Advanced Search (OLGA)

Gene: Cct6a (chaperonin containing TCP1 subunit 6A) Mus musculus

Analyze

Symbol:

Cct6a

Name:

chaperonin containing TCP1 subunit 6A

RGD ID:

1312395

MGI Page

MGI

Description:

Predicted to enable WD40-repeat domain binding activity; protein folding chaperone; and unfolded protein binding activity. Acts upstream of or within binding activity of sperm to zona pellucida. Located in acrosomal vesicle and cell body. Part of chaperonin-containing T-complex and zona pellucida receptor complex. Is expressed in 8-cell stage embryo. Orthologous to human CCT6A (chaperonin containing TCP1 subunit 6A).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

CCT-zeta; CCT-zeta-1; Cct6; Cctz-1; chaperonin containing TCP-1; chaperonin containing Tcp1, subunit 6a (zeta); chaperonin subunit 6a (zeta); T-complex protein 1 subunit zeta; TCP-1-zeta

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CCT6A (chaperonin containing TCP1 subunit 6A)	HGNC	HGNC, Panther
Rattus norvegicus (Norway rat):	Cct6a (chaperonin containing TCP1 subunit 6A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cct6a (chaperonin containing TCP1 subunit 6A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CCT6A (chaperonin containing TCP1 subunit 6A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CCT6A (chaperonin containing TCP1 subunit 6A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cct6a (chaperonin containing TCP1 subunit 6A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CCT6A (chaperonin containing TCP1 subunit 6A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CCT6A (chaperonin containing TCP1 subunit 6A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cct6a (chaperonin containing TCP1 subunit 6A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CCT6B (chaperonin containing TCP1 subunit 6B)	HGNC	OrthoDB
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Cct6a (chaperonin containing TCP1 subunit 6A)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CCT6A (chaperonin containing TCP1 subunit 6A)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cct6a (chaperonin containing TCP1, subunit 6A (zeta 1))	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	CCT6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CCT6	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	cct-6	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cct6a	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)

Related Pseudogenes:

Gm19259 Gm20592 Gm20593 Gm8679

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

NCBI Annotation Information:

Note: This gene aligns across a gap in the GRCm38 reference genome assembly, and therefore, the 5' end of this gene was annotated on NT_039313.8 and the 3' end was annotated on NT_039314.8 in NCBI's Mus Musculus Annotation Release 105. [15 Jun 2015]

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	129,864,420 - 129,875,284 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	129,864,062 - 129,875,212 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	129,787,356 - 129,846,443 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	129,786,998 - 129,846,371 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	130,293,261 - 130,300,376 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv37	5	130,320,838 - 130,322,231 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	130,102,094 - 130,109,209 (+)	NCBI		MGSCv36	mm8
Celera	5	126,831,958 - 126,842,310 (+)	NCBI		Celera
Cytogenetic Map	5	G1.3	NCBI
cM Map	5	68.26	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

pleomorphic xanthoastrocytoma (ISO)

PSPH deficiency (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (ISO)

(-)-epigallocatechin 3-gallate (ISO)

(1->4)-beta-D-glucan (EXP)

1,2-dimethylhydrazine (EXP)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (EXP,ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,6-trinitrotoluene (ISO)

2,4-dinitrotoluene (ISO)

2,6-dimethoxyphenol (ISO)

2,6-dinitrotoluene (ISO)

2-amino-14,16-dimethyloctadecan-3-ol (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

4-amino-2,6-dinitrotoluene (ISO)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

aminoglutethimide (ISO)

amitrole (ISO)

arsenous acid (ISO)

benzatropine (ISO)

benzo[a]pyrene (EXP,ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (EXP,ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

C60 fullerene (ISO)

caffeine (ISO)

calcium dichloride (ISO)

cannabidiol (ISO)

captan (EXP)

carbon nanotube (EXP)

chromium(6+) (EXP)

cisplatin (ISO)

CU-O LINKAGE (ISO)

Cuprizon (ISO)

cyclosporin A (ISO)

DDE (ISO)

deguelin (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

disodium selenite (ISO)

ethanol (EXP)

ethyl methanesulfonate (ISO)

finasteride (ISO)

fipronil (ISO)

flutamide (ISO)

folic acid (EXP)

folpet (EXP)

FR900359 (ISO)

furfural (ISO)

gentamycin (ISO)

hydrogen peroxide (ISO)

irinotecan (ISO)

ivermectin (ISO)

lead(0) (ISO)

lithocholic acid (ISO)

lovastatin (EXP)

megestrol acetate (ISO)

methyl methanesulfonate (ISO)

N-nitrosomorpholine (ISO)

nefazodone (ISO)

nimesulide (ISO)

nitrates (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

paraquat (ISO)

perfluorooctane-1-sulfonic acid (EXP)

pirinixic acid (EXP,ISO)

propiconazole (EXP)

rotenone (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sodium chloride (ISO)

sodium dichromate (EXP,ISO)

tetrachloromethane (EXP,ISO)

thioacetamide (ISO)

trichloroethene (EXP,ISO)

trimellitic anhydride (EXP)

triphenyl phosphate (ISO)

tunicamycin (ISO)

valdecoxib (ISO)

valproic acid (EXP,ISO)

vinclozolin (ISO)

warfarin (EXP)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

binding of sperm to zona pellucida (IDA)

chaperone-mediated protein folding (ISO)

positive regulation of establishment of protein localization to telomere (ISO)

positive regulation of protein localization to Cajal body (ISO)

positive regulation of telomerase RNA localization to Cajal body (ISO)

positive regulation of telomere maintenance via telomerase (ISO)

protein folding (IBA,IEA,ISO)

protein stabilization (ISO)

Cellular Component

acrosomal vesicle (IDA)

cell body (IDA)

chaperonin-containing T-complex (IBA,IDA,ISO)

cytosol (ISO)

microtubule (ISO)

zona pellucida receptor complex (IDA)

Molecular Function

ATP binding (IEA)

ATP hydrolysis activity (IEA)

ATP-dependent protein folding chaperone (IEA)

protein binding (IPI)

protein folding chaperone (ISO)

unfolded protein binding (IBA,IEA)

WD40-repeat domain binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Identification of six Tcp-1-related genes encoding divergent subunits of the TCP-1-containing chaperonin.	Kubota H, etal., Curr Biol 1994 Feb 1;4(2):89-99.
2.	The chaperonin containing t-complex polypeptide 1 (TCP-1). Multisubunit machinery assisting in protein folding and assembly in the eukaryotic cytosol.	Kubota H, etal., Eur J Biochem 1995 May 15;230(1):3-16.
3.	Structures and co-regulated expression of the genes encoding mouse cytosolic chaperonin CCT subunits.	Kubota H, etal., Eur J Biochem 1999 Jun;262(2):492-500.
4.	MGDs mouse GO annotations	MGD data from the GO Consortium
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:7828721	PMID:9013858	PMID:9250675	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11172053	PMID:11217851	PMID:11387227	PMID:12466851	PMID:12477932
PMID:12520002	PMID:12904583	PMID:14610273	PMID:15782199	PMID:16107646	PMID:16141072	PMID:16141073	PMID:18307411	PMID:18799693	PMID:21267068	PMID:21565611	PMID:21731673
PMID:21873635	PMID:21880732	PMID:22421546	PMID:22794259	PMID:23055941	PMID:23716698	PMID:24457600	PMID:27561680	PMID:28375158	PMID:28378742	PMID:30409884	PMID:30595499
PMID:32325033	PMID:32554809	PMID:35449600	PMID:36293380	PMID:36417873	PMID:37142655

Genomics

Comparative Map Data

Cct6a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	129,864,420 - 129,875,284 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	129,864,062 - 129,875,212 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	129,787,356 - 129,846,443 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	129,786,998 - 129,846,371 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	130,293,261 - 130,300,376 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv37	5	130,320,838 - 130,322,231 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	130,102,094 - 130,109,209 (+)	NCBI		MGSCv36	mm8
Celera	5	126,831,958 - 126,842,310 (+)	NCBI		Celera
Cytogenetic Map	5	G1.3	NCBI
cM Map	5	68.26	NCBI

CCT6A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	56,051,765 - 56,063,989 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	56,051,685 - 56,063,989 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	56,119,458 - 56,131,682 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	56,086,872 - 56,099,176 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	55,893,586 - 55,905,891	NCBI
Celera	7	67,172,779 - 67,185,081 (+)	NCBI		Celera
Cytogenetic Map	7	p11.2	NCBI
HuRef	7	55,933,178 - 55,945,465 (+)	NCBI		HuRef
CHM1_1	7	56,122,415 - 56,134,705 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	56,211,599 - 56,223,813 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	56,123,625 - 56,135,929 (+)	NCBI

Cct6a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	32,508,842 - 32,519,072 (-)	NCBI		GRCr8
mRatBN7.2	12	26,872,736 - 26,883,125 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	26,872,574 - 26,883,337 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	28,009,963 - 28,019,744 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	28,620,502 - 28,630,283 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	27,681,988 - 27,691,769 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	30,491,584 - 30,501,813 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	30,491,416 - 30,501,860 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	32,433,505 - 32,443,734 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	27,992,348 - 28,002,578 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	27,855,700 - 27,866,156 (+)	NCBI
Celera	12	28,578,429 - 28,588,659 (-)	NCBI		Celera
Cytogenetic Map	12	q13	NCBI

Cct6a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955456	8,223,774 - 8,237,966 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955456	8,223,785 - 8,236,760 (+)	NCBI	ChiLan1.0	ChiLan1.0

CCT6A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	60,903,879 - 60,915,550 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	109,228,731 - 109,240,863 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	56,664,757 - 56,677,000 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	57,087,935 - 57,099,519 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	57,087,072 - 57,098,613 (+)	Ensembl	panpan1.1		panPan2

CCT6A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	546,278 - 556,996 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	546,307 - 557,001 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	2,245,558 - 2,256,308 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	349,896 - 360,647 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	349,907 - 361,209 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	293,657 - 304,407 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	287,738 - 298,489 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	458,965 - 469,718 (+)	NCBI		UU_Cfam_GSD_1.0

Cct6a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	126,136,398 - 126,149,056 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936543	7,887,414 - 7,900,200 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936543	7,887,511 - 7,900,174 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCT6A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	16,843,804 - 16,858,819 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	16,843,801 - 16,858,819 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	17,180,645 - 17,194,658 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CCT6A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	2,715,990 - 2,728,397 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	2,718,975 - 2,728,239 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	179,918,592 - 179,930,935 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cct6a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	8,247,469 - 8,258,978 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	8,247,477 - 8,258,335 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Cct6a
616 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	62
Count of miRNA genes:	58
Interacting mature miRNAs:	61
Transcripts:	ENSMUST00000031402
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
27226719	Tibw6_m	tibia width 6, proximal, 16 week (mouse)					5	72857343	139985755	Mouse
1301715	Elmaz2_m	elevated maze behavior 2 (mouse)			Not determined		5	125178229	141700466	Mouse
10412191	Bbaa24_m	B.burgdorferi-associated arthritis 24 (mouse)			Not determined		5	119945037	141700466	Mouse
13464142	Bbaa2a_m	B.burgdorferi-associated arthritis 2a (mouse)					5	128571199	130052971	Mouse
11528552	Scram1_m	spinal cord resistance to astrocytoma modifier 1 (mouse)					5	121455402	151758149	Mouse
1300827	Cora1_m	correlation in cytokine production 1 (mouse)			Not determined		5	115156883	149157015	Mouse
25314315	Mlh1fc4_m	MLH1 foci count 4 (mouse)					5	74460661	132528839	Mouse
14746986	Manh58_m	mandible shape 58 (mouse)					5	102446283	136446283	Mouse
10412239	Alpq7_m	alcohol preference QTL 7 (mouse)			Not determined		5	104705939	138705939	Mouse
12880406	Jcdq2_m	joint cartilage degeneration QTL 2 (mouse)					5	129787831	151758149	Mouse
4141218	Ath24_m	atherosclerosis 24 (mouse)			Not determined			129520084	151758149	Mouse
12859290	Criq2_m	Citrobacter rodentium infection QTL 2 (mouse)					5	101332579	135332579	Mouse
1300940	Actd3_m	activity-distance traveled 3 (mouse)			Not determined		5	96320385	130320533	Mouse
1300659	Pcd8ts1_m	p-glycoprotein positive CD8 T cell subset 1 (mouse)			Not determined		5	97021753	131021986	Mouse
1301363	Pbwg13_m	postnatal body weight growth 13 (mouse)			Not determined		5	125133457	151758149	Mouse
1301362	Prnr1_m	prion resistance 1 (mouse)			Not determined		5	89418876	146787935	Mouse
1300913	Bwefm_m	body weight females and males day 10 (mouse)			Not determined		5	109439348	143439459	Mouse
4141081	Nidd7k_m	Nidd7 on KK-A (mouse)			Not determined			119945037	149347326	Mouse
1301624	Aevm2_m	autoimmune extremity vasculitis in MRL mice 2 (mouse)			Not determined		5	101863832	135864028	Mouse
10043890	Trigq4_m	triglyceride QTL 4 (mouse)			Not determined		5	107906299	141906412	Mouse
1302079	Lbw3_m	lupus NZB x NZW 3 (mouse)			Not determined		5	124700335	151758149	Mouse
11532736	Sluc33b_m	susceptibility to lung cancer 33b (mouse)					5	102945037	136945196	Mouse
26884395	Humsd2_m	humerus midshaft diameter 2, 10 week (mouse)					5	70057343	132528839	Mouse
1301858	Smdq1_m	segregation of mitochondrial DNA QTL 1 (mouse)			Not determined		5	97021753	131021986	Mouse
1301986	Bpq4_m	blood pressure QTL 4 (mouse)			Not determined		5	121555236	151758149	Mouse
1301857	Bglq14_m	body growth late QTL 14 (mouse)			Not determined		5	118948964	151758149	Mouse
10412202	Bbaa26_m	B.burgdorferi-associated arthritis 26 (mouse)			Not determined		5	104583688	138555455	Mouse
1301543	Hypch_m	hypercholesterolemia (mouse)			Not determined		5	109238624	139118905	Mouse
12904945	Tammq2_m	tibialis anterior muscle mass QTL 2 (mouse)					5	100665965	134665965	Mouse
4142473	Chlq11_m	circulating hormone level QTL 11 (mouse)			Not determined		5	107906299	141906412	Mouse
13464251	Ahl21_m	age related hearing loss, early onset 21 (mouse)					5	109167240	143167381	Mouse
11341716	Rvfs3_m	Rift Valley fever susceptibility 3 (mouse)					5	26441234	138455402	Mouse
1301226	Bbaa2_m	B.burgdorferi-associated arthritis 2 (mouse)			Not determined		5	115156883	149157015	Mouse
12904959	Smmq1_m	soleus muscle mass QTL 1 (mouse)					5	100665965	134665965	Mouse
10412197	Bbaa25_m	B.burgdorferi-associated arthritis 25 (mouse)			Not determined		5	109167240	143167381	Mouse
1301102	Cia14_m	collagen induced arthritis 14 (mouse)			Not determined		5	113320385	138555455	Mouse
13506928	Recrq8_m	recombination rate in male meiosis QTL 8 (mouse)					5	74460661	132528839	Mouse
13464243	Ahl20_m	age related hearing loss, early onset 20 (mouse)					5	107906299	141906412	Mouse

Markers in Region

Z31557

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	129,846,150 - 129,846,271	UniSTS	GRCm38
MGSCv37	5	130,322,026 - 130,322,147	UniSTS	GRCm37
Celera	5	126,842,104 - 126,842,225	UniSTS
Cytogenetic Map	5	F	UniSTS
Cytogenetic Map	5	G1.3	UniSTS
Whitehead/MRC_RH	5	1567.54	UniSTS

Cct6a

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	5	G1.3	UniSTS

Cct6a

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	5	G1.3	UniSTS
cM Map	5	68.26	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_009838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB022159	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK077916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK134428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK145522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK147130	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK149757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK150977	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK160067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK164312	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK165612	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK166749	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK166795	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK166870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK166887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK166929	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167076	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167164	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167669	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK168065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK168940	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK169033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK177569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK180324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK184284	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK186047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK190808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK194557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK200488	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK200859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK201996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK202658	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK204480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK204878	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK207761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK216762	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK219945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC018459	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC055043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC069917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC094352	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY619572	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CAAA01063609	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CAAA01206539	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	MG954262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z31557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000031402 ⟹ ENSMUSP00000158738

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	5	129,787,439 - 129,845,820 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000201414

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	129,864,062 - 129,875,212 (+)	Ensembl
GRCm38.p6 Ensembl	5	129,786,998 - 129,846,371 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000201653

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	129,866,942 - 129,868,127 (+)	Ensembl
GRCm38.p6 Ensembl	5	129,789,878 - 129,791,064 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000201927

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	5	129,844,970 - 129,845,982 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000202262

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	129,870,244 - 129,871,563 (+)	Ensembl
GRCm38.p6 Ensembl	5	129,793,181 - 129,794,500 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000202466

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	5	129,794,575 - 129,845,865 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000202854

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	129,866,745 - 129,869,120 (+)	Ensembl
GRCm38.p6 Ensembl	5	129,789,681 - 129,792,057 (+)	Ensembl

RefSeq Acc Id:

NM_009838 ⟹ NP_033968

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	129,864,420 - 129,875,284 (+)	NCBI
GRCm38	5	129,787,356 - 129,846,443 (+)	NCBI
MGSCv37	5	130,293,261 - 130,300,376 (+)	RGD
Celera	5	126,831,929 - 126,842,398 (+)	NCBI
cM Map	5		ENTREZGENE

Sequence:

show sequence

GGGCGGGCCGGGTGCGTAAGACTTTTCGAGAAGACCCCGCAGAGAGCACGTTGTTCTCGGCCTC
TCCCGGAGCTAGGCCAGCCATGGCGGCGGTAAAGACCCTAAATCCGAAGGCCGAGGTGGCCCGG
GCCCAGGCAGCGCTGGCGGTGAACATCAGCGCGGCTCGGGGCCTGCAGGATGTTCTGAGGACCA
ACTTGGGGCCTAAGGGCACCATGAAGATGCTTGTATCTGGTGCTGGAGACATCAAACTTACTAA
AGATGGCAATGTGCTGCTTCATGAAATGCAAATTCAACACCCAACAGCCTCTTTGATAGCAAAA
GTGGCTACAGCCCAGGATGACATAACTGGCGATGGCACTACATCCAATGTCCTCATCATCGGGG
AGCTGCTCAAACAGGCGGACCTGTACATTTCTGAAGGTCTTCACCCAAGAATAATAACTGAAGG
TTTTGAAGCGGCAAAAGAAAAGGCACTCCAATTTCTGGAACAAGTCAAAGTAAGCAAAGAGATG
GACAGAGAAACACTCATCGATGTGGCGAGGACATCTCTGCGGACTAAAGTTCATGCTGAACTTG
CAGATGTCTTGACAGAGGCTGTAGTGGACTCCATCTTGGCCATTAGGAAAAAGGACGAGCCCAT
TGACCTCTTCATGGTTGAGATCATGGAGATGAAGCATAAATCTGAGACAGATACAAGCTTAATC
AGAGGGCTTGTTTTGGATCATGGAGCTCGGCATCCTGATATGAAGAAGAGAGTGGAAAATGCCT
ACATCCTCACTTGCAACGTGTCCTTAGAGTATGAGAAAACAGAAGTGAATTCTGGGTTTTTTTA
CAAGAGTGCAGAAGAGAGAGAAAAACTAGTAAAGGCTGAAAGAAAATTCATTGAAGATAGAGTT
AAAAAAATCATAGAGCTGAAAAAGAAAGTCTGTGGTGACTCAGATAAAGGATTTGTCGTTATTA
ATCAAAAGGGGATTGACCCCTTTTCCTTAGATGCCCTTGCGAAAGAAGGGATCGTAGCTCTGCG
CAGAGCCAAGAGGAGAAACATGGAGAGGCTGACACTTGCTTGTGGTGGGATAGCTCTGAATTCC
TTTGATGACCTGAATCCTGACTGTTTGGGACATGCAGAGCTTGTCTATGAGTATACACTGGGTG
AGGAGAAGTTCACCTTTATTGAGAAGTGTAACAATCCCCGTTCTGTCACTTTACTGGTTAAAGG
ACCAAATAAGCACACACTGACTCAAATCAAGGATGCAATAAGAGATGGCTTGAGGGCTGTCAAA
AATGCTATTGATGATGGCTGTGTTGTCCCGGGTGCGGGTGCAGTAGAAGTGGCACTGGCAGAAG
CTCTGATTAAATACAAGCCCAGTGTGAAGGGCAGGGCGCAGCTTGGAGTCCAGGCATTTGCAGA
TGCCTTGCTCATCATTCCCAAGGTTCTTGCGCAAAACTCTGGTTTTGACCTTCAGGAAACATTA
GTTAAAGTTCAAGCTGAACATTCGGAATCCGGCCAGCTCGTAGGTGTGGATCTGAGCACAGGTG
AGCCGATGGTGGCTGCAGAGATGGGTGTGTGGGATAACTACTGTGTGAAGAAGCAGCTGCTACA
CTCCTGTACTGTGATCGCCACCAACATTCTCCTGGTCGACGAGATCATGCGAGCTGGGATGTCC
TCTCTGAAGGGTTGAGGCCTGCCTGTGATACTACAGGATGTTGGGGGGAATGGTTATTTTTGTC
CAAGCTTCAAGTGATTTGGAAAAAAATTTTCTCTTCCTGATTGGAGAAAAGAAACGGGACATTT
GACACCTATTCAAATTATACTGTAAAATTTTATTTTATTTTTGCCTTGAGTATCTGAAGACACT
CAAAGCAGCTCTTTTTCAACCCACTGAACAAGATGTTTTAGCTACACCGATACAAAAATTACAT
AAGATAAGCATGTTGTCTACCCTTGTTCCGTAAGTGTTCTTTGAAAGTTTGTAATGGTTTTCTC
CTAAATAAGGCATGGTGACACATGCCTGTAAGCCTAGCCCTTTGGAAATAGTCCGGAATTTCTA
TGCCAACTCAGGCTACAGGAGACCCCAGGTCGAAAGAATAATTTGTTGTGGATGTATTTGAAAT
TATCCAGCCAACTCCCTGTTAAACATGTAAGATCCTTGCCAGTGTAAAACACATCTGGGTAATT
TATGGGTTTCATAATGTCTAATAAATACTTAAAGAGTGAAGCTACTGGATCATTCACACTTGAA
ATGACTGAAAATGCTTCAGAAAAGCTAATAAAGCCAAGTTACTCCGTGGAGGCTGGAAGGTC

hide sequence

Protein Sequences


Protein RefSeqs	NP_033968	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH18459	(Get FASTA)	NCBI Sequence Viewer
	AAH69917	(Get FASTA)	NCBI Sequence Viewer
	AAH94352	(Get FASTA)	NCBI Sequence Viewer
	BAA81877	(Get FASTA)	NCBI Sequence Viewer
	BAE22141	(Get FASTA)	NCBI Sequence Viewer
	BAE27700	(Get FASTA)	NCBI Sequence Viewer
	BAE29065	(Get FASTA)	NCBI Sequence Viewer
	BAE30006	(Get FASTA)	NCBI Sequence Viewer
	BAE35369	(Get FASTA)	NCBI Sequence Viewer
	BAE35527	(Get FASTA)	NCBI Sequence Viewer
	BAE38294	(Get FASTA)	NCBI Sequence Viewer
	BAE39123	(Get FASTA)	NCBI Sequence Viewer
	BAE39184	(Get FASTA)	NCBI Sequence Viewer
	BAE39236	(Get FASTA)	NCBI Sequence Viewer
	BAE39305	(Get FASTA)	NCBI Sequence Viewer
	BAE39315	(Get FASTA)	NCBI Sequence Viewer
	BAE39411	(Get FASTA)	NCBI Sequence Viewer
	BAE39718	(Get FASTA)	NCBI Sequence Viewer
	BAE39984	(Get FASTA)	NCBI Sequence Viewer
	BAE40041	(Get FASTA)	NCBI Sequence Viewer
	BAE40748	(Get FASTA)	NCBI Sequence Viewer
	BAE40824	(Get FASTA)	NCBI Sequence Viewer
	CAA83432	(Get FASTA)	NCBI Sequence Viewer
	EDL19498	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000159385
GenBank Protein	P80317	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_033968 ⟸ NM_009838

- UniProtKB:

Q52KG9 (UniProtKB/TrEMBL), Q3TIX8 (UniProtKB/TrEMBL), Q3TW97 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLL
HEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKE
KALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIRKKDEPIDLFMVE
IMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEER
EKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIVALRRAKRRN
MERLTLACGGIALNSFDDLNPDCLGHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLVKGPNKHTL
TQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVALAEALIKYKPSVKGRAQLGVQAFADALLIIP
KVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLSTGEPMVAAEMGVWDNYCVKKQLLHSCTVIA
TNILLVDEIMRAGMSSLKG

hide sequence

Ensembl Acc Id:

ENSMUSP00000158738 ⟸ ENSMUST00000031402

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P80317-F1-model_v2	AlphaFold	P80317	1-531	view protein structure

Promoters

RGD ID:

6888190

Promoter ID:

EPDNEW_M7546

Type:

initiation region

Name:

Cct6a_1

Description:

Mus musculus chaperonin containing Tcp1, subunit 6a , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	129,787,403 - 129,787,463	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:107943	AgrOrtholog
Ensembl Genes	ENSMUSG00000029447	Ensembl, ENTREZGENE
Ensembl Transcript	ENSMUST00000201414	ENTREZGENE
Gene3D-CATH	1.10.560.10	UniProtKB/Swiss-Prot
	3.30.260.10	UniProtKB/Swiss-Prot
	3.50.7.10	UniProtKB/Swiss-Prot
InterPro	Chap_CCT_zeta	UniProtKB/Swiss-Prot
	Chaperone_TCP-1	UniProtKB/Swiss-Prot
	Chaperonin_TCP-1_CS	UniProtKB/Swiss-Prot
	Cpn60/TCP-1	UniProtKB/Swiss-Prot
	GroEL-like_apical_dom_sf	UniProtKB/Swiss-Prot
	GROEL-like_equatorial_sf	UniProtKB/Swiss-Prot
	TCP-1-like_intermed_sf	UniProtKB/Swiss-Prot
	TCP-1_chaperonin	UniProtKB/Swiss-Prot
KEGG Report	mmu:12466	UniProtKB/Swiss-Prot
MGD	MGI:107943	ENTREZGENE
NCBI Gene	12466	ENTREZGENE
PANTHER	PTHR11353	UniProtKB/Swiss-Prot
Pfam	Cpn60_TCP1	UniProtKB/Swiss-Prot
PhenoGen	Cct6a	PhenoGen
PRINTS	TCOMPLEXTCP1	UniProtKB/Swiss-Prot
PROSITE	TCP1_1	UniProtKB/Swiss-Prot
	TCP1_2	UniProtKB/Swiss-Prot
	TCP1_3	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF48592	UniProtKB/Swiss-Prot
	SSF52029	UniProtKB/Swiss-Prot
	SSF54849	UniProtKB/Swiss-Prot
UniProt	P80317	ENTREZGENE
	Q3TI05_MOUSE	UniProtKB/TrEMBL
	Q3TI62_MOUSE	UniProtKB/TrEMBL
	Q3TIX8	ENTREZGENE, UniProtKB/TrEMBL
	Q3TW97	ENTREZGENE, UniProtKB/TrEMBL
	Q52KG9	ENTREZGENE, UniProtKB/TrEMBL
	Q8VEI1_MOUSE	UniProtKB/TrEMBL
	TCPZ_MOUSE	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-07-04	Cct6a	chaperonin containing TCP1 subunit 6A	Cct6a	chaperonin containing Tcp1, subunit 6a (zeta)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar