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11286504   PMID:12477932   PMID:14681479   PMID:14741191   PMID:15161859   PMID:15489334   PMID:15862277   PMID:16141072  
PMID:16141073   PMID:16935536   PMID:17433749   PMID:17975019   PMID:18287559   PMID:18973680   PMID:21116719   PMID:21246399   PMID:21267068   PMID:21873635   PMID:24549051   PMID:26773505  
PMID:28245920   PMID:28844959   PMID:30228991   PMID:31362041   PMID:33199205   PMID:38355793  


Genomics

Comparative Map Data
Galt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39441,755,517 - 41,759,243 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl441,755,228 - 41,758,695 (+)EnsemblGRCm39 Ensembl
GRCm38441,755,517 - 41,759,243 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl441,755,228 - 41,758,695 (+)EnsemblGRCm38mm10GRCm38
MGSCv37441,702,126 - 41,705,998 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36441,944,015 - 41,947,191 (+)NCBIMGSCv36mm8
Celera441,416,035 - 41,419,907 (+)NCBICelera
Cytogenetic Map4A5NCBI
cM Map422.07NCBI
GALT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38934,646,675 - 34,651,035 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl934,638,133 - 34,651,035 (+)EnsemblGRCh38hg38GRCh38
GRCh37934,646,672 - 34,651,032 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36934,636,635 - 34,640,574 (+)NCBINCBI36Build 36hg18NCBI36
Build 34934,636,634 - 34,640,279NCBI
Celera934,578,106 - 34,582,045 (+)NCBICelera
Cytogenetic Map9p13.3NCBI
HuRef934,600,857 - 34,604,875 (+)NCBIHuRef
CHM1_1934,646,369 - 34,650,378 (+)NCBICHM1_1
T2T-CHM13v2.0934,665,194 - 34,669,563 (+)NCBIT2T-CHM13v2.0
Galt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8561,722,871 - 61,726,128 (+)NCBIGRCr8
mRatBN7.2556,927,039 - 56,930,284 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl556,926,724 - 56,930,265 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx558,901,349 - 58,904,565 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0560,720,179 - 60,723,395 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0560,706,240 - 60,709,458 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0558,144,679 - 58,147,946 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl558,144,705 - 58,147,929 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0562,669,071 - 62,672,312 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4559,185,418 - 59,188,642 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1559,185,596 - 59,188,821 (+)NCBI
Celera555,519,202 - 55,522,426 (+)NCBICelera
Cytogenetic Map5q22NCBI
Galt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554721,487,173 - 1,490,986 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554721,487,173 - 1,490,548 (-)NCBIChiLan1.0ChiLan1.0
GALT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21189,953,184 - 89,957,199 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1989,959,118 - 89,963,129 (-)NCBINHGRI_mPanPan1
GALT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11151,319,812 - 51,323,337 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1151,319,347 - 51,334,802 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1149,948,167 - 49,951,692 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01152,260,552 - 52,264,077 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1152,260,570 - 52,264,077 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11150,923,255 - 50,926,780 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01150,791,395 - 50,794,920 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01151,556,170 - 51,559,695 (+)NCBIUU_Cfam_GSD_1.0
Galt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947166,178,746 - 166,182,469 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365242,726,749 - 2,730,564 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365242,726,795 - 2,730,049 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GALT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1032,151,177 - 32,154,740 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11032,151,150 - 32,154,792 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21036,291,000 - 36,294,635 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GALT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11245,970,655 - 45,974,669 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1245,970,794 - 45,974,581 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603843,087,542 - 43,092,093 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Galt
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473639,040,009 - 39,043,444 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473639,040,139 - 39,043,449 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Galt
69 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1437
Count of miRNA genes:554
Interacting mature miRNAs:682
Transcripts:ENSMUST00000084695, ENSMUST00000108038, ENSMUST00000130698, ENSMUST00000132760, ENSMUST00000133106, ENSMUST00000135734, ENSMUST00000147719, ENSMUST00000150908, ENSMUST00000151490, ENSMUST00000154275
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301203Alcp8_malcohol preference locus 8 (mouse)Not determined41739516051395290Mouse
1301586Stheal3_msoft tissue heal 3 (mouse)Not determined42865844262658566Mouse
10401115Pgia35_mproteoglycan induced arthritis 35 (mouse)Not determined41256237746562509Mouse
39128211Lwq22_mliver weight QTL 22 (mouse)41789261688982216Mouse
1558992Ses8_msalmonella enteritidis susceptibility 8 (mouse)Not determined4868324042683429Mouse
4141302Ssrq5_mstress response QTL 5 (mouse)Not determined868324042683430Mouse
4141555Nbwa2_mNZB and NZW autoimmunity 2 (mouse)Not determined41789251551892635Mouse
10412178Habiir2_mhyperoxic acute lung injury imprinted region 2 (mouse)Not determined43945212663283678Mouse
1300574Im2_mimmunoregulatory 2 (mouse)Not determined42807768262077816Mouse
4142318Lyr2_mlymphoma resistance 2 (mouse)Not determined1401045763283678Mouse
12880405Jcdq1_mjoint cartilage degeneration QTL 1 (mouse)41256237746562509Mouse
1301697Sluc18_msusceptibility to lung cancer 18 (mouse)Not determined42237344856373612Mouse
1357453Kidq4_mkidney weight QTL 4 (mouse)Not determined41789261688982216Mouse
4142047Mvwf3_mmodifier of von Willebrand factor 3 (mouse)Not determined14010457117072206Mouse
1357877Synch1_msynechia 1 (mouse)Not determined42870992562710107Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
1300977Mopkd1_mmodifier of polycystic kidney disease progression 1 (mouse)Not determined43655083970550967Mouse
25440481Moaq1_mmodifier of alien QTL 1 (mouse)41950000046000000Mouse
1301237Alcp7_malcohol preference locus 7 (mouse)Not determined41739516051395290Mouse
1302075Bdln6_mbody length 6 (mouse)Not determined42237344856373612Mouse
4141911W6q15_mweight 6 weeks QTL 15 (mouse)Not determined1789261688982216Mouse
1302010Wta1_mweight adult 1 (mouse)Not determined4868324042683429Mouse
4142290Ssrq9_mstress response QTL 9 (mouse)Not determined3439516046332776Mouse
1301437Scon1_msucrose consumption 1 (mouse)Not determined42237344856373612Mouse
10401905Sicd3_mseizure-induced cell death 3 (mouse)Not determined4939552543760862Mouse
1301473Triglq1_mtriglyceride QTL 1 (mouse)Not determined4868324042683429Mouse
1300769Pcyts2_mplasmacytoma susceptibility 2 (mouse)Not determined42211194456112145Mouse
1301792Hdlq10_mHDL QTL 10 (mouse)Not determined43585970769859853Mouse
1301990Arvm1_mautoimmune renal vasculitis 1 (mouse)Not determined42933264663332776Mouse
1302116Bbaa1_mB.burgdorferi-associated arthritis 1 (mouse)Not determined43825093072251078Mouse
1302058Hrtfm3_mheart failure modifier 3 (mouse)Not determined42211194456112145Mouse
1302184Aaom1_mautoimmune aoritis in MRL mice 1 (mouse)Not determined42432229946332776Mouse
26884449Sklq2_mskull length QTL 2, 5 week (mouse)436700000128993793Mouse
1302125Lxw1_mlupus BXSB x NZW 1 (mouse)Not determined4868324042683429Mouse

Markers in Region
AW553376  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381866,491,600 - 66,491,698UniSTSGRCm38
GRCm38441,758,184 - 41,758,546UniSTSGRCm38
MGSCv37441,705,057 - 41,705,419UniSTSGRCm37
MGSCv371866,651,254 - 66,651,352UniSTSGRCm37
Celera1867,778,123 - 67,778,221UniSTS
Celera441,418,966 - 41,419,328UniSTS
Cytogenetic Map18E1UniSTS
Cytogenetic Map4A5UniSTS
cM Map419.9UniSTS
cM Map419.9UniSTS
Whitehead/MRC_RH18840.95UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001302511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001369135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001369140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001369141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001369142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001369143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001369144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001369147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001395630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_016658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF314226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL807796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV027352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB610075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB868849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY282576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY289084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY416479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX239267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M96265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U41282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000084695   ⟹   ENSMUSP00000081745
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl441,755,228 - 41,758,695 (+)Ensembl
GRCm38.p6 Ensembl441,755,228 - 41,758,695 (+)Ensembl
Ensembl Acc Id: ENSMUST00000108038   ⟹   ENSMUSP00000103673
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl441,755,228 - 41,758,695 (+)Ensembl
GRCm38.p6 Ensembl441,755,228 - 41,758,695 (+)Ensembl
Ensembl Acc Id: ENSMUST00000130698
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl441,756,210 - 41,758,695 (+)Ensembl
GRCm38.p6 Ensembl441,756,210 - 41,758,695 (+)Ensembl
Ensembl Acc Id: ENSMUST00000132760
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl441,755,758 - 41,757,480 (+)Ensembl
GRCm38.p6 Ensembl441,755,758 - 41,757,480 (+)Ensembl
Ensembl Acc Id: ENSMUST00000133106
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl441,756,262 - 41,757,778 (+)Ensembl
GRCm38.p6 Ensembl441,756,262 - 41,757,778 (+)Ensembl
Ensembl Acc Id: ENSMUST00000135734
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl441,755,253 - 41,756,447 (+)Ensembl
GRCm38.p6 Ensembl441,755,253 - 41,756,447 (+)Ensembl
Ensembl Acc Id: ENSMUST00000147719
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl441,755,961 - 41,757,480 (+)Ensembl
GRCm38.p6 Ensembl441,755,961 - 41,757,480 (+)Ensembl
Ensembl Acc Id: ENSMUST00000150908
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl441,755,840 - 41,757,272 (+)Ensembl
GRCm38.p6 Ensembl441,755,840 - 41,757,272 (+)Ensembl
Ensembl Acc Id: ENSMUST00000151490
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl441,755,253 - 41,757,549 (+)Ensembl
GRCm38.p6 Ensembl441,755,253 - 41,757,549 (+)Ensembl
Ensembl Acc Id: ENSMUST00000154275
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl441,756,254 - 41,758,238 (+)Ensembl
GRCm38.p6 Ensembl441,756,254 - 41,758,238 (+)Ensembl
RefSeq Acc Id: NM_001302511   ⟹   NP_001289440
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39441,756,262 - 41,759,243 (+)NCBI
GRCm38441,756,262 - 41,759,243 (+)NCBI
Celera441,416,010 - 41,420,006 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001369135   ⟹   NP_001356064
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39441,755,517 - 41,759,243 (+)NCBI
GRCm38441,755,517 - 41,759,243 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001369140   ⟹   NP_001356069
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39441,755,517 - 41,759,243 (+)NCBI
GRCm38441,755,517 - 41,759,243 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001369141   ⟹   NP_001356070
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39441,755,517 - 41,759,243 (+)NCBI
GRCm38441,755,517 - 41,759,243 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001369142   ⟹   NP_001356071
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39441,755,517 - 41,759,243 (+)NCBI
GRCm38441,755,517 - 41,759,243 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001369143   ⟹   NP_001356072
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39441,755,517 - 41,759,243 (+)NCBI
GRCm38441,755,517 - 41,759,243 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001369144   ⟹   NP_001356073
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39441,755,517 - 41,759,243 (+)NCBI
GRCm38441,755,517 - 41,759,243 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001369147   ⟹   NP_001356076
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39441,755,517 - 41,759,243 (+)NCBI
GRCm38441,755,517 - 41,759,243 (+)NCBI
Sequence:
RefSeq Acc Id: NM_016658   ⟹   NP_057867
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39441,755,517 - 41,759,243 (+)NCBI
GRCm38441,755,517 - 41,759,243 (+)NCBI
MGSCv37441,702,126 - 41,705,998 (+)RGD
Celera441,416,010 - 41,420,006 (+)NCBI
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_057867   ⟸   NM_016658
- Peptide Label: isoform 1
- UniProtKB: A2AMS3 (UniProtKB/TrEMBL),   A2AMS2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001289440   ⟸   NM_001302511
- Peptide Label: isoform 2
- UniProtKB: Q3TQJ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001356071   ⟸   NM_001369142
- Peptide Label: isoform 4
- UniProtKB: A0A8V5L0N9 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001356070   ⟸   NM_001369141
- Peptide Label: isoform 4
- UniProtKB: A0A8V5L0N9 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001356064   ⟸   NM_001369135
- Peptide Label: isoform 3
- UniProtKB: A2AMS2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001356076   ⟸   NM_001369147
- Peptide Label: isoform 2
- UniProtKB: Q3TQJ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001356069   ⟸   NM_001369140
- Peptide Label: isoform 4
- UniProtKB: A0A8V5L0N9 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001356072   ⟸   NM_001369143
- Peptide Label: isoform 2
- UniProtKB: Q3TQJ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001356073   ⟸   NM_001369144
- Peptide Label: isoform 2
- UniProtKB: Q3TQJ2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000081745   ⟸   ENSMUST00000084695
Ensembl Acc Id: ENSMUSP00000103673   ⟸   ENSMUST00000108038
Protein Domains
Galactose-1-phosphate uridyl transferase C-terminal   Galactose-1-phosphate uridyl transferase N-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q03249-F1-model_v2 AlphaFold Q03249 1-379 view protein structure

Promoters
RGD ID:6835356
Promoter ID:MM_KWN:37185
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   Brain,   ES_Cell,   Kidney,   Liver,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000108038,   OTTMUST00000015297,   OTTMUST00000015299,   OTTMUST00000015300,   OTTMUST00000015301,   OTTMUST00000015302,   OTTMUST00000015303,   OTTMUST00000015305,   OTTMUST00000015306,   UC008SJP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36441,702,381 - 41,703,197 (+)MPROMDB
RGD ID:6883126
Promoter ID:EPDNEW_M5014
Type:initiation region
Name:Galt_2
Description:Mus musculus galactose-1-phosphate uridyl transferase , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M5015  EPDNEW_M5017  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38441,755,313 - 41,755,373EPDNEW
RGD ID:6883128
Promoter ID:EPDNEW_M5015
Type:initiation region
Name:Galt_3
Description:Mus musculus galactose-1-phosphate uridyl transferase , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M5014  EPDNEW_M5017  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38441,755,556 - 41,755,616EPDNEW
RGD ID:6883132
Promoter ID:EPDNEW_M5017
Type:initiation region
Name:Galt_1
Description:Mus musculus galactose-1-phosphate uridyl transferase , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M5014  EPDNEW_M5015  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38441,756,262 - 41,756,322EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:95638 AgrOrtholog
Ensembl Genes ENSMUSG00000036073 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000084695 ENTREZGENE
  ENSMUST00000084695.12 UniProtKB/TrEMBL
  ENSMUST00000108038.3 UniProtKB/TrEMBL
  ENSMUST00000130698 ENTREZGENE
  ENSMUST00000130698.8 UniProtKB/TrEMBL
  ENSMUST00000132760.8 UniProtKB/TrEMBL
  ENSMUST00000133106.2 UniProtKB/TrEMBL
  ENSMUST00000150908.8 UniProtKB/TrEMBL
  ENSMUST00000151490.8 UniProtKB/TrEMBL
  ENSMUST00000154275 ENTREZGENE
  ENSMUST00000154275.8 UniProtKB/TrEMBL
Gene3D-CATH 3.30.428.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro GalP_UDPtransf1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GalP_UDPtransf1_His-AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GalP_Utransf_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GalP_Utransf_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HIT-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:14430 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:95638 ENTREZGENE
NCBI Gene 14430 ENTREZGENE
PANTHER GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11943 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam GalP_UDP_tr_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GalP_UDP_transf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Galt PhenoGen
PIRSF GalT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE GAL_P_UDP_TRANSF_I UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54197 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8V5KX58_MOUSE UniProtKB/TrEMBL
  A0A8V5KX60_MOUSE UniProtKB/TrEMBL
  A0A8V5KY85_MOUSE UniProtKB/TrEMBL
  A0A8V5L0N9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8V5L185_MOUSE UniProtKB/TrEMBL
  A2AMS2 ENTREZGENE, UniProtKB/TrEMBL
  A2AMS3 ENTREZGENE, UniProtKB/TrEMBL
  GALT_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TQJ2 ENTREZGENE, UniProtKB/TrEMBL
  Q91VQ7 ENTREZGENE
UniProt Secondary Q91VQ7 UniProtKB/Swiss-Prot