Ormdl2 (ORM1-like 2 (S. cerevisiae)) - Rat Genome Database

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Gene: Ormdl2 (ORM1-like 2 (S. cerevisiae)) Mus musculus
Analyze
Symbol: Ormdl2
Name: ORM1-like 2 (S. cerevisiae)
RGD ID: 1313792
MGI Page MGI
Description: Predicted to be involved in ceramide metabolic process; intracellular sphingolipid homeostasis; and sphingolipid biosynthetic process. Predicted to act upstream of or within negative regulation of ceramide biosynthetic process. Predicted to be located in endoplasmic reticulum. Predicted to be part of serine palmitoyltransferase complex. Orthologous to human ORMDL2 (ORMDL sphingolipid biosynthesis regulator 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 0610012C09Rik; ORM1-like protein 2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910128,653,771 - 128,657,498 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10128,653,771 - 128,657,514 (-)EnsemblGRCm39 Ensembl
GRCm3810128,817,902 - 128,821,629 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10128,817,902 - 128,821,645 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710128,254,513 - 128,258,687 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610128,220,851 - 128,224,543 (-)NCBIMGSCv36mm8
Celera10131,210,016 - 131,214,206 (-)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1077.16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11752298   PMID:12093374   PMID:12477932   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:18799693   PMID:21267068   PMID:21873635   PMID:25691431   PMID:30418981   PMID:31880535   PMID:33643282   PMID:37316542  


Genomics

Comparative Map Data
Ormdl2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910128,653,771 - 128,657,498 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10128,653,771 - 128,657,514 (-)EnsemblGRCm39 Ensembl
GRCm3810128,817,902 - 128,821,629 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10128,817,902 - 128,821,645 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710128,254,513 - 128,258,687 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610128,220,851 - 128,224,543 (-)NCBIMGSCv36mm8
Celera10131,210,016 - 131,214,206 (-)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1077.16NCBI
ORMDL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381255,818,041 - 55,821,879 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1255,818,041 - 55,821,879 (+)EnsemblGRCh38hg38GRCh38
GRCh371256,211,825 - 56,215,663 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361254,498,073 - 54,501,226 (+)NCBINCBI36Build 36hg18NCBI36
Build 341254,499,048 - 54,501,224NCBI
Celera1255,864,167 - 55,867,320 (+)NCBICelera
Cytogenetic Map12q13.2NCBI
HuRef1253,250,189 - 53,253,342 (+)NCBIHuRef
CHM1_11256,178,576 - 56,181,729 (+)NCBICHM1_1
T2T-CHM13v2.01255,784,685 - 55,788,525 (+)NCBIT2T-CHM13v2.0
Ormdl2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr871,832,368 - 1,835,501 (-)NCBIGRCr8
mRatBN7.271,247,869 - 1,250,999 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl71,246,479 - 1,250,907 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx74,012,326 - 4,015,404 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.075,887,987 - 5,891,065 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.076,189,261 - 6,192,341 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.073,242,991 - 3,246,085 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl73,242,991 - 3,246,071 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.073,214,561 - 3,217,649 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.472,118,025 - 2,121,105 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.172,118,029 - 2,121,070 (-)NCBI
Celera71,118,626 - 1,121,706 (-)NCBICelera
Cytogenetic Map7q11NCBI
Ormdl2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554583,451,021 - 3,457,086 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554583,451,434 - 3,454,259 (+)NCBIChiLan1.0ChiLan1.0
ORMDL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21038,507,967 - 38,510,461 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11238,504,753 - 38,507,231 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01233,091,020 - 33,093,794 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11233,814,895 - 33,818,669 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1233,815,514 - 33,818,669 (-)Ensemblpanpan1.1panPan2
ORMDL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.110203,750 - 206,247 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha10259,654 - 268,284 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.010204,482 - 213,096 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl10210,674 - 217,396 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.110182,409 - 191,038 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.010425,203 - 433,856 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.010549,440 - 558,070 (+)NCBIUU_Cfam_GSD_1.0
Ormdl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494558,586,738 - 58,589,508 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936646280,661 - 287,144 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936646280,745 - 283,488 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ORMDL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl521,262,193 - 21,264,685 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1521,262,134 - 21,264,689 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2522,742,352 - 22,744,872 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ORMDL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11151,768,533 - 51,771,461 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1151,768,642 - 51,770,998 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037194,221,943 - 194,225,433 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ormdl2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480212,197,114 - 12,199,983 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480212,197,114 - 12,200,044 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ormdl2
87 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:426
Count of miRNA genes:322
Interacting mature miRNAs:351
Transcripts:ENSMUST00000026409
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142461Bmd25_mbone mineral density 25 (mouse)Not determined1097217101130530862Mouse
1301968Estq4_mestradiol regulated response QTL 4 (mouse)Not determined10100986516130530862Mouse
12904000Opfaq7_mopen field activity QTL 7 (mouse)10127746318129466375Mouse
12904001Opfaq10_mopen field activity QTL 10 (mouse)10125633671129466375Mouse
12879490Frct3_mfear conditioning traits 3 (mouse)10122785970129466996Mouse
11049570Lmr25b_mleishmaniasis resistance 25b (mouse)10108575094130530862Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
11533921Mvb2_mmodifier of vibrator 2 (mouse)1097217101130530862Mouse
4141361Cfmq3_mcystic fibrosis modifier QTL 3 (mouse)Not determined10101497164130530862Mouse
4141487Tgq21_mtriglyceride QTL 21 (mouse)Not determined104110021130530862Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039175996129635869Mouse
1301895Exq1_mexploratory and excitability QTL 1 (mouse)Not determined10102847852130530862Mouse
1300679Nociq2_mnociceptive sensitivity inflammatory QTL 2 (mouse)Not determined10105041304130530862Mouse
1300678Leg2_mlongevity extending gene 2 (mouse)Not determined10102506908130530862Mouse
14746996Manh69_mmandible shape 69 (mouse)10104763638130530862Mouse
12880413V125Dq9_mvitamin D active form serum level QTL 9 (mouse)1097535905130530862Mouse
1301901Im5_mimmunoregulatory 5 (mouse)Not determined10101497164130530862Mouse
4141153Ltgq2_mliver triglyceride QTL 2 (mouse)Not determined108515907130530862Mouse
11039496Ltpr5b_mLeishmania tropica response 5b (mouse)10108575094130530862Mouse
1357744Cfbw4_mcystic fibrosis body weight 4 (mouse)Not determined10100986516130530862Mouse
4141402T2dm1sa_mtype 2 diabetes mellitus 1 in SMXA RI mice (mouse)Not determined97758644130530862Mouse
11041664Lmr25_mleishmaniasis resistance 25 (mouse)10108575094130530862Mouse
1302200Sle12_msystematic lupus erythematosus susceptibility 12 (mouse)Not determined10105041304130530862Mouse
26884405Huml2_mhumerus length 2, 5 week (mouse)1069735830130430862Mouse
11533919Mvb4_mmodifier of vibrator 4 (mouse)397217101130530862Mouse
4141007Obrq10_mobesity resistance QTL 10 (mouse)Not determined103243727130530862Mouse
12911221Frct3d_mfear conditioning traits 3d (mouse)10127675574129466996Mouse
12911220Frct3c_mfear conditioning traits 3c (mouse)10122785970129466996Mouse
11049563Lmr25a_mleishmaniasis resistance 25a (mouse)10108575094130530862Mouse
4142089Obrq9_mobesity resistance QTL 9 (mouse)Not determined108515907130530862Mouse
12911219Frct3b_mfear conditioning traits 3b (mouse)10127675574129466996Mouse
14696727Kidrq2_mkidney weight, right QTL 2 (mouse)10102902508130530862Mouse
12911218Frct3a_mfear conditioning traits 3a (mouse)10122785970129466996Mouse
11040593Lmr5e_mleishmaniasis resistance 5e (mouse)1099220635130530862Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039175996129635869Mouse
11040594Lmr5f_mleishmaniasis resistance 5f (mouse)10105179713130530862Mouse
11040595Lmr5c_mleishmaniasis resistance 5c (mouse)1099220635130530862Mouse
1357544Vtbt10_mvertebral trabecular bone trait 10 (mouse)Not determined1097217101130530862Mouse
11040596Lmr5d_mleishmaniasis resistance 5d (mouse)10105179713130530862Mouse
11040597Lmr5a_mleishmaniasis resistance 5a (mouse)1099220635130530862Mouse
1357482Nhdlq4_mnon-HDL QTL 4 (mouse)Not determined10105041304130530862Mouse
11040598Lmr5b_mleishmaniasis resistance 5b (mouse)10105179713130530862Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001359169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_024180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA672064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC131081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV584065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY167865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV065903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000026409   ⟹   ENSMUSP00000026409
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10128,653,771 - 128,657,463 (-)Ensembl
GRCm38.p6 Ensembl10128,817,902 - 128,821,594 (-)Ensembl
Ensembl Acc Id: ENSMUST00000217685   ⟹   ENSMUSP00000151644
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10128,654,421 - 128,657,460 (-)Ensembl
GRCm38.p6 Ensembl10128,818,552 - 128,821,591 (-)Ensembl
Ensembl Acc Id: ENSMUST00000219215   ⟹   ENSMUSP00000151335
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10128,654,351 - 128,657,475 (-)Ensembl
GRCm38.p6 Ensembl10128,818,482 - 128,821,606 (-)Ensembl
Ensembl Acc Id: ENSMUST00000219524   ⟹   ENSMUSP00000151697
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10128,654,592 - 128,657,514 (-)Ensembl
GRCm38.p6 Ensembl10128,818,723 - 128,821,645 (-)Ensembl
RefSeq Acc Id: NM_001359169   ⟹   NP_001346098
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910128,653,771 - 128,657,498 (-)NCBI
GRCm3810128,817,902 - 128,821,629 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359170   ⟹   NP_001346099
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910128,653,771 - 128,657,498 (-)NCBI
GRCm3810128,817,902 - 128,821,629 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359171   ⟹   NP_001346100
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910128,653,771 - 128,657,498 (-)NCBI
GRCm3810128,817,902 - 128,821,629 (-)NCBI
Sequence:
RefSeq Acc Id: NM_024180   ⟹   NP_077142
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910128,653,771 - 128,657,498 (-)NCBI
GRCm3810128,817,902 - 128,821,629 (-)NCBI
MGSCv3710128,254,513 - 128,258,687 (-)RGD
Celera10131,210,016 - 131,214,206 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_152853
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910128,653,771 - 128,657,498 (-)NCBI
GRCm3810128,817,902 - 128,821,629 (-)NCBI
Sequence:
RefSeq Acc Id: NP_077142   ⟸   NM_024180
- UniProtKB: Q9CSJ7 (UniProtKB/Swiss-Prot),   Q8CF72 (UniProtKB/Swiss-Prot),   Q9CVL6 (UniProtKB/Swiss-Prot),   Q9CQZ0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001346098   ⟸   NM_001359169
- UniProtKB: Q9CSJ7 (UniProtKB/Swiss-Prot),   Q9CQZ0 (UniProtKB/Swiss-Prot),   Q8CF72 (UniProtKB/Swiss-Prot),   Q9CVL6 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001346100   ⟸   NM_001359171
- UniProtKB: Q9CSJ7 (UniProtKB/Swiss-Prot),   Q9CQZ0 (UniProtKB/Swiss-Prot),   Q8CF72 (UniProtKB/Swiss-Prot),   Q9CVL6 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001346099   ⟸   NM_001359170
- UniProtKB: Q9CSJ7 (UniProtKB/Swiss-Prot),   Q9CQZ0 (UniProtKB/Swiss-Prot),   Q8CF72 (UniProtKB/Swiss-Prot),   Q9CVL6 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000151644   ⟸   ENSMUST00000217685
Ensembl Acc Id: ENSMUSP00000026409   ⟸   ENSMUST00000026409
Ensembl Acc Id: ENSMUSP00000151335   ⟸   ENSMUST00000219215
Ensembl Acc Id: ENSMUSP00000151697   ⟸   ENSMUST00000219524

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9CQZ0-F1-model_v2 AlphaFold Q9CQZ0 1-153 view protein structure

Promoters
RGD ID:6819691
Promoter ID:MM_KWN:6027
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   Brain,   Kidney,   Liver,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000026409
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3610128,257,086 - 128,258,387 (-)MPROMDB
RGD ID:6819707
Promoter ID:MM_KWN:6028
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_024180,   NM_025364,   UC007HOP.1,   UC007HOQ.1,   UC007HOS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3610128,258,571 - 128,259,071 (-)MPROMDB
RGD ID:8673670
Promoter ID:EPDNEW_M14866
Type:initiation region
Name:Ormdl2_1
Description:Mus musculus ORM1-like 2 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3810128,821,595 - 128,821,655EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914094 AgrOrtholog
Ensembl Genes ENSMUSG00000025353 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000026409 ENTREZGENE
  ENSMUST00000026409.5 UniProtKB/Swiss-Prot
  ENSMUST00000217685.2 UniProtKB/Swiss-Prot
  ENSMUST00000219215 ENTREZGENE
  ENSMUST00000219215.2 UniProtKB/Swiss-Prot
  ENSMUST00000219524 ENTREZGENE
  ENSMUST00000219524.2 UniProtKB/Swiss-Prot
InterPro ORMDL UniProtKB/Swiss-Prot
KEGG Report mmu:66844 UniProtKB/Swiss-Prot
MGD MGI:1914094 ENTREZGENE
NCBI Gene 66844 ENTREZGENE
PANTHER PTHR12665 UniProtKB/Swiss-Prot
  PTHR12665:SF13 UniProtKB/Swiss-Prot
Pfam ORMDL UniProtKB/Swiss-Prot
PhenoGen Ormdl2 PhenoGen
PIRSF ORMDL UniProtKB/Swiss-Prot
UniProt ORML2_MOUSE UniProtKB/Swiss-Prot
  Q8CF72 ENTREZGENE
  Q9CQZ0 ENTREZGENE
  Q9CSJ7 ENTREZGENE
  Q9CVL6 ENTREZGENE
UniProt Secondary Q8CF72 UniProtKB/Swiss-Prot
  Q9CSJ7 UniProtKB/Swiss-Prot
  Q9CVL6 UniProtKB/Swiss-Prot