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Gene: Pbxip1 (pre B cell leukemia transcription factor interacting protein 1) Mus musculus

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Symbol:

Pbxip1

Name:

pre B cell leukemia transcription factor interacting protein 1

RGD ID:

1313055

MGI Page

MGI

Description:

Enables transcription coactivator activity. Acts upstream of or within several processes, including articular cartilage development; extracellular matrix organization; and positive regulation of chondrocyte proliferation. Located in chromatin; cytoplasm; and nucleus. Part of transcription regulator complex. Is expressed in brain; diaphragm; gut; heart ventricle; and spinal cord ventricular layer. Orthologous to human PBXIP1 (PBX homeobox interacting protein 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

4732463H20Rik; hematopoietic PBX-interacting protein; MGC38361; pre-B-cell leukemia transcription factor interacting protein 1; pre-B-cell leukemia transcription factor-interacting protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PBXIP1 (PBX homeobox interacting protein 1)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Pbxip1 (PBX homeobox interacting protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Pbxip1 (PBX homeobox interacting protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PBXIP1 (PBX homeobox interacting protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PBXIP1 (PBX homeobox interacting protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pbxip1 (PBX homeobox interacting protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PBXIP1 (PBX homeobox interacting protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pbxip1 (PBX homeobox interacting protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Pbxip1 (PBX homeobox interacting protein 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PBXIP1 (PBX homeobox interacting protein 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pbxip1b (pre-B-cell leukemia homeobox interacting protein 1b)	Alliance	DIOPT (InParanoid\|OMA\|OrthoInspector\|PANTHER\|ZFIN)
Danio rerio (zebrafish):	pbxip1a (pre-B-cell leukemia homeobox interacting protein 1a)	Alliance	DIOPT (InParanoid\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Xenopus tropicalis (tropical clawed frog):	pip5k1a	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pbxip1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pbxip1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	89,343,982 - 89,358,259 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	89,344,013 - 89,358,259 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	3	89,436,675 - 89,450,952 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	89,436,706 - 89,450,952 (+)	Ensembl			mm10	GRCm38
MGSCv37	3	89,240,626 - 89,254,874 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	3	89,522,674 - 89,534,891 (+)	NCBI		MGSCv36	mm8
Celera	3	89,471,837 - 89,486,283 (+)	NCBI		Celera
Cytogenetic Map	3	F1	NCBI
cM Map	3	39.12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Charcot-Marie-Tooth disease type 2 (ISO)

COVID-19 (ISO)

gastrointestinal stromal tumor (ISO)

immunodeficiency 42 (ISO)

MHC class II deficiency (ISO)

parathyroid carcinoma (ISO)

severe congenital neutropenia 3 (ISO)

severe congenital neutropenia 5 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-demecolcine (ISO)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,6-dinitrotoluene (ISO)

3-chloropropane-1,2-diol (ISO)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (EXP)

acrolein (ISO)

acrylamide (ISO)

actinomycin D (ISO)

alpha-pinene (ISO)

amphetamine (ISO)

aristolochic acid A (ISO)

Aroclor 1254 (EXP)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (ISO)

bisphenol AF (ISO)

Bisphenol B (ISO)

butanal (ISO)

carbon nanotube (EXP)

chlordecone (EXP)

cisplatin (ISO)

clobetasol (EXP)

clofibrate (EXP)

cobalt dichloride (ISO)

copper(II) chloride (ISO)

corosolic acid (ISO)

coumarin (ISO)

cyclosporin A (ISO)

DDE (ISO)

deoxynivalenol (ISO)

dibutyl phthalate (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

endosulfan (ISO)

ethanol (EXP)

ethyl methanesulfonate (ISO)

flutamide (ISO)

formaldehyde (ISO)

gentamycin (ISO)

glafenine (ISO)

indole-3-methanol (ISO)

inulin (EXP)

irinotecan (ISO)

ivermectin (ISO)

lead diacetate (ISO)

leflunomide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methamphetamine (EXP)

methyl methanesulfonate (ISO)

N-methyl-4-phenylpyridinium (EXP)

N-nitrosodiethylamine (ISO)

nefazodone (ISO)

niclosamide (ISO)

nimesulide (ISO)

Nutlin-3 (ISO)

okadaic acid (ISO)

ozone (ISO)

paracetamol (EXP)

paraquat (ISO)

pentanal (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (EXP)

perfluorooctanoic acid (ISO)

potassium dichromate (ISO)

propiconazole (EXP)

rotenone (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

Soman (ISO)

sunitinib (ISO)

tetrachloromethane (EXP,ISO)

thioacetamide (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

triptonide (EXP)

tungsten (EXP)

urethane (ISO)

valproic acid (EXP,ISO)

vincristine (ISO)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

articular cartilage development (IMP)

cell adhesion (IMP)

cell migration (IMP)

extracellular matrix disassembly (IMP)

gene expression (IMP)

gene expression involved in extracellular matrix organization (IMP)

hemopoiesis (IEA)

negative regulation of DNA-templated transcription (IEA,ISO)

positive regulation of chondrocyte proliferation (IMP)

positive regulation of DNA-templated transcription (IDA,IMP)

positive regulation of Wnt signaling pathway (IDA,IMP)

production of molecular mediator involved in inflammatory response (IMP)

regulation of DNA-templated transcription (IBA)

Cellular Component

chromatin (IDA)

cytoplasm (IDA,IEA,IPI)

cytoskeleton (IEA)

cytosol (IEA,ISO)

microtubule (IEA)

nucleoplasm (IEA,ISO)

nucleus (IBA,IDA,IEA,IPI,ISO)

transcription regulator complex (IDA)

Molecular Function

DNA-binding transcription factor binding (IEA,ISO)

protein binding (IPI)

transcription coactivator activity (IDA,IMP)

transcription coregulator activity (IBA)

transcription corepressor activity (IEA,ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal long bone epiphyseal plate proliferative zone (IAGP)

decreased susceptibility to injury (IAGP)

increased width of hypertrophic chondrocyte zone (IAGP)

osteoarthritis (IAGP)

proportional dwarf (IAGP)

short femur (IAGP)

short humerus (IAGP)

short lumbar vertebrae (IAGP)

short radius (IAGP)

short tibia (IAGP)

short ulna (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:12904583	PMID:14610273	PMID:15782199	PMID:16141072
PMID:16141073	PMID:18799693	PMID:20059953	PMID:20211142	PMID:21267068	PMID:21362171	PMID:21873635	PMID:22383461	PMID:28378742	PMID:29530978	PMID:30550785	PMID:30659184
PMID:32554809	PMID:32581705	PMID:34668648	PMID:37142655

Genomics

Comparative Map Data

Pbxip1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	89,343,982 - 89,358,259 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	89,344,013 - 89,358,259 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	3	89,436,675 - 89,450,952 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	89,436,706 - 89,450,952 (+)	Ensembl			mm10	GRCm38
MGSCv37	3	89,240,626 - 89,254,874 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	3	89,522,674 - 89,534,891 (+)	NCBI		MGSCv36	mm8
Celera	3	89,471,837 - 89,486,283 (+)	NCBI		Celera
Cytogenetic Map	3	F1	NCBI
cM Map	3	39.12	NCBI

PBXIP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	154,944,080 - 154,956,099 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	154,944,076 - 154,956,123 (-)	Ensembl			hg38	GRCh38
GRCh37	1	154,916,556 - 154,928,575 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	153,183,180 - 153,195,191 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	1	151,729,633 - 151,741,640	NCBI
Celera	1	127,987,581 - 127,999,592 (-)	NCBI		Celera
Cytogenetic Map	1	q21.3	NCBI
HuRef	1	126,278,515 - 126,290,312 (-)	NCBI		HuRef
CHM1_1	1	156,312,931 - 156,324,942 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	154,083,441 - 154,095,460 (-)	NCBI		T2T-CHM13v2.0

Pbxip1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	177,154,056 - 177,167,810 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	177,154,101 - 177,167,328 (+)	Ensembl				GRCr8
mRatBN7.2	2	174,856,339 - 174,868,922 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	174,856,397 - 174,868,919 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	182,004,596 - 182,014,488 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	180,026,979 - 180,036,873 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	174,627,670 - 174,637,584 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	188,763,887 - 188,776,445 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	188,766,535 - 188,776,439 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	208,178,170 - 208,190,545 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	181,637,864 - 181,647,769 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	168,799,890 - 168,809,795 (+)	NCBI		Celera
RGSC_v3.1	2	181,588,004 - 181,597,102 (+)	NCBI
Cytogenetic Map	2	q34	NCBI

Pbxip1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955545	1,452,395 - 1,462,639 (-)	Ensembl
ChiLan1.0	NW_004955545	1,451,541 - 1,467,856 (-)	NCBI	ChiLan1.0	ChiLan1.0

PBXIP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	94,884,335 - 94,896,388 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	94,616,461 - 94,628,146 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	130,292,611 - 130,304,667 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	133,901,986 - 133,917,204 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

PBXIP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	42,514,306 - 42,524,056 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	42,514,423 - 42,523,585 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	42,005,410 - 42,015,141 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	42,384,478 - 42,394,201 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	42,384,551 - 42,394,199 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	42,164,169 - 42,173,891 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	42,217,778 - 42,227,492 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	42,501,362 - 42,511,085 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Pbxip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	25,465,730 - 25,475,619 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	4,495,099 - 4,503,252 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	4,496,112 - 4,505,968 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PBXIP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	8,872,492 - 8,884,029 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	8,872,409 - 8,884,450 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	8,207,573 - 8,219,598 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pbxip1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624885	2,528,222 - 2,535,795 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624885	2,526,072 - 2,535,618 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Pbxip1
793 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	1699
Count of miRNA genes:	673
Interacting mature miRNAs:	841
Transcripts:	ENSMUST00000038942, ENSMUST00000130858, ENSMUST00000141340, ENSMUST00000145753, ENSMUST00000146630
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1301971	Cia5_m	collagen induced arthritis QTL 5 (mouse)			Not determined		3	66046658	100046795	Mouse
4142399	Aec1_m	autoimmune exocrinopathy 1 (mouse)			Not determined			7586174	102690034	Mouse
26884378	Skwq6_m	skull length QTL 6, 10 week (mouse)					3	51907421	102307316	Mouse
1301904	Iba2_m	induction of brown adipocytes 2 (mouse)			Not determined		3	82147043	116147184	Mouse
1301392	Eae3_m	susceptibility to experimental allergic encephalomyelitis 3 (mouse)			Not determined		3	79548730	113548837	Mouse
11041900	Lmr11a_m	leishmaniasis resistance 11a (mouse)					3	83463991	117464137	Mouse
26884382	Bzwq1_m	bi-zygomatic width QTL 1, 5 week (mouse)					3	52207421	137205761	Mouse
26884380	Skwq1_m	skull length QTL 1, 5 week (mouse)					3	43954435	101607316	Mouse
14746984	Manh54_m	mandible shape 54 (mouse)					3	85289152	119289152	Mouse
12738440	Twq3_m	testis weight QTL 3 (mouse)					3	87228015	121228015	Mouse
1301272	Cfsw1_m	cystic fibrosis survival to weaning 1 (mouse)			Not determined		3	83882912	117883044	Mouse
25314313	Syncl1_m	synaptonemal complex length 1 (mouse)					3	67907333	128393649	Mouse
1301791	Char4_m	P. chabaudi malaria resistance QTL 4 (mouse)			Not determined		3	69625509	100655290	Mouse
11049572	Lmr11c_m	leishmaniasis resistance 11c (mouse)					3	72139967	106140094	Mouse
26884436	Zlq3_m	zygomatic length QTL 3, 10 week (mouse)					3	3265060	142405761	Mouse
4141294	Bmd24_m	bone mineral density 24 (mouse)			Not determined		3	61740061	95740241	Mouse
26884427	Cvht4_m	cranial vault height 4, 10 week (mouse)					3	16054164	109707316	Mouse
1301705	Sles3_m	systemic lupus erythmatosus suppressor 3 (mouse)			Not determined		3	37174862	143353183	Mouse
1357583	Sle18_m	systematic lupus erythematosus susceptibility 18 (mouse)			Not determined		3	87208904	125316236	Mouse
13207570	Tcq12_m	total cholesterol QTL 12 (mouse)					3	16504164	130163649	Mouse
26884422	Cvht7_m	cranial vault height 7, 16 week (mouse)					3	28954149	118893649	Mouse
4142178	Ctrq2_m	C. trachomatis resistance QTL 2 (mouse)			Not determined		3	89139967	137453008	Mouse
1300595	Tmevd2_m	Theiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 2 (mouse)			Not determined		3	75463302	109463549	Mouse
11251721	Ewc3_m	ethanol withdrawal and consumption 3 (mouse)					3	69568554	103568554	Mouse
1300982	Lmr11_m	leishmaniasis resistance 11 (mouse)			Not determined		3	72139967	106140094	Mouse
12880419	V125Dq4_m	vitamin D active form serum level QTL 4 (mouse)					3	58907307	92907307	Mouse
1301947	Pcfm3_m	periosteal circumference and femur length 3 (mouse)			Not determined		3	81084652	115084797	Mouse
4142099	Cq3_m	cholesterol QTL 3 (mouse)			Not determined		3	84888918	118889067	Mouse
11039512	Ltpr3b_m	Leishmania tropica response 3b (mouse)					3	83463991	117464137	Mouse
11039519	Ltpr3_m	Leishmania tropica response 3 (mouse)					3	56704102	100464137	Mouse
1302056	Orgwq4_m	organ weight QTL 4 (mouse)			Not determined		3	30067588	147304689	Mouse
11039507	Ltpr3g_m	Leishmania tropica response 3g (mouse)					3	83463991	117464137	Mouse
11039508	Ltpr3f_m	Leishmania tropica response 3f (mouse)					3	83463991	117464137	Mouse
1301422	Sle11_m	systematic lupus erythematosus susceptibility 11 (mouse)			Not determined		3	70208904	104209042	Mouse
11039509	Ltpr3e_m	Leishmania tropica response 3e (mouse)					3	83463991	117464137	Mouse
11039510	Ltpr3d_m	Leishmania tropica response 3d (mouse)					3	83463991	117464137	Mouse
11039511	Ltpr3c_m	Leishmania tropica response 3c (mouse)					3	83463991	117464137	Mouse
13208566	Bmiq5_m	body mass index QTL 5 (mouse)					3	40954435	115793649	Mouse

Markers in Region

UniSTS:234737

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	3	89,434,735 - 89,434,917	UniSTS	GRCm38
MGSCv37	3	89,238,657 - 89,238,839	UniSTS	GRCm37
Celera	3	89,469,868 - 89,470,050	UniSTS
Cytogenetic Map	3	F1	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_146131	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006501351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006501352	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006501353	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC171273	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK028754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK028858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK047898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK081345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK143270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK160103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK170318	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK182600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK182870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK184900	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK189297	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK191667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK191999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK195682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK204849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK213394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK219070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC026838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC027771	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC034200	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CD742482	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000038942 ⟹ ENSMUSP00000040429

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	89,344,013 - 89,358,259 (+)	Ensembl
GRCm38.p6 Ensembl	3	89,436,706 - 89,450,952 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000130858 ⟹ ENSMUSP00000118496

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	89,344,022 - 89,353,468 (+)	Ensembl
GRCm38.p6 Ensembl	3	89,436,715 - 89,446,161 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000141340

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	89,344,019 - 89,352,829 (+)	Ensembl
GRCm38.p6 Ensembl	3	89,436,712 - 89,445,522 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000145753 ⟹ ENSMUSP00000121658

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	89,344,063 - 89,352,821 (+)	Ensembl
GRCm38.p6 Ensembl	3	89,436,756 - 89,445,514 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000146630 ⟹ ENSMUSP00000115904

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	89,344,061 - 89,352,777 (+)	Ensembl
GRCm38.p6 Ensembl	3	89,436,754 - 89,445,470 (+)	Ensembl

RefSeq Acc Id:

NM_146131 ⟹ NP_666243

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	89,344,011 - 89,358,259 (+)	NCBI
GRCm38	3	89,436,704 - 89,450,952 (+)	NCBI
MGSCv37	3	89,240,626 - 89,254,874 (+)	RGD
Celera	3	89,471,837 - 89,486,283 (+)	RGD
cM Map	3		ENTREZGENE

Sequence:

show sequence

GTGACTCCCCTCTTGTCTTCCTGGGCTGGGAGGTTGCAACAAGTTAAGCTGAAGACTGAAGCGA
GGAGCTGGGTCAGGTGGCCACTCTAGCTGCACTGGACCTCCACAACTATGGCCTCCTGCCCAGA
CTCAGATAATAGCTGGGTGCTCGCTGGTTCTGAGAATCTGCCTGTGGAGACTCTGGGCCCAGAA
CCCAGGATGGACCCAGAATCTGAGGGAGCCTCCCAGGCCCTTCGGGACTCCTCCAAGGCAGATG
GCAAAGAATTAGCTGGGACCTTGGATGGAGAAGAGAAGCTTTTCCAGACGGAAAGTTCCCAGAG
AGAAACTGCTGTTCTGACAGAGTCTGCGGCCAAGGGCACTCTGGGAGCCGATGGTCATGGGACG
GAGGCCCCTGGAGACACAGTGGTCCAGGAAGATTCGCAGGAGACTCCTGTGGCGACGAGCCTCG
GACCAGACACACAGGACCTGGAGAGTGAGATCCATCCACAGAACTTACCCTCCAGTCCCAGAGC
AGTTTGGAAAGAGCATCGCTGCTCCAGCAGTGACGACGACACTGATGTAGATGTGGAGGGTCTG
CGGAGACGGAGGGGCCGGGAGCCCAGCTCATCCCAGCCCGTGGTACCCGTAGATGTGGAGGACC
AGGCCAAGGGCGAGGGTATAGGTGGAGAGCTGGGCATCTCCCTCAACATGTGTTTCCTGGGGGC
CCTGGTTCTTCTGGGCCTGGGGATCCTCCTGTTCTCTGGTACACTGCTGGAGCCCGAGACTGGG
CCCATGGAGGAAGCCGAGTTGCAGGTCTTTCCAGAAACCGGGCCGGAGACTGAACTGGTAGAGA
CTCTGGGGAACAGGCAGGATGAGATAGAGCACCTGCAGGCTTCAAGTGTCCCACCAGACAGTGT
CCCCAGCCTGCAGAGCATGGGGTTTCTGCTGGACAAGCTGGCCAAGGAGAACCAGGATATCCGG
CTGCTGCAGGCTCAGCTACAGGCTCAGAAAGAAGAACTTCAGAGCCTGTTGCACCAGCCCAAAG
GGCTGGAGGAGGAGAATGCCCGGCTCCGGGAAGCCCTGCAGCAGGGCAAGACCTCCCACCAGGC
CCTAGAATCAGAACTGCAGCAGCTAAGGGCCCGACTCCAAGGGCTAGAGGCTAACTGTGTCCGG
GGTGTAGATGGGGTGTGTCTCAACTGGGGTGGAGATCCACAGGATGGCAAGGCCACTAAAGAAC
AAGGCCACAAGGGGCAGGAGCCAGACCCCAGCTTATTGGAGCAGCATAAGCAGCTTGAGGCGGA
GGCCAAGGCCCTAAGGCAGGAGCTGCAGAGACAGTGGCAGCTGCTGGGGTCTGTGCACTGGGAC
CTGCAGAGGGGCTTGCGGGATGCTGGCCGGGGAGCCCCAGCTCACCCTGGCCTGGCTGAACTCG
GTCACATGTTGGCCCAGACACTGCAGGACCTCGAGAATCAGGGTATCAACACTGGCAGGTCCCC
CAATGACTCGGAGGCCTGGCACCAGAAGAAGCCTCACACCCAGAGTCCCAGGGAGTGGGGTGGG
AAGGAGAAGTGGCGCGGTGGGCAGAGGGATCAGAAGGCTGAGCACTGGAAGCCGAGGAAGGAGG
AGTCTGGCCAGGAGAGGCAAAGGAGCTGGAGGGATGAGGGCCGGGAGCACACTGGGCGCTGGAG
GGAGGACAGACTGCGGGCGGACGAATCTGGGAGCAGAAAGGACAGCAAGCGACAGGACCCCAAG
GTACACCCTAGGAAAGATGGGAACTCCCATTCTGTAGAAAGGCAGAAGCATTCTTGGGGGAAAG
ACAACAGCCCTGACGCCCTGTCCTCCTGGGAGGAGCTGCTGAGGCGCAAGTACCGACCCCCTCA
GGGCTGTTCAGGTGTGGCCGACTGTGCCCGGCAGGAGGGCCTGGCCCTCTTTGGTGTGGAGCTG
GCCCCTGTGCGGCAGCAGGAGCTGGCCTCTGTGCTGAGAGAATACTTGTCTCGGCTGCCCTGGG
CCGGGCAGCTGACCAAACAGCTGCCCCTCTCACCTGCTTACTTTGGAGAAGATGGCATCTTCAG
GCATGACCGGCTTCGCTTCAGAGATTTTGTGGATGCCTTGGAGGACAGCCTGGAGGAGGTGGCA
CTGAAACAGACAGGCGACGATGATGAAGTGGATGACTTTGAGGACTTTGTCTTCGGCCACTTCT
TTGGGGACAAGGCCCTGAAGAAGAGGTCACGAAAGAAGGAGAAGCACTCCTGGAACCCCAGAGT
TGTGGGGCCCAGGGAAGAGCACAGCCGCCATCCGCACCACTACCACCAAGGCTGAGCCCTGTCC
TGCTGCAACAGCCGGCCTTGGCATGCACCCAGCTCAAGATGCCTGGAGTTATGTGACCCTAGCA
GCTATGCTCCCACTGTCCAGCGGGCCCCTCCTGGCTCGTTGGTGCCCTTGAATGACCTTCACAG
AAGAGAGCAACGCACTTGGCCCTGCACTGGTACCACTTTTGCTAAAAAAAAAAAAAAAAAAGAA
GAAGAAGAAAAAAAAAAAGGCCATAGTTGGCGCTGCTGAACTGTCTAAGCAGACATATGCAAAG
ATAAAGGCCCTGGGTACTAAGTGACATGTAGGGGCCTGCTGGGAGCCTGCTGGGGAGGACTCTT
ATTCTGAAGTCAGAGAGCTGTCATTTTTTTGTGGCTATCCTGGGTCCACAGCAGAGCCTATCAC
CCTGTGCTAGAGCTGCTGGTTAGAGACTTAGCTCCAGACTTGCCTTGGGGTTTAGCTAGCTGTG
GAGACAGCTATCCCTAAGCCTGAGGAGTCCTCACCATGCCTCTTGCGGCTTTCACCTCCCCACC
TGAGCTGTCCCACCATGGCGGGGCTCTGTCACTTGAGGTGGTCCCTAAATGCAAGGAACACCTT
GCAGTCACCACGCTGGTGTTTAGGCACAATCTAGGCACTGCACTCGGCCTTCCCATCCATTCCC
CATGTGCGCCCACCTTCCCCAAGGAGCCTAGCCTTGAGTCCAGCCACCAATTGTCTCACAGTCC
AGGTGGGGTGGCCTCAAGCCAGGTCATTCTCCGCAGTGTGGTGTGGTGTTCTTATCCTCAGAAA
GAGAGCTGAAGGGAATGGAGTCAGTGAAGCAAGGAAGCAGACATTCTGTTTCTGCCACACAAGA
ATCGATCCCTTTTTTGGAGCGTGCTGTGGAGGACAGGGAACACGCTAACCTGGGTCTGCAGAGG
TGAGGGAGCCACTAGGTGGCGCTCTGGCTTCACATTTCTCTAGACTTCTCCCTCCTGCCCCTGG
TCACCACCCCACACCCCAGACACCCTACCCATTGACTAGCTCTCAAGAATTCCCAGAATCCCCC
TGGTTATTCTTCAGGAACGCCCCGCCCCCTCAGTTCAAACCTCTACGCCATTGGTAGCACACTG
GGCTTCTAGCTCTGGAACTCTCCCAGGGACTCTAGGGGGCAGTGACCACACAGGTCAGGTCAAT
TAAGGAGGGGATTAAGGACTGTAAGCTTACTGGGCAATGGTGATGCACGCCTTTAATCCCAGCC
CTTGGGAGGCAGAGGCAGGCTGATTTCTGAGTTTGAGGCCAGCCTGATCTACAAAGTGAGTTCC
AGGATAGCCAGGGAAACAAAACAGGACTGTAGGCTCTAGAAAGTGCTGGAATCGATTTTGAATT
ATTTAGCAATGCTTTTATGTCACTGTTAAAAGGCTTTTAAGTGCAGTGGCTTGTTTAATTTCCG
TGCTAGACAAGACAGGTAGAAAGGGTGGCTCATTCCACAAATGTTTAAACAGTCTGCTGTGTGG
TGCTGGAGGGATGGCTCAGCCGCTGAGGGCACAGGCTGCTCTTCCAGAAGCCCCAGGTTTGATT
CCCAGCACCCACATGGTAGCTCACAAATGTCTGCAACTTCAGTCTCCAGGGATCTGATGTTCTC
TTCTGGCCCTGTAGGCACCAGGCACACACACACACGGTACACAAACATACACGCAAAAACAAAA
AAAGATCACCCATCACCACATTTCTTGAAAATAAAAGTCTATTGTGTATGAGAACCAGGTAGTG
AGGCCCTAGGCCTGTAGACCCTTTAATATGCATGGAATCTGCAGCAGCAGGAGCTCTGGTTAGA
CTTAAGGCACATTACCTTACACAGGTCAGTGTTGTAGGCTGGGGGCTCCAGGAAGGAGCCGTCT
GGTTTAGAAAGACAATTATATTCCCTGTCTCTCTGGACCAGTGTCCCTCAGAAGGAAGGCAGGT
TTAACCCTGCTTTTGCTGCTCACTCAAGGGTCCTCAGAGATCGATCTGTTTATACAGATGTGGT
GACCTTGGTGGCTGGGTGAAAGCTCAAGGCCGGAGGCAGGTAGGCTGGCATGTTGGGGTGCTGG
GTCTGGAGATGGGGATTCACAGGCCTGCCTTGGTTTCCTAGATGGTGTTGGTACAGGGCTCTCT
GGCCTCTGGTTTCCATGTCAAGAGCTCATGTTGGATAATAAATTTTGGAGTCTCAGAGTTCCTC
T

hide sequence

RefSeq Acc Id:

XM_006501351 ⟹ XP_006501414

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	89,343,982 - 89,358,254 (+)	NCBI
GRCm38	3	89,436,675 - 89,450,944 (+)	NCBI

Sequence:

show sequence

CGACTTTTCACTGGTCAAACACTAGCCACGTGACTCCCCTCTTGTCTTCCTGGGCTGGGAGGTT
GCAACAAGTTAAGCTGAAGACTGAAGCGAGGAGCTGGGTCAGGTGGCCACTCTAGCTGCACTGG
ACCTCCACAACTATGGCCTCCTGCCCAGACTCAGATAATAGCTGGGTGCTCGCTGGTTCTGAGT
TCTCATCTCCCTCTGGCCAGAATCTGCCTGTGGAGACTCTGGGCCCAGAACCCAGGATGGACCC
AGAATCTGAGGGAGCCTCCCAGGCCCTTCGGGACTCCTCCAAGGCAGATGGCAAAGAATTAGCT
GGGACCTTGGATGGAGAAGAGAAGCTTTTCCAGACGGAAAGTTCCCAGAGAGAAACTGCTGTTC
TGACAGAGTCTGCGGCCAAGGGCACTCTGGGAGCCGATGGTCATGGGACGGAGGCCCCTGGAGA
CACAGTGGTCCAGGAAGATTCGCAGGAGACTCCTGTGGCGACGAGCCTCGGACCAGACACACAG
GACCTGGAGAGTGAGATCCATCCACAGAACTTACCCTCCAGTCCCAGAGCAGTTTGGAAAGAGC
ATCGCTGCTCCAGCAGTGACGACGACACTGATGTAGATGTGGAGGGTCTGCGGAGACGGAGGGG
CCGGGAGCCCAGCTCATCCCAGCCCGTGGTACCCGTAGATGTGGAGGACCAGGCCAAGGGCGAG
GGTATAGGTGGAGAGCTGGGCATCTCCCTCAACATGTGTTTCCTGGGGGCCCTGGTTCTTCTGG
GCCTGGGGATCCTCCTGTTCTCTGGTACACTGCTGGAGCCCGAGACTGGGCCCATGGAGGAAGC
CGAGTTGCAGGTCTTTCCAGAAACCGGGCCGGAGACTGAACTGGTAGAGACTCTGGGGAACAGG
CAGGATGAGATAGAGCACCTGCAGGCTTCAAGTGTCCCACCAGACAGTGTCCCCAGCCTGCAGA
GCATGGGGTTTCTGCTGGACAAGCTGGCCAAGGAGAACCAGGATATCCGGCTGCTGCAGGCTCA
GCTACAGGCTCAGAAAGAAGAACTTCAGAGCCTGTTGCACCAGCCCAAAGGGCTGGAGGAGGAG
AATGCCCGGCTCCGGGAAGCCCTGCAGCAGGGCAAGACCTCCCACCAGGCCCTAGAATCAGAAC
TGCAGCAGCTAAGGGCCCGACTCCAAGGGCTAGAGGCTAACTGTGTCCGGGGTGTAGATGGGGT
GTGTCTCAACTGGGGTGGAGATCCACAGGATGGCAAGGCCACTAAAGAACAAGGCCACAAGGGG
CAGGAGCCAGACCCCAGCTTATTGGAGCAGCATAAGCAGCTTGAGGCGGAGGCCAAGGCCCTAA
GGCAGGAGCTGCAGAGACAGTGGCAGCTGCTGGGGTCTGTGCACTGGGACCTGCAGAGGGGCTT
GCGGGATGCTGGCCGGGGAGCCCCAGCTCACCCTGGCCTGGCTGAACTCGGTCACATGTTGGCC
CAGACACTGCAGGACCTCGAGAATCAGGGTATCAACACTGGCAGGTCCCCCAATGACTCGGAGG
CCTGGCACCAGAAGAAGCCTCACACCCAGAGTCCCAGGGAGTGGGGTGGGAAGGAGAAGTGGCG
CGGTGGGCAGAGGGATCAGAAGGCTGAGCACTGGAAGCCGAGGAAGGAGGAGTCTGGCCAGGAG
AGGCAAAGGAGCTGGAGGGATGAGGGCCGGGAGCACACTGGGCGCTGGAGGGAGGACAGACTGC
GGGCGGACGAATCTGGGAGCAGAAAGGACAGCAAGCGACAGGACCCCAAGGTACACCCTAGGAA
AGATGGGAACTCCCATTCTGTAGAAAGGCAGAAGCATTCTTGGGGGAAAGACAACAGCCCTGAC
GCCCTGTCCTCCTGGGAGGAGCTGCTGAGGCGCAAGTACCGACCCCCTCAGGGCTGTTCAGGTG
TGGCCGACTGTGCCCGGCAGGAGGGCCTGGCCCTCTTTGGTGTGGAGCTGGCCCCTGTGCGGCA
GCAGGAGCTGGCCTCTGTGCTGAGAGAATACTTGTCTCGGCTGCCCTGGGCCGGGCAGCTGACC
AAACAGCTGCCCCTCTCACCTGCTTACTTTGGAGAAGATGGCATCTTCAGGCATGACCGGCTTC
GCTTCAGAGATTTTGTGGATGCCTTGGAGGACAGCCTGGAGGAGGTGGCACTGAAACAGACAGG
CGACGATGATGAAGTGGATGACTTTGAGGACTTTGTCTTCGGCCACTTCTTTGGGGACAAGGCC
CTGAAGAAGAGGTCACGAAAGAAGGAGAAGCACTCCTGGAACCCCAGAGTTGTGGGGCCCAGGG
AAGAGCACAGCCGCCATCCGCACCACTACCACCAAGGCTGAGCCCTGTCCTGCTGCAACAGCCG
GCCTTGGCATGCACCCAGCTCAAGATGCCTGGAGTTATGTGACCCTAGCAGCTATGCTCCCACT
GTCCAGCGGGCCCCTCCTGGCTCGTTGGTGCCCTTGAATGACCTTCACAGAAGAGAGCAACGCA
CTTGGCCCTGCACTGGTACCACTTTTGCTAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAAAAAA
AAAAGGCCATAGTTGGCGCTGCTGAACTGTCTAAGCAGACATATGCAAAGATAAAGGCCCTGGG
TACTAAGTGACATGTAGGGGCCTGCTGGGAGCCTGCTGGGGAGGACTCTTATTCTGAAGTCAGA
GAGCTGTCATTTTTTTGTGGCTATCCTGGGTCCACAGCAGAGCCTATCACCCTGTGCTAGAGCT
GCTGGTTAGAGACTTAGCTCCAGACTTGCCTTGGGGTTTAGCTAGCTGTGGAGACAGCTATCCC
TAAGCCTGAGGAGTCCTCACCATGCCTCTTGCGGCTTTCACCTCCCCACCTGAGCTGTCCCACC
ATGGCGGGGCTCTGTCACTTGAGGTGGTCCCTAAATGCAAGGAACACCTTGCAGTCACCACGCT
GGTGTTTAGGCACAATCTAGGCACTGCACTCGGCCTTCCCATCCATTCCCCATGTGCGCCCACC
TTCCCCAAGGAGCCTAGCCTTGAGTCCAGCCACCAATTGTCTCACAGTCCAGGTGGGGTGGCCT
CAAGCCAGGTCATTCTCCGCAGTGTGGTGTGGTGTTCTTATCCTCAGAAAGAGAGCTGAAGGGA
ATGGAGTCAGTGAAGCAAGGAAGCAGACATTCTGTTTCTGCCACACAAGAATCGATCCCTTTTT
TGGAGCGTGCTGTGGAGGACAGGGAACACGCTAACCTGGGTCTGCAGAGGTGAGGGAGCCACTA
GGTGGCGCTCTGGCTTCACATTTCTCTAGACTTCTCCCTCCTGCCCCTGGTCACCACCCCACAC
CCCAGACACCCTACCCATTGACTAGCTCTCAAGAATTCCCAGAATCCCCCTGGTTATTCTTCAG
GAACGCCCCGCCCCCTCAGTTCAAACCTCTACGCCATTGGTAGCACACTGGGCTTCTAGCTCTG
GAACTCTCCCAGGGACTCTAGGGGGCAGTGACCACACAGGTCAGGTCAATTAAGGAGGGGATTA
AGGACTGTAAGCTTACTGGGCAATGGTGATGCACGCCTTTAATCCCAGCCCTTGGGAGGCAGAG
GCAGGCTGATTTCTGAGTTTGAGGCCAGCCTGATCTACAAAGTGAGTTCCAGGATAGCCAGGGA
AACAAAACAGGACTGTAGGCTCTAGAAAGTGCTGGAATCGATTTTGAATTATTTAGCAATGCTT
TTATGTCACTGTTAAAAGGCTTTTAAGTGCAGTGGCTTGTTTAATTTCCGTGCTAGACAAGACA
GGTAGAAAGGGTGGCTCATTCCACAAATGTTTAAACAGTCTGCTGTGTGGTGCTGGAGGGATGG
CTCAGCCGCTGAGGGCACAGGCTGCTCTTCCAGAAGCCCCAGGTTTGATTCCCAGCACCCACAT
GGTAGCTCACAAATGTCTGCAACTTCAGTCTCCAGGGATCTGATGTTCTCTTCTGGCCCTGTAG
GCACCAGGCACACACACACACGGTACACAAACATACACGCAAAAACAAAAAAAGATCACCCATC
ACCACATTTCTTGAAAATAAAAGTCTATTGTGTATGAGAACCAGGTAGTGAGGCCCTAGGCCTG
TAGACCCTTTAATATGCATGGAATCTGCAGCAGCAGGAGCTCTGGTTAGACTTAAGGCACATTA
CCTTACACAGGTCAGTGTTGTAGGCTGGGGGCTCCAGGAAGGAGCCGTCTGGTTTAGAAAGACA
ATTATATTCCCTGTCTCTCTGGACCAGTGTCCCTCAGAAGGAAGGCAGGTTTAACCCTGCTTTT
GCTGCTCACTCAAGGGTCCTCAGAGATCGATCTGTTTATACAGATGTGGTGACCTTGGTGGCTG
GGTGAAAGCTCAAGGCCGGAGGCAGGTAGGCTGGCATGTTGGGGTGCTGGGTCTGGAGATGGGG
ATTCACAGGCCTGCCTTGGTTTCCTAGATGGTGTTGGTACAGGGCTCTCTGGCCTCTGGTTTCC
ATGTCAAGAGCTCATGTTGGATAATAAATTTTGGAGTCTCAGAGTT

hide sequence

RefSeq Acc Id:

XM_006501352 ⟹ XP_006501415

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	89,344,024 - 89,358,254 (+)	NCBI
GRCm38	3	89,436,746 - 89,450,944 (+)	NCBI

Sequence:

show sequence

TGTCTTCCTGGGCTGGGAGGTTGCAACAAGTTAAGCTGAAGACTGAAGCGAGGAGCTGGGTCAG
GTAAAGGAGTCCTTGCCGGGAAGGGGCGTTACAGACTCCCACTTTATCCCCAGATAACAAAAGA
GGGCAAAGCTGTATAAAAGGAGTGGGCAGCCCCGGCGTCCACATACTGCCCAACACAGGACCGA
AGGGCGGGGAAGGAGGGAGACAGATGATTCCGAAGCAGGAACTCAGGTGGCCACTCTAGCTGCA
CTGGACCTCCACAACTATGGCCTCCTGCCCAGACTCAGATAATAGCTGGGTGCTCGCTGGTTCT
GAGTTCTCATCTCCCTCTGGCCAGAATCTGCCTGTGGAGACTCTGGGCCCAGAACCCAGGATGG
ACCCAGAATCTGAGGGAGCCTCCCAGGCCCTTCGGGACTCCTCCAAGGCAGATGGCAAAGAATT
AGCTGGGACCTTGGATGGAGAAGAGAAGCTTTTCCAGACGGAAAGTTCCCAGAGAGAAACTGCT
GTTCTGACAGAGTCTGCGGCCAAGGGCACTCTGGGAGCCGATGGTCATGGGACGGAGGCCCCTG
GAGACACAGTGGTCCAGGAAGATTCGCAGGAGACTCCTGTGGCGACGAGCCTCGGACCAGACAC
ACAGGACCTGGAGAGTGAGATCCATCCACAGAACTTACCCTCCAGTCCCAGAGCAGTTTGGAAA
GAGCATCGCTGCTCCAGCAGTGACGACGACACTGATGTAGATGTGGAGGGTCTGCGGAGACGGA
GGGGCCGGGAGCCCAGCTCATCCCAGCCCGTGGTACCCGTAGATGTGGAGGACCAGGCCAAGGG
CGAGGGTATAGGTGGAGAGCTGGGCATCTCCCTCAACATGTGTTTCCTGGGGGCCCTGGTTCTT
CTGGGCCTGGGGATCCTCCTGTTCTCTGGTACACTGCTGGAGCCCGAGACTGGGCCCATGGAGG
AAGCCGAGTTGCAGGTCTTTCCAGAAACCGGGCCGGAGACTGAACTGGTAGAGACTCTGGGGAA
CAGGCAGGATGAGATAGAGCACCTGCAGGCTTCAAGTGTCCCACCAGACAGTGTCCCCAGCCTG
CAGAGCATGGGGTTTCTGCTGGACAAGCTGGCCAAGGAGAACCAGGATATCCGGCTGCTGCAGG
CTCAGCTACAGGCTCAGAAAGAAGAACTTCAGAGCCTGTTGCACCAGCCCAAAGGGCTGGAGGA
GGAGAATGCCCGGCTCCGGGAAGCCCTGCAGCAGGGCAAGACCTCCCACCAGGCCCTAGAATCA
GAACTGCAGCAGCTAAGGGCCCGACTCCAAGGGCTAGAGGCTAACTGTGTCCGGGGTGTAGATG
GGGTGTGTCTCAACTGGGGTGGAGATCCACAGGATGGCAAGGCCACTAAAGAACAAGGCCACAA
GGGGCAGGAGCCAGACCCCAGCTTATTGGAGCAGCATAAGCAGCTTGAGGCGGAGGCCAAGGCC
CTAAGGCAGGAGCTGCAGAGACAGTGGCAGCTGCTGGGGTCTGTGCACTGGGACCTGCAGAGGG
GCTTGCGGGATGCTGGCCGGGGAGCCCCAGCTCACCCTGGCCTGGCTGAACTCGGTCACATGTT
GGCCCAGACACTGCAGGACCTCGAGAATCAGGGTATCAACACTGGCAGGTCCCCCAATGACTCG
GAGGCCTGGCACCAGAAGAAGCCTCACACCCAGAGTCCCAGGGAGTGGGGTGGGAAGGAGAAGT
GGCGCGGTGGGCAGAGGGATCAGAAGGCTGAGCACTGGAAGCCGAGGAAGGAGGAGTCTGGCCA
GGAGAGGCAAAGGAGCTGGAGGGATGAGGGCCGGGAGCACACTGGGCGCTGGAGGGAGGACAGA
CTGCGGGCGGACGAATCTGGGAGCAGAAAGGACAGCAAGCGACAGGACCCCAAGGTACACCCTA
GGAAAGATGGGAACTCCCATTCTGTAGAAAGGCAGAAGCATTCTTGGGGGAAAGACAACAGCCC
TGACGCCCTGTCCTCCTGGGAGGAGCTGCTGAGGCGCAAGTACCGACCCCCTCAGGGCTGTTCA
GGTGTGGCCGACTGTGCCCGGCAGGAGGGCCTGGCCCTCTTTGGTGTGGAGCTGGCCCCTGTGC
GGCAGCAGGAGCTGGCCTCTGTGCTGAGAGAATACTTGTCTCGGCTGCCCTGGGCCGGGCAGCT
GACCAAACAGCTGCCCCTCTCACCTGCTTACTTTGGAGAAGATGGCATCTTCAGGCATGACCGG
CTTCGCTTCAGAGATTTTGTGGATGCCTTGGAGGACAGCCTGGAGGAGGTGGCACTGAAACAGA
CAGGCGACGATGATGAAGTGGATGACTTTGAGGACTTTGTCTTCGGCCACTTCTTTGGGGACAA
GGCCCTGAAGAAGAGGTCACGAAAGAAGGAGAAGCACTCCTGGAACCCCAGAGTTGTGGGGCCC
AGGGAAGAGCACAGCCGCCATCCGCACCACTACCACCAAGGCTGAGCCCTGTCCTGCTGCAACA
GCCGGCCTTGGCATGCACCCAGCTCAAGATGCCTGGAGTTATGTGACCCTAGCAGCTATGCTCC
CACTGTCCAGCGGGCCCCTCCTGGCTCGTTGGTGCCCTTGAATGACCTTCACAGAAGAGAGCAA
CGCACTTGGCCCTGCACTGGTACCACTTTTGCTAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAA
AAAAAAAAGGCCATAGTTGGCGCTGCTGAACTGTCTAAGCAGACATATGCAAAGATAAAGGCCC
TGGGTACTAAGTGACATGTAGGGGCCTGCTGGGAGCCTGCTGGGGAGGACTCTTATTCTGAAGT
CAGAGAGCTGTCATTTTTTTGTGGCTATCCTGGGTCCACAGCAGAGCCTATCACCCTGTGCTAG
AGCTGCTGGTTAGAGACTTAGCTCCAGACTTGCCTTGGGGTTTAGCTAGCTGTGGAGACAGCTA
TCCCTAAGCCTGAGGAGTCCTCACCATGCCTCTTGCGGCTTTCACCTCCCCACCTGAGCTGTCC
CACCATGGCGGGGCTCTGTCACTTGAGGTGGTCCCTAAATGCAAGGAACACCTTGCAGTCACCA
CGCTGGTGTTTAGGCACAATCTAGGCACTGCACTCGGCCTTCCCATCCATTCCCCATGTGCGCC
CACCTTCCCCAAGGAGCCTAGCCTTGAGTCCAGCCACCAATTGTCTCACAGTCCAGGTGGGGTG
GCCTCAAGCCAGGTCATTCTCCGCAGTGTGGTGTGGTGTTCTTATCCTCAGAAAGAGAGCTGAA
GGGAATGGAGTCAGTGAAGCAAGGAAGCAGACATTCTGTTTCTGCCACACAAGAATCGATCCCT
TTTTTGGAGCGTGCTGTGGAGGACAGGGAACACGCTAACCTGGGTCTGCAGAGGTGAGGGAGCC
ACTAGGTGGCGCTCTGGCTTCACATTTCTCTAGACTTCTCCCTCCTGCCCCTGGTCACCACCCC
ACACCCCAGACACCCTACCCATTGACTAGCTCTCAAGAATTCCCAGAATCCCCCTGGTTATTCT
TCAGGAACGCCCCGCCCCCTCAGTTCAAACCTCTACGCCATTGGTAGCACACTGGGCTTCTAGC
TCTGGAACTCTCCCAGGGACTCTAGGGGGCAGTGACCACACAGGTCAGGTCAATTAAGGAGGGG
ATTAAGGACTGTAAGCTTACTGGGCAATGGTGATGCACGCCTTTAATCCCAGCCCTTGGGAGGC
AGAGGCAGGCTGATTTCTGAGTTTGAGGCCAGCCTGATCTACAAAGTGAGTTCCAGGATAGCCA
GGGAAACAAAACAGGACTGTAGGCTCTAGAAAGTGCTGGAATCGATTTTGAATTATTTAGCAAT
GCTTTTATGTCACTGTTAAAAGGCTTTTAAGTGCAGTGGCTTGTTTAATTTCCGTGCTAGACAA
GACAGGTAGAAAGGGTGGCTCATTCCACAAATGTTTAAACAGTCTGCTGTGTGGTGCTGGAGGG
ATGGCTCAGCCGCTGAGGGCACAGGCTGCTCTTCCAGAAGCCCCAGGTTTGATTCCCAGCACCC
ACATGGTAGCTCACAAATGTCTGCAACTTCAGTCTCCAGGGATCTGATGTTCTCTTCTGGCCCT
GTAGGCACCAGGCACACACACACACGGTACACAAACATACACGCAAAAACAAAAAAAGATCACC
CATCACCACATTTCTTGAAAATAAAAGTCTATTGTGTATGAGAACCAGGTAGTGAGGCCCTAGG
CCTGTAGACCCTTTAATATGCATGGAATCTGCAGCAGCAGGAGCTCTGGTTAGACTTAAGGCAC
ATTACCTTACACAGGTCAGTGTTGTAGGCTGGGGGCTCCAGGAAGGAGCCGTCTGGTTTAGAAA
GACAATTATATTCCCTGTCTCTCTGGACCAGTGTCCCTCAGAAGGAAGGCAGGTTTAACCCTGC
TTTTGCTGCTCACTCAAGGGTCCTCAGAGATCGATCTGTTTATACAGATGTGGTGACCTTGGTG
GCTGGGTGAAAGCTCAAGGCCGGAGGCAGGTAGGCTGGCATGTTGGGGTGCTGGGTCTGGAGAT
GGGGATTCACAGGCCTGCCTTGGTTTCCTAGATGGTGTTGGTACAGGGCTCTCTGGCCTCTGGT
TTCCATGTCAAGAGCTCATGTTGGATAATAAATTTTGGAGTCTCAGAGTT

hide sequence

RefSeq Acc Id:

XM_006501353 ⟹ XP_006501416

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	89,344,018 - 89,358,254 (+)	NCBI
GRCm38	3	89,436,746 - 89,450,944 (+)	NCBI

Sequence:

show sequence

CCCTCTTGTCTTCCTGGGCTGGGAGGTTGCAACAAGTTAAGCTGAAGACTGAAGCGAGGAGCTG
GGTCAGGTAAAGGAGTCCTTGCCGGGAAGGGGCGTTACAGACTCCCACTTTATCCCCAGATAAC
AAAAGAGGGCAAAGCTGTATAAAAGGAGTGGGCAGCCCCGGCGTCCACATACTGCCCAACACAG
GACCGAAGGGCGGGGAAGGAGGGAGACAGATGATTCCGAAGCAGGAACTCAGGTGGCCACTCTA
GCTGCACTGGACCTCCACAACTATGGCCTCCTGCCCAGACTCAGATAATAGCTGGGTGCTCGCT
GGTTCTGAGAATCTGCCTGTGGAGACTCTGGGCCCAGAACCCAGGATGGACCCAGAATCTGAGG
GAGCCTCCCAGGCCCTTCGGGACTCCTCCAAGGCAGATGGCAAAGAATTAGCTGGGACCTTGGA
TGGAGAAGAGAAGCTTTTCCAGACGGAAAGTTCCCAGAGAGAAACTGCTGTTCTGACAGAGTCT
GCGGCCAAGGGCACTCTGGGAGCCGATGGTCATGGGACGGAGGCCCCTGGAGACACAGTGGTCC
AGGAAGATTCGCAGGAGACTCCTGTGGCGACGAGCCTCGGACCAGACACACAGGACCTGGAGAG
TGAGATCCATCCACAGAACTTACCCTCCAGTCCCAGAGCAGTTTGGAAAGAGCATCGCTGCTCC
AGCAGTGACGACGACACTGATGTAGATGTGGAGGGTCTGCGGAGACGGAGGGGCCGGGAGCCCA
GCTCATCCCAGCCCGTGGTACCCGTAGATGTGGAGGACCAGGCCAAGGGCGAGGGTATAGGTGG
AGAGCTGGGCATCTCCCTCAACATGTGTTTCCTGGGGGCCCTGGTTCTTCTGGGCCTGGGGATC
CTCCTGTTCTCTGGTACACTGCTGGAGCCCGAGACTGGGCCCATGGAGGAAGCCGAGTTGCAGG
TCTTTCCAGAAACCGGGCCGGAGACTGAACTGGTAGAGACTCTGGGGAACAGGCAGGATGAGAT
AGAGCACCTGCAGGCTTCAAGTGTCCCACCAGACAGTGTCCCCAGCCTGCAGAGCATGGGGTTT
CTGCTGGACAAGCTGGCCAAGGAGAACCAGGATATCCGGCTGCTGCAGGCTCAGCTACAGGCTC
AGAAAGAAGAACTTCAGAGCCTGTTGCACCAGCCCAAAGGGCTGGAGGAGGAGAATGCCCGGCT
CCGGGAAGCCCTGCAGCAGGGCAAGACCTCCCACCAGGCCCTAGAATCAGAACTGCAGCAGCTA
AGGGCCCGACTCCAAGGGCTAGAGGCTAACTGTGTCCGGGGTGTAGATGGGGTGTGTCTCAACT
GGGGTGGAGATCCACAGGATGGCAAGGCCACTAAAGAACAAGGCCACAAGGGGCAGGAGCCAGA
CCCCAGCTTATTGGAGCAGCATAAGCAGCTTGAGGCGGAGGCCAAGGCCCTAAGGCAGGAGCTG
CAGAGACAGTGGCAGCTGCTGGGGTCTGTGCACTGGGACCTGCAGAGGGGCTTGCGGGATGCTG
GCCGGGGAGCCCCAGCTCACCCTGGCCTGGCTGAACTCGGTCACATGTTGGCCCAGACACTGCA
GGACCTCGAGAATCAGGGTATCAACACTGGCAGGTCCCCCAATGACTCGGAGGCCTGGCACCAG
AAGAAGCCTCACACCCAGAGTCCCAGGGAGTGGGGTGGGAAGGAGAAGTGGCGCGGTGGGCAGA
GGGATCAGAAGGCTGAGCACTGGAAGCCGAGGAAGGAGGAGTCTGGCCAGGAGAGGCAAAGGAG
CTGGAGGGATGAGGGCCGGGAGCACACTGGGCGCTGGAGGGAGGACAGACTGCGGGCGGACGAA
TCTGGGAGCAGAAAGGACAGCAAGCGACAGGACCCCAAGGTACACCCTAGGAAAGATGGGAACT
CCCATTCTGTAGAAAGGCAGAAGCATTCTTGGGGGAAAGACAACAGCCCTGACGCCCTGTCCTC
CTGGGAGGAGCTGCTGAGGCGCAAGTACCGACCCCCTCAGGGCTGTTCAGGTGTGGCCGACTGT
GCCCGGCAGGAGGGCCTGGCCCTCTTTGGTGTGGAGCTGGCCCCTGTGCGGCAGCAGGAGCTGG
CCTCTGTGCTGAGAGAATACTTGTCTCGGCTGCCCTGGGCCGGGCAGCTGACCAAACAGCTGCC
CCTCTCACCTGCTTACTTTGGAGAAGATGGCATCTTCAGGCATGACCGGCTTCGCTTCAGAGAT
TTTGTGGATGCCTTGGAGGACAGCCTGGAGGAGGTGGCACTGAAACAGACAGGCGACGATGATG
AAGTGGATGACTTTGAGGACTTTGTCTTCGGCCACTTCTTTGGGGACAAGGCCCTGAAGAAGAG
GTCACGAAAGAAGGAGAAGCACTCCTGGAACCCCAGAGTTGTGGGGCCCAGGGAAGAGCACAGC
CGCCATCCGCACCACTACCACCAAGGCTGAGCCCTGTCCTGCTGCAACAGCCGGCCTTGGCATG
CACCCAGCTCAAGATGCCTGGAGTTATGTGACCCTAGCAGCTATGCTCCCACTGTCCAGCGGGC
CCCTCCTGGCTCGTTGGTGCCCTTGAATGACCTTCACAGAAGAGAGCAACGCACTTGGCCCTGC
ACTGGTACCACTTTTGCTAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAAAAAAAAAAGGCCATA
GTTGGCGCTGCTGAACTGTCTAAGCAGACATATGCAAAGATAAAGGCCCTGGGTACTAAGTGAC
ATGTAGGGGCCTGCTGGGAGCCTGCTGGGGAGGACTCTTATTCTGAAGTCAGAGAGCTGTCATT
TTTTTGTGGCTATCCTGGGTCCACAGCAGAGCCTATCACCCTGTGCTAGAGCTGCTGGTTAGAG
ACTTAGCTCCAGACTTGCCTTGGGGTTTAGCTAGCTGTGGAGACAGCTATCCCTAAGCCTGAGG
AGTCCTCACCATGCCTCTTGCGGCTTTCACCTCCCCACCTGAGCTGTCCCACCATGGCGGGGCT
CTGTCACTTGAGGTGGTCCCTAAATGCAAGGAACACCTTGCAGTCACCACGCTGGTGTTTAGGC
ACAATCTAGGCACTGCACTCGGCCTTCCCATCCATTCCCCATGTGCGCCCACCTTCCCCAAGGA
GCCTAGCCTTGAGTCCAGCCACCAATTGTCTCACAGTCCAGGTGGGGTGGCCTCAAGCCAGGTC
ATTCTCCGCAGTGTGGTGTGGTGTTCTTATCCTCAGAAAGAGAGCTGAAGGGAATGGAGTCAGT
GAAGCAAGGAAGCAGACATTCTGTTTCTGCCACACAAGAATCGATCCCTTTTTTGGAGCGTGCT
GTGGAGGACAGGGAACACGCTAACCTGGGTCTGCAGAGGTGAGGGAGCCACTAGGTGGCGCTCT
GGCTTCACATTTCTCTAGACTTCTCCCTCCTGCCCCTGGTCACCACCCCACACCCCAGACACCC
TACCCATTGACTAGCTCTCAAGAATTCCCAGAATCCCCCTGGTTATTCTTCAGGAACGCCCCGC
CCCCTCAGTTCAAACCTCTACGCCATTGGTAGCACACTGGGCTTCTAGCTCTGGAACTCTCCCA
GGGACTCTAGGGGGCAGTGACCACACAGGTCAGGTCAATTAAGGAGGGGATTAAGGACTGTAAG
CTTACTGGGCAATGGTGATGCACGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGGCTGATT
TCTGAGTTTGAGGCCAGCCTGATCTACAAAGTGAGTTCCAGGATAGCCAGGGAAACAAAACAGG
ACTGTAGGCTCTAGAAAGTGCTGGAATCGATTTTGAATTATTTAGCAATGCTTTTATGTCACTG
TTAAAAGGCTTTTAAGTGCAGTGGCTTGTTTAATTTCCGTGCTAGACAAGACAGGTAGAAAGGG
TGGCTCATTCCACAAATGTTTAAACAGTCTGCTGTGTGGTGCTGGAGGGATGGCTCAGCCGCTG
AGGGCACAGGCTGCTCTTCCAGAAGCCCCAGGTTTGATTCCCAGCACCCACATGGTAGCTCACA
AATGTCTGCAACTTCAGTCTCCAGGGATCTGATGTTCTCTTCTGGCCCTGTAGGCACCAGGCAC
ACACACACACGGTACACAAACATACACGCAAAAACAAAAAAAGATCACCCATCACCACATTTCT
TGAAAATAAAAGTCTATTGTGTATGAGAACCAGGTAGTGAGGCCCTAGGCCTGTAGACCCTTTA
ATATGCATGGAATCTGCAGCAGCAGGAGCTCTGGTTAGACTTAAGGCACATTACCTTACACAGG
TCAGTGTTGTAGGCTGGGGGCTCCAGGAAGGAGCCGTCTGGTTTAGAAAGACAATTATATTCCC
TGTCTCTCTGGACCAGTGTCCCTCAGAAGGAAGGCAGGTTTAACCCTGCTTTTGCTGCTCACTC
AAGGGTCCTCAGAGATCGATCTGTTTATACAGATGTGGTGACCTTGGTGGCTGGGTGAAAGCTC
AAGGCCGGAGGCAGGTAGGCTGGCATGTTGGGGTGCTGGGTCTGGAGATGGGGATTCACAGGCC
TGCCTTGGTTTCCTAGATGGTGTTGGTACAGGGCTCTCTGGCCTCTGGTTTCCATGTCAAGAGC
TCATGTTGGATAATAAATTTTGGAGTCTCAGAGTT

hide sequence

Protein Sequences


Protein RefSeqs	NP_666243	(Get FASTA)	NCBI Sequence Viewer
	XP_006501414	(Get FASTA)	NCBI Sequence Viewer
	XP_006501415	(Get FASTA)	NCBI Sequence Viewer
	XP_006501416	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH26838	(Get FASTA)	NCBI Sequence Viewer
	AAH27771	(Get FASTA)	NCBI Sequence Viewer
	AAH34200	(Get FASTA)	NCBI Sequence Viewer
	BAC26157	(Get FASTA)	NCBI Sequence Viewer
	BAE35070	(Get FASTA)	NCBI Sequence Viewer
	BAE35092	(Get FASTA)	NCBI Sequence Viewer
	BAE35247	(Get FASTA)	NCBI Sequence Viewer
	BAE35630	(Get FASTA)	NCBI Sequence Viewer
	BAE41713	(Get FASTA)	NCBI Sequence Viewer
	EDL15193	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000040429
	ENSMUSP00000040429.4
GenBank Protein	Q3TVI8	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_666243 ⟸ NM_146131

- UniProtKB:

Q3TWL9 (UniProtKB/Swiss-Prot), Q3TD91 (UniProtKB/Swiss-Prot), Q8R319 (UniProtKB/Swiss-Prot), Q3TVI8 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MASCPDSDNSWVLAGSENLPVETLGPEPRMDPESEGASQALRDSSKADGKELAGTLDGEEKLFQ
TESSQRETAVLTESAAKGTLGADGHGTEAPGDTVVQEDSQETPVATSLGPDTQDLESEIHPQNL
PSSPRAVWKEHRCSSSDDDTDVDVEGLRRRRGREPSSSQPVVPVDVEDQAKGEGIGGELGISLN
MCFLGALVLLGLGILLFSGTLLEPETGPMEEAELQVFPETGPETELVETLGNRQDEIEHLQASS
VPPDSVPSLQSMGFLLDKLAKENQDIRLLQAQLQAQKEELQSLLHQPKGLEEENARLREALQQG
KTSHQALESELQQLRARLQGLEANCVRGVDGVCLNWGGDPQDGKATKEQGHKGQEPDPSLLEQH
KQLEAEAKALRQELQRQWQLLGSVHWDLQRGLRDAGRGAPAHPGLAELGHMLAQTLQDLENQGI
NTGRSPNDSEAWHQKKPHTQSPREWGGKEKWRGGQRDQKAEHWKPRKEESGQERQRSWRDEGRE
HTGRWREDRLRADESGSRKDSKRQDPKVHPRKDGNSHSVERQKHSWGKDNSPDALSSWEELLRR
KYRPPQGCSGVADCARQEGLALFGVELAPVRQQELASVLREYLSRLPWAGQLTKQLPLSPAYFG
EDGIFRHDRLRFRDFVDALEDSLEEVALKQTGDDDEVDDFEDFVFGHFFGDKALKKRSRKKEKH
SWNPRVVGPREEHSRHPHHYHQG

hide sequence

RefSeq Acc Id:

XP_006501414 ⟸ XM_006501351

- Peptide Label:

isoform X1

- Sequence:

show sequence

MASCPDSDNSWVLAGSEFSSPSGQNLPVETLGPEPRMDPESEGASQALRDSSKADGKELAGTLD
GEEKLFQTESSQRETAVLTESAAKGTLGADGHGTEAPGDTVVQEDSQETPVATSLGPDTQDLES
EIHPQNLPSSPRAVWKEHRCSSSDDDTDVDVEGLRRRRGREPSSSQPVVPVDVEDQAKGEGIGG
ELGISLNMCFLGALVLLGLGILLFSGTLLEPETGPMEEAELQVFPETGPETELVETLGNRQDEI
EHLQASSVPPDSVPSLQSMGFLLDKLAKENQDIRLLQAQLQAQKEELQSLLHQPKGLEEENARL
REALQQGKTSHQALESELQQLRARLQGLEANCVRGVDGVCLNWGGDPQDGKATKEQGHKGQEPD
PSLLEQHKQLEAEAKALRQELQRQWQLLGSVHWDLQRGLRDAGRGAPAHPGLAELGHMLAQTLQ
DLENQGINTGRSPNDSEAWHQKKPHTQSPREWGGKEKWRGGQRDQKAEHWKPRKEESGQERQRS
WRDEGREHTGRWREDRLRADESGSRKDSKRQDPKVHPRKDGNSHSVERQKHSWGKDNSPDALSS
WEELLRRKYRPPQGCSGVADCARQEGLALFGVELAPVRQQELASVLREYLSRLPWAGQLTKQLP
LSPAYFGEDGIFRHDRLRFRDFVDALEDSLEEVALKQTGDDDEVDDFEDFVFGHFFGDKALKKR
SRKKEKHSWNPRVVGPREEHSRHPHHYHQG

hide sequence

RefSeq Acc Id:	XP_006501416 ⟸ XM_006501353
- Peptide Label:	isoform X2
- UniProtKB:	Q3TWL9 (UniProtKB/Swiss-Prot), Q3TD91 (UniProtKB/Swiss-Prot), Q8R319 (UniProtKB/Swiss-Prot), Q3TVI8 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MASCPDSDNSWVLAGSENLPVETLGPEPRMDPESEGASQALRDSSKADGKELAGTLDGEEKLFQ TESSQRETAVLTESAAKGTLGADGHGTEAPGDTVVQEDSQETPVATSLGPDTQDLESEIHPQNL PSSPRAVWKEHRCSSSDDDTDVDVEGLRRRRGREPSSSQPVVPVDVEDQAKGEGIGGELGISLN MCFLGALVLLGLGILLFSGTLLEPETGPMEEAELQVFPETGPETELVETLGNRQDEIEHLQASS VPPDSVPSLQSMGFLLDKLAKENQDIRLLQAQLQAQKEELQSLLHQPKGLEEENARLREALQQG KTSHQALESELQQLRARLQGLEANCVRGVDGVCLNWGGDPQDGKATKEQGHKGQEPDPSLLEQH KQLEAEAKALRQELQRQWQLLGSVHWDLQRGLRDAGRGAPAHPGLAELGHMLAQTLQDLENQGI NTGRSPNDSEAWHQKKPHTQSPREWGGKEKWRGGQRDQKAEHWKPRKEESGQERQRSWRDEGRE HTGRWREDRLRADESGSRKDSKRQDPKVHPRKDGNSHSVERQKHSWGKDNSPDALSSWEELLRR KYRPPQGCSGVADCARQEGLALFGVELAPVRQQELASVLREYLSRLPWAGQLTKQLPLSPAYFG EDGIFRHDRLRFRDFVDALEDSLEEVALKQTGDDDEVDDFEDFVFGHFFGDKALKKRSRKKEKH SWNPRVVGPREEHSRHPHHYHQG hide sequence

RefSeq Acc Id:

XP_006501415 ⟸ XM_006501352

- Peptide Label:

isoform X1

- Sequence:

show sequence

MASCPDSDNSWVLAGSEFSSPSGQNLPVETLGPEPRMDPESEGASQALRDSSKADGKELAGTLD
GEEKLFQTESSQRETAVLTESAAKGTLGADGHGTEAPGDTVVQEDSQETPVATSLGPDTQDLES
EIHPQNLPSSPRAVWKEHRCSSSDDDTDVDVEGLRRRRGREPSSSQPVVPVDVEDQAKGEGIGG
ELGISLNMCFLGALVLLGLGILLFSGTLLEPETGPMEEAELQVFPETGPETELVETLGNRQDEI
EHLQASSVPPDSVPSLQSMGFLLDKLAKENQDIRLLQAQLQAQKEELQSLLHQPKGLEEENARL
REALQQGKTSHQALESELQQLRARLQGLEANCVRGVDGVCLNWGGDPQDGKATKEQGHKGQEPD
PSLLEQHKQLEAEAKALRQELQRQWQLLGSVHWDLQRGLRDAGRGAPAHPGLAELGHMLAQTLQ
DLENQGINTGRSPNDSEAWHQKKPHTQSPREWGGKEKWRGGQRDQKAEHWKPRKEESGQERQRS
WRDEGREHTGRWREDRLRADESGSRKDSKRQDPKVHPRKDGNSHSVERQKHSWGKDNSPDALSS
WEELLRRKYRPPQGCSGVADCARQEGLALFGVELAPVRQQELASVLREYLSRLPWAGQLTKQLP
LSPAYFGEDGIFRHDRLRFRDFVDALEDSLEEVALKQTGDDDEVDDFEDFVFGHFFGDKALKKR
SRKKEKHSWNPRVVGPREEHSRHPHHYHQG

hide sequence

Ensembl Acc Id:

ENSMUSP00000118496 ⟸ ENSMUST00000130858

Ensembl Acc Id:

ENSMUSP00000115904 ⟸ ENSMUST00000146630

Ensembl Acc Id:

ENSMUSP00000121658 ⟸ ENSMUST00000145753

Ensembl Acc Id:

ENSMUSP00000040429 ⟸ ENSMUST00000038942

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q3TVI8-F1-model_v2	AlphaFold	Q3TVI8	1-727	view protein structure

Promoters

RGD ID:

6834197

Promoter ID:

MM_KWN:34972

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

NM_146131, OTTMUST00000052416, OTTMUST00000052417, OTTMUST00000052418, OTTMUST00000052419

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	3	89,239,676 - 89,240,757 (+)	MPROMDB

RGD ID:

6848772

Promoter ID:

MM_TRO:6300

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Lung, Spleen

Transcripts:

MTR000994.3.1244.2, MTR000994.3.1244.3

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	3	89,251,419 - 89,251,919 (+)	MPROMDB

RGD ID:

6881268

Promoter ID:

EPDNEW_M4085

Type:

initiation region

Name:

Pbxip1_1

Description:

Mus musculus pre B cell leukemia transcription factor interactingprotein 1 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	3	89,436,749 - 89,436,809	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2441670	AgrOrtholog
Ensembl Genes	ENSMUSG00000042613	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000038942	ENTREZGENE
	ENSMUST00000038942.10	UniProtKB/Swiss-Prot
InterPro	CCPG1/PBIP1	UniProtKB/Swiss-Prot
KEGG Report	mmu:229534	UniProtKB/Swiss-Prot
MGD	MGI:2441670	ENTREZGENE
NCBI Gene	229534	ENTREZGENE
PANTHER	CELL CYCLE PROGRESSION PROTEIN 1	UniProtKB/Swiss-Prot
	PTHR28638:SF1	UniProtKB/Swiss-Prot
PhenoGen	Pbxip1	PhenoGen
UniProt	D3YUE1_MOUSE	UniProtKB/TrEMBL
	D3YY15_MOUSE	UniProtKB/TrEMBL
	D3Z2F0_MOUSE	UniProtKB/TrEMBL
	PBIP1_MOUSE	UniProtKB/Swiss-Prot
	Q3TD91	ENTREZGENE
	Q3TVI8	ENTREZGENE
	Q3TWL9	ENTREZGENE
	Q8R319	ENTREZGENE
UniProt Secondary	Q3TD91	UniProtKB/Swiss-Prot
	Q3TWL9	UniProtKB/Swiss-Prot
	Q8R319	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-02-07	Pbxip1	pre B cell leukemia transcription factor interacting protein 1	Pbxip1	pre-B-cell leukemia transcription factor interacting protein 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype