Cnbd2 (cyclic nucleotide binding domain containing 2) - Rat Genome Database

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Gene: Cnbd2 (cyclic nucleotide binding domain containing 2) Rattus norvegicus
Analyze
Symbol: Cnbd2
Name: cyclic nucleotide binding domain containing 2
RGD ID: 1311678
Description: Predicted to enable cAMP binding activity. Predicted to be involved in spermatogenesis. Predicted to be located in cytosol. Predicted to be part of ribonucleoprotein complex. Orthologous to human CNBD2 (cyclic nucleotide binding domain containing 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Cnmpd1; cyclic nucleotide (cNMP) binding domain containing 1; cyclic nucleotide-binding domain-containing protein 2; hypothetical protein LOC296311; LOC296311; LRRGT00127; RGD1311678; similar to 4921517L17Rik protein; uncharacterized protein LOC296311
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83165,279,157 - 165,357,582 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3165,279,204 - 165,361,688 (+)EnsemblGRCr8
mRatBN7.23144,819,166 - 144,884,825 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3144,819,195 - 144,901,583 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3148,684,840 - 148,750,461 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03157,302,142 - 157,367,771 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03155,041,561 - 155,107,191 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03152,382,245 - 152,448,105 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3152,402,520 - 152,465,228 (+)Ensemblrn6Rnor6.0
Rnor_5.03159,225,955 - 159,308,533 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43146,726,507 - 146,793,519 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3143,540,914 - 143,606,504 (+)NCBICelera
RGSC_v3.13146,632,415 - 146,682,666 (+)NCBI
Cytogenetic Map3q42NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
spermatogenesis  (IBA,ISO)
translation  (IEA)

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:24339785  


Genomics

Comparative Map Data
Cnbd2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83165,279,157 - 165,357,582 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3165,279,204 - 165,361,688 (+)EnsemblGRCr8
mRatBN7.23144,819,166 - 144,884,825 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3144,819,195 - 144,901,583 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3148,684,840 - 148,750,461 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03157,302,142 - 157,367,771 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03155,041,561 - 155,107,191 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03152,382,245 - 152,448,105 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3152,402,520 - 152,465,228 (+)Ensemblrn6Rnor6.0
Rnor_5.03159,225,955 - 159,308,533 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43146,726,507 - 146,793,519 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3143,540,914 - 143,606,504 (+)NCBICelera
RGSC_v3.13146,632,415 - 146,682,666 (+)NCBI
Cytogenetic Map3q42NCBI
CNBD2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382035,954,386 - 36,030,700 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2035,954,564 - 36,030,700 (+)Ensemblhg38GRCh38
GRCh372034,556,512 - 34,618,622 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362034,019,943 - 34,082,036 (+)NCBIBuild 36Build 36hg18NCBI36
Build 342034,019,942 - 34,082,036NCBI
Celera2031,304,814 - 31,366,608 (+)NCBICelera
Cytogenetic Map20q11.23NCBI
HuRef2031,334,320 - 31,396,271 (+)NCBIHuRef
CHM1_12034,458,527 - 34,520,618 (+)NCBICHM1_1
T2T-CHM13v2.02037,675,577 - 37,751,679 (+)NCBIT2T-CHM13v2.0
Cnbd2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392156,153,866 - 156,217,558 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2156,154,219 - 156,217,558 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm382156,311,946 - 156,375,638 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2156,312,299 - 156,375,638 (+)Ensemblmm10GRCm38
MGSCv372156,138,209 - 156,201,374 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
Celera2162,248,786 - 162,311,866 (+)NCBICelera
Cytogenetic Map2H1NCBI
cM Map277.39NCBI
Cnbd2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542225,500,550 - 25,548,699 (-)Ensembl
ChiLan1.0NW_00495542225,500,550 - 25,560,937 (-)NCBIChiLan1.0ChiLan1.0
CNBD2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22141,692,332 - 41,766,777 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12041,684,827 - 41,759,863 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02032,287,472 - 32,361,689 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12033,408,479 - 33,481,682 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2033,408,479 - 33,481,682 (+)EnsemblpanPan2panpan1.1
CNBD2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12424,823,191 - 24,883,397 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2424,823,284 - 24,883,396 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2424,469,603 - 24,529,904 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02425,515,371 - 25,575,706 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2425,515,542 - 25,575,705 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12424,814,501 - 24,861,000 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02424,895,399 - 24,955,464 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02425,385,083 - 25,445,467 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Cnbd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640173,795,724 - 173,857,034 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365614,901,253 - 4,941,053 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365614,891,801 - 4,953,614 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CNBD2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1739,255,773 - 39,309,436 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11739,245,375 - 39,309,444 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21744,651,723 - 44,691,750 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CNBD2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1256,814,312 - 56,889,887 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl256,828,034 - 56,889,862 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660873,298,590 - 3,372,958 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cnbd2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248423,411,052 - 3,496,966 (-)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Cnbd2
246 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:99
Count of miRNA genes:92
Interacting mature miRNAs:94
Transcripts:ENSRNOT00000027086
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312673Scl63Serum cholesterol level QTL 630.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)398535255168026850Rat
1598877Bp285Blood pressure QTL 2851.50.03arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3120538241165538241Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3130656562169034231Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)398535386161695835Rat
1298068Bp167Blood pressure QTL 1670.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3141074471169034231Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)331172320163586636Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)347233211147415807Rat
2298477Eau4Experimental allergic uveoretinitis QTL 40.0011uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)3137398739169034231Rat
61335Bp20Blood pressure QTL 203arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3141339236155617360Rat
1581568Rf53Renal function QTL 53urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)356395968161299569Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3112681431157681431Rat
1331726Bp208Blood pressure QTL 2083.129arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3141339013162184794Rat
1300173Rf11Renal function QTL 113.38renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)3121056165145956249Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3131635904169034231Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3122438700167438700Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)359242096157323038Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)343827364169034231Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3127162703168026850Rat
631841Niddm39Non-insulin dependent diabetes mellitus QTL 393.36blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)394856903159898684Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3118839124163839124Rat
619618Rf3Renal disease susceptibility QTL 36.50.001urine albumin amount (VT:0002871)urine albumin excretion rate to body weight ratio (CMO:0001270)3107693393152693393Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3121056165157309487Rat
5686842Rf59Renal function QTL 59urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)3140069424146976080Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)341874578155617519Rat
2312659Slep7Serum leptin concentration QTL 70.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)398535255168026850Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3130193298161695983Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)341874578155617519Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)378196190146592722Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3130656562169034231Rat
8552952Pigfal13Plasma insulin-like growth factor 1 level QTL 13blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)3138799500169034231Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3124122556169034231Rat
2293087Iddm27Insulin dependent diabetes mellitus QTL 272.68blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)397551417147415807Rat
2312670Bw94Body weight QTL 940.01inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)398535255168026850Rat

Markers in Region
AI169436  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23144,884,585 - 144,884,678 (+)MAPPERmRatBN7.2
mRatBN7.23144,884,585 - 144,884,678 (-)MAPPERmRatBN7.2
Rnor_6.03153,666,916 - 153,667,008NCBIRnor6.0
Rnor_6.03152,447,866 - 152,447,958NCBIRnor6.0
Rnor_5.03158,105,824 - 158,105,916UniSTSRnor5.0
Rnor_5.03159,243,360 - 159,243,452UniSTSRnor5.0
RGSC_v3.43146,776,519 - 146,776,611UniSTSRGSC3.4
Celera3143,606,265 - 143,606,357UniSTS
RH 3.4 Map31333.8UniSTS
Cytogenetic Map3q42UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 90 59 6 354 190 11 142 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000027086   ⟹   ENSRNOP00000027086
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3165,299,986 - 165,361,688 (+)Ensembl
mRatBN7.2 Ensembl3144,839,858 - 144,901,583 (+)Ensembl
Rnor_6.0 Ensembl3152,402,520 - 152,465,228 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000095390   ⟹   ENSRNOP00000093432
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3165,279,321 - 165,344,925 (+)Ensembl
mRatBN7.2 Ensembl3144,819,195 - 144,884,825 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000144587   ⟹   ENSRNOP00000103358
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3165,279,292 - 165,344,926 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000147018   ⟹   ENSRNOP00000112305
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3165,279,296 - 165,344,926 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000165914   ⟹   ENSRNOP00000102341
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3165,279,204 - 165,344,927 (+)Ensembl
RefSeq Acc Id: NM_001304368   ⟹   NP_001291297
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83165,279,303 - 165,344,927 (+)NCBI
mRatBN7.23144,819,195 - 144,884,825 (+)NCBI
Rnor_6.03152,382,245 - 152,448,105 (+)NCBI
Celera3143,540,914 - 143,606,504 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008762320   ⟹   XP_008760542
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83165,292,888 - 165,357,582 (+)NCBI
mRatBN7.23144,825,388 - 144,884,825 (+)NCBI
Rnor_6.03152,388,479 - 152,448,105 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039104613   ⟹   XP_038960541
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83165,279,403 - 165,357,582 (+)NCBI
mRatBN7.23144,819,166 - 144,884,825 (+)NCBI
RefSeq Acc Id: XM_039104614   ⟹   XP_038960542
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83165,279,403 - 165,315,718 (+)NCBI
mRatBN7.23144,819,166 - 144,855,616 (+)NCBI
RefSeq Acc Id: XM_063283374   ⟹   XP_063139444
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83165,279,403 - 165,357,582 (+)NCBI
RefSeq Acc Id: XM_063283375   ⟹   XP_063139445
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83165,279,157 - 165,357,582 (+)NCBI
RefSeq Acc Id: XP_008760542   ⟸   XM_008762320
- Peptide Label: isoform X3
- UniProtKB: A6KIA6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001291297   ⟸   NM_001304368
- UniProtKB: A0A8I6AJL9 (UniProtKB/TrEMBL),   A6KIA6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000027086   ⟸   ENSRNOT00000027086
RefSeq Acc Id: XP_038960541   ⟸   XM_039104613
- Peptide Label: isoform X2
- UniProtKB: A6KIA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038960542   ⟸   XM_039104614
- Peptide Label: isoform X5
Ensembl Acc Id: ENSRNOP00000093432   ⟸   ENSRNOT00000095390
RefSeq Acc Id: XP_063139445   ⟸   XM_063283375
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063139444   ⟸   XM_063283374
- Peptide Label: isoform X1
- UniProtKB: A6KIA6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000103358   ⟸   ENSRNOT00000144587
Ensembl Acc Id: ENSRNOP00000102341   ⟸   ENSRNOT00000165914
Ensembl Acc Id: ENSRNOP00000112305   ⟸   ENSRNOT00000147018
Protein Domains
Cyclic nucleotide-binding

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6QI81-F1-model_v2 AlphaFold Q6QI81 1-1042 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311678 AgrOrtholog
BioCyc Gene G2FUF-47099 BioCyc
Ensembl Genes ENSRNOG00000019992 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000027086.7 UniProtKB/TrEMBL
  ENSRNOT00000095390 ENTREZGENE
  ENSRNOT00000095390.1 UniProtKB/TrEMBL
  ENSRNOT00000147018 ENTREZGENE
Gene3D-CATH 1.10.1200.240 UniProtKB/TrEMBL
  1.10.1650.10 UniProtKB/TrEMBL
  2.60.120.10 UniProtKB/TrEMBL
InterPro 60S_ribosomal_L19/L19e_sf UniProtKB/TrEMBL
  cNMP-bd-like UniProtKB/TrEMBL
  cNMP-bd_CS UniProtKB/TrEMBL
  cNMP-bd_dom UniProtKB/TrEMBL
  Ribosomal_L19/L19e UniProtKB/TrEMBL
  Ribosomal_L19/L19e_dom1 UniProtKB/TrEMBL
  RmlC-like_jellyroll UniProtKB/TrEMBL
KEGG Report rno:296311 UniProtKB/TrEMBL
NCBI Gene 296311 ENTREZGENE
PANTHER CYCLIC NUCLEOTIDE-BINDING DOMAIN-CONTAINING PROTEIN 2 UniProtKB/TrEMBL
  PTHR23011 UniProtKB/TrEMBL
Pfam cNMP_binding UniProtKB/TrEMBL
  Ribosomal_L19e UniProtKB/TrEMBL
  Ribosomal_L19e_C UniProtKB/TrEMBL
PhenoGen Cnbd2 PhenoGen
PROSITE CNMP_BINDING_1 UniProtKB/TrEMBL
  CNMP_BINDING_3 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000019992 RatGTEx
SMART cNMP UniProtKB/TrEMBL
  Ribosomal_L19e UniProtKB/TrEMBL
Superfamily-SCOP SSF48140 UniProtKB/TrEMBL
  SSF51206 UniProtKB/TrEMBL
UniProt A0A8I6AJL9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8J8XUM3_RAT UniProtKB/TrEMBL
  A6KIA6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-11-21 Cnbd2  cyclic nucleotide binding domain containing 2  Cnmpd1  cyclic nucleotide (cNMP) binding domain containing 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-11-07 Cnmpd1  cyclic nucleotide (cNMP) binding domain containing 1  RGD1311678  similar to 4921517L17Rik protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 RGD1311678  similar to 4921517L17Rik protein  RGD1311678_predicted  similar to 4921517L17Rik protein (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1311678_predicted  similar to 4921517L17Rik protein (predicted)  LOC296311_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC296311_predicted  similar to 4921517L17Rik protein (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL