Mrpl3 (mitochondrial ribosomal protein L3) - Rat Genome Database

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Gene: Mrpl3 (mitochondrial ribosomal protein L3) Mus musculus
Analyze
Symbol: Mrpl3
Name: mitochondrial ribosomal protein L3
RGD ID: 1314982
MGI Page MGI
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to act upstream of or within translation. Located in mitochondrion. Is expressed in several structures, including early conceptus; genitourinary system; liver; lung; and spleen. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 9. Orthologous to human MRPL3 (mitochondrial ribosomal protein L3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2010320L16Rik; 39S ribosomal protein L3, mitochondrial; 5930422H18Rik; AA407889; dc; dcr; L3mt; large ribosomal subunit protein uL3m; MRP-L3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399104,930,394 - 104,954,665 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9104,930,438 - 104,957,087 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm389105,053,268 - 105,077,466 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9105,053,239 - 105,079,888 (+)Ensemblmm10GRCm38
MGSCv379104,955,598 - 104,979,806 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv369104,911,368 - 104,935,576 (+)NCBIMGSCv36mm8
Celera9104,636,794 - 104,660,876 (+)NCBICelera
Cytogenetic Map9F1NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. Mootha VK, etal., Cell 2003 Nov 26;115(5):629-40.
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Structural compensation for the deficit of rRNA with proteins in the mammalian mitochondrial ribosome. Systematic analysis of protein components of the large ribosomal subunit from mammalian mitochondria. Suzuki T, etal., J Biol Chem 2001 Jun 15;276(24):21724-36. Epub 2001 Feb 21.
Additional References at PubMed
PMID:7671812   PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:18614015  
PMID:18799693   PMID:20305823   PMID:21217823   PMID:21677750   PMID:21873635   PMID:22904065   PMID:25278503   PMID:27023846   PMID:29222160   PMID:32325033   PMID:32341096   PMID:32376682  
PMID:32987154   PMID:36417873   PMID:38355793  


Genomics

Comparative Map Data
Mrpl3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399104,930,394 - 104,954,665 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9104,930,438 - 104,957,087 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm389105,053,268 - 105,077,466 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9105,053,239 - 105,079,888 (+)Ensemblmm10GRCm38
MGSCv379104,955,598 - 104,979,806 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv369104,911,368 - 104,935,576 (+)NCBIMGSCv36mm8
Celera9104,636,794 - 104,660,876 (+)NCBICelera
Cytogenetic Map9F1NCBI
MRPL3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383131,462,212 - 131,502,971 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3131,462,202 - 131,502,983 (-)Ensemblhg38GRCh38
GRCh373131,181,056 - 131,221,815 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363132,663,735 - 132,704,519 (-)NCBIBuild 36Build 36hg18NCBI36
Build 343132,663,743 - 132,704,527NCBI
Celera3129,607,070 - 129,647,849 (-)NCBICelera
Cytogenetic Map3q22.1NCBI
HuRef3128,565,870 - 128,606,668 (-)NCBIHuRef
CHM1_13131,144,467 - 131,185,286 (-)NCBICHM1_1
T2T-CHM13v2.03134,205,979 - 134,246,719 (-)NCBIT2T-CHM13v2.0
Mrpl3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88114,548,970 - 114,572,330 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8114,548,970 - 114,573,996 (+)EnsemblGRCr8
mRatBN7.28105,670,184 - 105,693,544 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8105,670,184 - 105,693,544 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8111,314,205 - 111,337,734 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08109,513,461 - 109,536,992 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08107,356,137 - 107,379,666 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.08113,603,533 - 113,626,893 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8113,603,533 - 113,626,893 (+)Ensemblrn6Rnor6.0
Rnor_5.08112,989,706 - 113,013,066 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48110,130,050 - 110,153,411 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8105,026,780 - 105,050,130 (+)NCBICelera
RGSC_v3.18110,134,314 - 110,172,765 (+)NCBI
Cytogenetic Map8q32NCBI
Mrpl3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555016,961,791 - 7,005,973 (+)Ensembl
ChiLan1.0NW_0049555016,961,845 - 7,002,181 (+)NCBIChiLan1.0ChiLan1.0
MRPL3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22129,421,232 - 129,486,128 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13129,425,959 - 129,490,856 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03128,544,224 - 128,609,045 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13135,866,397 - 135,907,043 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3135,866,397 - 135,907,043 (-)EnsemblpanPan2panpan1.1
MRPL3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12328,566,318 - 28,605,483 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2328,563,757 - 28,605,460 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2328,540,840 - 28,580,439 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02329,073,912 - 29,113,510 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2329,073,915 - 29,113,476 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12328,769,346 - 28,808,674 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02328,830,800 - 28,870,377 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02329,080,606 - 29,119,968 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Mrpl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560268,098,541 - 68,164,600 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365294,884,009 - 4,925,114 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365294,884,795 - 4,925,093 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MRPL3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13984,910 - 1,024,507 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.113984,985 - 1,024,185 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213763,826 - 803,028 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MRPL3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11558,732,262 - 58,772,638 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1558,732,268 - 58,772,538 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604131,739,833 - 31,780,666 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mrpl3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247307,470,590 - 7,510,028 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247307,470,673 - 7,509,922 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Mrpl3
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1896,353,199 - 96,375,720 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Mrpl3
1121 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:1019
Count of miRNA genes:564
Interacting mature miRNAs:670
Transcripts:ENSMUST00000035177, ENSMUST00000131655, ENSMUST00000139022, ENSMUST00000142424, ENSMUST00000149243
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982792386116792481Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989440541123440541Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989289476123289595Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982792386116792481Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985779563108518385Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976417989110418183Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103118511124359700Mouse
14746992Manh67_mmandible shape 67 (mouse)993865836124359700Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103118511124359700Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975682646114303447Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9100889929124359700Mouse
10054068El8_mepilepsy 8 (mouse)Not determined972859058106859205Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991560372124359700Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986625682120625682Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9101829255124359700Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63239711120191934Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991560372124359700Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979279863113279941Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986121898120118690Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9101829255124359700Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975682646114303447Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991560372124359700Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989162124123162124Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989859058118767089Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974250230108250378Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982792386116792481Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63239711120191934Mouse
1301573Etohcta8_methanol conditioned taste aversion 8 (mouse)Not determined972859058106859205Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986107600120107729Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963239711120191934Mouse
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959897283109089068Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978522698112522808Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103118511124359700Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987677199121677199Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993591658124359700Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996746658124359700Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994863354112701997Mouse
12910773Splic3_mspleen iron content 3 (mouse)991291078124359700Mouse
12910772Lvic6_mliver iron content 6 (mouse)991291078124359700Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991518283124359700Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981680321115680445Mouse
12910770Splic1_mspleen iron content 1 (mouse)991291078124359700Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991518283124359700Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991518283124359700Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991518283124359700Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984406017118406120Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991518283124359700Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991518283124359700Mouse
1301484Bwq6_mbody weight (mouse)Not determined993591658124359700Mouse

Markers in Region
RH124645  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389105,077,262 - 105,077,377UniSTSGRCm38
MGSCv379104,979,592 - 104,979,707UniSTSGRCm37
Cytogenetic Map9F1UniSTS
RH125376  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389105,062,252 - 105,062,445UniSTSGRCm38
MGSCv379104,964,582 - 104,964,775UniSTSGRCm37
Celera9104,645,566 - 104,645,759UniSTS
Cytogenetic Map9F1UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001364512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_053159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB049633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC117688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC011128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC016586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC508086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000035177   ⟹   ENSMUSP00000035177
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9104,930,438 - 104,957,087 (+)Ensembl
GRCm38.p6 Ensembl9105,053,239 - 105,079,888 (+)Ensembl
Ensembl Acc Id: ENSMUST00000131655   ⟹   ENSMUSP00000120313
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9104,930,496 - 104,939,335 (+)Ensembl
GRCm38.p6 Ensembl9105,053,297 - 105,062,136 (+)Ensembl
Ensembl Acc Id: ENSMUST00000139022
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9104,948,058 - 104,951,316 (+)Ensembl
GRCm38.p6 Ensembl9105,070,859 - 105,074,117 (+)Ensembl
Ensembl Acc Id: ENSMUST00000142424   ⟹   ENSMUSP00000120828
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9104,930,500 - 104,954,665 (+)Ensembl
GRCm38.p6 Ensembl9105,053,301 - 105,077,466 (+)Ensembl
Ensembl Acc Id: ENSMUST00000149243   ⟹   ENSMUSP00000117547
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9104,930,438 - 104,953,671 (+)Ensembl
GRCm38.p6 Ensembl9105,053,239 - 105,076,472 (+)Ensembl
Ensembl Acc Id: ENSMUST00000190492   ⟹   ENSMUSP00000140346
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9104,930,469 - 104,932,826 (+)Ensembl
GRCm38.p6 Ensembl9105,053,270 - 105,055,627 (+)Ensembl
Ensembl Acc Id: ENSMUST00000214036   ⟹   ENSMUSP00000150592
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9104,930,469 - 104,934,289 (+)Ensembl
GRCm38.p6 Ensembl9105,053,270 - 105,057,090 (+)Ensembl
Ensembl Acc Id: ENSMUST00000214459
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9104,940,965 - 104,954,553 (+)Ensembl
GRCm38.p6 Ensembl9105,063,766 - 105,077,354 (+)Ensembl
Ensembl Acc Id: ENSMUST00000215577
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9104,942,004 - 104,954,683 (+)Ensembl
GRCm38.p6 Ensembl9105,064,805 - 105,077,484 (+)Ensembl
RefSeq Acc Id: NM_001364512   ⟹   NP_001351441
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399104,930,467 - 104,954,665 (+)NCBI
GRCm389105,053,268 - 105,077,466 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001364513   ⟹   NP_001351442
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399104,930,467 - 104,953,666 (+)NCBI
GRCm389105,053,268 - 105,076,467 (+)NCBI
Sequence:
RefSeq Acc Id: NM_053159   ⟹   NP_444389
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399104,930,467 - 104,954,665 (+)NCBI
GRCm389105,053,268 - 105,077,466 (+)NCBI
MGSCv379104,955,598 - 104,979,806 (+)RGD
Celera9104,636,794 - 104,660,876 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036155424   ⟹   XP_036011317
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399104,930,394 - 104,948,082 (+)NCBI
Sequence:
RefSeq Acc Id: NP_444389   ⟸   NM_053159
- Peptide Label: isoform 1
- UniProtKB: Q3TF66 (UniProtKB/Swiss-Prot),   Q9CVE4 (UniProtKB/Swiss-Prot),   Q99N95 (UniProtKB/Swiss-Prot),   Q91XB2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001351441   ⟸   NM_001364512
- Peptide Label: isoform 2
- UniProtKB: Q05DC5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001351442   ⟸   NM_001364513
- Peptide Label: isoform 3
- UniProtKB: D3Z456 (UniProtKB/TrEMBL),   Q91XB2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000035177   ⟸   ENSMUST00000035177
Ensembl Acc Id: ENSMUSP00000120313   ⟸   ENSMUST00000131655
Ensembl Acc Id: ENSMUSP00000140346   ⟸   ENSMUST00000190492
Ensembl Acc Id: ENSMUSP00000117547   ⟸   ENSMUST00000149243
Ensembl Acc Id: ENSMUSP00000120828   ⟸   ENSMUST00000142424
Ensembl Acc Id: ENSMUSP00000150592   ⟸   ENSMUST00000214036
RefSeq Acc Id: XP_036011317   ⟸   XM_036155424
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99N95-F1-model_v2 AlphaFold Q99N95 1-348 view protein structure

Promoters
RGD ID:6844820
Promoter ID:MM_KWN:58613
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000057317,   OTTMUST00000057319,   UC009RHU.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369104,955,366 - 104,955,866 (+)MPROMDB
RGD ID:6844821
Promoter ID:MM_KWN:58614
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2
Transcripts:OTTMUST00000057496
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369104,956,031 - 104,956,531 (+)MPROMDB
RGD ID:8670672
Promoter ID:EPDNEW_M13367
Type:initiation region
Name:Mrpl3_1
Description:Mus musculus mitochondrial ribosomal protein L3 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389105,053,288 - 105,053,348EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2137204 AgrOrtholog
Ensembl Genes ENSMUSG00000032563 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000035177 ENTREZGENE
  ENSMUST00000035177.15 UniProtKB/Swiss-Prot
  ENSMUST00000149243 ENTREZGENE
Gene3D-CATH Translation factors UniProtKB/Swiss-Prot
InterPro Ribosomal_L3 UniProtKB/Swiss-Prot
  Ribosomal_L3_bac/org-type UniProtKB/Swiss-Prot
  Ribosomal_L3_CS UniProtKB/Swiss-Prot
  Transl_B-barrel_sf UniProtKB/Swiss-Prot
KEGG Report mmu:94062 UniProtKB/Swiss-Prot
MGD MGI:2137204 ENTREZGENE
NCBI Gene 94062 ENTREZGENE
PANTHER 39S RIBOSOMAL PROTEIN L3, MITOCHONDRIAL UniProtKB/Swiss-Prot
  PTHR11229 UniProtKB/Swiss-Prot
Pfam Ribosomal_L3 UniProtKB/Swiss-Prot
PhenoGen Mrpl3 PhenoGen
PROSITE RIBOSOMAL_L3 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF50447 UniProtKB/Swiss-Prot
UniProt A0A087WQU4_MOUSE UniProtKB/TrEMBL
  A0A1L1SU47_MOUSE UniProtKB/TrEMBL
  D3Z456 ENTREZGENE, UniProtKB/TrEMBL
  D6RI16_MOUSE UniProtKB/TrEMBL
  F6W7C7_MOUSE UniProtKB/TrEMBL
  Q05DC5 ENTREZGENE, UniProtKB/TrEMBL
  Q3TF66 ENTREZGENE
  Q8BTD7_MOUSE UniProtKB/TrEMBL
  Q91XB2 ENTREZGENE, UniProtKB/TrEMBL
  Q99N95 ENTREZGENE
  Q9CVE4 ENTREZGENE
  RM03_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q3TF66 UniProtKB/Swiss-Prot
  Q9CVE4 UniProtKB/Swiss-Prot