Cct7 (chaperonin containing TCP1 subunit 7) - Rat Genome Database

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Gene: Cct7 (chaperonin containing TCP1 subunit 7) Mus musculus
Analyze
Symbol: Cct7
Name: chaperonin containing TCP1 subunit 7
RGD ID: 1315028
MGI Page MGI
Description: Predicted to enable protein folding chaperone and unfolded protein binding activity. Acts upstream of or within binding activity of sperm to zona pellucida. Located in cell body. Part of chaperonin-containing T-complex. Orthologous to human CCT7 (chaperonin containing TCP1 subunit 7).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AA408524; AL022769; CCT-eta; Ccth; Cctz; chaperonin containing t-complex subunit eta; chaperonin containing Tcp1, subunit 7 (eta); chaperonin subunit 7 (eta); T-complex protein 1 subunit eta; TCP-1-eta
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm12180   Gm19260   Gm20587   Gm20952   Gm3131   Gm5234   Gm5380  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39685,428,487 - 85,445,459 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl685,428,496 - 85,445,457 (+)EnsemblGRCm39 Ensembl
GRCm38685,451,505 - 85,468,477 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl685,451,514 - 85,468,475 (+)EnsemblGRCm38mm10GRCm38
MGSCv37685,401,499 - 85,418,471 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36685,417,731 - 85,434,130 (+)NCBIMGSCv36mm8
Celera687,423,447 - 87,440,419 (+)NCBICelera
Cytogenetic Map6C3NCBI
cM Map637.46NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (EXP,ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP)
1H-pyrazole  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,4-dinitrotoluene  (ISO)
2,6-dimethoxyphenol  (ISO)
2,6-dinitrotoluene  (ISO)
2-methylcholine  (ISO)
3',5'-cyclic GMP  (ISO)
3H-1,2-dithiole-3-thione  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
aminoglutethimide  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzatropine  (ISO)
benzo[a]pyrene  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
C60 fullerene  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
choline  (EXP)
chromium(6+)  (EXP)
clobetasol  (EXP)
clozapine  (ISO)
coumarin  (ISO)
cyclophosphamide  (ISO)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP)
diethylstilbestrol  (ISO)
dinophysistoxin 1  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
flutamide  (ISO)
folic acid  (EXP)
furfural  (ISO)
gentamycin  (ISO)
hydralazine  (ISO)
ivermectin  (ISO)
L-methionine  (EXP)
L-serine  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methidathion  (EXP)
nefazodone  (ISO)
nickel dichloride  (ISO)
nimesulide  (ISO)
okadaic acid  (ISO)
ozone  (EXP,ISO)
paracetamol  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
phenobarbital  (EXP)
PhIP  (ISO)
phlorizin  (EXP)
pirinixic acid  (EXP)
S-nitrosoglutathione  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (ISO)
sodium chloride  (ISO)
sodium dichromate  (EXP,ISO)
tamoxifen  (EXP,ISO)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
tolcapone  (ISO)
tributylstannane  (ISO)
trimellitic anhydride  (EXP)
triptonide  (EXP)
valdecoxib  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
WIN 55212-2  (EXP)
zinc atom  (ISO)
zinc(0)  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Identification of six Tcp-1-related genes encoding divergent subunits of the TCP-1-containing chaperonin. Kubota H, etal., Curr Biol 1994 Feb 1;4(2):89-99.
3. The chaperonin containing t-complex polypeptide 1 (TCP-1). Multisubunit machinery assisting in protein folding and assembly in the eukaryotic cytosol. Kubota H, etal., Eur J Biochem 1995 May 15;230(1):3-16.
4. Structures and co-regulated expression of the genes encoding mouse cytosolic chaperonin CCT subunits. Kubota H, etal., Eur J Biochem 1999 Jun;262(2):492-500.
5. MGDs mouse GO annotations MGD data from the GO Consortium
6. axl, a transforming gene isolated from primary human myeloid leukemia cells, encodes a novel receptor tyrosine kinase. O'Bryan JP, etal., Mol Cell Biol 1991 Oct;11(10):5016-31.
7. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7671812   PMID:7828721   PMID:9250675   PMID:9918813   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11532003   PMID:11591653   PMID:12477932  
PMID:12520002   PMID:12904583   PMID:14610273   PMID:15347653   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:18307411   PMID:18614015   PMID:18799693   PMID:20360068  
PMID:21267068   PMID:21677750   PMID:21873635   PMID:21880732   PMID:22083510   PMID:22673621   PMID:22794259   PMID:23665500   PMID:23716698   PMID:24457600   PMID:25755282   PMID:25921334  
PMID:26496610   PMID:28378742   PMID:30196744   PMID:30333137   PMID:30457570   PMID:30562941   PMID:30713523   PMID:31040226   PMID:32325033   PMID:32554809   PMID:33230847   PMID:36114006  
PMID:36293380   PMID:36417873   PMID:36808153   PMID:37142655   PMID:38355793  


Genomics

Comparative Map Data
Cct7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39685,428,487 - 85,445,459 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl685,428,496 - 85,445,457 (+)EnsemblGRCm39 Ensembl
GRCm38685,451,505 - 85,468,477 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl685,451,514 - 85,468,475 (+)EnsemblGRCm38mm10GRCm38
MGSCv37685,401,499 - 85,418,471 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36685,417,731 - 85,434,130 (+)NCBIMGSCv36mm8
Celera687,423,447 - 87,440,419 (+)NCBICelera
Cytogenetic Map6C3NCBI
cM Map637.46NCBI
CCT7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38273,234,308 - 73,253,005 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl273,233,420 - 73,253,021 (+)EnsemblGRCh38hg38GRCh38
GRCh37273,461,436 - 73,480,133 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36273,314,913 - 73,333,655 (+)NCBINCBI36Build 36hg18NCBI36
Build 34273,373,059 - 73,391,799NCBI
Celera273,312,190 - 73,330,978 (+)NCBICelera
Cytogenetic Map2p13.2NCBI
HuRef273,197,020 - 73,215,809 (+)NCBIHuRef
CHM1_1273,392,171 - 73,410,957 (+)NCBICHM1_1
T2T-CHM13v2.0273,246,421 - 73,265,996 (+)NCBIT2T-CHM13v2.0
Cct7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84119,546,730 - 119,563,973 (+)NCBIGRCr8
mRatBN7.24117,989,232 - 118,006,478 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4117,989,232 - 118,006,580 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4123,470,600 - 123,487,845 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04119,245,704 - 119,262,950 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04117,859,060 - 117,876,423 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04117,235,023 - 117,252,265 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4117,235,023 - 117,252,265 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04181,812,638 - 181,829,880 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44119,706,130 - 119,722,975 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14119,950,230 - 119,967,453 (+)NCBI
Celera4106,971,267 - 106,988,502 (+)NCBICelera
Cytogenetic Map4q34NCBI
Cct7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542412,379,222 - 12,402,161 (-)NCBIChiLan1.0ChiLan1.0
CCT7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21253,127,734 - 53,146,483 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A53,130,467 - 53,149,233 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A73,287,026 - 73,305,792 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A74,775,781 - 74,794,515 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A74,775,781 - 74,794,515 (+)Ensemblpanpan1.1panPan2
LOC100856782
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13437,026,053 - 37,027,839 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3446,037,678 - 46,039,504 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03437,111,520 - 37,113,356 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1750,442,388 - 50,498,676 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13437,048,532 - 37,050,353 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03437,018,069 - 37,019,859 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03437,275,388 - 37,277,179 (-)NCBIUU_Cfam_GSD_1.0
Cct7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629211,537,766 - 11,553,865 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649117,017,687 - 17,033,855 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649117,017,687 - 17,033,526 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CCT7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl369,526,534 - 69,546,548 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1369,527,238 - 69,540,489 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2372,730,662 - 72,743,914 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CCT7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11433,921,100 - 33,940,204 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1433,921,247 - 33,939,404 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604578,143,260 - 78,161,620 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cct7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624762387,712 - 410,196 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cct7
540 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:103
Count of miRNA genes:101
Interacting mature miRNAs:102
Transcripts:ENSMUST00000032078
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396633110Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671958006105958152Mouse
14697704Stsl4_mSalmonella typhimurium susceptibility locus 4 (mouse)67707698389976982Mouse
10412119Stv_mstriatal volumne (mouse)Not determined660026991100026967Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671958006105958152Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67797698396976961Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648696934125336963Mouse
12792979Fbmd2_mfemoral bone mineral density 2, females only (mouse)675026989115026943Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67552133992584431Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396633110Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67552133994202936Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65842456692424693Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671552042105552160Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67129960593441074Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64529099387403016Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648703490125333748Mouse
4141990Etax6_methanol induced ataxia 6 (mouse)Not determined7129960586252701Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5435041188356155Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675424566104480516Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65851741692517416Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487403016Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63864656092584431Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645290993128811995Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684099474118099474Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675584287109584431Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396633110Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670402880104403016Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396633110Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652138693116132228Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670402880104403016Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676440930110441074Mouse
15039373Adip28_madiposity 28 (mouse)65628519490285194Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65628519490285194Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66346172197461888Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675693484109693678Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666690851100691013Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670402880104403016Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681476981102176961Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673476983134676963Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67552133994202936Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66003466394034782Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678606487121092347Mouse

Markers in Region
RH124723  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38685,468,263 - 85,468,344UniSTSGRCm38
MGSCv37685,418,257 - 85,418,338UniSTSGRCm37
Celera687,440,205 - 87,440,286UniSTS
Cytogenetic Map6D1UniSTS
RH125529  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38685,467,087 - 85,467,642UniSTSGRCm38
MGSCv37685,417,081 - 85,417,636UniSTSGRCm37
Celera687,439,029 - 87,439,584UniSTS
Cytogenetic Map6D1UniSTS
UniSTS:235479  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38685,455,666 - 85,455,748UniSTSGRCm38
MGSCv37685,405,660 - 85,405,742UniSTSGRCm37
Celera687,427,608 - 87,427,690UniSTS
Cytogenetic Map6D1UniSTS
UniSTS:235482  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38685,467,743 - 85,468,216UniSTSGRCm38
MGSCv37685,417,737 - 85,418,210UniSTSGRCm37
Celera687,439,685 - 87,440,158UniSTS
Cytogenetic Map6D1UniSTS
CCT7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38685,466,011 - 85,466,651UniSTSGRCm38
MGSCv37685,416,005 - 85,416,645UniSTSGRCm37
Celera687,437,953 - 87,438,593UniSTS
Cytogenetic Map6D1UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_007638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB022160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC155728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ951185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR354750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z31399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000032078   ⟹   ENSMUSP00000032078
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl685,428,496 - 85,445,457 (+)Ensembl
GRCm38.p6 Ensembl685,451,514 - 85,468,475 (+)Ensembl
Ensembl Acc Id: ENSMUST00000204489   ⟹   ENSMUSP00000144919
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl685,429,034 - 85,445,264 (+)Ensembl
GRCm38.p6 Ensembl685,452,052 - 85,468,282 (+)Ensembl
Ensembl Acc Id: ENSMUST00000204592   ⟹   ENSMUSP00000144893
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl685,429,074 - 85,445,264 (+)Ensembl
GRCm38.p6 Ensembl685,452,092 - 85,468,282 (+)Ensembl
Ensembl Acc Id: ENSMUST00000204612   ⟹   ENSMUSP00000144701
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl685,439,134 - 85,443,070 (+)Ensembl
GRCm38.p6 Ensembl685,462,152 - 85,466,088 (+)Ensembl
Ensembl Acc Id: ENSMUST00000205094
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl685,429,001 - 85,432,884 (+)Ensembl
GRCm38.p6 Ensembl685,452,019 - 85,455,902 (+)Ensembl
Ensembl Acc Id: ENSMUST00000205096
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl685,437,720 - 85,441,892 (+)Ensembl
GRCm38.p6 Ensembl685,460,738 - 85,464,910 (+)Ensembl
Ensembl Acc Id: ENSMUST00000205143
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl685,438,753 - 85,442,919 (+)Ensembl
GRCm38.p6 Ensembl685,461,771 - 85,465,937 (+)Ensembl
RefSeq Acc Id: NM_007638   ⟹   NP_031664
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39685,428,487 - 85,445,459 (+)NCBI
GRCm38685,451,505 - 85,468,477 (+)ENTREZGENE
MGSCv37685,401,499 - 85,418,471 (+)RGD
Celera687,423,447 - 87,440,419 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_031664   ⟸   NM_007638
- UniProtKB: P80313 (UniProtKB/Swiss-Prot),   Q3TIJ7 (UniProtKB/TrEMBL),   Q3TET0 (UniProtKB/TrEMBL),   Q3THH8 (UniProtKB/TrEMBL),   Q3TJN2 (UniProtKB/TrEMBL),   Q8C5Q5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000032078   ⟸   ENSMUST00000032078
Ensembl Acc Id: ENSMUSP00000144893   ⟸   ENSMUST00000204592
Ensembl Acc Id: ENSMUSP00000144701   ⟸   ENSMUST00000204612
Ensembl Acc Id: ENSMUSP00000144919   ⟸   ENSMUST00000204489

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P80313-F1-model_v2 AlphaFold P80313 1-544 view protein structure

Promoters
RGD ID:6838901
Promoter ID:MM_KWN:46685
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   Spleen
Transcripts:NM_007638,   UC009CPU.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36685,401,516 - 85,402,082 (+)MPROMDB
RGD ID:6890228
Promoter ID:EPDNEW_M8565
Type:multiple initiation site
Name:Cct7_2
Description:Mus musculus chaperonin containing Tcp1, subunit 7 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8567  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38685,451,496 - 85,451,556EPDNEW
RGD ID:6890232
Promoter ID:EPDNEW_M8567
Type:initiation region
Name:Cct7_1
Description:Mus musculus chaperonin containing Tcp1, subunit 7 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8565  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38685,452,019 - 85,452,079EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:107184 AgrOrtholog
Ensembl Genes ENSMUSG00000030007 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000032078 ENTREZGENE
  ENSMUST00000032078.9 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.560.10 UniProtKB/Swiss-Prot
  3.30.260.10 UniProtKB/Swiss-Prot
  3.50.7.10 UniProtKB/Swiss-Prot
InterPro Chap_CCT_eta UniProtKB/Swiss-Prot
  Chaperone_TCP-1 UniProtKB/Swiss-Prot
  Chaperonin_TCP-1_CS UniProtKB/Swiss-Prot
  Cpn60/TCP-1 UniProtKB/Swiss-Prot
  GroEL-like_apical_dom_sf UniProtKB/Swiss-Prot
  GROEL-like_equatorial_sf UniProtKB/Swiss-Prot
  TCP-1-like_intermed_sf UniProtKB/Swiss-Prot
  TCP-1_chaperonin UniProtKB/Swiss-Prot
  thermosome_alpha UniProtKB/Swiss-Prot
KEGG Report mmu:12468 UniProtKB/Swiss-Prot
MGD MGI:107184 ENTREZGENE
NCBI Gene 12468 ENTREZGENE
PANTHER PTHR11353 UniProtKB/Swiss-Prot
Pfam Cpn60_TCP1 UniProtKB/Swiss-Prot
PhenoGen Cct7 PhenoGen
PRINTS TCOMPLEXTCP1 UniProtKB/Swiss-Prot
PROSITE TCP1_1 UniProtKB/Swiss-Prot
  TCP1_2 UniProtKB/Swiss-Prot
  TCP1_3 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48592 UniProtKB/Swiss-Prot
  SSF52029 UniProtKB/Swiss-Prot
  SSF54849 UniProtKB/Swiss-Prot
UniProt A0A0N4SUI8_MOUSE UniProtKB/TrEMBL
  A0A0N4SV00_MOUSE UniProtKB/TrEMBL
  A0A0N4SV22_MOUSE UniProtKB/TrEMBL
  P80313 ENTREZGENE
  Q3TET0 ENTREZGENE, UniProtKB/TrEMBL
  Q3THH8 ENTREZGENE, UniProtKB/TrEMBL
  Q3TIJ7 ENTREZGENE, UniProtKB/TrEMBL
  Q3TJN2 ENTREZGENE, UniProtKB/TrEMBL
  Q3UDB1_MOUSE UniProtKB/TrEMBL
  Q3UIJ0_MOUSE UniProtKB/TrEMBL
  Q8C5Q5 ENTREZGENE, UniProtKB/TrEMBL
  TCPH_MOUSE UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-07-04 Cct7  chaperonin containing TCP1 subunit 7  Cct7  chaperonin containing Tcp1, subunit 7 (eta)  Symbol and/or name change 5135510 APPROVED