ZNF629 (zinc finger protein 629) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: ZNF629 (zinc finger protein 629) Homo sapiens
Analyze
Symbol: ZNF629
Name: zinc finger protein 629
RGD ID: 1314773
HGNC Page HGNC:29008
Description: Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: DNA-binding protein; KIAA0326; zinc finger protein 65; ZNF; ZNF65
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381630,778,456 - 30,787,205 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1630,778,456 - 30,787,205 (-)EnsemblGRCh38hg38GRCh38
GRCh371630,789,777 - 30,798,526 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361630,697,271 - 30,706,024 (-)NCBINCBI36Build 36hg18NCBI36
Celera1629,498,892 - 29,507,651 (+)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1628,352,601 - 28,361,366 (-)NCBIHuRef
CHM1_11632,106,931 - 32,115,684 (-)NCBICHM1_1
T2T-CHM13v2.01631,165,899 - 31,174,664 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IBA,IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1505991   PMID:1946370   PMID:9205841   PMID:12477932   PMID:18029348   PMID:21873635   PMID:23449627   PMID:25281560   PMID:25921289   PMID:26186194   PMID:26496610   PMID:28514442  
PMID:28695742   PMID:29180619   PMID:29395067   PMID:29507755   PMID:29802200   PMID:29844126   PMID:30209976   PMID:30804502   PMID:31091453   PMID:31753913   PMID:32239614   PMID:32296183  
PMID:32694731   PMID:32807901   PMID:32891193   PMID:33961781   PMID:34079125   PMID:34189442   PMID:34244482   PMID:35013218   PMID:35140242   PMID:35271311   PMID:35563538   PMID:35850772  
PMID:35915203   PMID:35944360   PMID:36168627   PMID:36232890   PMID:36537216   PMID:36931259   PMID:37059091   PMID:37267103   PMID:38580884   PMID:38697112   PMID:38777146  


Genomics

Comparative Map Data
ZNF629
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381630,778,456 - 30,787,205 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1630,778,456 - 30,787,205 (-)EnsemblGRCh38hg38GRCh38
GRCh371630,789,777 - 30,798,526 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361630,697,271 - 30,706,024 (-)NCBINCBI36Build 36hg18NCBI36
Celera1629,498,892 - 29,507,651 (+)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1628,352,601 - 28,361,366 (-)NCBIHuRef
CHM1_11632,106,931 - 32,115,684 (-)NCBICHM1_1
T2T-CHM13v2.01631,165,899 - 31,174,664 (-)NCBIT2T-CHM13v2.0
Zfp629
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397127,206,203 - 127,215,053 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7127,206,203 - 127,214,969 (-)EnsemblGRCm39 Ensembl
GRCm387127,607,028 - 127,615,785 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,607,031 - 127,615,797 (-)EnsemblGRCm38mm10GRCm38
MGSCv377134,750,549 - 134,757,947 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367127,398,183 - 127,405,581 (-)NCBIMGSCv36mm8
Celera7127,451,941 - 127,459,339 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.62NCBI
Zfp629
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81191,648,753 - 191,689,082 (-)NCBIGRCr8
mRatBN7.21182,217,499 - 182,258,585 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1182,210,935 - 182,230,016 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1190,571,588 - 190,579,791 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01197,757,670 - 197,765,873 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01190,428,176 - 190,436,379 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01199,052,430 - 199,065,639 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,894,000 - 199,064,150 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01206,075,838 - 206,117,168 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41186,894,514 - 186,902,921 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11187,046,159 - 187,052,621 (-)NCBI
Celera1179,872,825 - 179,881,028 (-)NCBICelera
Cytogenetic Map1q37NCBI
Znf629
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554937,641,141 - 7,649,927 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554937,641,141 - 7,649,927 (-)NCBIChiLan1.0ChiLan1.0
ZNF629
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21833,983,862 - 33,996,078 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11638,785,321 - 38,797,534 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01624,181,152 - 24,191,053 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11631,145,520 - 31,154,196 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1631,145,520 - 31,154,196 (-)Ensemblpanpan1.1panPan2
ZNF629
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1617,371,716 - 17,398,895 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl617,340,326 - 17,395,541 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha618,965,612 - 18,973,899 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0617,447,764 - 17,530,691 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl617,502,739 - 17,530,683 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1617,248,092 - 17,330,971 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0617,167,210 - 17,248,671 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0617,479,756 - 17,561,472 (+)NCBIUU_Cfam_GSD_1.0
Znf629
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344125,072,686 - 125,101,039 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650113,170,571 - 13,179,297 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650113,170,546 - 13,179,299 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF629
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl317,610,293 - 17,618,999 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1317,610,100 - 17,622,577 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2318,056,249 - 18,068,098 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF629
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1527,466,199 - 27,476,063 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl527,466,162 - 27,472,607 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660682,000,324 - 2,009,155 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf629
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478213,902,342 - 13,905,944 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478213,899,232 - 13,906,736 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZNF629
39 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 16p11.2-11.1(chr16:30691912-36160463)x3 copy number gain See cases [RCV000133811] Chr16:30691912..36160463 [GRCh38]
Chr16:30703233..35147508 [GRCh37]
Chr16:30610734..35005009 [NCBI36]
Chr16:16p11.2-11.1
pathogenic
GRCh38/hg38 16p11.2(chr16:29909613-31438697)x3 copy number gain See cases [RCV000135339] Chr16:29909613..31438697 [GRCh38]
Chr16:29920934..31450018 [GRCh37]
Chr16:29828435..31357519 [NCBI36]
Chr16:16p11.2
pathogenic
GRCh38/hg38 16p12.1-11.2(chr16:27311746-31193406)x3 copy number gain See cases [RCV000140341] Chr16:27311746..31193406 [GRCh38]
Chr16:27323067..31204727 [GRCh37]
Chr16:27230568..31112228 [NCBI36]
Chr16:16p12.1-11.2
pathogenic
GRCh38/hg38 16p12.2-11.2(chr16:23752047-31943755)x3 copy number gain See cases [RCV000141141] Chr16:23752047..31943755 [GRCh38]
Chr16:23763368..31955076 [GRCh37]
Chr16:23670869..31862577 [NCBI36]
Chr16:16p12.2-11.2
pathogenic
GRCh37/hg19 16p11.2(chr16:30391304-31122666)x3 copy number gain Breast ductal adenocarcinoma [RCV000207028] Chr16:30391304..31122666 [GRCh37]
Chr16:16p11.2
uncertain significance
GRCh37/hg19 16p13.3-11.2(chr16:1279324-31926800)x3 copy number gain Breast ductal adenocarcinoma [RCV000207053] Chr16:1279324..31926800 [GRCh37]
Chr16:16p13.3-11.2
uncertain significance
NM_001080417.3(ZNF629):c.2596G>C (p.Gly866Arg) single nucleotide variant not specified [RCV004319800] Chr16:30781732 [GRCh38]
Chr16:30793053 [GRCh37]
Chr16:16p11.2
uncertain significance
Single allele deletion Branched-chain keto acid dehydrogenase kinase deficiency [RCV000735205] Chr16:30554158..31536880 [GRCh37]
Chr16:16p11.2
uncertain significance
GRCh37/hg19 16p13.3-q24.3(chr16:69193-90274381)x3 copy number gain See cases [RCV000446684] Chr16:69193..90274381 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p11.2(chr16:30515442-30792856)x1 copy number loss See cases [RCV000445894] Chr16:30515442..30792856 [GRCh37]
Chr16:16p11.2
uncertain significance
GRCh37/hg19 16p11.2(chr16:28826162-29043901)x1 copy number loss See cases [RCV000448084] Chr16:28826162..29043901 [GRCh37]
Chr16:16p11.2
likely pathogenic
GRCh37/hg19 16p11.2(chr16:30607048-31117069)x1 copy number loss See cases [RCV000511454] Chr16:30607048..31117069 [GRCh37]
Chr16:16p11.2
uncertain significance
GRCh37/hg19 16p13.2-q24.3(chr16:9273328-89548493)x3 copy number gain See cases [RCV000511622] Chr16:9273328..89548493 [GRCh37]
Chr16:16p13.2-q24.3
uncertain significance
maternal UPD(16p) complex Hemimegalencephaly [RCV000494707] Chr16:1280042..33710558 [GRCh37]
Chr16:16p13.3-11.2
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062) copy number gain See cases [RCV000511296] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062)x3 copy number gain See cases [RCV000512138] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90163275)x3 copy number gain not provided [RCV000738917] Chr16:88165..90163275 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90274695)x3 copy number gain not provided [RCV000738918] Chr16:88165..90274695 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:61451-90294632)x3 copy number gain not provided [RCV000738915] Chr16:61451..90294632 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p11.2(chr16:30738551-34194635)x3 copy number gain not provided [RCV000739123] Chr16:30738551..34194635 [GRCh37]
Chr16:16p11.2
benign
NM_001080417.3(ZNF629):c.175A>T (p.Thr59Ser) single nucleotide variant not provided [RCV000898594] Chr16:30784153 [GRCh38]
Chr16:30795474 [GRCh37]
Chr16:16p11.2
benign
NM_001080417.3(ZNF629):c.2480A>T (p.His827Leu) single nucleotide variant not provided [RCV000957403] Chr16:30781848 [GRCh38]
Chr16:30793169 [GRCh37]
Chr16:16p11.2
benign
NM_001080417.3(ZNF629):c.2306G>C (p.Arg769Pro) single nucleotide variant not specified [RCV004313838] Chr16:30782022 [GRCh38]
Chr16:30793343 [GRCh37]
Chr16:16p11.2
uncertain significance
GRCh37/hg19 16p13.3-11.2(chr16:5805001-34230001) copy number gain Microcephaly [RCV001252948] Chr16:5805001..34230001 [GRCh37]
Chr16:16p13.3-11.2
pathogenic
GRCh37/hg19 16p11.2(chr16:30350747-31905898)x3 copy number gain not provided [RCV001258619] Chr16:30350747..31905898 [GRCh37]
Chr16:16p11.2
uncertain significance
NC_000016.9:g.(?_30712146)_(31021717_?)dup duplication Generalized epilepsy with febrile seizures plus, type 9 [RCV003122990] Chr16:30712146..31021717 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.1321A>G (p.Met441Val) single nucleotide variant not specified [RCV004111639] Chr16:30783007 [GRCh38]
Chr16:30794328 [GRCh37]
Chr16:16p11.2
uncertain significance
GRCh37/hg19 16p11.2(chr16:30460206-30906733)x3 copy number gain not provided [RCV002475788] Chr16:30460206..30906733 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.1804G>A (p.Gly602Ser) single nucleotide variant not specified [RCV004143336] Chr16:30782524 [GRCh38]
Chr16:30793845 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.1668C>A (p.Asp556Glu) single nucleotide variant not specified [RCV004205187] Chr16:30782660 [GRCh38]
Chr16:30793981 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.2223C>G (p.Ser741Arg) single nucleotide variant not specified [RCV004193085] Chr16:30782105 [GRCh38]
Chr16:30793426 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.338G>C (p.Ser113Thr) single nucleotide variant not specified [RCV004083907] Chr16:30783990 [GRCh38]
Chr16:30795311 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.1805G>A (p.Gly602Asp) single nucleotide variant not specified [RCV004184329] Chr16:30782523 [GRCh38]
Chr16:30793844 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.2393C>T (p.Pro798Leu) single nucleotide variant not specified [RCV004211584] Chr16:30781935 [GRCh38]
Chr16:30793256 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.2455C>G (p.Pro819Ala) single nucleotide variant not specified [RCV004115819] Chr16:30781873 [GRCh38]
Chr16:30793194 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.2260G>T (p.Val754Phe) single nucleotide variant not specified [RCV004164104] Chr16:30782068 [GRCh38]
Chr16:30793389 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.2449G>A (p.Glu817Lys) single nucleotide variant not specified [RCV004190270] Chr16:30781879 [GRCh38]
Chr16:30793200 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.2548G>A (p.Gly850Ser) single nucleotide variant not specified [RCV004099594] Chr16:30781780 [GRCh38]
Chr16:30793101 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.113A>G (p.Glu38Gly) single nucleotide variant not specified [RCV004194288] Chr16:30784215 [GRCh38]
Chr16:30795536 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.292G>A (p.Glu98Lys) single nucleotide variant not specified [RCV004086564] Chr16:30784036 [GRCh38]
Chr16:30795357 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.1664G>C (p.Gly555Ala) single nucleotide variant not specified [RCV004267637] Chr16:30782664 [GRCh38]
Chr16:30793985 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.259G>C (p.Asp87His) single nucleotide variant not specified [RCV004253814] Chr16:30784069 [GRCh38]
Chr16:30795390 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.2338C>T (p.Arg780Cys) single nucleotide variant not specified [RCV004321539] Chr16:30781990 [GRCh38]
Chr16:30793311 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.1928C>T (p.Pro643Leu) single nucleotide variant not specified [RCV004365151] Chr16:30782400 [GRCh38]
Chr16:30793721 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.2131G>A (p.Gly711Arg) single nucleotide variant not specified [RCV004353026] Chr16:30782197 [GRCh38]
Chr16:30793518 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.1858C>G (p.Pro620Ala) single nucleotide variant not specified [RCV004361052] Chr16:30782470 [GRCh38]
Chr16:30793791 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.772G>A (p.Gly258Ser) single nucleotide variant not specified [RCV004359699] Chr16:30783556 [GRCh38]
Chr16:30794877 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.1924A>C (p.Lys642Gln) single nucleotide variant not specified [RCV004487184] Chr16:30782404 [GRCh38]
Chr16:30793725 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.2437G>A (p.Glu813Lys) single nucleotide variant not specified [RCV004487186] Chr16:30781891 [GRCh38]
Chr16:30793212 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.826G>A (p.Asp276Asn) single nucleotide variant not specified [RCV004487190] Chr16:30783502 [GRCh38]
Chr16:30794823 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.104C>A (p.Pro35His) single nucleotide variant not specified [RCV004487180] Chr16:30784224 [GRCh38]
Chr16:30795545 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.1229G>C (p.Ser410Thr) single nucleotide variant not specified [RCV004487181] Chr16:30783099 [GRCh38]
Chr16:30794420 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.2398G>T (p.Asp800Tyr) single nucleotide variant not specified [RCV004487185] Chr16:30781930 [GRCh38]
Chr16:30793251 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.326C>T (p.Ala109Val) single nucleotide variant not specified [RCV004487188] Chr16:30784002 [GRCh38]
Chr16:30795323 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.385C>T (p.Pro129Ser) single nucleotide variant not specified [RCV004487189] Chr16:30783943 [GRCh38]
Chr16:30795264 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.94G>A (p.Glu32Lys) single nucleotide variant not specified [RCV004487192] Chr16:30784234 [GRCh38]
Chr16:30795555 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.1634G>A (p.Arg545Lys) single nucleotide variant not specified [RCV004487182] Chr16:30782694 [GRCh38]
Chr16:30794015 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.1658G>T (p.Gly553Val) single nucleotide variant not specified [RCV004487183] Chr16:30782670 [GRCh38]
Chr16:30793991 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.877C>T (p.Pro293Ser) single nucleotide variant not specified [RCV004487191] Chr16:30783451 [GRCh38]
Chr16:30794772 [GRCh37]
Chr16:16p11.2
uncertain significance
NC_000016.9:g.(?_28889993)_(31202759_?)del deletion Dilated Cardiomyopathy, Dominant [RCV004582801] Chr16:28889993..31202759 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.2465C>A (p.Thr822Lys) single nucleotide variant not specified [RCV004600052] Chr16:30781863 [GRCh38]
Chr16:30793184 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.61G>T (p.Asp21Tyr) single nucleotide variant not specified [RCV004600054] Chr16:30784422 [GRCh38]
Chr16:30795743 [GRCh37]
Chr16:16p11.2
uncertain significance
NM_001080417.3(ZNF629):c.2284C>A (p.Pro762Thr) single nucleotide variant not specified [RCV004600051] Chr16:30782044 [GRCh38]
Chr16:30793365 [GRCh37]
Chr16:16p11.2
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1574
Count of miRNA genes:834
Interacting mature miRNAs:989
Transcripts:ENST00000262525
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH65007  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371630,791,273 - 30,791,393UniSTSGRCh37
Build 361630,698,774 - 30,698,894RGDNCBI36
Celera1629,506,028 - 29,506,148RGD
Cytogenetic Map16p11.2UniSTS
HuRef1628,354,104 - 28,354,224UniSTS
Cda1jd07  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371630,789,917 - 30,790,036UniSTSGRCh37
Build 361630,697,418 - 30,697,537RGDNCBI36
Celera1629,507,385 - 29,507,504RGD
Cytogenetic Map16p11.2UniSTS
HuRef1628,352,748 - 28,352,867UniSTS
SHGC-61072  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371630,789,793 - 30,790,071UniSTSGRCh37
Build 361630,697,294 - 30,697,572RGDNCBI36
Celera1629,507,350 - 29,507,628RGD
Cytogenetic Map16p11.2UniSTS
HuRef1628,352,624 - 28,352,902UniSTS
D16S3188  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371630,789,804 - 30,789,996UniSTSGRCh37
Build 361630,697,305 - 30,697,497RGDNCBI36
Celera1629,507,425 - 29,507,617RGD
Cytogenetic Map16p11.2UniSTS
HuRef1628,352,635 - 28,352,827UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2250 4973 1725 2350 6 623 1936 464 2269 7293 6460 53 3734 1 852 1744 1617 175 1

Sequence


Ensembl Acc Id: ENST00000262525   ⟹   ENSP00000262525
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1630,778,456 - 30,787,205 (-)Ensembl
RefSeq Acc Id: NM_001080417   ⟹   NP_001073886
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381630,778,456 - 30,787,205 (-)NCBI
GRCh371630,789,770 - 30,798,564 (-)NCBI
Build 361630,697,271 - 30,706,024 (-)NCBI Archive
Celera1629,498,892 - 29,507,651 (+)RGD
HuRef1628,352,601 - 28,361,366 (-)RGD
CHM1_11632,106,931 - 32,115,684 (-)NCBI
T2T-CHM13v2.01631,165,899 - 31,174,664 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001345970   ⟹   NP_001332899
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381630,778,456 - 30,787,205 (-)NCBI
T2T-CHM13v2.01631,165,899 - 31,174,664 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001073886 (Get FASTA)   NCBI Sequence Viewer  
  NP_001332899 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA61332 (Get FASTA)   NCBI Sequence Viewer  
  BAA20784 (Get FASTA)   NCBI Sequence Viewer  
  EAW52195 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000262525
  ENSP00000262525.4
GenBank Protein Q9UEG4 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001073886   ⟸   NM_001080417
- Peptide Label: isoform 1
- UniProtKB: Q15938 (UniProtKB/Swiss-Prot),   Q9UEG4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001332899   ⟸   NM_001345970
- Peptide Label: isoform 2
- UniProtKB: Q9UEG4 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSP00000262525   ⟸   ENST00000262525

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9UEG4-F1-model_v2 AlphaFold Q9UEG4 1-869 view protein structure

Promoters
RGD ID:6815125
Promoter ID:HG_MRA:6002
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:AK026115,   BC080594
Position:
Human AssemblyChrPosition (strand)Source
Build 361630,699,251 - 30,699,751 (-)MPROMDB
RGD ID:6793640
Promoter ID:HG_KWN:23572
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_001080417
Position:
Human AssemblyChrPosition (strand)Source
Build 361630,705,754 - 30,706,254 (-)MPROMDB
RGD ID:7232025
Promoter ID:EPDNEW_H21758
Type:initiation region
Name:ZNF629_1
Description:zinc finger protein 629
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H21759  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381630,787,188 - 30,787,248EPDNEW
RGD ID:7232027
Promoter ID:EPDNEW_H21759
Type:initiation region
Name:ZNF629_2
Description:zinc finger protein 629
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H21758  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381630,787,454 - 30,787,514EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:29008 AgrOrtholog
COSMIC ZNF629 COSMIC
Ensembl Genes ENSG00000102870 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000262525 ENTREZGENE
  ENST00000262525.6 UniProtKB/Swiss-Prot
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot
GTEx ENSG00000102870 GTEx
HGNC ID HGNC:29008 ENTREZGENE
Human Proteome Map ZNF629 Human Proteome Map
InterPro Znf_C2H2_sf UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
KEGG Report hsa:23361 UniProtKB/Swiss-Prot
NCBI Gene 23361 ENTREZGENE
OMIM 619587 OMIM
PANTHER ZINC FINGER AND SCAN DOMAIN-CONTAINING UniProtKB/Swiss-Prot
  ZINC FINGER PROTEIN 983 UniProtKB/Swiss-Prot
Pfam zf-C2H2 UniProtKB/Swiss-Prot
PharmGKB PA134930939 PharmGKB
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot
SMART ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot
UniProt Q15938 ENTREZGENE
  Q9UEG4 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q15938 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-25 ZNF629  zinc finger protein 629  ZNF65  zinc finger protein 65  Data merged from RGD:1350374 737654 PROVISIONAL