Kctd15 (potassium channel tetramerisation domain containing 15) - Rat Genome Database

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Gene: Kctd15 (potassium channel tetramerisation domain containing 15) Mus musculus
Analyze
Symbol: Kctd15
Name: potassium channel tetramerisation domain containing 15
RGD ID: 1313573
MGI Page MGI
Description: Predicted to enable identical protein binding activity and transcription corepressor activity. Predicted to be involved in negative regulation of DNA-templated transcription. Located in nucleus. Is expressed in several structures, including adrenal gland; esophagus; hemolymphoid system gland; nervous system; and respiratory system. Orthologous to human KCTD15 (potassium channel tetramerization domain containing 15).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: BC031749; BTB/POZ domain-containing protein KCTD15; MGC25497; potassium channel tetramerization domain-containing protein 15
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39734,336,424 - 34,354,934 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl734,338,439 - 34,356,157 (-)EnsemblGRCm39 Ensembl
GRCm38734,636,999 - 34,655,509 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl734,639,014 - 34,656,732 (-)EnsemblGRCm38mm10GRCm38
MGSCv37735,424,034 - 35,437,860 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36734,347,775 - 34,361,601 (-)NCBIMGSCv36mm8
Celera729,774,494 - 29,788,312 (-)NCBICelera
Cytogenetic Map7B1- B2NCBI
cM Map720.41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1-nitropyrene  (ISO)
17alpha-ethynylestradiol  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
acetamide  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
bromobenzene  (ISO)
butanal  (ISO)
carbon nanotube  (EXP)
chlordecone  (EXP)
chlorpyrifos  (EXP)
choline  (EXP)
chrysene  (EXP)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
cyclosporin A  (ISO)
diazinon  (ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
enzyme inhibitor  (ISO)
ethyl methanesulfonate  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
furan  (ISO)
genistein  (EXP)
gentamycin  (ISO)
L-methionine  (EXP)
methoxychlor  (ISO)
methyl methanesulfonate  (ISO)
N,N-diethyl-m-toluamide  (ISO)
nickel dichloride  (ISO)
nickel sulfate  (ISO)
O-methyleugenol  (ISO)
oxaliplatin  (ISO)
paracetamol  (EXP,ISO)
PCB138  (EXP)
pentachlorophenol  (EXP)
pentanal  (ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (ISO)
permethrin  (ISO)
potassium chromate  (ISO)
propanal  (ISO)
propionic acid  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium dichromate  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
tunicamycin  (EXP,ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IDA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal coat/ hair morphology  (IAGP)
abnormal cranial suture morphology  (IAGP)
abnormal craniofacial development  (IAGP)
abnormal embryo size  (IEA)
abnormal eyelid development  (IAGP)
abnormal hair follicle morphology  (IAGP)
abnormal hair shaft morphology  (IAGP)
abnormal heart morphology  (IAGP)
abnormal intramembranous bone ossification  (IAGP)
abnormal nasal cartilage morphology  (IAGP)
abnormal nose morphology  (IAGP)
abnormal scalp morphology  (IAGP)
abnormal skin development  (IAGP)
abnormal vibrissa follicle morphology  (IAGP)
absent incisors  (IAGP)
absent lower incisors  (IAGP)
absent nasal bone  (IAGP)
absent upper incisors  (IAGP)
anhidrosis  (IAGP)
atrioventricular septal defect  (IAGP)
belly spot  (IAGP)
bicuspid aortic valve  (IAGP)
cardiovascular system phenotype  (IAGP)
curly vibrissae  (IAGP)
decreased body size  (IAGP)
decreased circulating alkaline phosphatase level  (IEA)
decreased eccrine gland number  (IAGP)
decreased food intake  (IEA)
delayed cranial suture closure  (IAGP)
delayed eyelid opening  (IAGP)
delayed hair appearance  (IAGP)
delayed intramembranous bone ossification  (IAGP)
ectopic neuron  (IAGP)
eyelids open at birth  (IAGP)
increased blood urea nitrogen level  (IEA)
increased circulating creatinine level  (IEA)
interdigital webbing  (IAGP)
overriding aortic valve  (IAGP)
perimembraneous ventricular septal defect  (IAGP)
postnatal growth retardation  (IAGP)
preweaning lethality, complete penetrance  (IEA)
renal/urinary system phenotype  (IAGP)
short frontal bone  (IAGP)
skin lesions  (IAGP)
small hair follicles  (IAGP)
small nasal bone  (IAGP)
small sebaceous gland  (IAGP)
sparse hair  (IAGP)
thin epidermis  (IAGP)
thin skin  (IAGP)
wide metopic suture  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. Mouse MP Annotation Import Pipeline RGD automated import pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:14610273   PMID:15226823   PMID:15345747   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:16919269   PMID:18799693   PMID:21677750   PMID:24086424   PMID:24194600   PMID:25187989   PMID:26839965   PMID:27626380   PMID:29665387   PMID:38113115   PMID:38355793  


Genomics

Comparative Map Data
Kctd15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39734,336,424 - 34,354,934 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl734,338,439 - 34,356,157 (-)EnsemblGRCm39 Ensembl
GRCm38734,636,999 - 34,655,509 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl734,639,014 - 34,656,732 (-)EnsemblGRCm38mm10GRCm38
MGSCv37735,424,034 - 35,437,860 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36734,347,775 - 34,361,601 (-)NCBIMGSCv36mm8
Celera729,774,494 - 29,788,312 (-)NCBICelera
Cytogenetic Map7B1- B2NCBI
cM Map720.41NCBI
KCTD15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381933,794,040 - 33,815,761 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1933,795,933 - 33,815,763 (+)EnsemblGRCh38hg38GRCh38
GRCh371934,287,775 - 34,306,666 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361938,979,607 - 38,996,988 (+)NCBINCBI36Build 36hg18NCBI36
Build 341938,979,606 - 38,996,984NCBI
Celera1930,981,389 - 31,000,301 (+)NCBICelera
Cytogenetic Map19q13.11NCBI
HuRef1930,786,796 - 30,805,705 (+)NCBIHuRef
CHM1_11934,289,029 - 34,307,934 (+)NCBICHM1_1
T2T-CHM13v2.01936,314,814 - 36,336,529 (+)NCBIT2T-CHM13v2.0
Kctd15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8196,395,794 - 96,411,502 (-)NCBIGRCr8
mRatBN7.2187,258,658 - 87,271,979 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl187,258,658 - 87,273,497 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx192,662,187 - 92,675,501 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01101,128,171 - 101,141,482 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0194,420,478 - 94,433,788 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0190,506,697 - 90,522,217 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl190,506,697 - 90,520,344 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0191,645,833 - 91,661,530 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4187,117,385 - 87,130,690 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera181,623,383 - 81,636,586 (-)NCBICelera
Cytogenetic Map1q21NCBI
Kctd15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554683,516,688 - 3,532,554 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554683,517,470 - 3,531,074 (+)NCBIChiLan1.0ChiLan1.0
KCTD15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22039,784,131 - 39,803,158 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11941,784,261 - 41,803,291 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01930,734,721 - 30,753,756 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11939,474,637 - 39,492,760 (+)NCBIpanpan1.1PanPan1.1panPan2
KCTD15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11118,421,710 - 118,435,121 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1118,422,444 - 118,434,699 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1117,819,620 - 117,834,461 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01119,017,008 - 119,031,923 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1119,019,420 - 119,031,947 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11118,578,232 - 118,593,107 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01118,204,219 - 118,219,062 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01119,262,973 - 119,277,873 (-)NCBIUU_Cfam_GSD_1.0
Kctd15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244093499,548,346 - 9,563,774 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365702,080,547 - 2,096,929 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365702,080,549 - 2,096,929 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCTD15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl643,529,806 - 43,544,186 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1643,528,677 - 43,545,834 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
KCTD15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1628,839,038 - 28,857,506 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl628,840,526 - 28,858,037 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660736,587,720 - 6,606,703 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kctd15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247949,358,497 - 9,374,808 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247949,358,631 - 9,374,743 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kctd15
604 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1906
Count of miRNA genes:454
Interacting mature miRNAs:559
Transcripts:ENSMUST00000032709, ENSMUST00000108069, ENSMUST00000108070, ENSMUST00000127425, ENSMUST00000155093
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
1301969Lbw5_mlupus NZB x NZW 5 (mouse)Not determined72684761560851775Mouse
38501071Stsl6_mSalmonella typhimurium susceptibility locus 6 (mouse)73419942551149748Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
39128210Lwq19_mliver weight QTL 19 (mouse)73349772758148965Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse
1357469Kidq5_mkidney weight QTL 5 (mouse)Not determined73349772758148965Mouse
7394747asp3_maudiogenic seizure prone 3 (mouse)Not determined72730579836842367Mouse
4142003W3q10_mweight 3 weeks QTL 10 (mouse)Not determined3349772758148965Mouse
12790989Tgl6_mtriglyceride 6 (mouse)72754054961540549Mouse
1559000Ossc1_mosteosarcoma susceptibility 1 (mouse)Not determined73405302568053223Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
1357634Splq7_mspleen weight QTL 7 (mouse)Not determined73349772758148965Mouse
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
1357699Nhdlq6_mnon-HDL QTL 6 (mouse)Not determined7998886743988984Mouse
1300996Aorls2_maortic lesion size 2 (mouse)Not determined73239453266394681Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71248087746480877Mouse
1301709Bdt4_mbone density traits 4 (mouse)Not determined72288857256888716Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
1301041Prnr2_mprion resistance 2 (mouse)Not determined71872879439674033Mouse
12904742Litsq2_mlitter size QTL 2 (mouse)72267388756674033Mouse
1301175Ap7q_malcohol preference 7 QTL (mouse)Not determined73171484565715077Mouse
1301622Eae12_msusceptibility to experimental allergic encephalomyelitis 12 (mouse)Not determined71928001553280104Mouse
11354952Pdcc1_mplasmacytoid dentritic cell compartment 1 (mouse)72306653157066531Mouse
4142102Tailq5_mtail length QTL 5 (mouse)Not determined3349772758148965Mouse
4141909W10q18_mweight 10 weeks QTL 18 (mouse)Not determined3349772758148965Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71248087746480877Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301052Bhr6_mbronchial hyperresponsiveness 6 (mouse)Not determined71984225053842367Mouse
1357883Epfq5_mepididymal fat pad weight QTL 5 (mouse)Not determined73349772758148965Mouse
10045622Heal20_mwound healing/regeneration 20 (mouse)Not determined73431688768317043Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
4142218W6q17_mweight 6 weeks QTL 17 (mouse)Not determined3349772758148965Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1558893Spir1_mStreptococcus pneumoniae infection resistance 1 (mouse)Not determined71030579844305936Mouse
1559016Drsi_mDCC-related Spp1 induction (mouse)Not determined71663729349159331Mouse

Markers in Region
UniSTS:235651  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38734,639,297 - 34,639,463UniSTSGRCm38
MGSCv37735,424,316 - 35,424,482UniSTSGRCm37
Celera729,774,776 - 29,774,942UniSTS
Cytogenetic Map7B1UniSTS
RH127024  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38734,643,926 - 34,644,148UniSTSGRCm38
MGSCv37735,428,945 - 35,429,167UniSTSGRCm37
Celera729,779,406 - 29,779,628UniSTS
Cytogenetic Map7B1UniSTS
cM Map711.0UniSTS
Whitehead/MRC_RH7442.13UniSTS
RH141327  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38734,639,059 - 34,639,239UniSTSGRCm38
MGSCv37735,424,078 - 35,424,258UniSTSGRCm37
Celera729,774,538 - 29,774,718UniSTS
Cytogenetic Map7B1UniSTS


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001360818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001360820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001420858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001420859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001420860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_146188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006539901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006539904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006539905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK034731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW124009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU709637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX649462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000032709   ⟹   ENSMUSP00000032709
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl734,338,444 - 34,354,934 (-)Ensembl
GRCm38.p6 Ensembl734,639,019 - 34,655,509 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108069   ⟹   ENSMUSP00000103704
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl734,338,439 - 34,353,823 (-)Ensembl
GRCm38.p6 Ensembl734,639,014 - 34,654,398 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108070   ⟹   ENSMUSP00000103705
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl734,338,440 - 34,352,262 (-)Ensembl
GRCm38.p6 Ensembl734,639,015 - 34,652,837 (-)Ensembl
Ensembl Acc Id: ENSMUST00000127425
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl734,352,057 - 34,352,451 (-)Ensembl
GRCm38.p6 Ensembl734,652,632 - 34,653,026 (-)Ensembl
Ensembl Acc Id: ENSMUST00000155093
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl734,352,057 - 34,352,737 (-)Ensembl
GRCm38.p6 Ensembl734,652,632 - 34,653,312 (-)Ensembl
Ensembl Acc Id: ENSMUST00000205419
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl734,339,607 - 34,348,169 (-)Ensembl
GRCm38.p6 Ensembl734,640,182 - 34,648,744 (-)Ensembl
Ensembl Acc Id: ENSMUST00000205843
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl734,354,795 - 34,356,157 (-)Ensembl
GRCm38.p6 Ensembl734,655,370 - 34,656,732 (-)Ensembl
Ensembl Acc Id: ENSMUST00000206501   ⟹   ENSMUSP00000145815
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl734,349,412 - 34,353,814 (-)Ensembl
GRCm38.p6 Ensembl734,649,987 - 34,654,389 (-)Ensembl
RefSeq Acc Id: NM_001360818   ⟹   NP_001347747
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39734,336,424 - 34,354,934 (-)NCBI
GRCm38734,636,999 - 34,655,509 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001360820   ⟹   NP_001347749
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39734,336,424 - 34,353,808 (-)NCBI
GRCm38734,636,999 - 34,654,398 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001420858   ⟹   NP_001407787
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39734,336,424 - 34,354,934 (-)NCBI
RefSeq Acc Id: NM_001420859   ⟹   NP_001407788
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39734,336,424 - 34,354,655 (-)NCBI
RefSeq Acc Id: NM_001420860   ⟹   NP_001407789
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39734,336,424 - 34,354,655 (-)NCBI
RefSeq Acc Id: NM_146188   ⟹   NP_666300
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39734,336,424 - 34,352,357 (-)NCBI
GRCm38734,636,999 - 34,652,932 (-)NCBI
MGSCv37735,424,034 - 35,437,860 (-)RGD
Celera729,774,494 - 29,788,312 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006539901   ⟹   XP_006539964
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39734,338,439 - 34,352,520 (-)NCBI
GRCm38734,639,002 - 34,653,096 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006539904   ⟹   XP_006539967
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39734,338,439 - 34,353,635 (-)NCBI
GRCm38734,639,002 - 34,654,214 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006539905   ⟹   XP_006539968
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39734,338,439 - 34,353,863 (-)NCBI
GRCm38734,639,002 - 34,654,408 (-)NCBI
Sequence:
RefSeq Acc Id: NP_666300   ⟸   NM_146188
- UniProtKB: Q8K0E1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006539968   ⟸   XM_006539905
- Peptide Label: isoform X1
- UniProtKB: Q8K0E1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006539967   ⟸   XM_006539904
- Peptide Label: isoform X1
- UniProtKB: Q8K0E1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006539964   ⟸   XM_006539901
- Peptide Label: isoform X1
- UniProtKB: Q8K0E1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001347747   ⟸   NM_001360818
- UniProtKB: Q8K0E1 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001347749   ⟸   NM_001360820
- UniProtKB: Q8K0E1 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000032709   ⟸   ENSMUST00000032709
Ensembl Acc Id: ENSMUSP00000145815   ⟸   ENSMUST00000206501
Ensembl Acc Id: ENSMUSP00000103704   ⟸   ENSMUST00000108069
Ensembl Acc Id: ENSMUSP00000103705   ⟸   ENSMUST00000108070
RefSeq Acc Id: NP_001407787   ⟸   NM_001420858
- UniProtKB: Q8K0E1 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001407789   ⟸   NM_001420860
- UniProtKB: Q8K0E1 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001407788   ⟸   NM_001420859
- UniProtKB: Q8K0E1 (UniProtKB/Swiss-Prot)
Protein Domains
BTB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8K0E1-F1-model_v2 AlphaFold Q8K0E1 1-283 view protein structure

Promoters
RGD ID:8663639
Promoter ID:EPDNEW_M9851
Type:multiple initiation site
Name:Kctd15_1
Description:Mus musculus potassium channel tetramerisation domain containing15 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38734,655,509 - 34,655,569EPDNEW
RGD ID:6841388
Promoter ID:MM_KWN:49999
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   ES_Cell,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000019017,   OTTMUST00000019018,   OTTMUST00000019019
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36735,438,091 - 35,438,982 (-)MPROMDB
RGD ID:6841385
Promoter ID:MM_KWN:50001
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day4,   3T3L1_Day6,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000108069
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36735,439,301 - 35,440,282 (-)MPROMDB
RGD ID:6841386
Promoter ID:MM_KWN:50002
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day3,   Brain,   ES_Cell,   Kidney,   Liver,   Lung
Transcripts:UC009GJG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36735,440,164 - 35,440,664 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2385276 AgrOrtholog
Ensembl Genes ENSMUSG00000030499 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032709 ENTREZGENE
  ENSMUST00000032709.3 UniProtKB/Swiss-Prot
  ENSMUST00000108069 ENTREZGENE
  ENSMUST00000108069.8 UniProtKB/Swiss-Prot
  ENSMUST00000108070 ENTREZGENE
  ENSMUST00000108070.9 UniProtKB/Swiss-Prot
  ENSMUST00000206501.2 UniProtKB/TrEMBL
InterPro BTB/POZ_dom UniProtKB/Swiss-Prot
  KCTD1-15-like_C UniProtKB/Swiss-Prot
  KCTD15_T1-type_BTB UniProtKB/Swiss-Prot
  SKP1/BTB/POZ_sf UniProtKB/Swiss-Prot
  T1-type_BTB UniProtKB/Swiss-Prot
KEGG Report mmu:233107 UniProtKB/Swiss-Prot
MGD MGI:2385276 ENTREZGENE
NCBI Gene 233107 ENTREZGENE
PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN KCTD15 UniProtKB/Swiss-Prot
  POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING UniProtKB/Swiss-Prot
Pfam BTB_2 UniProtKB/Swiss-Prot
  KCTD1-15_CTD UniProtKB/Swiss-Prot
PhenoGen Kctd15 PhenoGen
SMART BTB UniProtKB/Swiss-Prot
Superfamily-SCOP SSF54695 UniProtKB/Swiss-Prot
UniProt A0A0U1RP38_MOUSE UniProtKB/TrEMBL
  KCD15_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE