MRPS12 (mitochondrial ribosomal protein S12) - Rat Genome Database

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Gene: MRPS12 (mitochondrial ribosomal protein S12) Homo sapiens
Analyze
Symbol: MRPS12
Name: mitochondrial ribosomal protein S12
RGD ID: 1314714
HGNC Page HGNC:10380
Description: Enables RNA binding activity. Predicted to be involved in mitochondrial translation. Located in mitochondrion. Part of mitochondrial small ribosomal subunit.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: 28S ribosomal protein S12, mitochondrial; mitochondrial small ribosomal subunit protein uS12m; MPR-S12; MRP-S12; MT-RPS12; ribosomal protein, mitochondrial, S12; RPMS12; RPS12; RPSM12; S12mt; small ribosomal subunit protein uS12m; uS12m
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381938,930,944 - 38,933,168 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1938,930,944 - 38,933,168 (+)EnsemblGRCh38hg38GRCh38
GRCh371939,421,584 - 39,423,808 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361944,113,188 - 44,115,500 (+)NCBINCBI36Build 36hg18NCBI36
Build 341944,113,433 - 44,115,497NCBI
Celera1936,223,777 - 36,226,089 (+)NCBICelera
Cytogenetic Map19q13.2NCBI
HuRef1935,867,947 - 35,870,259 (+)NCBIHuRef
CHM1_11939,421,743 - 39,424,055 (+)NCBICHM1_1
T2T-CHM13v2.01941,734,913 - 41,737,137 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9434165   PMID:9545647   PMID:9790755   PMID:10542210   PMID:11279123   PMID:11402041   PMID:11543634   PMID:12477932   PMID:12646258   PMID:12706105   PMID:12970870   PMID:15489334  
PMID:16169070   PMID:18790094   PMID:18854154   PMID:19439209   PMID:20877624   PMID:21873635   PMID:22681889   PMID:22810586   PMID:25838379   PMID:26344197   PMID:26496610   PMID:27023846  
PMID:27545878   PMID:28514442   PMID:29568061   PMID:29656893   PMID:29802200   PMID:30232004   PMID:30463901   PMID:31091453   PMID:31980649   PMID:32457219   PMID:32694731   PMID:32707033  
PMID:32807901   PMID:32877691   PMID:33301849   PMID:33663122   PMID:33961781   PMID:34373451   PMID:34709727   PMID:34800366   PMID:35013218   PMID:35140242   PMID:35439318   PMID:35696571  
PMID:35748872   PMID:35944360   PMID:36114006   PMID:36215168   PMID:36244648   PMID:36574265   PMID:37314216   PMID:38697112   PMID:38803224  


Genomics

Comparative Map Data
MRPS12
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381938,930,944 - 38,933,168 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1938,930,944 - 38,933,168 (+)EnsemblGRCh38hg38GRCh38
GRCh371939,421,584 - 39,423,808 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361944,113,188 - 44,115,500 (+)NCBINCBI36Build 36hg18NCBI36
Build 341944,113,433 - 44,115,497NCBI
Celera1936,223,777 - 36,226,089 (+)NCBICelera
Cytogenetic Map19q13.2NCBI
HuRef1935,867,947 - 35,870,259 (+)NCBIHuRef
CHM1_11939,421,743 - 39,424,055 (+)NCBICHM1_1
T2T-CHM13v2.01941,734,913 - 41,737,137 (+)NCBIT2T-CHM13v2.0
Mrps12
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39728,439,066 - 28,441,246 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl728,439,066 - 28,441,245 (-)EnsemblGRCm39 Ensembl
GRCm38728,739,641 - 28,741,821 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl728,739,641 - 28,741,820 (-)EnsemblGRCm38mm10GRCm38
MGSCv37729,524,660 - 29,526,800 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36728,448,401 - 28,450,542 (-)NCBIMGSCv36mm8
Celera723,300,048 - 23,302,188 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map716.91NCBI
Mrps12
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8193,153,424 - 93,156,422 (-)NCBIGRCr8
mRatBN7.2184,025,896 - 84,028,896 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl184,025,899 - 84,028,780 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx189,435,804 - 89,438,698 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0197,894,732 - 97,897,626 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0191,191,660 - 91,194,554 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0186,920,679 - 86,923,626 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl186,920,680 - 86,923,575 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0188,101,811 - 88,104,707 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4183,845,161 - 83,848,056 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1183,923,279 - 83,926,153 (-)NCBI
Celera178,418,331 - 78,421,225 (-)NCBICelera
Cytogenetic Map1q21NCBI
Mrps12
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955468600,309 - 603,652 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955468600,309 - 603,652 (-)NCBIChiLan1.0ChiLan1.0
MRPS12
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22045,234,198 - 45,236,509 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11947,105,004 - 47,107,098 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01936,037,185 - 36,039,801 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11944,586,124 - 44,588,589 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1944,586,124 - 44,588,589 (+)Ensemblpanpan1.1panPan2
MRPS12
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11114,189,101 - 114,192,557 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1114,188,996 - 114,192,410 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1113,590,587 - 113,594,248 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01114,788,811 - 114,792,470 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1114,788,863 - 114,792,276 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11114,346,558 - 114,350,219 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01113,979,732 - 113,983,393 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01114,975,466 - 114,979,126 (-)NCBIUU_Cfam_GSD_1.0
Mrps12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934913,443,701 - 13,447,349 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366611,871,947 - 1,875,418 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366611,871,934 - 1,875,418 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MRPS12
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl647,728,551 - 47,736,050 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1647,728,518 - 47,732,042 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2643,276,419 - 43,278,223 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MRPS12
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1633,551,812 - 33,554,266 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl633,551,679 - 33,554,575 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607311,574,309 - 11,576,763 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mrps12
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479412,280,654 - 12,284,029 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479412,280,613 - 12,284,035 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MRPS12
10 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 19q13.12-13.2(chr19:37319377-42738688)x3 copy number gain See cases [RCV000050636] Chr19:37319377..42738688 [GRCh38]
Chr19:37810279..43242840 [GRCh37]
Chr19:42502119..47934680 [NCBI36]
Chr19:19q13.12-13.2
pathogenic
GRCh38/hg38 19p13.2-q13.31(chr19:11227942-44626354)x3 copy number gain See cases [RCV000133888] Chr19:11227942..44626354 [GRCh38]
Chr19:11338618..45129651 [GRCh37]
Chr19:11199618..49821491 [NCBI36]
Chr19:19p13.2-q13.31
pathogenic
GRCh37/hg19 19q13.12-13.2(chr19:37582250-41630908)x3 copy number gain See cases [RCV000239839] Chr19:37582250..41630908 [GRCh37]
Chr19:19q13.12-13.2
pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888) copy number gain See cases [RCV000512296] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888)x3 copy number gain See cases [RCV000511289] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic|uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:68029-59110290)x3 copy number gain not provided [RCV000752439] Chr19:68029..59110290 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:260912-59097160)x3 copy number gain not provided [RCV000752444] Chr19:260912..59097160 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19q11-13.33(chr19:28271106-49213832)x3 copy number gain not provided [RCV000845733] Chr19:28271106..49213832 [GRCh37]
Chr19:19q11-13.33
pathogenic
NC_000019.9:g.(?_39205089)_(40913839_?)dup duplication Type 2 diabetes mellitus [RCV003107444]|not provided [RCV003122562] Chr19:39205089..40913839 [GRCh37]
Chr19:19q13.2
uncertain significance|no classifications from unflagged records
NM_033362.4(MRPS12):c.124C>T (p.Pro42Ser) single nucleotide variant not specified [RCV004324575] Chr19:38932407 [GRCh38]
Chr19:39423047 [GRCh37]
Chr19:19q13.2
uncertain significance
GRCh37/hg19 19p13.11-q13.2(chr19:19546923-41313229)x3 copy number gain Specific learning disability [RCV001801194] Chr19:19546923..41313229 [GRCh37]
Chr19:19p13.11-q13.2
pathogenic
NC_000019.9:g.(?_38375572)_(39738787_?)dup duplication RYR1-related disorder [RCV003111411] Chr19:38375572..39738787 [GRCh37]
Chr19:19q13.13-13.2
uncertain significance
NM_033362.4(MRPS12):c.139C>T (p.Arg47Trp) single nucleotide variant not specified [RCV004199848] Chr19:38932422 [GRCh38]
Chr19:39423062 [GRCh37]
Chr19:19q13.2
uncertain significance
NM_033362.4(MRPS12):c.265C>T (p.Arg89Cys) single nucleotide variant not specified [RCV004211362] Chr19:38932548 [GRCh38]
Chr19:39423188 [GRCh37]
Chr19:19q13.2
uncertain significance
NM_033362.4(MRPS12):c.144G>T (p.Lys48Asn) single nucleotide variant not specified [RCV004167521] Chr19:38932427 [GRCh38]
Chr19:39423067 [GRCh37]
Chr19:19q13.2
uncertain significance
NM_033362.4(MRPS12):c.193A>G (p.Thr65Ala) single nucleotide variant not specified [RCV004226046] Chr19:38932476 [GRCh38]
Chr19:39423116 [GRCh37]
Chr19:19q13.2
uncertain significance
NM_033362.4(MRPS12):c.56C>T (p.Ala19Val) single nucleotide variant not specified [RCV004312124] Chr19:38932339 [GRCh38]
Chr19:39422979 [GRCh37]
Chr19:19q13.2
uncertain significance
NM_033362.4(MRPS12):c.135G>A (p.Pro45=) single nucleotide variant not provided [RCV003415230] Chr19:38932418 [GRCh38]
Chr19:39423058 [GRCh37]
Chr19:19q13.2
likely benign
GRCh37/hg19 19q11-13.2(chr19:28271146-41508851)x3 copy number gain not specified [RCV003986115] Chr19:28271146..41508851 [GRCh37]
Chr19:19q11-13.2
pathogenic
NM_033362.3(MRPS12):c.-272G>A single nucleotide variant MRPS12-related disorder [RCV003924359] Chr19:38930746 [GRCh38]
Chr19:39421386 [GRCh37]
Chr19:19q13.2
likely benign
NM_033362.4(MRPS12):c.266G>A (p.Arg89His) single nucleotide variant not specified [RCV004502498] Chr19:38932549 [GRCh38]
Chr19:39423189 [GRCh37]
Chr19:19q13.2
uncertain significance
NM_033362.4(MRPS12):c.335G>A (p.Gly112Asp) single nucleotide variant not specified [RCV004502500] Chr19:38932618 [GRCh38]
Chr19:39423258 [GRCh37]
Chr19:19q13.2
uncertain significance
NM_033362.4(MRPS12):c.412A>G (p.Lys138Glu) single nucleotide variant not specified [RCV004502504] Chr19:38932695 [GRCh38]
Chr19:39423335 [GRCh37]
Chr19:19q13.2
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1105
Count of miRNA genes:466
Interacting mature miRNAs:511
Transcripts:ENST00000308018, ENST00000402029, ENST00000407800, ENST00000598734
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1559110SCL22_HSerum cholesterol level QTL 22 (human)3.590.000241Lipid levelLDL cholesterol193190759457907594Human
1331657COPD9_HChronic obstructive pulmonary disease QTL 9 (human)1.94Chronic airflow obstructionpost-bronchodilator FEV1193102176057021760Human

Markers in Region
RH39132  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371939,423,300 - 39,423,509UniSTSGRCh37
Build 361944,115,140 - 44,115,349RGDNCBI36
Celera1936,225,729 - 36,225,938RGD
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
HuRef1935,869,899 - 35,870,108UniSTS
RH15855  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371939,423,480 - 39,423,643UniSTSGRCh37
Build 361944,115,320 - 44,115,483RGDNCBI36
Celera1936,225,909 - 36,226,072RGD
Cytogenetic Map19q13.1-q13.2UniSTS
HuRef1935,870,079 - 35,870,242UniSTS
GeneMap99-GB4 RH Map19232.59UniSTS
NCBI RH Map19418.1UniSTS
MRPS12_1782  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371939,423,014 - 39,423,793UniSTSGRCh37
Build 361944,114,854 - 44,115,633RGDNCBI36
Celera1936,225,443 - 36,226,222RGD
HuRef1935,869,613 - 35,870,392UniSTS
MRPS12  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371939,423,128 - 39,423,300UniSTSGRCh37
Celera1936,225,557 - 36,225,729UniSTS
HuRef1935,869,727 - 35,869,899UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1

Sequence


Ensembl Acc Id: ENST00000308018   ⟹   ENSP00000308845
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1938,930,944 - 38,933,168 (+)Ensembl
Ensembl Acc Id: ENST00000402029   ⟹   ENSP00000384579
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1938,930,999 - 38,933,020 (+)Ensembl
Ensembl Acc Id: ENST00000407800   ⟹   ENSP00000384952
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1938,930,954 - 38,933,162 (+)Ensembl
Ensembl Acc Id: ENST00000598734
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1938,930,944 - 38,931,861 (+)Ensembl
RefSeq Acc Id: NM_021107   ⟹   NP_066930
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381938,930,954 - 38,933,020 (+)NCBI
GRCh371939,421,348 - 39,423,660 (+)RGD
Build 361944,113,434 - 44,115,500 (+)NCBI Archive
Celera1936,223,777 - 36,226,089 (+)RGD
HuRef1935,867,947 - 35,870,259 (+)RGD
CHM1_11939,421,989 - 39,424,055 (+)NCBI
T2T-CHM13v2.01941,734,923 - 41,736,989 (+)NCBI
Sequence:
RefSeq Acc Id: NM_033362   ⟹   NP_203526
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381938,930,944 - 38,933,168 (+)NCBI
GRCh371939,421,348 - 39,423,660 (+)RGD
Build 361944,113,188 - 44,115,500 (+)NCBI Archive
Celera1936,223,777 - 36,226,089 (+)RGD
HuRef1935,867,947 - 35,870,259 (+)RGD
CHM1_11939,421,743 - 39,424,055 (+)NCBI
T2T-CHM13v2.01941,734,913 - 41,737,137 (+)NCBI
Sequence:
RefSeq Acc Id: NM_033363   ⟹   NP_203527
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381938,930,954 - 38,933,020 (+)NCBI
GRCh371939,421,348 - 39,423,660 (+)RGD
Build 361944,113,434 - 44,115,500 (+)NCBI Archive
Celera1936,223,777 - 36,226,089 (+)RGD
HuRef1935,867,947 - 35,870,259 (+)RGD
CHM1_11939,421,989 - 39,424,055 (+)NCBI
T2T-CHM13v2.01941,734,923 - 41,736,989 (+)NCBI
Sequence:
RefSeq Acc Id: NP_203526   ⟸   NM_033362
- Peptide Label: precursor
- UniProtKB: O15235 (UniProtKB/Swiss-Prot),   Q53X98 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_066930   ⟸   NM_021107
- Peptide Label: precursor
- UniProtKB: O15235 (UniProtKB/Swiss-Prot),   Q53X98 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_203527   ⟸   NM_033363
- Peptide Label: precursor
- UniProtKB: O15235 (UniProtKB/Swiss-Prot),   Q53X98 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSP00000308845   ⟸   ENST00000308018
Ensembl Acc Id: ENSP00000384579   ⟸   ENST00000402029
Ensembl Acc Id: ENSP00000384952   ⟸   ENST00000407800

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O15235-F1-model_v2 AlphaFold O15235 1-138 view protein structure

Promoters
RGD ID:7239863
Promoter ID:EPDNEW_H25677
Type:initiation region
Name:MRPS12_1
Description:mitochondrial ribosomal protein S12
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381938,930,944 - 38,931,004EPDNEW
RGD ID:6795819
Promoter ID:HG_KWN:29873
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_2Hour,   K562,   Lymphoblastoid
Transcripts:NM_021107,   NM_033362,   NM_033363
Position:
Human AssemblyChrPosition (strand)Source
Build 361944,113,129 - 44,113,629 (+)MPROMDB
RGD ID:6853594
Promoter ID:EP74625
Type:initiation region
Name:HS_MRPS12
Description:Mitochondrial ribosomal protein S12.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Mammalian gene collection (MGC) full-length cDNA cloning
Position:
Human AssemblyChrPosition (strand)Source
Build 361944,113,474 - 44,113,534EPD

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:10380 AgrOrtholog
COSMIC MRPS12 COSMIC
Ensembl Genes ENSG00000128626 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSG00000283018 UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000308018 ENTREZGENE
  ENST00000308018.9 UniProtKB/Swiss-Prot
  ENST00000402029 ENTREZGENE
  ENST00000402029.3 UniProtKB/Swiss-Prot
  ENST00000407800 ENTREZGENE
  ENST00000407800.2 UniProtKB/Swiss-Prot
  ENST00000634246.1 UniProtKB/Swiss-Prot
  ENST00000634400.1 UniProtKB/Swiss-Prot
  ENST00000634704.1 UniProtKB/Swiss-Prot
Gene3D-CATH 2.40.50.140 UniProtKB/Swiss-Prot
GTEx ENSG00000128626 GTEx
  ENSG00000283018 GTEx
HGNC ID HGNC:10380 ENTREZGENE
Human Proteome Map MRPS12 Human Proteome Map
InterPro NA-bd_OB-fold UniProtKB/Swiss-Prot
  Ribosomal_S12/S23 UniProtKB/Swiss-Prot
  Ribosomal_S12_bac UniProtKB/Swiss-Prot
KEGG Report hsa:6183 UniProtKB/Swiss-Prot
NCBI Gene 6183 ENTREZGENE
OMIM 603021 OMIM
PANTHER PTHR11652 UniProtKB/Swiss-Prot
Pfam Ribosom_S12_S23 UniProtKB/Swiss-Prot
PharmGKB PA30996 PharmGKB
PRINTS RIBOSOMALS12 UniProtKB/Swiss-Prot
PROSITE RIBOSOMAL_S12 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF50249 UniProtKB/Swiss-Prot
UniProt O15235 ENTREZGENE
  Q53X98 ENTREZGENE
  RT12_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary Q53X98 UniProtKB/Swiss-Prot