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Gene: B3galt1 (Beta-1,3-galactosyltransferase 1) Rattus norvegicus

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Symbol:

B3galt1

Name:

Beta-1,3-galactosyltransferase 1

RGD ID:

1311898

Description:

Predicted to enable N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity. Predicted to be involved in galactosylceramide biosynthetic process; lipid glycosylation; and protein O-linked glycosylation. Predicted to act upstream of or within oligosaccharide biosynthetic process. Predicted to be located in Golgi apparatus and membrane. Predicted to be active in Golgi membrane. Orthologous to human B3GALT1 (beta-1,3-galactosyltransferase 1); PARTICIPATES IN lacto-series glycosphingolipid metabolic pathway; INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC366064; UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1; UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	B3GALT1 (beta-1,3-galactosyltransferase 1)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB
Mus musculus (house mouse):	B3galt1 (UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	B3galt1 (beta-1,3-galactosyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	B3GALT1 (beta-1,3-galactosyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	B3GALT1 (beta-1,3-galactosyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	B3galt1 (beta-1,3-galactosyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	B3GALT1 (beta-1,3-galactosyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	B3GALT1 (beta-1,3-galactosyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	B3galt1 (beta-1,3-galactosyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	SUSD3 (sushi domain containing 3)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	B3GALT1 (beta-1,3-galactosyltransferase 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	B3galt1 (UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	b3galt1b (UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	b3galt1a (UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	B0024.15	Alliance	DIOPT (Hieranoid\|InParanoid\|SonicParanoid)
Caenorhabditis elegans (roundworm):	B0024.15	Alliance	DIOPT (InParanoid\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG30036	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|PANTHER)
Drosophila melanogaster (fruit fly):	CG30037	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|PANTHER)
Drosophila melanogaster (fruit fly):	GalT1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	brn	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	brn	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|SonicParanoid)
Caenorhabditis elegans (roundworm):	bre-5	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	bre-5	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|SonicParanoid)
Caenorhabditis elegans (roundworm):	bus-17	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Drosophila melanogaster (fruit fly):	CG8673	Alliance	DIOPT (Hieranoid\|InParanoid\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	b3galt1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	b3galt1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	72,661,410 - 73,234,447 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	72,660,801 - 73,235,276 (+)	Ensembl				GRCr8
mRatBN7.2	3	52,253,413 - 52,826,508 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	52,253,618 - 52,825,313 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	56,198,294 - 56,211,631 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	64,781,856 - 64,795,193 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	62,548,152 - 62,561,508 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	53,699,409 - 54,269,612 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	54,253,949 - 54,267,292 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	60,870,422 - 60,883,765 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	50,146,767 - 50,160,110 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	52,380,792 - 52,394,125 (+)	NCBI		Celera
RGSC_v3.1	3	50,054,001 - 50,055,718 (+)	NCBI
Cytogenetic Map	3	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

prostate cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(1->4)-beta-D-glucan (ISO)

1,2-dichloroethane (ISO)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

ciguatoxin CTX1B (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

diclofenac (ISO)

endosulfan (EXP)

ethanol (ISO)

genistein (ISO)

glyphosate (EXP)

lipopolysaccharide (ISO)

maneb (ISO)

methimazole (EXP)

mono(2-ethylhexyl) phthalate (EXP)

N-methyl-N-nitrosourea (EXP)

nitrofen (EXP)

O-methyleugenol (ISO)

okadaic acid (ISO)

paracetamol (EXP)

paraquat (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

potassium dichromate (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

rotenone (ISO)

senecionine (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

tetrachloromethane (EXP,ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

tributylstannane (ISO)

trichloroethene (EXP)

triclosan (ISO)

troglitazone (ISO)

tunicamycin (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

galactosylceramide biosynthetic process (ISO)

lipid metabolic process (IEA)

obsolete lipid glycosylation (IBA,ISO)

oligosaccharide biosynthetic process (ISO)

protein glycosylation (IEA)

protein O-linked glycosylation (IBA)

Cellular Component

Golgi apparatus (IEA)

Golgi membrane (IBA,IEA,ISO)

membrane (IEA)

Molecular Function

glycosyltransferase activity (IEA)

hexosyltransferase activity (IEA)

N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (IBA,ISO)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

lacto-series glycosphingolipid metabolic pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9417047	PMID:9582303	PMID:11042173

Genomics

Comparative Map Data

B3galt1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	72,661,410 - 73,234,447 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	72,660,801 - 73,235,276 (+)	Ensembl				GRCr8
mRatBN7.2	3	52,253,413 - 52,826,508 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	52,253,618 - 52,825,313 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	56,198,294 - 56,211,631 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	64,781,856 - 64,795,193 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	62,548,152 - 62,561,508 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	53,699,409 - 54,269,612 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	54,253,949 - 54,267,292 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	60,870,422 - 60,883,765 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	50,146,767 - 50,160,110 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	52,380,792 - 52,394,125 (+)	NCBI		Celera
RGSC_v3.1	3	50,054,001 - 50,055,718 (+)	NCBI
Cytogenetic Map	3	q21	NCBI

B3GALT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	167,293,001 - 167,874,045 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	167,293,001 - 167,874,045 (+)	Ensembl			hg38	GRCh38
GRCh37	2	168,149,511 - 168,730,555 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	168,383,428 - 168,435,612 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	168,500,688 - 168,552,873	NCBI
Celera	2	162,284,031 - 162,336,209 (+)	NCBI		Celera
Cytogenetic Map	2	q24.3	NCBI
HuRef	2	160,555,235 - 160,607,422 (+)	NCBI		HuRef
CHM1_1	2	168,681,070 - 168,733,250 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	167,750,886 - 168,331,887 (+)	NCBI		T2T-CHM13v2.0

B3galt1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	67,395,528 - 67,953,226 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	67,396,215 - 67,953,033 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	67,565,689 - 68,122,882 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	67,565,871 - 68,122,689 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	67,955,770 - 67,960,747 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	67,918,567 - 67,923,529 (+)	NCBI		MGSCv36	mm8
Celera	2	69,793,879 - 69,798,856 (+)	NCBI		Celera
Cytogenetic Map	2	C1.3	NCBI
cM Map	2	39.53	NCBI

B3galt1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955449	6,452,189 - 6,553,158 (-)	Ensembl
ChiLan1.0	NW_004955449	6,452,189 - 7,007,329 (-)	NCBI	ChiLan1.0	ChiLan1.0

B3GALT1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	69,934,878 - 70,509,330 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	69,949,742 - 70,524,307 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	54,550,248 - 55,124,358 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	172,023,342 - 172,591,939 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2

B3GALT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	36	12,263,162 - 12,766,525 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	36	12,761,821 - 12,762,801 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	36	12,336,938 - 12,775,614 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	36	12,384,303 - 12,888,766 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
UMICH_Zoey_3.1	36	12,470,747 - 12,974,000 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	36	12,449,918 - 12,953,890 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	36	12,567,513 - 13,071,386 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

B3galt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	129,484,141 - 130,096,334 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936469	11,589,492 - 11,590,472 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936469	11,586,710 - 12,133,053 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

B3GALT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	74,335,112 - 74,339,380 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	73,772,833 - 74,340,060 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	82,904,443 - 83,311,307 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

B3GALT1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	52,792,505 - 53,368,536 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	53,366,522 - 53,367,499 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666040	146,179,848 - 146,733,016 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

B3galt1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624787	5,578,168 - 5,579,148 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624787	5,040,161 - 5,582,911 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in B3galt1
5905 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	171
Count of miRNA genes:	119
Interacting mature miRNAs:	152
Transcripts:	ENSRNOT00000010018
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300178	Hrtrt4	Heart rate QTL 4	3.74		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	51490129	111359995	Rat
634317	Bw117	Body weight QTL 117	3.58		abdominal fat pad mass (VT:1000711)	abdominal fat pad weight to body weight ratio (CMO:0000095)	3	59863663	73704481	Rat
1331795	Rf30	Renal function QTL 30	3.708		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	3	59863663	87321459	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
1354589	Bw31	Body weight QTL 31	3.3		body mass (VT:0001259)	body weight (CMO:0000012)	3	53651826	98651826	Rat
2303593	Gluco46	Glucose level QTL 46	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	48876619	93876619	Rat
1354590	Despr11	Despair related QTL 11		0.000031	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	3	48876619	93876619	Rat
2298542	Neuinf11	Neuroinflammation QTL 11	3.9		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	3	35403199	97383526	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	58601291	153936591	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	49872657	138829559	Rat
631832	Sach1	Saccharin preference QTL 1	2.7	0.02	consumption behavior trait (VT:0002069)	calculated saccharin drink intake volume (CMO:0001600)	3	47904172	92904172	Rat
1331777	Bw24	Body weight QTL 24	3.503		body mass (VT:0001259)	body weight (CMO:0000012)	3	59863663	87321459	Rat
631647	Bp122	Blood pressure QTL 122	6.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	51092561	96092561	Rat
1300169	Bp177	Blood pressure QTL 177	2.96		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	3	36425116	81425116	Rat
9590286	Uminl1	Urine mineral level QTL 1	3.5	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	3	48657744	93657744	Rat
724523	Tsu1	Thymus enlargement suppressive QTL 1	3.84		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	3	70845569	136091483	Rat
4889966	Bss95	Bone structure and strength QTL 95	4.4		tibia area (VT:1000281)	tibia-fibula cross-sectional area (CMO:0001718)	3	37796919	82796919	Rat
2302276	Bw82	Body weight QTL 82	4.32		body mass (VT:0001259)	body weight (CMO:0000012)	3	59863663	83358329	Rat
2292613	Ept16	Estrogen-induced pituitary tumorigenesis QTL 16	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	67641995	130815812	Rat
738019	Anxrr10	Anxiety related response QTL 10	3.9		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	3	58925062	103925062	Rat
631841	Niddm39	Non-insulin dependent diabetes mellitus QTL 39	3.36		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	70311536	115311536	Rat
9590136	Scort3	Serum corticosterone level QTL 3	23.37	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	48657744	93657744	Rat
61419	Cia11	Collagen induced arthritis QTL 11	5.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	3	50766145	95766145	Rat
61356	Bp37	Blood pressure QTL 37	3		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	3	51092561	96092561	Rat
1558650	Cm48	Cardiac mass QTL 48	4	0.0001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	3	50766145	95766145	Rat
1358905	Hrtrt17	Heart rate QTL 17	5.9	0.000014	heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	36721849	110333156	Rat
8694196	Abfw2	Abdominal fat weight QTL 2	16.58	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	3	48657744	93657744	Rat
1354597	Kidm13	Kidney mass QTL 13	2.9		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	3	42158111	124558371	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	1	141509147	Rat
2325840	Bp345	Blood pressure QTL 345		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	38708931	83708931	Rat
8552950	Pigfal12	Plasma insulin-like growth factor 1 level QTL 12	7.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	3	48657744	93657744	Rat
631676	Cm8	Cardiac mass QTL 8	7.03	0.0001	aorta mass (VT:0002845)	aorta weight (CMO:0000076)	3	37363734	82363734	Rat
2290452	Scl56	Serum cholesterol level QTL 56	2.26		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	3	36101403	81101403	Rat
8694386	Bw159	Body weight QTL 159	4.52	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	3	48657744	93657744	Rat
1354604	Bw36	Body weight QTL 36	2.9		body mass (VT:0001259)	body weight (CMO:0000012)	3	42158111	124558371	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	5675975	141509147	Rat
1358186	Ept2	Estrogen-induced pituitary tumorigenesis QTL 2	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	67641995	130815812	Rat

Markers in Region

B3galt1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	52,821,922 - 52,822,503 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	54,265,027 - 54,265,607	NCBI	Rnor6.0
Rnor_5.0	3	60,881,500 - 60,882,080	UniSTS	Rnor5.0
Celera	3	52,391,860 - 52,392,440	UniSTS
Cytogenetic Map	3	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
11	12	66	151	89	84	59	34	59	6	276	133	11	129	65	91	25	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_197780	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_197781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_197782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591942	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591946	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105589	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105590	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284266	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284268	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284269	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000010018 ⟹ ENSRNOP00000010018

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	72,661,233 - 73,235,275 (+)	Ensembl
mRatBN7.2 Ensembl	3	52,810,845 - 52,824,188 (+)	Ensembl
Rnor_6.0 Ensembl	3	54,253,949 - 54,267,292 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097712 ⟹ ENSRNOP00000086959

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	73,181,139 - 73,234,628 (+)	Ensembl
mRatBN7.2 Ensembl	3	52,764,511 - 52,825,313 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102600 ⟹ ENSRNOP00000090409

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	72,661,393 - 73,234,628 (+)	Ensembl
mRatBN7.2 Ensembl	3	52,253,618 - 52,825,313 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000125515 ⟹ ENSRNOP00000112461

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	72,661,044 - 73,235,275 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000138050 ⟹ ENSRNOP00000106104

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	72,660,801 - 73,235,276 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000160916 ⟹ ENSRNOP00000101475

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	72,661,391 - 73,235,275 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000162858 ⟹ ENSRNOP00000100957

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	72,661,230 - 73,235,275 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000167879 ⟹ ENSRNOP00000098763

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	72,661,044 - 73,235,275 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000170985 ⟹ ENSRNOP00000104470

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	72,991,713 - 73,234,444 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000172616 ⟹ ENSRNOP00000102829

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	72,660,933 - 73,235,276 (+)	Ensembl

RefSeq Acc Id:

NM_001108954 ⟹ NP_001102424

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	73,218,784 - 73,232,127 (+)	NCBI
mRatBN7.2	3	52,810,845 - 52,824,188 (+)	NCBI
Rnor_6.0	3	54,253,949 - 54,267,292 (+)	NCBI
Rnor_5.0	3	60,870,422 - 60,883,765 (+)	NCBI
RGSC_v3.4	3	50,146,767 - 50,160,110 (+)	RGD
Celera	3	52,380,792 - 52,394,125 (+)	RGD

Sequence:

show sequence

AGGGATAATCACTCAGCAGGCTGGGTTCCTTCAAGGGCTGTGGTAATGAGTTCTGAGGAAGATT
TCTGAGGCTTGGAGCTTCCATCGGGTTTGGAAGAAAGTAAAGTGAATTCCATGATGCCACAGCA
CAAATAAAGCCCATGGACACCCACCAAGCAATTCCTCTCTGGCAGAATTTTTAGATTGCCGAGT
AATATGCTGCCTTCGCGAGGGGGCAAGAAACTAGTGCCCAAAAGACGTGTTCTTCAGTATTTGG
ATTAGACGCGTTCTGAAGAAAATGGCGTCAAAGGTTTCCTGCCTGTATGTGTTGACCGTTGTGT
GCTGGGCCAGCGCTCTCTGGTACTTAAGCATAACAAGACCTACTTCATCATACACTGGCTCAAA
GCCATTCAGTCACCTAACAGTTGCCAGGAAAAACTTCACGTTTGGCAACATAAGAACTCGACCT
ATAAACCCACATTCTTTTGAGTTTCTTATAAATGAACCCAACAAATGTGAGAAAAACATTCCTT
TTCTTGTGATCCTCATTAGCACCACCCACAAGGAATTTGATGCCCGCCAGGCAATCCGGGAGAC
TTGGGGGGATGAGAACAACTTCAAAGGGATCAAGATAGCCACGCTTTTCCTCCTGGGCAAAAAT
GCTGATCCTGTTCTCAACCAGATGGTGGAGCAAGAGAGCCAGATCTTCCATGACATCATCGTGG
AGGACTTCATTGACTCCTACCACAACCTCACCCTCAAAACCTTAATGGGGATGAGATGGGTTGC
CACCTTCTGCTCAAAAGCCAAGTATGTCATGAAAACAGACAGTGACATTTTTGTGAACATGGAC
AACCTTATTTATAAACTCCTGAAACCCTCTACCAAGCCGAGAAGAAGATATTTCACTGGTTACG
TCATCAATGGCGGGCCAATCAGGGATGTCCGCAGTAAGTGGTATATGCCTAGGGATTTGTACCC
TGACAGCAACTACCCACCGTTCTGTTCGGGGACTGGCTATATCTTTTCCGCTGATGTGGCAGAA
CTCATTTACAAGACCTCACTCCACACCAGGCTGCTTCATCTTGAAGATGTGTATGTGGGACTGT
GTCTTCGAAAGCTGGGCATACATCCTTTCCAGAATAGTGGCTTCAATCACTGGAAAATGGCCTA
CAGTTTGTGTAGGTACCGCCGCGTCATCACCGTCCATCAGATCTCTCCAGAGGAAATGCACAGG
ATCTGGAATGACATGTCAAGCAAGAAGCATCTCAGATGTTAGTACTTTTATCATTGTAAATAAC
TTTCTTTTCTAAGAAATGGGGACTAAGACGTTGGTATTGACAGGTGCCACCAAGGGAGCACGAA
CTGGTAAGGGGTTTTGTAAAGGTTTTGCTTCCTGTTCCTAGTCTTTAATCGGATCAGTACTTTG
CAAGAATTGGGCTCGGCCATAGAAATGGTGAGTGAGTTCGTGAAGGGCCAGGTTTCATTCTTAG
GTCCTAAGAAAGAGTGACCCTGAATAACTGCCAGATTAGCGCACCGTGCATCTGAGAAAAAAGA
TCTGGGCCAGGAGATAGAAACTCACAGTAATGTCTTCATACCACCTCTGCAAATGTAAATAGTG
ATTCTTTCTTAGAAATCACAACAAGTCGGGAAAGATACGCAGTCAGGAGCACACACTAGATGAG
GTAATCAATGCTTTGCGCTGCTGTCACATGGCATTCCTACATAAGTCGCCATGGAATGTGTGCA
GAATTTGAGATCCTACCAATAACTGATTTTTTTCCCTGGGGTAGGGAGGCTAGGATGAAATAAA
TGGGGATGTAAACTTGAGAATCAATTATCCCGTGTGGATAGAAAACACCTCGGCATGGACTTAC
AAGGATTGAATCTGGTCAGCAGGTGGGTTGTACATAAAATGCTACTTTAAGTAAACAAATAACC
CCCCCATAACAGATATTACATGGTGCCACCAAGGAGAAGGCTAAATGTGGACCTCTCATCTGCA
TCCTTCCATATACTGCCTTTAAGTGCATGGTATGGTTTTGGATCAGGCAGGTCTGTGTCTCCAT
GTATAGAAAACAGGTTGGTAGGAGGCCCAGAAATAATACATAACAACTGATGAAATGCCAATTT
AGGTATCCATTCTAATGAGCATAAGGTTGACAGTAGTATACAAGGCCCTCTCTCACATGTTTGC
AAAGCACATGAGAAAATCTTTAATGAGTTACCAGTATTATTAAAAGACATGCCCCAGCTACCAA
TAGAAGAAATGCTCTCAACGTCAAAAACGTTCATCTATGTTTAGCAGCAAAAAAAAAATCTTTT
TGATGTTCTGGAGATTCTGTGGCTGAGATCTGTGGTAAGGAAGAATAGGGAAGCCGAGTTCAGA
TCCCATTGATGCCACAAATGTATGTGGCTCACATGAGCAGGGGTCTCATTTTTGATGTGCTTCT
GTCTGCTCACTTGTGAAACAGCTAAAAAGAAAAATCTACCTCACAGGTACTGTGAGAGCAAATC
ACATTTGCTAATAAGTATTTTGAGATCTTTAGTTTAAAAGGTGCTATGTAATTCCGTGTGTATC
ATGCACTATGCTAAATGCTAAAATGATTGCAGTCATTTTAAAGATGGTTATCCGTGATGGCAAC
ATCATCTTAATATAACAGTTTACCAAAATATTGACCGTGAACTATC

hide sequence

RefSeq Acc Id:

XM_017591942 ⟹ XP_017447431

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	72,661,410 - 73,234,447 (+)	NCBI
mRatBN7.2	3	52,253,451 - 52,826,508 (+)	NCBI
Rnor_6.0	3	53,699,409 - 54,269,612 (+)	NCBI

Sequence:

show sequence

AGCGCAACCCGGCTCCGGTGCTCCGGCTGCCGCCGCTGCTGCTCCGCTGGTGCAGCTGAGCGAG
CCCGCGCCGGCGCCACCGCCGCCTCCGCCGCCGTCCACCGCGCGCTGCCAGCACCGCGGGGCTT
GCAGGAGGCCGCCGGGAGGGGCGGGCGCGCGAGCGGAGCACGAGGAGGCGGAGGCGGGGGAGAA
GTGATGCTGGCGCCAGGGATCCGGGCAGCGGCAGCGGAGAATAAGCATCTTCGGGACCCCGGCT
GCAGCGTCCCCGTGGCCCGCGGGCCAGCCGAACGGCCAGAGACGGCGCGTCCCGCGGATCCTGT
GCACGTATTAAGTCGAGATAATTAACAGAGTGGAATCCATTCACCACATCATCTGACTAGATCT
GTTAGAACCACGTCAAGGATTGCTGAGTCCAGGAGTGGAGAAAGGTTTATGTGAGAAAAGAGAC
CCTACTGTCGGAAGAATGCAAGAGATTTCATCATAGAATTCACTCGGAAAAGCCATGTGGAGCG
ACTCCAGTTAAAGAAGCATGAAGACAAGTCTACTGGGGAAAGAAGAAATGGGTTTCCATGGACC
TATCGATGATAATCATCTCAGGATTCTGCAATTCGGCATTCAGTGGCTTCTGGAGTGAGCCTCT
CAGATCTCTACAGACCAATGGAGACGAAGCTGCATGTTCTGTAGCTGTAGTGAGAAGAAAGGCA
GCAAGCTTGGTCCAAAAGAGTTCTGAGGAAGATTTCTGAGGCTTGGAGCTTCCATCGGGTTTGG
AAGAAAGTAAAGTGAATTCCATGATGCCACAGCACAAATAAAGCCCATGGACACCCACCAAGCA
ATTCCTCTCTGGCAGAATTTTTAGATTGCCGAGTAATATGCTGCCTTCGCGAGGGGGCAAGAAA
CTAGTGCCCAAAAGACGTGTTCTTCAGTATTTGGATTAGACGCGTTCTGAAGAAAATGGCGTCA
AAGGTTTCCTGCCTGTATGTGTTGACCGTTGTGTGCTGGGCCAGCGCTCTCTGGTACTTAAGCA
TAACAAGACCTACTTCATCATACACTGGCTCAAAGCCATTCAGTCACCTAACAGTTGCCAGGAA
AAACTTCACGTTTGGCAACATAAGAACTCGACCTATAAACCCACATTCTTTTGAGTTTCTTATA
AATGAACCCAACAAATGTGAGAAAAACATTCCTTTTCTTGTGATCCTCATTAGCACCACCCACA
AGGAATTTGATGCCCGCCAGGCAATCCGGGAGACTTGGGGGGATGAGAACAACTTCAAAGGGAT
CAAGATAGCCACGCTTTTCCTCCTGGGCAAAAATGCTGATCCTGTTCTCAACCAGATGGTGGAG
CAAGAGAGCCAGATCTTCCATGACATCATCGTGGAGGACTTCATTGACTCCTACCACAACCTCA
CCCTCAAAACCTTAATGGGGATGAGATGGGTTGCCACCTTCTGCTCAAAAGCCAAGTATGTCAT
GAAAACAGACAGTGACATTTTTGTGAACATGGACAACCTTATTTATAAACTCCTGAAACCCTCT
ACCAAGCCGAGAAGAAGATATTTCACTGGTTACGTCATCAATGGCGGGCCAATCAGGGATGTCC
GCAGTAAGTGGTATATGCCTAGGGATTTGTACCCTGACAGCAACTACCCACCGTTCTGTTCGGG
GACTGGCTATATCTTTTCCGCTGATGTGGCAGAACTCATTTACAAGACCTCACTCCACACCAGG
CTGCTTCATCTTGAAGATGTGTATGTGGGACTGTGTCTTCGAAAGCTGGGCATACATCCTTTCC
AGAATAGTGGCTTCAATCACTGGAAAATGGCCTACAGTTTGTGTAGGTACCGCCGCGTCATCAC
CGTCCATCAGATCTCTCCAGAGGAAATGCACAGGATCTGGAATGACATGTCAAGCAAGAAGCAT
CTCAGATGTTAGTACTTTTATCATTGTAAATAACTTTCTTTTCTAAGAAATGGGGACTAAGACG
TTGGTATTGACAGGTGCCACCAAGGGAGCACGAACTGGTAAGGGGTTTTGTAAAGGTTTTGCTT
CCTGTTCCTAGTCTTTAATCGGATCAGTACTTTGCAAGAATTGGGCTCGGCCATAGAAATGGTG
AGTGAGTTCGTGAAGGGCCAGGTTTCATTCTTAGGTCCTAAGAAAGAGTGACCCTGAATAACTG
CCAGATTAGCGCACCGTGCATCTGAGAAAAAAGATCTGGGCCAGGAGATAGAAACTCACAGTAA
TGTCTTCATACCACCTCTGCAAATGTAAATAGTGATTCTTTCTTAGAAATCACAACAAGTCGGG
AAAGATACGCAGTCAGGAGCACACACTAGATGAGGTAATCAATGCTTTGCGCTGCTGTCACATG
GCATTCCTACATAAGTCGCCATGGAATGTGTGCAGAATTTGAGATCCTACCAATAACTGATTTT
TTTCCCTGGGGTAGGGAGGCTAGGATGAAATAAATGGGGATGTAAACTTGAGAATCAATTATCC
CGTGTGGATAGAAAACACCTCGGCATGGACTTACAAGGATTGAATCTGGTCAGCAGGTGGGTTG
TACATAAAATGCTACTTTAAGTAAACAAATAACCCCCCCATAACAGATATTACATGGTGCCACC
AAGGAGAAGGCTAAATGTGGACCTCTCATCTGCATCCTTCCATATACTGCCTTTAAGTGCATGG
TATGGTTTTGGATCAGGCAGGTCTGTGTCTCCATGTATAGAAAACAGGTTGGTAGGAGGCCCAG
AAATAATACATAACAACTGATGAAATGCCAATTTAGGTATCCATTCTAATGAGCATAAGGTTGA
CAGTAGTATACAAGGCCCTCTCTCACATGTTTGCAAAGCACATGAGAAAATCTTTAATGAGTTA
CCAGTATTATTAAAAGACATGCCCCAGCTACCAATAGAAGAAATGCTCTCAACGTCAAAAACGT
TCATCTATGTTTAGCAGCAAAAAAAAAATCTTTTTGATGTTCTGGAGATTCTGTGGCTGAGATC
TGTGGTAAGGAAGAATAGGGAAGCCGAGTTCAGATCCCATTGATGCCACAAATGTATGTGGCTC
ACATGAGCAGGGGTCTCATTTTTGATGTGCTTCTGTCTGCTCACTTGTGAAACAGCTAAAAAGA
AAAATCTACCTCACAGGTACTGTGAGAGCAAATCACATTTGCTAATAAGTATTTTGAGATCTTT
AGTTTAAAAGGTGCTATGTAATTCCGTGTGTATCACGCACTATGCTAAATGCTAAAATGATTGC
AGTCATTTTAAAGATGGTTATCCATGATGGCAACATCATCTTAATATAACAGTTTACCAAAATA
TTGACCGTGAACTATCAGTGTACCTAATTCTTGGAAGACTTGAGTCTCCTTGCCTGTAAGTTAG
TTGATTAGGGAAGCTTCTTCCTCCACCACACCATGGTCTCTCATTCTGGTGATGAATTTGTCAC
TTCAGTGCATTGCCTTGGCATCCCAGGATGTTTAAAGCAAAAAGAATCTGCTTTGCTTTGGGGA
GGAGCTTTGTACAGGTTTTGCCAAACACAAACATTTGCCCTGAATTCATAAACCTCGTTAGAAC
ACGTAGAGCTAATCTGCTCCCTGGGAAGATGAAAATCTTCAGCAAATCTCCACAGTCACACATT
TACCATCCATGCTCTACTCAGTGTTGGGATGAAAAGAAAGCCCCACCACTGAAAAGGGTTGTTC
GTTTGAGCTATTTTCTTTGCACATTGACCTTTGCGAAACCCCCATAGAAGCTGGTCGTGATGGG
GATACAAAGAATAAATGGAGTTCCGTAATCACATAATCCCTTGCTAGGAAACATTTGATATCTC
ATCACCCCCAAAGTACTAAATACTGTAGGACTTCCCATCCTTTAATAACGATGGTGTCAAGTGA
CCCGGGAAAAGCTGTAACAGGACAAGGGGAGTCACCCTCCCACCAGCTAGCCTCAAACCCCAAG
AGCTCTATGGCTGGGAAAGTCTCGCACTCTCATGCCTCATTGGCCCCCCAGCTGCACAGCTGAA
TGCAGTCTCTGTCTCCTGCTCTGGCCTCTATCCCATTCAGCCAAACCACTTTTCATGTCCAAAA
TCTCACACTATGATAACCATGTATGCACACCTATGAACTGCTTTATATGTATGTGCAAAATATG
CATAGAGCCCTAATCTTGGAAAGGAGCAAAAAAAAAAATCGGAAAATCATGTGTCTTAAAGACT
ATTTCTTAACATTTTTATGCTACATAGTACCCTTATGACAAACATGTAAATAGACACCCAAGAT
TACATGTATATATTTTAAAGGCGCTTTTCTTGTCACCTCAATTGTATGTACAGCTAGAATCTGC
TTGATAGGTTAACATTTTCCTCTGCATGGAACTTGATGAGGTAAGGCCATTTGTCCGGTATCTC
AATAGCCTTAAGCATGGTCGCTCTCTGTTTGTTTTTTTGGTTTTGGTTTTGGTTTTTGGTTTTT
GTTTTTTTTTTTTCTTTTTTGGATGTTCAAAAAAGAAATGTTTAGCTTATCAAGGAAAAGTTCT
AATTTTCTACTTTTGTTAATTCTATGACAAGAGAGTGGTCAGGTTATTGTCAAATATTAAGCCA
TTCTTAGCATTTGTTTAAGAAAACTATTTCATAATAATGGCAGTATTCTGGGCCTGGGGGTTTT
CGCTCAGTGGTAAACACTTCCCTAGCATGCAGAGGGCTCTGGGTCCGTCCTCAGCACTGCAATA
ATAAAGTTAAAATAACGGCAGCCCTCCTGTACCAGAAGTCACTCAAATAATGTTCTAAACACTG
TCTGGCTCCCCACTATTTCTCCGTTATGTACGGGATAACATCAGCACCTAATCTTAAAAGCTTC
TTCATGTATTTCATAGAGGGAAAAAAAAGAATCCTTTCTCTTTGGTGCCTCCTTTATGTGGCTC
TGTGTCCTCTTGGAGCAGTCAATACACAACGATGTACTTTTAAATAACCAGATTCAAAACACGA
AGACCATTTTTGATTGGAATTAAATACGGAAGAACAAAACCCCTTGTGTGATAAGATACGGAGG
GGAAACAAACTCTATACCGAGAAGTCGAGGAAGGAGTTTTTCAATCAAATTTCTTCTAACAAGA
GACCATGGGATATTTATGTGCAGTGTGTGGAATTCATTTTCTACCTTTCCTAATACGTGCGCTC
AAGGCGGGAACTGATCGTGTCATTTCTGTAAAGCGGAAGATACTTTTTATAAGCTACAGGTAAC
TGAGGAATGAAAGAAGTAATTCACTAGAGACGCTTGTTGATAATTGACCTTTAGGTATATTGTT
ATAAATGAATGATTGTATTTATGTATTTATTTGTTCGAAATTGTACATATGGTTTTGCCAAAAG
TAACTGTGTGTTGAAGTGCACTCTCTGGGTTTGTAGTGCTATTTAGGGTTACATGGGTTGCCAA
TCAAGCTGCTAATCAGAATACTATTTTTTTGTATCAGTGTTACAACATGTGACGAATAGATGAC
GCTGTCTTTCCATTCATTCTCTCTCCCTTCCTCTTGAAATGTAAACTGTTGGTTGAAAGCGCGA
TGCGGTTGGACAGGCCCATCTGTCAAGAGGAGGATCATGGTTTCATAAGACTGATTTTTTTAAA
CTCCTGAGACAAATAAACAAAAGAAGAACTCA

hide sequence

RefSeq Acc Id:

XM_017591945 ⟹ XP_017447434

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	72,661,410 - 73,234,447 (+)	NCBI
mRatBN7.2	3	52,253,451 - 52,826,508 (+)	NCBI
Rnor_6.0	3	53,699,409 - 54,269,612 (+)	NCBI

Sequence:

show sequence

AGCGCAACCCGGCTCCGGTGCTCCGGCTGCCGCCGCTGCTGCTCCGCTGGTGCAGCTGAGCGAG
CCCGCGCCGGCGCCACCGCCGCCTCCGCCGCCGTCCACCGCGCGCTGCCAGCACCGCGGGGCTT
GCAGGAGGCCGCCGGGAGGGGCGGGCGCGCGAGCGGAGCACGAGGAGGCGGAGGCGGGGGAGAA
GTGATGCTGGCGCCAGGGATCCGGGCAGCGGCAGCGGAGAATAAGCATCTTCGGGACCCCGGCT
GCAGCGTCCCCGTGGCCCGCGGGCCAGCCGAACGGCCAGAGACGGCGCGTCCCGCGGATCTGTT
AGAACCACGTCAAGGATTGCTGAGTCCAGGAGTGGAGAAAGGTTTATGTGAGAAAAGAGACCCT
ACTGTCGGAAGAATGCAAGAGATTTCATCATAGAATTCACTCGGAAAAGCCATGTGGAGCGACT
CCAGTTAAAGAAGCATGAAGACAAGTCTACTGGGGAAAGAAGAAATGGGTTTCCATGGACCTAT
CGATGATAATCATCTCAGGATTCTGCAATTCGGCATTCAGTGGCTTCTGGAGTGAGCCTCTCAG
ATCTCTACAGACCAATGGAGACGAAGCTGCATGTTCTGTAGCTGTAGTGAGAAGAAAGGCAGCA
AGCTTGGTCCAAAAGAGTTCTGAGGAAGATTTCTGAGGCTTGGAGCTTCCATCGGGTTTGGAAG
AAAGTAAAGTGAATTCCATGATGCCACAGCACAAATAAAGCCCATGGACACCCACCAAGCAATT
CCTCTCTGGCAGAATTTTTAGATTGCCGAGTAATATGCTGCCTTCGCGAGGGGGCAAGAAACTA
GTGCCCAAAAGACGTGTTCTTCAGTATTTGGATTAGACGCGTTCTGAAGAAAATGGCGTCAAAG
GTTTCCTGCCTGTATGTGTTGACCGTTGTGTGCTGGGCCAGCGCTCTCTGGTACTTAAGCATAA
CAAGACCTACTTCATCATACACTGGCTCAAAGCCATTCAGTCACCTAACAGTTGCCAGGAAAAA
CTTCACGTTTGGCAACATAAGAACTCGACCTATAAACCCACATTCTTTTGAGTTTCTTATAAAT
GAACCCAACAAATGTGAGAAAAACATTCCTTTTCTTGTGATCCTCATTAGCACCACCCACAAGG
AATTTGATGCCCGCCAGGCAATCCGGGAGACTTGGGGGGATGAGAACAACTTCAAAGGGATCAA
GATAGCCACGCTTTTCCTCCTGGGCAAAAATGCTGATCCTGTTCTCAACCAGATGGTGGAGCAA
GAGAGCCAGATCTTCCATGACATCATCGTGGAGGACTTCATTGACTCCTACCACAACCTCACCC
TCAAAACCTTAATGGGGATGAGATGGGTTGCCACCTTCTGCTCAAAAGCCAAGTATGTCATGAA
AACAGACAGTGACATTTTTGTGAACATGGACAACCTTATTTATAAACTCCTGAAACCCTCTACC
AAGCCGAGAAGAAGATATTTCACTGGTTACGTCATCAATGGCGGGCCAATCAGGGATGTCCGCA
GTAAGTGGTATATGCCTAGGGATTTGTACCCTGACAGCAACTACCCACCGTTCTGTTCGGGGAC
TGGCTATATCTTTTCCGCTGATGTGGCAGAACTCATTTACAAGACCTCACTCCACACCAGGCTG
CTTCATCTTGAAGATGTGTATGTGGGACTGTGTCTTCGAAAGCTGGGCATACATCCTTTCCAGA
ATAGTGGCTTCAATCACTGGAAAATGGCCTACAGTTTGTGTAGGTACCGCCGCGTCATCACCGT
CCATCAGATCTCTCCAGAGGAAATGCACAGGATCTGGAATGACATGTCAAGCAAGAAGCATCTC
AGATGTTAGTACTTTTATCATTGTAAATAACTTTCTTTTCTAAGAAATGGGGACTAAGACGTTG
GTATTGACAGGTGCCACCAAGGGAGCACGAACTGGTAAGGGGTTTTGTAAAGGTTTTGCTTCCT
GTTCCTAGTCTTTAATCGGATCAGTACTTTGCAAGAATTGGGCTCGGCCATAGAAATGGTGAGT
GAGTTCGTGAAGGGCCAGGTTTCATTCTTAGGTCCTAAGAAAGAGTGACCCTGAATAACTGCCA
GATTAGCGCACCGTGCATCTGAGAAAAAAGATCTGGGCCAGGAGATAGAAACTCACAGTAATGT
CTTCATACCACCTCTGCAAATGTAAATAGTGATTCTTTCTTAGAAATCACAACAAGTCGGGAAA
GATACGCAGTCAGGAGCACACACTAGATGAGGTAATCAATGCTTTGCGCTGCTGTCACATGGCA
TTCCTACATAAGTCGCCATGGAATGTGTGCAGAATTTGAGATCCTACCAATAACTGATTTTTTT
CCCTGGGGTAGGGAGGCTAGGATGAAATAAATGGGGATGTAAACTTGAGAATCAATTATCCCGT
GTGGATAGAAAACACCTCGGCATGGACTTACAAGGATTGAATCTGGTCAGCAGGTGGGTTGTAC
ATAAAATGCTACTTTAAGTAAACAAATAACCCCCCCATAACAGATATTACATGGTGCCACCAAG
GAGAAGGCTAAATGTGGACCTCTCATCTGCATCCTTCCATATACTGCCTTTAAGTGCATGGTAT
GGTTTTGGATCAGGCAGGTCTGTGTCTCCATGTATAGAAAACAGGTTGGTAGGAGGCCCAGAAA
TAATACATAACAACTGATGAAATGCCAATTTAGGTATCCATTCTAATGAGCATAAGGTTGACAG
TAGTATACAAGGCCCTCTCTCACATGTTTGCAAAGCACATGAGAAAATCTTTAATGAGTTACCA
GTATTATTAAAAGACATGCCCCAGCTACCAATAGAAGAAATGCTCTCAACGTCAAAAACGTTCA
TCTATGTTTAGCAGCAAAAAAAAAATCTTTTTGATGTTCTGGAGATTCTGTGGCTGAGATCTGT
GGTAAGGAAGAATAGGGAAGCCGAGTTCAGATCCCATTGATGCCACAAATGTATGTGGCTCACA
TGAGCAGGGGTCTCATTTTTGATGTGCTTCTGTCTGCTCACTTGTGAAACAGCTAAAAAGAAAA
ATCTACCTCACAGGTACTGTGAGAGCAAATCACATTTGCTAATAAGTATTTTGAGATCTTTAGT
TTAAAAGGTGCTATGTAATTCCGTGTGTATCACGCACTATGCTAAATGCTAAAATGATTGCAGT
CATTTTAAAGATGGTTATCCATGATGGCAACATCATCTTAATATAACAGTTTACCAAAATATTG
ACCGTGAACTATCAGTGTACCTAATTCTTGGAAGACTTGAGTCTCCTTGCCTGTAAGTTAGTTG
ATTAGGGAAGCTTCTTCCTCCACCACACCATGGTCTCTCATTCTGGTGATGAATTTGTCACTTC
AGTGCATTGCCTTGGCATCCCAGGATGTTTAAAGCAAAAAGAATCTGCTTTGCTTTGGGGAGGA
GCTTTGTACAGGTTTTGCCAAACACAAACATTTGCCCTGAATTCATAAACCTCGTTAGAACACG
TAGAGCTAATCTGCTCCCTGGGAAGATGAAAATCTTCAGCAAATCTCCACAGTCACACATTTAC
CATCCATGCTCTACTCAGTGTTGGGATGAAAAGAAAGCCCCACCACTGAAAAGGGTTGTTCGTT
TGAGCTATTTTCTTTGCACATTGACCTTTGCGAAACCCCCATAGAAGCTGGTCGTGATGGGGAT
ACAAAGAATAAATGGAGTTCCGTAATCACATAATCCCTTGCTAGGAAACATTTGATATCTCATC
ACCCCCAAAGTACTAAATACTGTAGGACTTCCCATCCTTTAATAACGATGGTGTCAAGTGACCC
GGGAAAAGCTGTAACAGGACAAGGGGAGTCACCCTCCCACCAGCTAGCCTCAAACCCCAAGAGC
TCTATGGCTGGGAAAGTCTCGCACTCTCATGCCTCATTGGCCCCCCAGCTGCACAGCTGAATGC
AGTCTCTGTCTCCTGCTCTGGCCTCTATCCCATTCAGCCAAACCACTTTTCATGTCCAAAATCT
CACACTATGATAACCATGTATGCACACCTATGAACTGCTTTATATGTATGTGCAAAATATGCAT
AGAGCCCTAATCTTGGAAAGGAGCAAAAAAAAAAATCGGAAAATCATGTGTCTTAAAGACTATT
TCTTAACATTTTTATGCTACATAGTACCCTTATGACAAACATGTAAATAGACACCCAAGATTAC
ATGTATATATTTTAAAGGCGCTTTTCTTGTCACCTCAATTGTATGTACAGCTAGAATCTGCTTG
ATAGGTTAACATTTTCCTCTGCATGGAACTTGATGAGGTAAGGCCATTTGTCCGGTATCTCAAT
AGCCTTAAGCATGGTCGCTCTCTGTTTGTTTTTTTGGTTTTGGTTTTGGTTTTTGGTTTTTGTT
TTTTTTTTTTCTTTTTTGGATGTTCAAAAAAGAAATGTTTAGCTTATCAAGGAAAAGTTCTAAT
TTTCTACTTTTGTTAATTCTATGACAAGAGAGTGGTCAGGTTATTGTCAAATATTAAGCCATTC
TTAGCATTTGTTTAAGAAAACTATTTCATAATAATGGCAGTATTCTGGGCCTGGGGGTTTTCGC
TCAGTGGTAAACACTTCCCTAGCATGCAGAGGGCTCTGGGTCCGTCCTCAGCACTGCAATAATA
AAGTTAAAATAACGGCAGCCCTCCTGTACCAGAAGTCACTCAAATAATGTTCTAAACACTGTCT
GGCTCCCCACTATTTCTCCGTTATGTACGGGATAACATCAGCACCTAATCTTAAAAGCTTCTTC
ATGTATTTCATAGAGGGAAAAAAAAGAATCCTTTCTCTTTGGTGCCTCCTTTATGTGGCTCTGT
GTCCTCTTGGAGCAGTCAATACACAACGATGTACTTTTAAATAACCAGATTCAAAACACGAAGA
CCATTTTTGATTGGAATTAAATACGGAAGAACAAAACCCCTTGTGTGATAAGATACGGAGGGGA
AACAAACTCTATACCGAGAAGTCGAGGAAGGAGTTTTTCAATCAAATTTCTTCTAACAAGAGAC
CATGGGATATTTATGTGCAGTGTGTGGAATTCATTTTCTACCTTTCCTAATACGTGCGCTCAAG
GCGGGAACTGATCGTGTCATTTCTGTAAAGCGGAAGATACTTTTTATAAGCTACAGGTAACTGA
GGAATGAAAGAAGTAATTCACTAGAGACGCTTGTTGATAATTGACCTTTAGGTATATTGTTATA
AATGAATGATTGTATTTATGTATTTATTTGTTCGAAATTGTACATATGGTTTTGCCAAAAGTAA
CTGTGTGTTGAAGTGCACTCTCTGGGTTTGTAGTGCTATTTAGGGTTACATGGGTTGCCAATCA
AGCTGCTAATCAGAATACTATTTTTTTGTATCAGTGTTACAACATGTGACGAATAGATGACGCT
GTCTTTCCATTCATTCTCTCTCCCTTCCTCTTGAAATGTAAACTGTTGGTTGAAAGCGCGATGC
GGTTGGACAGGCCCATCTGTCAAGAGGAGGATCATGGTTTCATAAGACTGATTTTTTTAAACTC
CTGAGACAAATAAACAAAAGAAGAACTCA

hide sequence

RefSeq Acc Id:

XM_017591946 ⟹ XP_017447435

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	73,078,015 - 73,234,447 (+)	NCBI
mRatBN7.2	3	52,670,108 - 52,826,508 (+)	NCBI
Rnor_6.0	3	54,114,094 - 54,269,612 (+)	NCBI

Sequence:

show sequence

CCAAACATATTCAAACTACCATAGTCTCTTCGTGGAAAGATTAGCAACGGGTAATTTATGTTTA
AGGTCCATGGTGAAGAAAACAACATGAGATTAAATCAAGTACAAGAGAAGATGAAGCGATCAGG
AAACAGAATATTGATGAAGTATCTGAGGCTGCTGCAGGATGGCTGAGCACAGTGCTTAGCAGCT
CGGTCTGTTTCTAAGTAGGAGGATCTTACTATAGACTGATAAAATATTATAAAATCCTACATAA
ACCAATGAATCATTTATGTAGGTGATTCTGTGTCCCATGCATACCTTTATACTGTCATATCATG
AGGTGTTAGGAATTTCTTCGTTCCATTTTCATTTATGGAATCACCGTTGGGCATGTGATTTGTT
AGTGTCTGAGCCACAAATTCTGCAGGAGAACATGACTGCATTTCTCAACCTTTATCCTGACTAA
GTCATGCACTTCTGCCTTGTTATTTCCCCTTGTTCTCTTGGCTTGCACTTAGGAGTCTGTGTTA
CTATGAGGAAGTACAAATAGGCCATGTAAAGAAGTATGGAAAGGGAGTACATTTCTGAGCCTAC
AAACCACCACAGCTCCTAGCTGATCTTCCACTGGGTACATAGTACACACCTCTCAGTCATGGGA
CTAATCCCTCTTGAAACGAGACTCTCCATGCCCCCAAGGAAACATCTAAGGGAATGTTACATGG
AACTGAGACAAAGGGCTCTCTGTTCCACCTTGCCAGATTCCAGATTCACAAAGGAGACAGAGAT
TTTCGATGTTCAGACCACTACATTTTGAGGTGGTTTAATATGCATTGGTAGGTAAGGGATACAT
ACAAACTTTCACTTCCATTAGTGGTCACACGTTTTACAGTTTCATTGTACTGAAGTTTACAAGC
CTAGCATGAGTCTCACTGGGCTAAAATGATGATGAATTCCTTTCTGCAGTGTGTGTCAGGGTAC
TCAGTTTCTGGCCTTTGCTGTCTTCTAGAGAGAGGCAGCAGACATTGCTTGACTTGTGGTGCCT
TTGAAAACCAGGAAGATGGCATGGGGCTCTTCCTATACATCGCTCAGTACCTCTTCTGGAGCTT
CCCCACTTTGCTACTTAATCTCCCTCCTTCATGTACAAGAGGGAACATGGAAAGCCACGTGCTT
AACGGCATGAACCTGCCATAACATTTCATCTCCCAAGACATAGAACCTAAACTTAACTACAGAT
CCTGGAGTTCAGGATATGGACGTGTCTGCAGAAACAGCATTCTGCCACAACTAGAACCAATTAT
GTCTGTGTTATAGTTGTTGCAAGGTAAGATTAAAATTGGTCGATGATCTGTAGAGATTCTTCTG
ATCCCCCGAACTTTCCGTGAACATTGTACAACGGTCAGGTGTAAAGTGGATATTTTTCATTTTC
TGTAGGCGTTTCAGGAATTACTTTTGGGGACAGGATAGCTCCCTTTGGGCTCAGACTCTATTTT
TGCACTGTCACATCTTCAGAATTTGTTACATTGATGAATTTTCTCACCATCCCACACTCTGTCC
CTGCTCTACACTACACCTCACTAAGACGTAACTGCTTCCTTTCCCTCCCTTGCTACATTGTAGC
TAATGCAGTCAAACCAAATACAATAAAAGACACAGCCCACAGCCACAGTTTATGAAATTAGTGA
GGAGACAGAAGGAATACACCTCACAAGAACAACACAAAGTCGCCCGCCCTCGGCCGCTCTGGTG
GATGACAGTTCTGCTAACTCAGGTAAGCCTCTCCCCTCACCACCCGTGGCTCCAGAGAGAGTGA
GGTATGCCATTAGTGCTTATAGAATGGGGCAGTGCCTTGTATCCAGCTTAGCTACAGCCCCAGC
CCTGCAAACAGAATGCTCATTGCTGCCCTTGTTTTGCATGCTTCCCTCCCTCACCAGGATTTAT
CCCCACACCAGTCTGAAAAATACCACCACCTTCCTCTATCCTCCAGTGAAGGTAGAAAAGGTAG
TTTCCTCTTCAGTTATATGAACATAAAGAAAATTATTTATCTAACTGTGATTTTGGAGAATCTT
GTAAATTCAAGGGCCTGAGACATTGGGAGAACTTTTTCTTATATTACCATTTTTTTTTACTTCT
GCCACTGCCCCACCCCCATCTCCTCCTTTTTTTGATTTTTGAACCAGTAGCCAAAACCAGACTC
CTAATCAAAAGGGCAAAGGGCAAAGTACCTGATAATGTGTGCTTAGTACACCCAAGCTAGAAGC
TGGCCTCGTGTTGCCAAAGGCAGGGAGAATAGCAAACCAGGTGCCATCCAGAGTCGAAGAGAAA
GCGTCAGCCTTTCCAAGGAAAATTAAAAACGAATACCAGATTACAACATTCTGAGTTCTGCTCC
CCGTGGACTTCGGTTGAATTCTGGATGAGGAAAGAAGAAATGGGTTTCCATGGACCTATCGATG
ATAATCATCTCAGGATTCTGCAATTCGGCATTCAGTGGCTTCTGGAGTGAGCCTCTCAGATCTC
TACAGACCAATGGAGACGAAGCTGCATGTTCTGTAGCTGTAGTGAGAAGAAAGGCAGCAAGCTT
GGTCCAAAAGAGTTCTGAGGAAGATTTCTGAGGCTTGGAGCTTCCATCGGGTTTGGAAGAAAGT
AAAGTGAATTCCATGATGCCACAGCACAAATAAAGCCCATGGACACCCACCAAGCAATTCCTCT
CTGGCAGAATTTTTAGATTGCCGAGTAATATGCTGCCTTCGCGAGGGGGCAAGAAACTAGTGCC
CAAAAGACGTGTTCTTCAGTATTTGGATTAGACGCGTTCTGAAGAAAATGGCGTCAAAGGTTTC
CTGCCTGTATGTGTTGACCGTTGTGTGCTGGGCCAGCGCTCTCTGGTACTTAAGCATAACAAGA
CCTACTTCATCATACACTGGCTCAAAGCCATTCAGTCACCTAACAGTTGCCAGGAAAAACTTCA
CGTTTGGCAACATAAGAACTCGACCTATAAACCCACATTCTTTTGAGTTTCTTATAAATGAACC
CAACAAATGTGAGAAAAACATTCCTTTTCTTGTGATCCTCATTAGCACCACCCACAAGGAATTT
GATGCCCGCCAGGCAATCCGGGAGACTTGGGGGGATGAGAACAACTTCAAAGGGATCAAGATAG
CCACGCTTTTCCTCCTGGGCAAAAATGCTGATCCTGTTCTCAACCAGATGGTGGAGCAAGAGAG
CCAGATCTTCCATGACATCATCGTGGAGGACTTCATTGACTCCTACCACAACCTCACCCTCAAA
ACCTTAATGGGGATGAGATGGGTTGCCACCTTCTGCTCAAAAGCCAAGTATGTCATGAAAACAG
ACAGTGACATTTTTGTGAACATGGACAACCTTATTTATAAACTCCTGAAACCCTCTACCAAGCC
GAGAAGAAGATATTTCACTGGTTACGTCATCAATGGCGGGCCAATCAGGGATGTCCGCAGTAAG
TGGTATATGCCTAGGGATTTGTACCCTGACAGCAACTACCCACCGTTCTGTTCGGGGACTGGCT
ATATCTTTTCCGCTGATGTGGCAGAACTCATTTACAAGACCTCACTCCACACCAGGCTGCTTCA
TCTTGAAGATGTGTATGTGGGACTGTGTCTTCGAAAGCTGGGCATACATCCTTTCCAGAATAGT
GGCTTCAATCACTGGAAAATGGCCTACAGTTTGTGTAGGTACCGCCGCGTCATCACCGTCCATC
AGATCTCTCCAGAGGAAATGCACAGGATCTGGAATGACATGTCAAGCAAGAAGCATCTCAGATG
TTAGTACTTTTATCATTGTAAATAACTTTCTTTTCTAAGAAATGGGGACTAAGACGTTGGTATT
GACAGGTGCCACCAAGGGAGCACGAACTGGTAAGGGGTTTTGTAAAGGTTTTGCTTCCTGTTCC
TAGTCTTTAATCGGATCAGTACTTTGCAAGAATTGGGCTCGGCCATAGAAATGGTGAGTGAGTT
CGTGAAGGGCCAGGTTTCATTCTTAGGTCCTAAGAAAGAGTGACCCTGAATAACTGCCAGATTA
GCGCACCGTGCATCTGAGAAAAAAGATCTGGGCCAGGAGATAGAAACTCACAGTAATGTCTTCA
TACCACCTCTGCAAATGTAAATAGTGATTCTTTCTTAGAAATCACAACAAGTCGGGAAAGATAC
GCAGTCAGGAGCACACACTAGATGAGGTAATCAATGCTTTGCGCTGCTGTCACATGGCATTCCT
ACATAAGTCGCCATGGAATGTGTGCAGAATTTGAGATCCTACCAATAACTGATTTTTTTCCCTG
GGGTAGGGAGGCTAGGATGAAATAAATGGGGATGTAAACTTGAGAATCAATTATCCCGTGTGGA
TAGAAAACACCTCGGCATGGACTTACAAGGATTGAATCTGGTCAGCAGGTGGGTTGTACATAAA
ATGCTACTTTAAGTAAACAAATAACCCCCCCATAACAGATATTACATGGTGCCACCAAGGAGAA
GGCTAAATGTGGACCTCTCATCTGCATCCTTCCATATACTGCCTTTAAGTGCATGGTATGGTTT
TGGATCAGGCAGGTCTGTGTCTCCATGTATAGAAAACAGGTTGGTAGGAGGCCCAGAAATAATA
CATAACAACTGATGAAATGCCAATTTAGGTATCCATTCTAATGAGCATAAGGTTGACAGTAGTA
TACAAGGCCCTCTCTCACATGTTTGCAAAGCACATGAGAAAATCTTTAATGAGTTACCAGTATT
ATTAAAAGACATGCCCCAGCTACCAATAGAAGAAATGCTCTCAACGTCAAAAACGTTCATCTAT
GTTTAGCAGCAAAAAAAAAATCTTTTTGATGTTCTGGAGATTCTGTGGCTGAGATCTGTGGTAA
GGAAGAATAGGGAAGCCGAGTTCAGATCCCATTGATGCCACAAATGTATGTGGCTCACATGAGC
AGGGGTCTCATTTTTGATGTGCTTCTGTCTGCTCACTTGTGAAACAGCTAAAAAGAAAAATCTA
CCTCACAGGTACTGTGAGAGCAAATCACATTTGCTAATAAGTATTTTGAGATCTTTAGTTTAAA
AGGTGCTATGTAATTCCGTGTGTATCACGCACTATGCTAAATGCTAAAATGATTGCAGTCATTT
TAAAGATGGTTATCCATGATGGCAACATCATCTTAATATAACAGTTTACCAAAATATTGACCGT
GAACTATCAGTGTACCTAATTCTTGGAAGACTTGAGTCTCCTTGCCTGTAAGTTAGTTGATTAG
GGAAGCTTCTTCCTCCACCACACCATGGTCTCTCATTCTGGTGATGAATTTGTCACTTCAGTGC
ATTGCCTTGGCATCCCAGGATGTTTAAAGCAAAAAGAATCTGCTTTGCTTTGGGGAGGAGCTTT
GTACAGGTTTTGCCAAACACAAACATTTGCCCTGAATTCATAAACCTCGTTAGAACACGTAGAG
CTAATCTGCTCCCTGGGAAGATGAAAATCTTCAGCAAATCTCCACAGTCACACATTTACCATCC
ATGCTCTACTCAGTGTTGGGATGAAAAGAAAGCCCCACCACTGAAAAGGGTTGTTCGTTTGAGC
TATTTTCTTTGCACATTGACCTTTGCGAAACCCCCATAGAAGCTGGTCGTGATGGGGATACAAA
GAATAAATGGAGTTCCGTAATCACATAATCCCTTGCTAGGAAACATTTGATATCTCATCACCCC
CAAAGTACTAAATACTGTAGGACTTCCCATCCTTTAATAACGATGGTGTCAAGTGACCCGGGAA
AAGCTGTAACAGGACAAGGGGAGTCACCCTCCCACCAGCTAGCCTCAAACCCCAAGAGCTCTAT
GGCTGGGAAAGTCTCGCACTCTCATGCCTCATTGGCCCCCCAGCTGCACAGCTGAATGCAGTCT
CTGTCTCCTGCTCTGGCCTCTATCCCATTCAGCCAAACCACTTTTCATGTCCAAAATCTCACAC
TATGATAACCATGTATGCACACCTATGAACTGCTTTATATGTATGTGCAAAATATGCATAGAGC
CCTAATCTTGGAAAGGAGCAAAAAAAAAAATCGGAAAATCATGTGTCTTAAAGACTATTTCTTA
ACATTTTTATGCTACATAGTACCCTTATGACAAACATGTAAATAGACACCCAAGATTACATGTA
TATATTTTAAAGGCGCTTTTCTTGTCACCTCAATTGTATGTACAGCTAGAATCTGCTTGATAGG
TTAACATTTTCCTCTGCATGGAACTTGATGAGGTAAGGCCATTTGTCCGGTATCTCAATAGCCT
TAAGCATGGTCGCTCTCTGTTTGTTTTTTTGGTTTTGGTTTTGGTTTTTGGTTTTTGTTTTTTT
TTTTTCTTTTTTGGATGTTCAAAAAAGAAATGTTTAGCTTATCAAGGAAAAGTTCTAATTTTCT
ACTTTTGTTAATTCTATGACAAGAGAGTGGTCAGGTTATTGTCAAATATTAAGCCATTCTTAGC
ATTTGTTTAAGAAAACTATTTCATAATAATGGCAGTATTCTGGGCCTGGGGGTTTTCGCTCAGT
GGTAAACACTTCCCTAGCATGCAGAGGGCTCTGGGTCCGTCCTCAGCACTGCAATAATAAAGTT
AAAATAACGGCAGCCCTCCTGTACCAGAAGTCACTCAAATAATGTTCTAAACACTGTCTGGCTC
CCCACTATTTCTCCGTTATGTACGGGATAACATCAGCACCTAATCTTAAAAGCTTCTTCATGTA
TTTCATAGAGGGAAAAAAAAGAATCCTTTCTCTTTGGTGCCTCCTTTATGTGGCTCTGTGTCCT
CTTGGAGCAGTCAATACACAACGATGTACTTTTAAATAACCAGATTCAAAACACGAAGACCATT
TTTGATTGGAATTAAATACGGAAGAACAAAACCCCTTGTGTGATAAGATACGGAGGGGAAACAA
ACTCTATACCGAGAAGTCGAGGAAGGAGTTTTTCAATCAAATTTCTTCTAACAAGAGACCATGG
GATATTTATGTGCAGTGTGTGGAATTCATTTTCTACCTTTCCTAATACGTGCGCTCAAGGCGGG
AACTGATCGTGTCATTTCTGTAAAGCGGAAGATACTTTTTATAAGCTACAGGTAACTGAGGAAT
GAAAGAAGTAATTCACTAGAGACGCTTGTTGATAATTGACCTTTAGGTATATTGTTATAAATGA
ATGATTGTATTTATGTATTTATTTGTTCGAAATTGTACATATGGTTTTGCCAAAAGTAACTGTG
TGTTGAAGTGCACTCTCTGGGTTTGTAGTGCTATTTAGGGTTACATGGGTTGCCAATCAAGCTG
CTAATCAGAATACTATTTTTTTGTATCAGTGTTACAACATGTGACGAATAGATGACGCTGTCTT
TCCATTCATTCTCTCTCCCTTCCTCTTGAAATGTAAACTGTTGGTTGAAAGCGCGATGCGGTTG
GACAGGCCCATCTGTCAAGAGGAGGATCATGGTTTCATAAGACTGATTTTTTTAAACTCCTGAG
ACAAATAAACAAAAGAAGAACTCA

hide sequence

RefSeq Acc Id:

XM_017591948 ⟹ XP_017447437

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	73,171,687 - 73,234,447 (+)	NCBI
mRatBN7.2	3	52,764,508 - 52,826,508 (+)	NCBI
Rnor_6.0	3	54,208,704 - 54,269,612 (+)	NCBI

Sequence:

show sequence

TTGCACTTGGGCATAGATTTCAAAGTTGAGAGTTCTTCTTGGTGGATTTTAACATTGATGAGTA
TGTTTTTTGAAACTTTTTGTTGAAAGTCTATTTTATTGGATATTAGAAAGGATACTCCAGTTTT
TTCCTTGGGACCATTTAAAAATTTTTCCAGCCTTTTACTCTGAGGAAGTGTCTGTCACTGAGGA
TTCTGCAATTCGGCATTCAGTGGCTTCTGGAGTGAGCCTCTCAGATCTCTACAGACCAATGGAG
ACGAAGCTGCATGTTCTGTAGCTGTAGTGAGAAGAAAGGCAGCAAGCTTGGTCCAAAAGAGTTC
TGAGGAAGATTTCTGAGGCTTGGAGCTTCCATCGGGTTTGGAAGAAAGTAAAGTGAATTCCATG
ATGCCACAGCACAAATAAAGCCCATGGACACCCACCAAGCAATTCCTCTCTGGCAGAATTTTTA
GATTGCCGAGTAATATGCTGCCTTCGCGAGGGGGCAAGAAACTAGTGCCCAAAAGACGTGTTCT
TCAGTATTTGGATTAGACGCGTTCTGAAGAAAATGGCGTCAAAGGTTTCCTGCCTGTATGTGTT
GACCGTTGTGTGCTGGGCCAGCGCTCTCTGGTACTTAAGCATAACAAGACCTACTTCATCATAC
ACTGGCTCAAAGCCATTCAGTCACCTAACAGTTGCCAGGAAAAACTTCACGTTTGGCAACATAA
GAACTCGACCTATAAACCCACATTCTTTTGAGTTTCTTATAAATGAACCCAACAAATGTGAGAA
AAACATTCCTTTTCTTGTGATCCTCATTAGCACCACCCACAAGGAATTTGATGCCCGCCAGGCA
ATCCGGGAGACTTGGGGGGATGAGAACAACTTCAAAGGGATCAAGATAGCCACGCTTTTCCTCC
TGGGCAAAAATGCTGATCCTGTTCTCAACCAGATGGTGGAGCAAGAGAGCCAGATCTTCCATGA
CATCATCGTGGAGGACTTCATTGACTCCTACCACAACCTCACCCTCAAAACCTTAATGGGGATG
AGATGGGTTGCCACCTTCTGCTCAAAAGCCAAGTATGTCATGAAAACAGACAGTGACATTTTTG
TGAACATGGACAACCTTATTTATAAACTCCTGAAACCCTCTACCAAGCCGAGAAGAAGATATTT
CACTGGTTACGTCATCAATGGCGGGCCAATCAGGGATGTCCGCAGTAAGTGGTATATGCCTAGG
GATTTGTACCCTGACAGCAACTACCCACCGTTCTGTTCGGGGACTGGCTATATCTTTTCCGCTG
ATGTGGCAGAACTCATTTACAAGACCTCACTCCACACCAGGCTGCTTCATCTTGAAGATGTGTA
TGTGGGACTGTGTCTTCGAAAGCTGGGCATACATCCTTTCCAGAATAGTGGCTTCAATCACTGG
AAAATGGCCTACAGTTTGTGTAGGTACCGCCGCGTCATCACCGTCCATCAGATCTCTCCAGAGG
AAATGCACAGGATCTGGAATGACATGTCAAGCAAGAAGCATCTCAGATGTTAGTACTTTTATCA
TTGTAAATAACTTTCTTTTCTAAGAAATGGGGACTAAGACGTTGGTATTGACAGGTGCCACCAA
GGGAGCACGAACTGGTAAGGGGTTTTGTAAAGGTTTTGCTTCCTGTTCCTAGTCTTTAATCGGA
TCAGTACTTTGCAAGAATTGGGCTCGGCCATAGAAATGGTGAGTGAGTTCGTGAAGGGCCAGGT
TTCATTCTTAGGTCCTAAGAAAGAGTGACCCTGAATAACTGCCAGATTAGCGCACCGTGCATCT
GAGAAAAAAGATCTGGGCCAGGAGATAGAAACTCACAGTAATGTCTTCATACCACCTCTGCAAA
TGTAAATAGTGATTCTTTCTTAGAAATCACAACAAGTCGGGAAAGATACGCAGTCAGGAGCACA
CACTAGATGAGGTAATCAATGCTTTGCGCTGCTGTCACATGGCATTCCTACATAAGTCGCCATG
GAATGTGTGCAGAATTTGAGATCCTACCAATAACTGATTTTTTTCCCTGGGGTAGGGAGGCTAG
GATGAAATAAATGGGGATGTAAACTTGAGAATCAATTATCCCGTGTGGATAGAAAACACCTCGG
CATGGACTTACAAGGATTGAATCTGGTCAGCAGGTGGGTTGTACATAAAATGCTACTTTAAGTA
AACAAATAACCCCCCCATAACAGATATTACATGGTGCCACCAAGGAGAAGGCTAAATGTGGACC
TCTCATCTGCATCCTTCCATATACTGCCTTTAAGTGCATGGTATGGTTTTGGATCAGGCAGGTC
TGTGTCTCCATGTATAGAAAACAGGTTGGTAGGAGGCCCAGAAATAATACATAACAACTGATGA
AATGCCAATTTAGGTATCCATTCTAATGAGCATAAGGTTGACAGTAGTATACAAGGCCCTCTCT
CACATGTTTGCAAAGCACATGAGAAAATCTTTAATGAGTTACCAGTATTATTAAAAGACATGCC
CCAGCTACCAATAGAAGAAATGCTCTCAACGTCAAAAACGTTCATCTATGTTTAGCAGCAAAAA
AAAAATCTTTTTGATGTTCTGGAGATTCTGTGGCTGAGATCTGTGGTAAGGAAGAATAGGGAAG
CCGAGTTCAGATCCCATTGATGCCACAAATGTATGTGGCTCACATGAGCAGGGGTCTCATTTTT
GATGTGCTTCTGTCTGCTCACTTGTGAAACAGCTAAAAAGAAAAATCTACCTCACAGGTACTGT
GAGAGCAAATCACATTTGCTAATAAGTATTTTGAGATCTTTAGTTTAAAAGGTGCTATGTAATT
CCGTGTGTATCACGCACTATGCTAAATGCTAAAATGATTGCAGTCATTTTAAAGATGGTTATCC
ATGATGGCAACATCATCTTAATATAACAGTTTACCAAAATATTGACCGTGAACTATCAGTGTAC
CTAATTCTTGGAAGACTTGAGTCTCCTTGCCTGTAAGTTAGTTGATTAGGGAAGCTTCTTCCTC
CACCACACCATGGTCTCTCATTCTGGTGATGAATTTGTCACTTCAGTGCATTGCCTTGGCATCC
CAGGATGTTTAAAGCAAAAAGAATCTGCTTTGCTTTGGGGAGGAGCTTTGTACAGGTTTTGCCA
AACACAAACATTTGCCCTGAATTCATAAACCTCGTTAGAACACGTAGAGCTAATCTGCTCCCTG
GGAAGATGAAAATCTTCAGCAAATCTCCACAGTCACACATTTACCATCCATGCTCTACTCAGTG
TTGGGATGAAAAGAAAGCCCCACCACTGAAAAGGGTTGTTCGTTTGAGCTATTTTCTTTGCACA
TTGACCTTTGCGAAACCCCCATAGAAGCTGGTCGTGATGGGGATACAAAGAATAAATGGAGTTC
CGTAATCACATAATCCCTTGCTAGGAAACATTTGATATCTCATCACCCCCAAAGTACTAAATAC
TGTAGGACTTCCCATCCTTTAATAACGATGGTGTCAAGTGACCCGGGAAAAGCTGTAACAGGAC
AAGGGGAGTCACCCTCCCACCAGCTAGCCTCAAACCCCAAGAGCTCTATGGCTGGGAAAGTCTC
GCACTCTCATGCCTCATTGGCCCCCCAGCTGCACAGCTGAATGCAGTCTCTGTCTCCTGCTCTG
GCCTCTATCCCATTCAGCCAAACCACTTTTCATGTCCAAAATCTCACACTATGATAACCATGTA
TGCACACCTATGAACTGCTTTATATGTATGTGCAAAATATGCATAGAGCCCTAATCTTGGAAAG
GAGCAAAAAAAAAAATCGGAAAATCATGTGTCTTAAAGACTATTTCTTAACATTTTTATGCTAC
ATAGTACCCTTATGACAAACATGTAAATAGACACCCAAGATTACATGTATATATTTTAAAGGCG
CTTTTCTTGTCACCTCAATTGTATGTACAGCTAGAATCTGCTTGATAGGTTAACATTTTCCTCT
GCATGGAACTTGATGAGGTAAGGCCATTTGTCCGGTATCTCAATAGCCTTAAGCATGGTCGCTC
TCTGTTTGTTTTTTTGGTTTTGGTTTTGGTTTTTGGTTTTTGTTTTTTTTTTTTCTTTTTTGGA
TGTTCAAAAAAGAAATGTTTAGCTTATCAAGGAAAAGTTCTAATTTTCTACTTTTGTTAATTCT
ATGACAAGAGAGTGGTCAGGTTATTGTCAAATATTAAGCCATTCTTAGCATTTGTTTAAGAAAA
CTATTTCATAATAATGGCAGTATTCTGGGCCTGGGGGTTTTCGCTCAGTGGTAAACACTTCCCT
AGCATGCAGAGGGCTCTGGGTCCGTCCTCAGCACTGCAATAATAAAGTTAAAATAACGGCAGCC
CTCCTGTACCAGAAGTCACTCAAATAATGTTCTAAACACTGTCTGGCTCCCCACTATTTCTCCG
TTATGTACGGGATAACATCAGCACCTAATCTTAAAAGCTTCTTCATGTATTTCATAGAGGGAAA
AAAAAGAATCCTTTCTCTTTGGTGCCTCCTTTATGTGGCTCTGTGTCCTCTTGGAGCAGTCAAT
ACACAACGATGTACTTTTAAATAACCAGATTCAAAACACGAAGACCATTTTTGATTGGAATTAA
ATACGGAAGAACAAAACCCCTTGTGTGATAAGATACGGAGGGGAAACAAACTCTATACCGAGAA
GTCGAGGAAGGAGTTTTTCAATCAAATTTCTTCTAACAAGAGACCATGGGATATTTATGTGCAG
TGTGTGGAATTCATTTTCTACCTTTCCTAATACGTGCGCTCAAGGCGGGAACTGATCGTGTCAT
TTCTGTAAAGCGGAAGATACTTTTTATAAGCTACAGGTAACTGAGGAATGAAAGAAGTAATTCA
CTAGAGACGCTTGTTGATAATTGACCTTTAGGTATATTGTTATAAATGAATGATTGTATTTATG
TATTTATTTGTTCGAAATTGTACATATGGTTTTGCCAAAAGTAACTGTGTGTTGAAGTGCACTC
TCTGGGTTTGTAGTGCTATTTAGGGTTACATGGGTTGCCAATCAAGCTGCTAATCAGAATACTA
TTTTTTTGTATCAGTGTTACAACATGTGACGAATAGATGACGCTGTCTTTCCATTCATTCTCTC
TCCCTTCCTCTTGAAATGTAAACTGTTGGTTGAAAGCGCGATGCGGTTGGACAGGCCCATCTGT
CAAGAGGAGGATCATGGTTTCATAAGACTGATTTTTTTAAACTCCTGAGACAAATAAACAAAAG
AAGAACTCA

hide sequence

RefSeq Acc Id:

XM_039105589 ⟹ XP_038961517

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	72,661,410 - 73,234,447 (+)	NCBI
mRatBN7.2	3	52,253,451 - 52,826,508 (+)	NCBI

RefSeq Acc Id:

XM_039105590 ⟹ XP_038961518

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	73,113,863 - 73,234,447 (+)	NCBI
mRatBN7.2	3	52,705,913 - 52,826,508 (+)	NCBI

RefSeq Acc Id:

XM_063284266 ⟹ XP_063140336

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	72,661,576 - 73,023,421 (+)	NCBI

RefSeq Acc Id:

XM_063284267 ⟹ XP_063140337

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	72,661,576 - 73,023,421 (+)	NCBI

RefSeq Acc Id:

XM_063284268 ⟹ XP_063140338

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	72,661,576 - 73,023,421 (+)	NCBI

RefSeq Acc Id:

XM_063284269 ⟹ XP_063140339

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	72,661,576 - 73,023,421 (+)	NCBI

RefSeq Acc Id:

XM_063284271 ⟹ XP_063140341

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	72,661,410 - 73,234,447 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102424	(Get FASTA)	NCBI Sequence Viewer
	NP_001421333	(Get FASTA)	NCBI Sequence Viewer
	NP_001421334	(Get FASTA)	NCBI Sequence Viewer
	XP_017447431	(Get FASTA)	NCBI Sequence Viewer
	XP_017447434	(Get FASTA)	NCBI Sequence Viewer
	XP_017447435	(Get FASTA)	NCBI Sequence Viewer
	XP_017447437	(Get FASTA)	NCBI Sequence Viewer
	XP_038961517	(Get FASTA)	NCBI Sequence Viewer
	XP_038961518	(Get FASTA)	NCBI Sequence Viewer
	XP_063140336	(Get FASTA)	NCBI Sequence Viewer
	XP_063140337	(Get FASTA)	NCBI Sequence Viewer
	XP_063140338	(Get FASTA)	NCBI Sequence Viewer
	XP_063140339	(Get FASTA)	NCBI Sequence Viewer
	XP_063140341	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL79040	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000010018
	ENSRNOP00000010018.4
	ENSRNOP00000086959
	ENSRNOP00000086959.1
	ENSRNOP00000090409.1
	ENSRNOP00000102829
	ENSRNOP00000104470
	ENSRNOP00000106104

RefSeq Acc Id:

NP_001102424 ⟸ NM_001108954

- UniProtKB:

D3ZPD8 (UniProtKB/TrEMBL), A6HLY9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASKVSCLYVLTVVCWASALWYLSITRPTSSYTGSKPFSHLTVARKNFTFGNIRTRPINPHSFE
FLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQ
MVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLL
KPSTKPRRRYFTGYVINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSL
HTRLLHLEDVYVGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDMSS
KKHLRC

hide sequence

RefSeq Acc Id:	XP_017447431 ⟸ XM_017591942
- Peptide Label:	isoform X2
- UniProtKB:	D3ZPD8 (UniProtKB/TrEMBL), A6HLY9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASKVSCLYVLTVVCWASALWYLSITRPTSSYTGSKPFSHLTVARKNFTFGNIRTRPINPHSFE FLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQ MVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLL KPSTKPRRRYFTGYVINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSL HTRLLHLEDVYVGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDMSS KKHLRC hide sequence

RefSeq Acc Id:

XP_017447434 ⟸ XM_017591945

- Peptide Label:

isoform X2

- Sequence:

show sequence

MASKVSCLYVLTVVCWASALWYLSITRPTSSYTGSKPFSHLTVARKNFTFGNIRTRPINPHSFE
FLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQ
MVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLL
KPSTKPRRRYFTGYVINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSL
HTRLLHLEDVYVGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDMSS
KKHLRC

hide sequence

RefSeq Acc Id:	XP_017447435 ⟸ XM_017591946
- Peptide Label:	isoform X2
- UniProtKB:	D3ZPD8 (UniProtKB/TrEMBL), A6HLY9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASKVSCLYVLTVVCWASALWYLSITRPTSSYTGSKPFSHLTVARKNFTFGNIRTRPINPHSFE FLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQ MVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLL KPSTKPRRRYFTGYVINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSL HTRLLHLEDVYVGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDMSS KKHLRC hide sequence

RefSeq Acc Id:

XP_017447437 ⟸ XM_017591948

- Peptide Label:

isoform X2

- Sequence:

show sequence

MASKVSCLYVLTVVCWASALWYLSITRPTSSYTGSKPFSHLTVARKNFTFGNIRTRPINPHSFE
FLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQ
MVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLL
KPSTKPRRRYFTGYVINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSL
HTRLLHLEDVYVGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDMSS
KKHLRC

hide sequence

Ensembl Acc Id:

ENSRNOP00000010018 ⟸ ENSRNOT00000010018

RefSeq Acc Id:	XP_038961517 ⟸ XM_039105589
- Peptide Label:	isoform X2
- UniProtKB:	D3ZPD8 (UniProtKB/TrEMBL), A6HLY9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961518 ⟸ XM_039105590
- Peptide Label:	isoform X2
- UniProtKB:	D3ZPD8 (UniProtKB/TrEMBL), A6HLY9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000090409 ⟸ ENSRNOT00000102600

Ensembl Acc Id:

ENSRNOP00000086959 ⟸ ENSRNOT00000097712

RefSeq Acc Id:	XP_063140341 ⟸ XM_063284271
- Peptide Label:	isoform X2
- UniProtKB:	A6HLY9 (UniProtKB/TrEMBL), D3ZPD8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140339 ⟸ XM_063284269
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063140338 ⟸ XM_063284268
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063140336 ⟸ XM_063284266
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063140337 ⟸ XM_063284267
- Peptide Label:	isoform X1

Ensembl Acc Id:

ENSRNOP00000104470 ⟸ ENSRNOT00000170985

Ensembl Acc Id:

ENSRNOP00000101475 ⟸ ENSRNOT00000160916

Ensembl Acc Id:

ENSRNOP00000112461 ⟸ ENSRNOT00000125515

Ensembl Acc Id:

ENSRNOP00000098763 ⟸ ENSRNOT00000167879

Ensembl Acc Id:

ENSRNOP00000102829 ⟸ ENSRNOT00000172616

Ensembl Acc Id:

ENSRNOP00000106104 ⟸ ENSRNOT00000138050

Ensembl Acc Id:

ENSRNOP00000100957 ⟸ ENSRNOT00000162858

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZPD8-F1-model_v2	AlphaFold	D3ZPD8	1-326	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311898	AgrOrtholog
BioCyc Gene	G2FUF-49526	BioCyc
BioCyc Pathway	PWY-7433 [mucin core 1 and core 2 O-glycosylation]	BioCyc
BioCyc Pathway Image	PWY-7433	BioCyc
Ensembl Genes	ENSRNOG00000007625	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000010018	ENTREZGENE
	ENSRNOT00000010018.5	UniProtKB/TrEMBL
	ENSRNOT00000097712	ENTREZGENE
	ENSRNOT00000097712.1	UniProtKB/TrEMBL
	ENSRNOT00000102600.1	UniProtKB/TrEMBL
	ENSRNOT00000138050	ENTREZGENE
	ENSRNOT00000170985	ENTREZGENE
	ENSRNOT00000172616	ENTREZGENE
Gene3D-CATH	3.90.550.50	UniProtKB/TrEMBL
InterPro	Glyco_trans_31	UniProtKB/TrEMBL
	Nucleotide-diphossugar_trans	UniProtKB/TrEMBL
KEGG Report	rno:366064	UniProtKB/TrEMBL
NCBI Gene	366064	ENTREZGENE
PANTHER	BETA-1,3-GALACTOSYLTRANSFERASE 1	UniProtKB/TrEMBL
	Glyco_trans_31	UniProtKB/TrEMBL
Pfam	Galactosyl_T	UniProtKB/TrEMBL
PhenoGen	B3galt1	PhenoGen
RatGTEx	ENSRNOG00000007625	RatGTEx
Superfamily-SCOP	SSF53448	UniProtKB/TrEMBL
UniProt	A6HLY9	ENTREZGENE, UniProtKB/TrEMBL
	D3ZPD8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-12-02	B3galt1	Beta-1,3-galactosyltransferase 1	B3galt1	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2015-11-25	B3galt1	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1	B3galt1	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	B3galt1	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	B3galt1_predicted	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 (predicted)	'predicted' is removed	2292626	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Annotations - KEGG (archival)

BioCyc Pathways

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Imported Disease Annotations - ClinVar

Imported Annotations - KEGG (archival)

BioCyc Pathways