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Gene: Tcerg1 (transcription elongation regulator 1) Rattus norvegicus
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Symbol: Tcerg1
Name: transcription elongation regulator 1
Description: Predicted to have several functions, including RNA polymerase II repressing transcription factor binding activity; identical protein binding activity; and transcription corepressor activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to localize to nucleoplasm. Orthologous to human TCERG1 (transcription elongation regulator 1); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Ca150; coactivator of 150 kD; LOC307474; transcription elongation regulator 1 (CA150)
Orthologs:
Homo sapiens (human) : TCERG1 (transcription elongation regulator 1)  HGNC  Alliance
Mus musculus (house mouse) : Tcerg1 (transcription elongation regulator 1 (CA150))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tcerg1 (transcription elongation regulator 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TCERG1 (transcription elongation regulator 1)
Canis lupus familiaris (dog) : TCERG1 (transcription elongation regulator 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tcerg1 (transcription elongation regulator 1)
Sus scrofa (pig) : TCERG1 (transcription elongation regulator 1)
Chlorocebus sabaeus (African green monkey) : TCERG1 (transcription elongation regulator 1)
Heterocephalus glaber (naked mole-rat) : Tcerg1 (transcription elongation regulator 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01836,796,290 - 36,889,966 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1836,829,062 - 36,889,966 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01836,491,800 - 36,552,727 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41835,716,853 - 35,778,041 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11835,752,130 - 35,813,071 (+)NCBI
Celera1834,100,586 - 34,161,245 (+)NCBICelera
Cytogenetic Map18p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tcerg1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311748
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.