ATP6V1G3 (ATPase H+ transporting V1 subunit G3) - Rat Genome Database

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Gene: ATP6V1G3 (ATPase H+ transporting V1 subunit G3) Homo sapiens
Analyze
Symbol: ATP6V1G3
Name: ATPase H+ transporting V1 subunit G3
RGD ID: 1312186
HGNC Page HGNC:18265
Description: Enables ATPase binding activity. Predicted to be involved in synaptic vesicle lumen acidification. Located in cytosol and plasma membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: ATP6G3; ATPase, H+ transporting, lysosomal (vacuolar proton pump) subunit G3; ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3; MGC119810; MGC119813; V-ATPase 13 kDa subunit 3; V-ATPase G subunit 3; V-ATPase G3 subunit; V-ATPase subunit G 3; V-type proton ATPase subunit G 3; vacuolar ATP synthase subunit G 3; vacuolar proton pump G subunit 3; vacuolar proton pump subunit G 3; vacuolar proton pump, subunit G3; Vma10
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381198,523,222 - 198,540,945 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1198,523,222 - 198,540,945 (-)EnsemblGRCh38hg38GRCh38
GRCh371198,492,352 - 198,510,075 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361196,758,975 - 196,776,698 (-)NCBINCBI36Build 36hg18NCBI36
Build 341195,224,010 - 195,241,732NCBI
Celera1171,614,921 - 171,632,643 (-)NCBICelera
Cytogenetic Map1q31.3NCBI
HuRef1169,659,548 - 169,677,275 (-)NCBIHuRef
CHM1_11199,914,674 - 199,932,396 (-)NCBICHM1_1
T2T-CHM13v2.01197,783,117 - 197,800,839 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1415677   PMID:2874839   PMID:9210392   PMID:9442887   PMID:10221984   PMID:10224039   PMID:10340843   PMID:10440860   PMID:11836511   PMID:12384298   PMID:12477932   PMID:12788495  
PMID:14580332   PMID:14597263   PMID:15489334   PMID:16710414   PMID:17360703   PMID:17662945   PMID:19366680   PMID:20139978   PMID:21873635   PMID:23648065   PMID:24968937   PMID:25013050  
PMID:28514442   PMID:32296183   PMID:33028803   PMID:34857952   PMID:35575683   PMID:37071682  


Genomics

Comparative Map Data
ATP6V1G3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381198,523,222 - 198,540,945 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1198,523,222 - 198,540,945 (-)EnsemblGRCh38hg38GRCh38
GRCh371198,492,352 - 198,510,075 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361196,758,975 - 196,776,698 (-)NCBINCBI36Build 36hg18NCBI36
Build 341195,224,010 - 195,241,732NCBI
Celera1171,614,921 - 171,632,643 (-)NCBICelera
Cytogenetic Map1q31.3NCBI
HuRef1169,659,548 - 169,677,275 (-)NCBIHuRef
CHM1_11199,914,674 - 199,932,396 (-)NCBICHM1_1
T2T-CHM13v2.01197,783,117 - 197,800,839 (-)NCBIT2T-CHM13v2.0
Atp6v1g3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391138,201,476 - 138,217,200 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1138,201,476 - 138,217,200 (+)EnsemblGRCm39 Ensembl
GRCm381138,273,738 - 138,289,462 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1138,273,738 - 138,289,462 (+)EnsemblGRCm38mm10GRCm38
MGSCv371140,170,315 - 140,186,039 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361140,090,149 - 140,105,873 (+)NCBIMGSCv36mm8
Celera1140,915,081 - 140,930,807 (+)NCBICelera
Cytogenetic Map1E4NCBI
cM Map160.82NCBI
Atp6v1g3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81352,351,787 - 52,376,784 (+)NCBIGRCr8
mRatBN7.21349,800,256 - 49,825,247 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1349,794,222 - 49,825,247 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1352,418,239 - 52,432,667 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01353,706,130 - 53,720,558 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01350,973,369 - 50,987,782 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01355,265,794 - 55,288,651 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1355,274,199 - 55,288,651 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01360,297,386 - 60,321,789 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41351,462,070 - 51,476,522 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11351,438,095 - 51,489,937 (+)NCBI
Celera1350,095,450 - 50,109,898 (+)NCBICelera
Cytogenetic Map13q13NCBI
Atp6v1g3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540634,910,498 - 34,927,745 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540634,910,498 - 34,927,745 (-)NCBIChiLan1.0ChiLan1.0
ATP6V1G3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2150,834,517 - 50,852,067 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1150,793,764 - 50,811,547 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01174,130,976 - 174,148,524 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11178,440,516 - 178,458,092 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1178,440,516 - 178,458,108 (-)Ensemblpanpan1.1panPan2
ATP6V1G3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.174,368,476 - 4,388,544 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl74,368,418 - 4,388,539 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha74,053,554 - 4,073,662 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.074,054,400 - 4,074,512 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl74,054,387 - 4,074,504 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.174,001,449 - 4,021,551 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.074,102,151 - 4,122,266 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.074,134,335 - 4,154,453 (+)NCBIUU_Cfam_GSD_1.0
Atp6v1g3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934476,227,144 - 76,242,234 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365675,461,760 - 5,476,879 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365675,461,760 - 5,476,893 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATP6V1G3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1021,371,257 - 21,410,296 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11021,371,302 - 21,394,817 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21026,048,320 - 26,071,801 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATP6V1G3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12530,867,341 - 30,886,380 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2530,868,161 - 30,886,540 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605531,756,940 - 31,775,447 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Atp6v1g3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247981,891,613 - 1,910,104 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247981,893,699 - 1,910,104 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ATP6V1G3
9 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 1q31.1-42.11(chr1:187143981-224299417)x3 copy number gain See cases [RCV000051857] Chr1:187143981..224299417 [GRCh38]
Chr1:187113113..224487119 [GRCh37]
Chr1:185379736..222553742 [NCBI36]
Chr1:1q31.1-42.11
pathogenic
GRCh38/hg38 1q25.2-32.1(chr1:179032905-199724897)x1 copy number loss See cases [RCV000053948] Chr1:179032905..199724897 [GRCh38]
Chr1:179002040..199694025 [GRCh37]
Chr1:177268663..197960648 [NCBI36]
Chr1:1q25.2-32.1
pathogenic
GRCh38/hg38 1q31.1-32.1(chr1:189034483-199615866)x1 copy number loss See cases [RCV000135590] Chr1:189034483..199615866 [GRCh38]
Chr1:189003614..199584994 [GRCh37]
Chr1:187270237..197851617 [NCBI36]
Chr1:1q31.1-32.1
pathogenic
GRCh37/hg19 1q31.3-42.13(chr1:197811907-228997888)x3 copy number gain See cases [RCV000240137] Chr1:197811907..228997888 [GRCh37]
Chr1:1q31.3-42.13
pathogenic
GRCh37/hg19 1q31.3-44(chr1:195483439-249213000)x3 copy number gain See cases [RCV000449172] Chr1:195483439..249213000 [GRCh37]
Chr1:1q31.3-44
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1q25.2-32.1(chr1:179413479-201764737)x1 copy number loss See cases [RCV000445748] Chr1:179413479..201764737 [GRCh37]
Chr1:1q25.2-32.1
pathogenic
GRCh37/hg19 1q25.2-32.1(chr1:179073386-200192265)x1 copy number loss See cases [RCV000448809] Chr1:179073386..200192265 [GRCh37]
Chr1:1q25.2-32.1
pathogenic
GRCh37/hg19 1q25.2-32.1(chr1:179011314-199022759)x1 copy number loss See cases [RCV000512128] Chr1:179011314..199022759 [GRCh37]
Chr1:1q25.2-32.1
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1q25.3-41(chr1:185644663-221698833)x3 copy number gain not provided [RCV000749265] Chr1:185644663..221698833 [GRCh37]
Chr1:1q25.3-41
pathogenic
GRCh37/hg19 1q25.2-32.1(chr1:177551193-199599056)x1 copy number loss not provided [RCV001005157] Chr1:177551193..199599056 [GRCh37]
Chr1:1q25.2-32.1
pathogenic
GRCh37/hg19 1q31.3-32.1(chr1:196315481-200200856)x1 copy number loss not provided [RCV000847068] Chr1:196315481..200200856 [GRCh37]
Chr1:1q31.3-32.1
uncertain significance
GRCh37/hg19 1q31.3-32.2(chr1:194356425-210988710)x3 copy number gain not provided [RCV001249273] Chr1:194356425..210988710 [GRCh37]
Chr1:1q31.3-32.2
not provided
NC_000001.10:g.(?_130980840)_(248900000_?)dup duplication Gastrointestinal stromal tumor [RCV001300221]|Parathyroid carcinoma [RCV001341077] Chr1:130980840..248900000 [GRCh37]
Chr1:1q12-44
uncertain significance
GRCh37/hg19 1q25.2-32.1(chr1:179413479-201764737) copy number loss not specified [RCV002053780] Chr1:179413479..201764737 [GRCh37]
Chr1:1q25.2-32.1
pathogenic
GRCh37/hg19 1q25.2-32.1(chr1:179073386-200192265) copy number loss not specified [RCV002053769] Chr1:179073386..200192265 [GRCh37]
Chr1:1q25.2-32.1
pathogenic
GRCh37/hg19 1q31.3-44(chr1:197867914-249224684)x3 copy number gain See cases [RCV002287837] Chr1:197867914..249224684 [GRCh37]
Chr1:1q31.3-44
pathogenic
GRCh37/hg19 1q25.3-44(chr1:182388773-249111240)x3 copy number gain not provided [RCV000845852] Chr1:182388773..249111240 [GRCh37]
Chr1:1q25.3-44
pathogenic
NM_001376861.1(ATP6V1G3):c.13T>C (p.Ser5Pro) single nucleotide variant not specified [RCV004164844] Chr1:198540638 [GRCh38]
Chr1:198509768 [GRCh37]
Chr1:1q31.3
uncertain significance
NM_001376861.1(ATP6V1G3):c.316A>G (p.Met106Val) single nucleotide variant not specified [RCV004192559] Chr1:198523432 [GRCh38]
Chr1:198492562 [GRCh37]
Chr1:1q31.3
likely benign
NM_001376861.1(ATP6V1G3):c.295C>A (p.Leu99Ile) single nucleotide variant not specified [RCV004081947] Chr1:198523453 [GRCh38]
Chr1:198492583 [GRCh37]
Chr1:1q31.3
uncertain significance
NM_001376861.1(ATP6V1G3):c.229A>G (p.Thr77Ala) single nucleotide variant not specified [RCV004342692] Chr1:198523519 [GRCh38]
Chr1:198492649 [GRCh37]
Chr1:1q31.3
uncertain significance
GRCh37/hg19 1q31.2-32.1(chr1:193011753-199882947)x1 copy number loss not provided [RCV002474543] Chr1:193011753..199882947 [GRCh37]
Chr1:1q31.2-32.1
pathogenic
GRCh37/hg19 1q31.1-32.1(chr1:189633885-199854163)x1 copy number loss not provided [RCV002472500] Chr1:189633885..199854163 [GRCh37]
Chr1:1q31.1-32.1
likely pathogenic
GRCh37/hg19 1q25.3-32.3(chr1:181453460-213107248)x3 copy number gain not provided [RCV002475637] Chr1:181453460..213107248 [GRCh37]
Chr1:1q25.3-32.3
pathogenic
NM_001376861.1(ATP6V1G3):c.178T>C (p.Ser60Pro) single nucleotide variant not specified [RCV004185409] Chr1:198529086 [GRCh38]
Chr1:198498216 [GRCh37]
Chr1:1q31.3
uncertain significance
NM_001376861.1(ATP6V1G3):c.347C>G (p.Ala116Gly) single nucleotide variant not specified [RCV004335413] Chr1:198523401 [GRCh38]
Chr1:198492531 [GRCh37]
Chr1:1q31.3
uncertain significance
NM_001376861.1(ATP6V1G3):c.22A>C (p.Ile8Leu) single nucleotide variant not specified [RCV004418793] Chr1:198540629 [GRCh38]
Chr1:198509759 [GRCh37]
Chr1:1q31.3
uncertain significance
NM_001376861.1(ATP6V1G3):c.302G>A (p.Ser101Asn) single nucleotide variant not specified [RCV004418795] Chr1:198523446 [GRCh38]
Chr1:198492576 [GRCh37]
Chr1:1q31.3
uncertain significance
NC_000001.10:g.(?_190829412)_(216061974_?)del deletion not provided [RCV004579260] Chr1:190829412..216061974 [GRCh37]
Chr1:1q31.2-41
pathogenic
GRCh37/hg19 1q31.3-32.1(chr1:198307100-198818073)x3 copy number gain not provided [RCV003484047] Chr1:198307100..198818073 [GRCh37]
Chr1:1q31.3-32.1
uncertain significance
GRCh37/hg19 1q31.3-32.1(chr1:197216705-203683110)x1 copy number loss not specified [RCV003986384] Chr1:197216705..203683110 [GRCh37]
Chr1:1q31.3-32.1
likely pathogenic
NM_001376861.1(ATP6V1G3):c.254A>G (p.Asn85Ser) single nucleotide variant not specified [RCV004418794] Chr1:198523494 [GRCh38]
Chr1:198492624 [GRCh37]
Chr1:1q31.3
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:420
Count of miRNA genes:224
Interacting mature miRNAs:227
Transcripts:ENST00000281087, ENST00000309309, ENST00000367381, ENST00000367382, ENST00000489986
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597249209GWAS1345283_Hplatelet-to-lymphocyte ratio QTL GWAS1345283 (human)5e-08platelet-to-lymphocyte ratio1198529654198529655Human


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
44 113 34 55 271 89 350 168 445 26 106 917 669 28 194 417 404 162 145

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001320218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_133262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_133326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC212752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI791754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL157402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY039760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF509031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX114684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000281087   ⟹   ENSP00000281087
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1198,523,224 - 198,540,945 (-)Ensembl
Ensembl Acc Id: ENST00000309309   ⟹   ENSP00000309574
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1198,523,222 - 198,540,945 (-)Ensembl
Ensembl Acc Id: ENST00000367382   ⟹   ENSP00000356352
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1198,523,222 - 198,540,680 (-)Ensembl
Ensembl Acc Id: ENST00000489986   ⟹   ENSP00000417171
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1198,523,341 - 198,540,674 (-)Ensembl
RefSeq Acc Id: NM_001320218   ⟹   NP_001307147
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381198,523,222 - 198,540,945 (-)NCBI
CHM1_11199,914,674 - 199,932,396 (-)NCBI
T2T-CHM13v2.01197,783,117 - 197,800,839 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376861   ⟹   NP_001363790
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381198,523,222 - 198,540,680 (-)NCBI
T2T-CHM13v2.01197,783,117 - 197,800,574 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376862   ⟹   NP_001363791
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381198,523,222 - 198,540,680 (-)NCBI
T2T-CHM13v2.01197,783,117 - 197,800,574 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376863   ⟹   NP_001363792
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381198,523,222 - 198,540,680 (-)NCBI
T2T-CHM13v2.01197,783,117 - 197,800,574 (-)NCBI
Sequence:
RefSeq Acc Id: NM_133262   ⟹   NP_573569
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381198,523,222 - 198,540,945 (-)NCBI
GRCh371198,492,352 - 198,510,075 (-)RGD
GRCh371198,492,352 - 198,510,075 (-)NCBI
Build 361196,758,975 - 196,776,698 (-)NCBI Archive
Celera1171,614,921 - 171,632,643 (-)RGD
HuRef1169,659,548 - 169,677,275 (-)ENTREZGENE
CHM1_11199,914,674 - 199,932,396 (-)NCBI
T2T-CHM13v2.01197,783,117 - 197,800,839 (-)NCBI
Sequence:
RefSeq Acc Id: NM_133326   ⟹   NP_579872
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381198,523,222 - 198,540,945 (-)NCBI
GRCh371198,492,352 - 198,510,075 (-)RGD
Build 361196,758,975 - 196,776,698 (-)NCBI Archive
Celera1171,614,921 - 171,632,643 (-)RGD
HuRef1169,659,548 - 169,677,275 (-)ENTREZGENE
CHM1_11199,914,674 - 199,932,396 (-)NCBI
T2T-CHM13v2.01197,783,117 - 197,800,839 (-)NCBI
Sequence:
RefSeq Acc Id: NP_573569   ⟸   NM_133262
- Peptide Label: isoform a
- UniProtKB: Q96LB4 (UniProtKB/Swiss-Prot),   Q495K4 (UniProtKB/Swiss-Prot),   Q495K2 (UniProtKB/Swiss-Prot),   Q5T9L6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_579872   ⟸   NM_133326
- Peptide Label: isoform b
- UniProtKB: Q96LB4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001307147   ⟸   NM_001320218
- Peptide Label: isoform c
- UniProtKB: Q96LB4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001363790   ⟸   NM_001376861
- Peptide Label: isoform a
- UniProtKB: Q96LB4 (UniProtKB/Swiss-Prot),   Q495K4 (UniProtKB/Swiss-Prot),   Q495K2 (UniProtKB/Swiss-Prot),   Q5T9L6 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001363791   ⟸   NM_001376862
- Peptide Label: isoform c
RefSeq Acc Id: NP_001363792   ⟸   NM_001376863
- Peptide Label: isoform b
Ensembl Acc Id: ENSP00000309574   ⟸   ENST00000309309
Ensembl Acc Id: ENSP00000281087   ⟸   ENST00000281087
Ensembl Acc Id: ENSP00000356352   ⟸   ENST00000367382
Ensembl Acc Id: ENSP00000417171   ⟸   ENST00000489986

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q96LB4-F1-model_v2 AlphaFold Q96LB4 1-118 view protein structure

Promoters
RGD ID:6858500
Promoter ID:EPDNEW_H2415
Type:multiple initiation site
Name:ATP6V1G3_2
Description:ATPase H+ transporting V1 subunit G3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H2416  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381198,540,680 - 198,540,740EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:18265 AgrOrtholog
COSMIC ATP6V1G3 COSMIC
Ensembl Genes ENSG00000151418 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSG00000263014 UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000281087 ENTREZGENE
  ENST00000281087.6 UniProtKB/Swiss-Prot
  ENST00000309309 ENTREZGENE
  ENST00000309309.11 UniProtKB/Swiss-Prot
  ENST00000367381.2 UniProtKB/Swiss-Prot
  ENST00000367382 ENTREZGENE
  ENST00000367382.6 UniProtKB/Swiss-Prot
  ENST00000489986 ENTREZGENE
  ENST00000489986.1 UniProtKB/Swiss-Prot
  ENST00000571439.5 UniProtKB/Swiss-Prot
  ENST00000573121.5 UniProtKB/Swiss-Prot
  ENST00000575971.5 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.5.2950 UniProtKB/Swiss-Prot
GTEx ENSG00000151418 GTEx
  ENSG00000263014 GTEx
HGNC ID HGNC:18265 ENTREZGENE
Human Proteome Map ATP6V1G3 Human Proteome Map
InterPro V-ATPase_G UniProtKB/Swiss-Prot
KEGG Report hsa:127124 UniProtKB/Swiss-Prot
NCBI Gene 127124 ENTREZGENE
OMIM 618071 OMIM
PANTHER PTHR12713 UniProtKB/Swiss-Prot
  V-TYPE PROTON ATPASE SUBUNIT G 3 UniProtKB/Swiss-Prot
Pfam V-ATPase_G UniProtKB/Swiss-Prot
PharmGKB PA38515 PharmGKB
UniProt Q495K2 ENTREZGENE
  Q495K4 ENTREZGENE
  Q5T9L6 ENTREZGENE
  Q96LB4 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q495K2 UniProtKB/Swiss-Prot
  Q495K4 UniProtKB/Swiss-Prot
  Q5T9L6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-16 ATP6V1G3  ATPase H+ transporting V1 subunit G3  ATP6V1G3  ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3  Symbol and/or name change 5135510 APPROVED