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Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Slc17a9 | Rat | Porokeratosis, Disseminated Superficial Actinic, 8 | | ISO | SLC17A9 (Homo sapiens) | 7240710 | | OMIM | | |
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Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Slc17a9 | Rat | Porokeratosis, Disseminated Superficial Actinic, 8 | | ISO | SLC17A9 (Homo sapiens) | 7240710 | | OMIM | | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | GOA pipeline | RGD automated data pipeline |
3. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
4. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
5. | Identification of a vesicular nucleotide transporter. | Sawada K, etal., Proc Natl Acad Sci U S A. 2008 Apr 15;105(15):5683-6. doi: 10.1073/pnas.0800141105. Epub 2008 Mar 28. |
PMID:21810784 | PMID:24912190 | PMID:24989000 | PMID:25043192 | PMID:29282210 | PMID:31810015 |
Slc17a9 (Rattus norvegicus - Norway rat) |
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SLC17A9 (Homo sapiens - human) |
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Slc17a9 (Mus musculus - house mouse) |
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Slc17a9 (Chinchilla lanigera - long-tailed chinchilla) |
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SLC17A9 (Pan paniscus - bonobo/pygmy chimpanzee) |
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SLC17A9 (Canis lupus familiaris - dog) |
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Slc17a9 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SLC17A9 (Sus scrofa - pig) |
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SLC17A9 (Chlorocebus sabaeus - green monkey) |
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Slc17a9 (Heterocephalus glaber - naked mole-rat) |
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Variants in Slc17a9
23 total Variants ![]() |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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9 | 11 | 49 | 113 | 91 | 90 | 59 | 25 | 59 | 6 | 218 | 97 | 93 | 45 | 60 | 31 |
RefSeq Transcripts | NM_001108613 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006235771 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039105555 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039105556 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039105558 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039105559 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063284238 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063284239 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063284240 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063284241 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_010064669 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | CH474066 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
FQ226021 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000003 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000013623 ⟹ ENSRNOP00000013621 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001108613 ⟹ NP_001102083 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039105555 ⟹ XP_038961483 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039105556 ⟹ XP_038961484 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039105558 ⟹ XP_038961486 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039105559 ⟹ XP_038961487 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_063284238 ⟹ XP_063140308 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063284239 ⟹ XP_063140309 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063284240 ⟹ XP_063140310 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063284241 ⟹ XP_063140311 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_010064669 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001102083 | (Get FASTA) | NCBI Sequence Viewer |
XP_038961483 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038961484 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038961486 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038961487 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063140308 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063140309 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063140310 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063140311 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | EDL88787 | (Get FASTA) | NCBI Sequence Viewer |
EDL88788 | (Get FASTA) | NCBI Sequence Viewer | |
EDL88789 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000013621 | ||
ENSRNOP00000013621.4 | |||
ENSRNOP00000104893 | |||
ENSRNOP00055001423 | |||
ENSRNOP00060001316 | |||
ENSRNOP00065018776 | |||
GenBank Protein | P0DX21 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001102083 ⟸ NM_001108613 |
- UniProtKB: | P0DX21 (UniProtKB/Swiss-Prot), D3ZUN1 (UniProtKB/TrEMBL), A6KM79 (UniProtKB/TrEMBL) |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000013621 ⟸ ENSRNOT00000013623 |
RefSeq Acc Id: | XP_038961484 ⟸ XM_039105556 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | XP_038961483 ⟸ XM_039105555 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038961487 ⟸ XM_039105559 |
- Peptide Label: | isoform X8 |
RefSeq Acc Id: | XP_038961486 ⟸ XM_039105558 |
- Peptide Label: | isoform X6 |
RefSeq Acc Id: | XP_063140308 ⟸ XM_063284238 |
- Peptide Label: | isoform X2 |
- UniProtKB: | P0DX21 (UniProtKB/Swiss-Prot), A6KM79 (UniProtKB/TrEMBL), D3ZUN1 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_063140309 ⟸ XM_063284239 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_063140310 ⟸ XM_063284240 |
- Peptide Label: | isoform X5 |
RefSeq Acc Id: | XP_063140311 ⟸ XM_063284241 |
- Peptide Label: | isoform X7 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-D3ZUN1-F1-model_v2 | AlphaFold | D3ZUN1 | 1-447 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13692741 | ||||||||
Promoter ID: | EPDNEW_R3266 | ||||||||
Type: | initiation region | ||||||||
Name: | Slc17a9_1 | ||||||||
Description: | solute carrier family 17 member 9 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1311940 | AgrOrtholog |
BioCyc Gene | G2FUF-46321 | BioCyc |
Ensembl Genes | ENSRNOG00000010275 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot |
ENSRNOG00055001105 | UniProtKB/Swiss-Prot | |
ENSRNOG00060001442 | UniProtKB/Swiss-Prot | |
ENSRNOG00065014571 | UniProtKB/Swiss-Prot | |
Ensembl Transcript | ENSRNOT00000013623 | ENTREZGENE |
ENSRNOT00000013623.6 | UniProtKB/Swiss-Prot | |
ENSRNOT00000166635 | ENTREZGENE | |
ENSRNOT00055001823 | UniProtKB/Swiss-Prot | |
ENSRNOT00060002121 | UniProtKB/Swiss-Prot | |
ENSRNOT00065024074 | UniProtKB/Swiss-Prot | |
Gene3D-CATH | MFS general substrate transporter like domains | UniProtKB/Swiss-Prot |
InterPro | MFS | UniProtKB/Swiss-Prot |
MFS_dom | UniProtKB/Swiss-Prot | |
MFS_Na/Anion_cotransporter | UniProtKB/Swiss-Prot | |
MFS_trans_sf | UniProtKB/Swiss-Prot | |
SLC17A9-like | UniProtKB/Swiss-Prot | |
Sugar_transporter_CS | UniProtKB/Swiss-Prot | |
KEGG Report | rno:362287 | UniProtKB/Swiss-Prot |
NCBI Gene | 362287 | ENTREZGENE |
PANTHER | SOLUTE CARRIER FAMILY 17 | UniProtKB/Swiss-Prot |
SOLUTE CARRIER FAMILY 17 MEMBER 9 | UniProtKB/Swiss-Prot | |
Pfam | MFS_1 | UniProtKB/Swiss-Prot |
PhenoGen | Slc17a9 | PhenoGen |
PROSITE | MFS | UniProtKB/Swiss-Prot |
SUGAR_TRANSPORT_2 | UniProtKB/Swiss-Prot | |
RatGTEx | ENSRNOG00000010275 | RatGTEx |
ENSRNOG00055001105 | RatGTEx | |
ENSRNOG00060001442 | RatGTEx | |
ENSRNOG00065014571 | RatGTEx | |
Superfamily-SCOP | MFS general substrate transporter | UniProtKB/Swiss-Prot |
UniProt | A6KM79 | ENTREZGENE, UniProtKB/TrEMBL |
D3ZUN1 | ENTREZGENE, UniProtKB/TrEMBL | |
P0DX21 | ENTREZGENE, UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2016-02-25 | Slc17a9 | solute carrier family 17 member 9 | Slc17a9 | solute carrier family 17 (vesicular nucleotide transporter), member 9 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2013-08-02 | Slc17a9 | solute carrier family 17 (vesicular nucleotide transporter), member 9 | Slc17a9 | solute carrier family 17, member 9 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2010-04-23 | Slc17a9 | solute carrier family 17, member 9 | RGD1311940 | similar to bA305P22.2.1 (novel protein, isoform 1) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-04-30 | RGD1311940 | similar to bA305P22.2.1 (novel protein, isoform 1) | RGD1311940_predicted | similar to bA305P22.2.1 (novel protein, isoform 1) (predicted) | 'predicted' is removed | 2292626 | APPROVED |
2005-01-20 | RGD1311940_predicted | similar to bA305P22.2.1 (novel protein, isoform 1) (predicted) | LOC362287_predicted | Symbol and Name status set to approved | 1331353 | APPROVED | |
2005-01-12 | LOC362287_predicted | similar to bA305P22.2.1 (novel protein, isoform 1) (predicted) | Symbol and Name status set to provisional | 70820 | PROVISIONAL |