Cep152 (centrosomal protein 152) - Rat Genome Database

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Gene: Cep152 (centrosomal protein 152) Mus musculus
Analyze
Symbol: Cep152
Name: centrosomal protein 152
RGD ID: 1313323
MGI Page MGI
Description: Predicted to enable protein kinase binding activity. Involved in centriole replication and de novo centriole assembly involved in multi-ciliated epithelial cell differentiation. Located in centrosome and deuterosome. Is expressed in several structures, including brain; lung; pharynx epithelium; sensory organ; and skeleton. Human ortholog(s) of this gene implicated in Seckel syndrome 5 and primary autosomal recessive microcephaly 9. Orthologous to human CEP152 (centrosomal protein 152).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI851464; centrosomal protein of 152 kDa; mKIAA0912; RP23-368I1.2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392125,391,784 - 125,467,081 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2125,405,008 - 125,467,033 (-)EnsemblGRCm39 Ensembl
GRCm382125,549,864 - 125,625,174 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2125,563,088 - 125,625,113 (-)EnsemblGRCm38mm10GRCm38
MGSCv372125,388,824 - 125,450,849 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362125,254,529 - 125,316,554 (-)NCBIMGSCv36mm8
Celera2126,806,562 - 126,871,129 (-)NCBICelera
Cytogenetic Map2F1NCBI
cM Map261.76NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10512203   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15368895  
PMID:15840001   PMID:16141072   PMID:16141073   PMID:20360068   PMID:20598275   PMID:21267068   PMID:21677750   PMID:21737879   PMID:21873635   PMID:23936128   PMID:24240477   PMID:24706806  
PMID:26158450   PMID:26496610   PMID:30068389   PMID:32325033   PMID:35259752  


Genomics

Comparative Map Data
Cep152
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392125,391,784 - 125,467,081 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2125,405,008 - 125,467,033 (-)EnsemblGRCm39 Ensembl
GRCm382125,549,864 - 125,625,174 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2125,563,088 - 125,625,113 (-)EnsemblGRCm38mm10GRCm38
MGSCv372125,388,824 - 125,450,849 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362125,254,529 - 125,316,554 (-)NCBIMGSCv36mm8
Celera2126,806,562 - 126,871,129 (-)NCBICelera
Cytogenetic Map2F1NCBI
cM Map261.76NCBI
CEP152
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381548,729,083 - 48,811,069 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1548,712,928 - 48,811,146 (-)EnsemblGRCh38hg38GRCh38
GRCh371549,030,135 - 49,103,266 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361546,817,640 - 46,890,476 (-)NCBINCBI36Build 36hg18NCBI36
Celera1525,923,760 - 25,996,973 (-)NCBICelera
Cytogenetic Map15q21.1NCBI
HuRef1525,862,141 - 25,935,353 (-)NCBIHuRef
CHM1_11549,148,135 - 49,221,365 (-)NCBICHM1_1
T2T-CHM13v2.01546,536,038 - 46,619,269 (-)NCBIT2T-CHM13v2.0
Cep152
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83133,243,979 - 133,332,271 (-)NCBIGRCr8
mRatBN7.23112,803,185 - 112,878,298 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3112,793,983 - 112,804,069 (-)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl3112,810,425 - 112,878,458 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.03117,822,799 - 117,894,856 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3117,811,504 - 117,819,053 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.03124,347,590 - 124,418,896 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43112,864,055 - 112,929,038 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13112,769,932 - 112,845,608 (-)NCBI
Celera3111,640,652 - 111,735,028 (-)NCBICelera
Cytogenetic Map3q36NCBI
Cep152
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554095,122,325 - 5,210,733 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554095,121,332 - 5,210,729 (+)NCBIChiLan1.0ChiLan1.0
CEP152
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21637,979,566 - 38,052,470 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11542,161,101 - 42,236,378 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01527,665,278 - 27,760,808 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11546,011,447 - 46,084,233 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1546,011,447 - 46,084,233 (-)Ensemblpanpan1.1panPan2
CEP152
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13014,958,537 - 15,047,431 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3014,958,853 - 15,041,835 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3014,880,041 - 14,969,017 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03015,092,265 - 15,181,248 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3015,092,667 - 15,181,209 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13015,015,605 - 15,104,589 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03015,136,420 - 15,225,515 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03015,243,144 - 15,332,133 (-)NCBIUU_Cfam_GSD_1.0
Cep152
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864093,205,044 - 93,285,442 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647111,052,720 - 11,117,327 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647111,052,994 - 11,133,385 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEP152
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1122,876,141 - 122,979,845 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11122,876,146 - 122,979,851 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21136,700,802 - 136,818,062 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CEP152
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12634,473,648 - 34,608,650 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2634,473,757 - 34,546,842 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666048106,581,490 - 106,654,676 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cep152
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473110,900,371 - 10,990,415 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473110,899,654 - 10,990,143 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cep152
4205 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:136
Count of miRNA genes:118
Interacting mature miRNAs:128
Transcripts:ENSMUST00000089776
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301905Lgth2_mbody length 2 (mouse)Not determined2111173704145173821Mouse
1302033Nsv1_mNeuroadapted Sindbis viral RNA level 1 (mouse)Not determined2111623386145623526Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
1301909Smdq2_msegregation of mitochondrial DNA QTL 2 (mouse)Not determined292778465126778607Mouse
11039520Ltpr2h_mLeishmania tropica response 2h (mouse)2112212746146213005Mouse
11039521Ltpr2g_mLeishmania tropica response 2g (mouse)2115212857149212994Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118589253160611165Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294230345154241920Mouse
12910812Pwgrq1_mpre-weaning growth rate QTL 1 (mouse)2118589253160611165Mouse
12910814Pwbwq1_mpre-weaning body weight QTL 1 (mouse)2118589253160611165Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
12904935Edlmmq2_mextensor digitorum longus muscle mass QTL 2 (mouse)297210364131210364Mouse
1302071Fembrs1_mfemur breaking strength 1 (mouse)Not determined2100942930134943090Mouse
10045885Cplaq15_mcircadian period of locomotor activity 15 (mouse)Not determined2110916118154354667Mouse
1302203Gvhd3_mgraft-versus host disease 3 (mouse)Not determined2100942930134943090Mouse
1300793Pcfm2_mperiosteal circumference and femur length 2 (mouse)Not determined2111173704145173821Mouse
10412082Hylaq1_mHyperlocomotor activity related QTL 1 (mouse)Not determined284013198148667470Mouse
1300798Actre3_mactivity response to ethanol 3 (mouse)Not determined2112024987128173821Mouse
1301822Pgia2_mproteoglycan induced arthritis 2 (mouse)Not determined2123937311157937424Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
1301415Actre4_mactivity response to ethanol 4 (mouse)Not determined2112024987128173821Mouse
1301029T2dm3_mtype 2 diabetes mellitus 3 (mouse)Not determined2114288075132714157Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
1301295Prdt1_mprion disease incubation time 1 (mouse)Not determined2116077623150077741Mouse
1301294Hrtfm5_mheart failure modifier 5 (mouse)Not determined2122883015156883131Mouse
12904954Gmmq2_mgastrocnemius muscle mass QTL 2 (mouse)297210364131210364Mouse
11038696Ltpr2f_mLeishmania tropica response 2f (mouse)2115212857149212994Mouse
1301330Tbbmd2_mtotal body bone mineral density 2 (mouse)Not determined2100942930134943090Mouse
1301201Chab1_mcholesterol absorption 1 (mouse)Not determined2111551028145551163Mouse
11038699Ltpr2b_mLeishmania tropica response 2b (mouse)2112212746146213005Mouse
11038700Ltpr2a_mLeishmania tropica response 2a (mouse)2112212746146213005Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
11049568Lmr28c_mleishmaniasis resistance 28c (mouse)297123370131123532Mouse
11049569Lmr28d_mleishmaniasis resistance 28d (mouse)297123370131123532Mouse
11528549Sluc31_msusceptibility to lung cancer 31 (mouse)274524117129213005Mouse
1301087Bbaa15_mB.burgdorferi-associated arthritis 15 (mouse)Not determined2110489658144489807Mouse
1301825Pbrgcsf1_mperipheral blood stem cell response to granulocyte colony stimulating factor 1 (mouse)Not determined2106233580140233729Mouse
4141802Ignpq1_mIgA nephropathy QTL 1 (mouse)Not determined2100824060134824269Mouse
1558990Skmw9_mskeletal muscle weight 9 (mouse)Not determined2111173704145173821Mouse
1301066Otx2m2_morthodenticle homolog 2 (Drosophila) modifier 2 (mouse)Not determined2123231973148700377Mouse
11041906Lmr28a_mleishmaniasis resistance 28a (mouse)2103095716129213005Mouse
4141155Plast2b_mplasma plant sterol 2b (mouse)Not determined284013198148522175Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124441920168241920Mouse
1301755Hrq1_mheart rate quantitative locus 1 (mouse)Not determined2111173704145173821Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
1558881Ses7_msalmonella enteritidis susceptibility 7 (mouse)Not determined2116306330150306474Mouse
10043875Bw25_mbody weight QTL 25 (mouse)Not determined2107255676141255676Mouse
1300712El2_mepilepsy 2 (mouse)Not determined2122207146142532135Mouse

Markers in Region
UniSTS:234515  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382125,563,683 - 125,563,961UniSTSGRCm38
MGSCv372125,389,419 - 125,389,697UniSTSGRCm37
Celera2126,807,157 - 126,807,435UniSTS
Cytogenetic Map2F1UniSTS
AI851464  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382125,563,194 - 125,563,314UniSTSGRCm38
MGSCv372125,388,930 - 125,389,050UniSTSGRCm37
Celera2126,806,668 - 126,806,788UniSTS
Cytogenetic Map2F1UniSTS
Whitehead/MRC_RH21566.08UniSTS
Cep152  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map2F1UniSTS
cM Map261.76UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001081091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006500473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006500474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011239870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011239871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001783212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001783213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001783214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK028650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL928930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL929166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX321866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000089776   ⟹   ENSMUSP00000087208
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2125,405,008 - 125,467,033 (-)Ensembl
GRCm38.p6 Ensembl2125,563,088 - 125,625,113 (-)Ensembl
RefSeq Acc Id: NM_001081091   ⟹   NP_001074560
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392125,405,008 - 125,467,033 (-)NCBI
GRCm382125,563,088 - 125,625,113 (-)NCBI
MGSCv372125,388,824 - 125,450,849 (-)RGD
Celera2126,806,562 - 126,871,129 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006500473   ⟹   XP_006500536
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392125,405,008 - 125,467,064 (-)NCBI
GRCm382125,563,088 - 125,625,147 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006500474   ⟹   XP_006500537
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392125,405,008 - 125,467,065 (-)NCBI
GRCm382125,563,088 - 125,625,148 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011239870   ⟹   XP_011238172
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392125,405,008 - 125,467,066 (-)NCBI
GRCm382125,563,088 - 125,625,149 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011239871   ⟹   XP_011238173
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392125,405,008 - 125,467,065 (-)NCBI
GRCm382125,563,088 - 125,625,148 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319354   ⟹   XP_017174843
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392125,405,008 - 125,467,065 (-)NCBI
GRCm382125,563,088 - 125,625,149 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162756   ⟹   XP_036018649
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392125,405,008 - 125,467,065 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162757   ⟹   XP_036018650
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392125,405,008 - 125,467,065 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162758   ⟹   XP_036018651
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392125,405,008 - 125,467,064 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162760   ⟹   XP_036018653
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392125,405,008 - 125,467,064 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001783212
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392125,391,784 - 125,467,070 (-)NCBI
GRCm382125,549,864 - 125,625,166 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001783213
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392125,405,008 - 125,467,081 (-)NCBI
GRCm382125,563,088 - 125,625,174 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001783214
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392125,405,008 - 125,467,081 (-)NCBI
GRCm382125,563,088 - 125,625,174 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001074560   ⟸   NM_001081091
- UniProtKB: A2AUM9 (UniProtKB/Swiss-Prot),   Q69ZV8 (UniProtKB/Swiss-Prot),   Q8R0X1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006500537   ⟸   XM_006500474
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006500536   ⟸   XM_006500473
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_011238172   ⟸   XM_011239870
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011238173   ⟸   XM_011239871
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017174843   ⟸   XM_017319354
- Peptide Label: isoform X5
- Sequence:
Ensembl Acc Id: ENSMUSP00000087208   ⟸   ENSMUST00000089776
RefSeq Acc Id: XP_036018650   ⟸   XM_036162757
- Peptide Label: isoform X6
RefSeq Acc Id: XP_036018649   ⟸   XM_036162756
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036018653   ⟸   XM_036162760
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036018651   ⟸   XM_036162758
- Peptide Label: isoform X8

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A2AUM9-F1-model_v2 AlphaFold A2AUM9 1-1736 view protein structure

Promoters
RGD ID:6831035
Promoter ID:MM_KWN:31523
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4
Transcripts:NM_001081091,   UC008MCU.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362125,450,584 - 125,451,084 (-)MPROMDB
RGD ID:6878576
Promoter ID:EPDNEW_M2739
Type:multiple initiation site
Name:Cep152_1
Description:Mus musculus centrosomal protein 152 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382125,625,101 - 125,625,161EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2139083 AgrOrtholog
Ensembl Genes ENSMUSG00000068394 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000089776 ENTREZGENE
  ENSMUST00000089776.3 UniProtKB/Swiss-Prot
InterPro CEP152/SHC-Transforming UniProtKB/Swiss-Prot
KEGG Report mmu:99100 UniProtKB/Swiss-Prot
MGD MGI:2139083 ENTREZGENE
NCBI Gene 99100 ENTREZGENE
PANTHER PTHR10337:SF6 UniProtKB/Swiss-Prot
  SHC TRANSFORMING PROTEIN UniProtKB/Swiss-Prot
PhenoGen Cep152 PhenoGen
UniProt A2AUM9 ENTREZGENE, UniProtKB/Swiss-Prot
  Q69ZV8 ENTREZGENE
  Q8R0X1 ENTREZGENE
UniProt Secondary Q69ZV8 UniProtKB/Swiss-Prot
  Q8R0X1 UniProtKB/Swiss-Prot