Fndc3b (fibronectin type III domain containing 3B)

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes Projects (beta) QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

Gene: Fndc3b (fibronectin type III domain containing 3B) Rattus norvegicus

Analyze

Symbol:

Fndc3b

Name:

fibronectin type III domain containing 3B

RGD ID:

1311673

Description:

Predicted to act upstream of or within several processes, including negative regulation of osteoblast differentiation; substrate adhesion-dependent cell spreading; and type II pneumocyte differentiation. Predicted to be located in endoplasmic reticulum. Orthologous to human FNDC3B (fibronectin type III domain containing 3B); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

fibronectin type III domain-containing protein 3B; LOC294925; RGD1311673; similar to FAD104

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	2	110,311,439 - 110,617,504 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	110,312,694 - 110,547,830 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	116,968,488 - 117,193,607 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	115,081,046 - 115,306,183 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	109,795,310 - 110,019,577 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	113,109,949 - 113,415,171 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	113,112,902 - 113,345,577 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	132,827,872 - 133,131,057 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	113,315,670 - 113,558,806 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	113,257,537 - 113,503,798 (-)	NCBI
Celera	2	105,516,892 - 105,741,723 (-)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute promyelocytic leukemia (ISO)

Fanconi syndrome (ISO)

genetic disease (ISO)

keratoconus (ISO)

open-angle glaucoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP,ISO)

17beta-estradiol (EXP,ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4-dinitrotoluene (EXP)

2-methoxyethanol (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

5-fluorouracil (ISO)

acetamide (EXP)

aflatoxin B1 (EXP,ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

Aroclor 1254 (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

caffeine (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chloropicrin (ISO)

choline (ISO)

cisplatin (ISO)

clofibric acid (EXP)

cobalt dichloride (ISO)

copper atom (ISO)

copper(0) (ISO)

coumestrol (ISO)

cyclophosphamide (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

diclofenac (ISO)

dicrotophos (ISO)

diethyl maleate (ISO)

doxorubicin (ISO)

entinostat (ISO)

folic acid (ISO)

fulvestrant (ISO)

furan (ISO)

gentamycin (EXP)

glafenine (EXP)

indometacin (ISO)

ivermectin (ISO)

L-methionine (ISO)

leflunomide (ISO)

levofloxacin (EXP)

lipopolysaccharide (ISO)

methapyrilene (EXP,ISO)

methoxychlor (EXP)

methylmercury chloride (ISO)

N,N-diethyl-m-toluamide (EXP)

N-nitrosodiethylamine (EXP,ISO)

nefazodone (EXP)

nickel atom (ISO)

ochratoxin A (ISO)

oxaliplatin (EXP)

paracetamol (ISO)

pentane-2,3-dione (EXP)

permethrin (EXP)

phenobarbital (ISO)

potassium chromate (ISO)

propanal (ISO)

propiconazole (ISO)

quercetin (ISO)

resveratrol (ISO)

rimonabant (ISO)

senecionine (ISO)

silicon dioxide (ISO)

sodium fluoride (ISO)

sulforaphane (EXP)

testosterone (ISO)

tetrachloromethane (EXP,ISO)

thapsigargin (ISO)

topotecan (EXP)

triptonide (ISO)

tunicamycin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

fibroblast migration (ISO)

negative regulation of osteoblast differentiation (ISO)

positive regulation of fat cell differentiation (ISO)

positive regulation of fibroblast proliferation (ISO)

substrate adhesion-dependent cell spreading (ISO)

type II pneumocyte differentiation (ISO)

Cellular Component

endoplasmic reticulum (ISO)

membrane (IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15527760	PMID:19138685	PMID:20493170	PMID:21704616	PMID:22658674

Genomics

Comparative Map Data

Fndc3b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	2	110,311,439 - 110,617,504 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	110,312,694 - 110,547,830 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	116,968,488 - 117,193,607 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	115,081,046 - 115,306,183 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	109,795,310 - 110,019,577 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	113,109,949 - 113,415,171 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	113,112,902 - 113,345,577 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	132,827,872 - 133,131,057 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	113,315,670 - 113,558,806 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	113,257,537 - 113,503,798 (-)	NCBI
Celera	2	105,516,892 - 105,741,723 (-)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

FNDC3B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	172,039,578 - 172,401,669 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	172,039,578 - 172,401,669 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	171,757,368 - 172,119,459 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	173,312,936 - 173,601,181 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	173,241,087 - 173,601,189	NCBI
Celera	3	170,157,091 - 170,517,099 (+)	NCBI		Celera
Cytogenetic Map	3	q26.31	NCBI
HuRef	3	169,127,111 - 169,488,878 (+)	NCBI		HuRef
CHM1_1	3	171,720,292 - 172,081,379 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	174,823,628 - 175,186,764 (+)	NCBI		T2T-CHM13v2.0

Fndc3b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	27,470,284 - 27,765,469 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	27,470,311 - 27,765,456 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	27,416,135 - 27,711,307 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	27,416,162 - 27,711,307 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	27,315,084 - 27,609,361 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	27,607,234 - 27,901,450 (-)	NCBI		MGSCv36	mm8
Celera	3	27,376,641 - 27,669,175 (-)	NCBI		Celera
Cytogenetic Map	3	A3	NCBI
cM Map	3	10.91	NCBI

Fndc3b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	2,114,663 - 2,438,491 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	2,173,804 - 2,435,324 (+)	NCBI	ChiLan1.0	ChiLan1.0

FNDC3B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	3	169,924,693 - 170,288,544 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	169,047,205 - 169,408,664 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	177,230,070 - 177,590,367 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	177,301,873 - 177,590,367 (+)	Ensembl	panpan1.1		panPan2

FNDC3B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	36,373,966 - 36,640,851 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	36,302,386 - 36,637,583 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	45,314,513 - 45,654,098 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	36,385,781 - 36,725,342 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	36,410,103 - 36,722,288 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	36,325,171 - 36,664,348 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	36,289,209 - 36,632,806 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	36,551,508 - 36,891,246 (+)	NCBI		UU_Cfam_GSD_1.0

Fndc3b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	102,983,336 - 103,310,715 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936593	311,245 - 566,800 (-)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936593	311,245 - 638,625 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FNDC3B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	110,587,463 - 110,928,465 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	110,587,464 - 110,931,687 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	119,778,273 - 119,842,531 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FNDC3B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	17,060,117 - 17,428,340 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	17,059,959 - 17,428,339 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	25,823,243 - 26,183,994 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fndc3b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	50,111,346 - 50,450,164 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	50,111,873 - 50,447,035 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Fndc3b
1455 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	38
Count of miRNA genes:	36
Interacting mature miRNAs:	38
Transcripts:	ENSRNOT00000034096
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1302794	Stl27	Serum triglyceride level QTL 27	4.4	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	25413423	143657569	Rat
1358894	Kidm24	Kidney mass QTL 24	4.03		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358901	Cm38	Cardiac mass QTL 38	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1358887	Bw50	Body weight QTL 50	2.39		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
1358908	Bw49	Body weight QTL 49	3.36		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
1354603	Bp243	Blood pressure QTL 243	3.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	26917817	127469484	Rat
2290453	Scl55	Serum cholesterol level QTL 55	2.83		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	2	26917817	136917119	Rat
2293835	Kiddil5	Kidney dilation QTL 5	3.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	157142209	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	182042367	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	43154682	202446871	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	43154682	202446871	Rat
2293676	Bmd19	Bone mineral density QTL 19	10.7	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	2	43162366	111362592	Rat
2293682	Bmd24	Bone mineral density QTL 24	8.9	0.0001	femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	2	43162366	111362592	Rat
2293671	Bss44	Bone structure and strength QTL 44	10.97	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	2	43162366	148478373	Rat
1354601	Slep1	Serum leptin concentration QTL 1	5.39		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	2	43171017	184114403	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	46123260	202447032	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	56043031	202447032	Rat
1558648	Smcn1	Smooth muscle cell number QTL 1		0.039	blood vessel smooth muscle cell quantity (VT:0010525)	aorta smooth muscle cell count per unit vessel length (CMO:0001646)	2	59134147	127460910	Rat
61438	Cia7	Collagen induced arthritis QTL 7	4.6	0.0001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	2	59324377	141596857	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118275	202447032	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118463	226797303	Rat
7411551	Bw131	Body weight QTL 131	29.6	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	2	67942638	112942638	Rat
1558653	Prcr1	Prostate cancer resistance QTL 1	5		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	2	72532993	157142209	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	74786664	206665859	Rat
631198	Cm22	Cardiac mass QTL 22	4.3	0.0008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	76539322	150540526	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	76539322	202447032	Rat
2299162	Iddm32	Insulin dependent diabetes mellitus QTL 32	2.36		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	78665616	143657569	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	78665619	219826953	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	78665619	249053267	Rat
61392	Bp6	Blood pressure QTL 6	7		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	2	80270434	125270434	Rat
1598865	Bp296	Blood pressure QTL 296	2.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	81018907	126018907	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	81689826	221035911	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	81754530	222436696	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	81754530	227146641	Rat
1578772	Stresp14	Stress response QTL 14	5	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	2	82345893	130923501	Rat
7207808	Bmd89	Bone mineral density QTL 89	4.1		femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	2	88862519	133862519	Rat
2300165	Bmd49	Bone mineral density QTL 49	4.8	0.0001	lumbar vertebra mineral mass (VT:0010511)	bone mineral density (CMO:0001226)	2	88862519	133862519	Rat
2300170	Bmd45	Bone mineral density QTL 45	12.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	2	88862519	133862519	Rat
2300185	Bmd46	Bone mineral density QTL 46	8.4	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	2	88862519	133862519	Rat
1598862	Glom9	Glomerulus QTL 9	3.5		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	2	92337601	137337601	Rat
1598863	Cm65	Cardiac mass QTL 65	2.3		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	92337601	137337601	Rat
631566	Bp90	Blood pressure QTL 90		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	102803808	147803808	Rat
8662836	Vetf8	Vascular elastic tissue fragility QTL 8	0.66		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	104559726	149559726	Rat

Markers in Region

AA801108

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	110,313,078 - 110,313,259 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	113,111,589 - 113,111,769	NCBI	Rnor6.0
Rnor_5.0	2	132,829,512 - 132,829,692	UniSTS	Rnor5.0
RGSC_v3.4	2	113,314,216 - 113,314,396	UniSTS	RGSC3.4
Celera	2	105,515,438 - 105,515,618	UniSTS
RH 3.4 Map	2	716.0	UniSTS
Cytogenetic Map	2	q24	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	2	38	47	37	12	37	2	2	41	35	34	11	2
Low	1	5	10	4	7	4	6	9	33		7		6
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232216	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039101977	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC088301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000034096 ⟹ ENSRNOP00000038770

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	110,312,694 - 110,547,830 (-)	Ensembl
Rnor_6.0 Ensembl	2	113,112,902 - 113,345,577 (-)	Ensembl

RefSeq Acc Id:

NM_001191704 ⟹ NP_001178633

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	110,314,533 - 110,547,801 (-)	NCBI
Rnor_6.0	2	113,113,043 - 113,345,551 (-)	NCBI
Rnor_5.0	2	132,827,872 - 133,131,057 (-)	NCBI
Celera	2	105,516,892 - 105,741,723 (-)	NCBI

Sequence:

show sequence

ATGTACGTCACCATGATGATGACCGACCAGATCCCCCTGGAACTGCCACCCCTGCTCAATGGGG
AGGTGGCCATGATGCCCCACTTGGTGAACGGAGAAGCAGCTCAGCAGGTCATTCTTGTCCAAGT
CAACCCAGGTGAGACCTTTACAATCAGAGCCGAGGATGGGACACTTCAGTGCATCCAAGGACCT
GCCGAAGTCCCCATGATGTCACCCAATGGGTCCATCCCTCCTATCCATGTGCCCCCAGGTTACA
TCTCACAGGTGATTGAAGACAGCACCGGAGTCCGCCGGGTGGTGGTCACACCGCAGTCTCCCGA
GTGTTACCCACCGAGCTACCCCTCAGCCATGTCTCCAACCCATCACCTGCCCCCTTATCTGACC
CACCATCCACACTTCATCCAGAACTCGCACACCGCCTACTACCCGCCTGTCACCGTGCCTGGAG
ATATGCCACCCCAGTTTTTCCCCCAGCCTCACCTTCCTCCCACAATATATAGTGAGCAAGAAAT
CATCCCTCTGTATGGAATGTCGAGCTACATCACCCGAGAAGACCAGTACAGCAAACCACCACAC
AAGAAACTGAAGGACCGCCAGATTGACCGCCAGAATCGCCTCAACAGCCCGCCTTCCACCATCT
ACAAGAACAGCTGTGCCACCATGTACAACGGCTATGGGAAGGGCCACAGTGGAGGCAGCAGTGG
AGGTGGGGGAGGTGGCAGCGGTGGCGGACCTGGGATCAAGAAGACAGAGCGAAGAGCAAGAAGC
AGCCCCAAATCCAGTGATTCTGACTTGCAAGAGTATGAGTTGGAAGTAAGGAGGGTGCAGGACA
TCCTTTCGGGAATAGAGAAACCACAGGTGTCTAATATCCAGGCAAGAGCAGTGGTGCTATCTTG
GGCACCCCCTGTCGGACTGCCCTGTGGACCCCATGGTGGTCTTTCCTTCCCTTACAGCTATGAG
GTTGCTTTATCTGACAAAGGGCGAGATGGGAAATACAAGATCATTTACAGTGGAGAAGAATTGG
AGTGTAACCTGAAAGACCTCAGGCCTGCCACGGATTACCACGTGAGGGTATACGCCATGTACAA
TTCTGTCAAGGGATCCTGCTCCGAGCCAGTCAGCTTCACCACCCACAGCTGCGCACCAGAATGT
CCCTTCCCTCCCAAGCTGGCACACAGGAGCAAAAGTTCACTAACCTTGCAGTGGAAGGCTCCAA
TTGACAATGGTTCAAAAATCACCAGCTACCTTTTAGAATGGGATGAGGGAAAGAGGAACAGTGG
ATTCAGACAGTGTTTCTTTGGGGGCCAGAAGCACTGCAAGTTGACCAAGCTGTGTCCAGCCATG
GGCTACACATTCAGGCTCGCTGCTCGGAATGACATCGGCACCAGTGGTTACAGCCAGGAGGTCG
TGTGCTACACATTGGGAAACATCCCCCAGATGCCTTCAGCACCCCGGCTGGTCCGAGCTGGCGT
CACCTGGATCACACTGCAGTGGAGCAGGCCGGAAGGCTGCTCGCCTGAGGAAGTGATTACCTAC
ACCCTGGACATTCAGGAGGACGAGAACGATAACCATTTCCACCCAAGATACACTGGAGAGGACC
TAACCTGTACTGTGAAAAACCTCAAGCGCAGCACACAGTATAAATTCAGGCTGACTGCTTCTAA
TACGGAAGGGAAGAGCTGTCCGAGTGAAGTCCTGGTTTGTACAACCAGCCCCGACAGACCTGGA
CCTCCCACCAGACCCCTCCTCAAAGGACCCGTCACGTCGCATGGCTTCAGTGTCAAGTGGGATG
CTCCAAAGGACAACGGTGGCTCAGAAATCCTGAAGTATCTGCTGGAGATCACGGACGGTGCTTC
TGAAGCTGGTCAGTGGGAAGTGGCCTACAGTGGATCAGCTACAGAGTATGTCTTTACCCATTTG
AAACCAGGCACTTTGTACAAACTGCGAGCATGCTGCATCGGTACCGGTGGGCACAGTCAGTGCT
CTGAAAGTCTCCCTGTTCGCACACTAAGCCTTGCACCAGGTCAGTGCCGACCACCGAGGGTTTT
GGGTAGACCAAAGCACAAAGAAGTCCACTTAGAGTGGGATGTGCCTGCGTCTGAAGGTGGCTGC
GAGGTCTCAGAGTACAGTGTAGAAATGACGGAACCTGAGGAGGTAGCCTCAGAGGTGTACCACG
GGCCCGAGCTGGAGTGCACCGTTGGCAACCTGCTTCCCGGGACGGTGTACCGCTTCAGAGTGCG
GGCTCTGAATGACGGAGGGTATGGTCCCTACTCTGATGTGTCAGAGATCACCACTGCCGCAGGA
CCGCCTGGGCAGTGCAGGGCACCGTGTGTTTCCTTCACGCCTGATGGATGCGTCCTGGTGGGTT
GGGAGAGCCCTGAAAGCCCTGGTGCTGACATCTCCGAGTTCAGGTTGGAGTGGGGAGAAGACGA
GGAATCCTTAGAACTCATTTATCACGGGCCAGACACCTGCTTTGAGATCCGAGATCTGTTGCCT
GCTGCACAGTATTGCTGCAGACTCCAGGCCTTCAATCCAGCAGGCGCAGGGCCATATAGTGAGC
TCGTCCACTGCCAGACACCAGCCTCTGCCCCCGACCCTGTCTCCACTCTGTGTGTCCTGGAGGA
GGAGCCCCTCAGTGCCCACCTGGACTCACCCTCTGTGTGCCTTGTACTGACCTGGGAAGAGCCG
TGCAGTAATGGATCTGAAATCATTGCTTACAACATTGATCTGGGAGACACCTGCATTACTGTGG
GCAATACTACCACACATGTGTTGAAGAACCTCCTTCCCGAAACTACATACCGGATCAGAATTCA
GGCTGTCAATGATATTGGAGATGGACCGTTTAGTCAGTTCATCAAAGCAAAGACTCGGCCATTA
CCACCCTCGCCTCCTAGGCTGGAGTGTGCTGCGTCTGGTCCTCAGAGCCTGAAGCTCAAGTGGG
GAGACAGTAACTCTAAGATACATGCTGCTCATGACATGGTGTACACCCTGCAGTTGGAAGACAG
GAACAAGAGGTTTATCTCAATCTACCGAGGACCCAGCCACACCTACAAGGTCCAGAGACTGACA
GAGTTTACCTGCTACTCCTTCAGGATCCAGGCAACCAGCGAGGCAGGGGAGGGGCCTTTCTCAG
ACACCTACACCTTCAGTACAACCAAAAGTGTCCCTCCCACCCTCAAAGCACCTCGAGTGACGCA
GTTGGAAGGAAATTCCTGTGAAATCTTCTGGGAGACGGTACCACCGATGAAGGGCGACCCTGTG
AACTACGTTCTGCAGGTGTTGGTTGGAAGAGAATCTGAATACAAGCAGGTGTACAAGGGAGAAG
AAGCCACATTCCAAATCTCAGGCCTGCAGAGCAACACAGATTACAGGTTCCGCGTGTGTGCCTG
CCGCCGCTGTGTGGACACGTCTCAGGAGCTCAGCGGCGCTTTCAGCCCCTCTGCGGCTTTCGTG
TTACAACAGCGTGAGGTCTTGCTTACGGGGGACCTGGGAGGCATGGACGATGCCAAGATGAAGG
GCGTGATGCCTACCGATGAACAGTTTGCCGCCCTCATTGTGCTTGGCTTCGCAACCCTGTCCAT
CTTGTTTGCCTTTATATTACAGTACTTCCTAATGAAGTAAATCCAGCGACCAGAGGGATGCGCC
GAATGCCGCACACTTTAATACACATTTACTCAGA

hide sequence

RefSeq Acc Id:

XM_006232215 ⟹ XP_006232277

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	110,311,439 - 110,617,504 (-)	NCBI
Rnor_6.0	2	113,109,949 - 113,415,171 (-)	NCBI
Rnor_5.0	2	132,827,872 - 133,131,057 (-)	NCBI

Sequence:

show sequence

ATCCGGCGGGCGGCTGGCTGGGACGGCGTGGGCGACCCGGATTGCCGGCGCCCGGAGCCCCGTT
TCAGCCTGAGGGGAGGTAGCGTGTTGAGGGCAATTCTCCATGAATGTACGTCACCATGATGATG
ACCGACCAGATCCCCCTGGAACTGCCACCCCTGCTCAATGGGGAGGTGGCCATGATGCCCCACT
TGGTGAACGGAGAAGCAGCTCAGCAGGTCATTCTTGTCCAAGTCAACCCAGGTGAGACCTTTAC
AATCAGAGCCGAGGATGGGACACTTCAGTGCATCCAAGGACCTGCCGAAGTCCCCATGATGTCA
CCCAATGGGTCCATCCCTCCTATCCATGTGCCCCCAGGTTACATCTCACAGGTGATTGAAGACA
GCACCGGAGTCCGCCGGGTGGTGGTCACACCGCAGTCTCCCGAGTGTTACCCACCGAGCTACCC
CTCAGCCATGTCTCCAACCCATCACCTGCCCCCTTATCTGACCCACCATCCACACTTCATCCAG
AACTCGCACACCGCCTACTACCCGCCTGTCACCGTGCCTGGAGATATGCCACCCCAGTTTTTCC
CCCAGCCTCACCTTCCTCCCACAATATATAGTGAGCAAGAAATCATCCCTCTGTATGGAATGTC
GAGCTACATCACCCGAGAAGACCAGTACAGCAAACCACCACACAAGAAACTGAAGGACCGCCAG
ATTGACCGCCAGAATCGCCTCAACAGCCCGCCTTCCACCATCTACAAGAACAGCTGTGCCACCA
TGTACAACGGCTATGGGAAGGGCCACAGTGGAGGCAGCAGTGGAGGTGGGGGAGGTGGCAGCGG
TGGCGGACCTGGGATCAAGAAGACAGAGCGAAGAGCAAGAAGCAGCCCCAAATCCAGTGATTCT
GACTTGCAAGAGTATGAGTTGGAAGTAAGGAGGGTGCAGGACATCCTTTCGGGAATAGAGAAAC
CACAGGTGTCTAATATCCAGGCAAGAGCAGTGGTGCTATCTTGGGCACCCCCTGTCGGACTGCC
CTGTGGACCCCATGGTGGTCTTTCCTTCCCTTACAGCTATGAGGTTGCTTTATCTGACAAAGGG
CGAGATGGGAAATACAAGATCATTTACAGTGGAGAAGAATTGGAGTGTAACCTGAAAGACCTCA
GGCCTGCCACGGATTACCACGTGAGGGTATACGCCATGTACAATTCTGTCAAGGGATCCTGCTC
CGAGCCAGTCAGCTTCACCACCCACAGCTGCGCACCAGAATGTCCCTTCCCTCCCAAGCTGGCA
CACAGGAGCAAAAGTTCACTAACCTTGCAGTGGAAGGCTCCAATTGACAATGGTTCAAAAATCA
CCAGCTACCTTTTAGAATGGGATGAGGGAAAGAGGAACAGTGGATTCAGACAGTGTTTCTTTGG
GGGCCAGAAGCACTGCAAGTTGACCAAGCTGTGTCCAGCCATGGGCTACACATTCAGGCTCGCT
GCTCGGAATGACATCGGCACCAGTGGTTACAGCCAGGAGGTCGTGTGCTACACATTGGGAAACA
TCCCCCAGATGCCTTCAGCACCCCGGCTGGTCCGAGCTGGCGTCACCTGGATCACACTGCAGTG
GAGCAGGCCGGAAGGCTGCTCGCCTGAGGAAGTGATTACCTACACCCTGGACATTCAGGAGGAC
GAGAACGATAACCATTTCCACCCAAGATACACTGGAGAGGACCTAACCTGTACTGTGAAAAACC
TCAAGCGCAGCACACAGTATAAATTCAGGCTGACTGCTTCTAATACGGAAGGGAAGAGCTGTCC
GAGTGAAGTCCTGGTTTGTACAACCAGCCCCGACAGACCTGGACCTCCCACCAGACCCCTCCTC
AAAGGACCCGTCACGTCGCATGGCTTCAGTGTCAAGTGGGATGCTCCAAAGGACAACGGTGGCT
CAGAAATCCTGAAGTATCTGCTGGAGATCACGGACGGTGCTTCTGAAGCTGGTCAGTGGGAAGT
GGCCTACAGTGGATCAGCTACAGAGTATGTCTTTACCCATTTGAAACCAGGCACTTTGTACAAA
CTGCGAGCATGCTGCATCGGTACCGGTGGGCACAGTCAGTGCTCTGAAAGTCTCCCTGTTCGCA
CACTAAGCCTTGCACCAGGTCAGTGCCGACCACCGAGGGTTTTGGGTAGACCAAAGCACAAAGA
AGTCCACTTAGAGTGGGATGTGCCTGCGTCTGAAGGTGGCTGCGAGGTCTCAGAGTACAGTGTA
GAAATGACGGAACCTGAGGAGGTAGCCTCAGAGGTGTACCACGGGCCCGAGCTGGAGTGCACCG
TTGGCAACCTGCTTCCCGGGACGGTGTACCGCTTCAGAGTGCGGGCTCTGAATGACGGAGGGTA
TGGTCCCTACTCTGATGTGTCAGAGATCACCACTGCCGCAGGACCGCCTGGGCAGTGCAGGGCA
CCGTGTGTTTCCTTCACGCCTGATGGATGCGTCCTGGTGGGTTGGGAGAGCCCTGAAAGCCCTG
GTGCTGACATCTCCGAGTTCAGGTTGGAGTGGGGAGAAGACGAGGAATCCTTAGAACTCATTTA
TCACGGGCCAGACACCTGCTTTGAGATCCGAGATCTGTTGCCTGCTGCACAGTATTGCTGCAGA
CTCCAGGCCTTCAATCCAGCAGGCGCAGGGCCATATAGTGAGCTCGTCCACTGCCAGACACCAG
CCTCTGCCCCCGACCCTGTCTCCACTCTGTGTGTCCTGGAGGAGGAGCCCCTCAGTGCCCACCT
GGACTCACCCTCTGTGTGCCTTGTACTGACCTGGGAAGAGCCGTGCAGTAATGGATCTGAAATC
ATTGCTTACAACATTGATCTGGGAGACACCTGCATTACTGTGGGCAATACTACCACACATGTGT
TGAAGAACCTCCTTCCCGAAACTACATACCGGATCAGAATTCAGGCTGTCAATGATATTGGAGA
TGGACCGTTTAGTCAGTTCATCAAAGCAAAGACTCGGCCATTACCACCCTCGCCTCCTAGGCTG
GAGTGTGCTGCGTCTGGTCCTCAGAGCCTGAAGCTCAAGTGGGGAGACAGTAACTCTAAGATAC
ATGCTGCTCATGACATGGTGTACACCCTGCAGTTGGAAGACAGGAACAAGAGGTTTATCTCAAT
CTACCGAGGACCCAGCCACACCTACAAGGTCCAGAGACTGACAGAGTTTACCTGCTACTCCTTC
AGGATCCAGGCAACCAGCGAGGCAGGGGAGGGGCCTTTCTCAGACACCTACACCTTCAGTACAA
CCAAAAGTGTCCCTCCCACCCTCAAAGCACCTCGAGTGACGCAGTTGGAAGGAAATTCCTGTGA
AATCTTCTGGGAGACGGTACCACCGATGAAGGGCGACCCTGTGAACTACGTTCTGCAGGTGTTG
GTTGGAAGAGAATCTGAATACAAGCAGGTGTACAAGGGAGAAGAAGCCACATTCCAAATCTCAG
GCCTGCAGAGCAACACAGATTACAGGTTCCGCGTGTGTGCCTGCCGCCGCTGTGTGGACACGTC
TCAGGAGCTCAGCGGCGCTTTCAGCCCCTCTGCGGCTTTCGTGTTACAACAGCGTGAGGTCTTG
CTTACGGGGGACCTGGGAGGCATGGACGATGCCAAGATGAAGGGCGTGATGCCTACCGATGAAC
AGTTTGCCGCCCTCATTGTGCTTGGCTTCGCAACCCTGTCCATCTTGTTTGCCTTTATATTACA
GTACTTCCTAATGAAGTAAATCCAGCGACCAGAGGGATGCGCCGAATGCCGCACACTTTAATAC
ACATTTACTCAGAGCCTCCCTTTTTACGCTGTTTCATTCTTTGATTTATATACTTTTCTTGTTT
TACACAGTTAGCTAGGGGAAACAGTGTTTGGCTGCACCTATTTGAGATGCAAAACTAGGAAGAG
GTTAAACTGGATTTTTTTAATAATAAATAAAGTAATAAATAAGAAGAGAAGGAAGCAGCGGGCC
AGCAGCAGACACCGAGGGCCAATTTTCCAGCTTCCAGTCTGCTTCTAGTCTGTTTCCACTGATG
CCTTTTGCAAGCCTGTGATCTTTTCGTGTGTTACAGTTCTGTCATTTATATCCACGGTCATTTC
TTGGTCATCTGTAGCTGTAAACAGAATCACAGTGTGTGTAGTTCAGGGCTGGGGTTCCGGTGTT
ATCAGAGTATTGTCACATGAGAACATACAGTGTGCCTTCGGAGGAGGCCACCTAGACCATCCTT
ACGTCATTCAGTTTCGTAACTGTTAGCTCACCTAAGTCAAGCCGTGTACTCTAATCTGAAATGT
TTTACTACGCTGTATCCCTTATGATTTTAACACTATGAGTTGCCTGTCTAAGAAATCACATAAC
CAAGTGCACCTATAAATGATGGAGCATTGTAGACTTACACGTCGGTCCATAGCAGTAACTTTAA
GAGGGCATTGTGCAATAGTTAGTTGTTTCCTCATTGGCTACTTTAAGAGCTGCTTTAACCTGTC
TGTCTGTCTTTGTATATAACTACTTCTAATATAATCACTAGAGTTATTATATTCTGTTATGTCT
GACCGGAATTATGTGACGAGAGCTCATGGCAGTTGTGAGCTGTCTCCTTACATGTTGGCCCATG
GTATTTGAAAGACTTGCCTTTGGCTGTTCTTCGGGGTGTCAGTGACGTGAATGAAGGTCAATAC
AGCATTTCAGTGCCCACAATACTAGAGTGGCAGTGGATAAGAATCTGACTGATAAAGCCCACAC
AAGGGAACCATTTGCATTTGTCCTTCTGTTTTTGGGGCTTGATCTGGCCGCATGTGGAGAAGGA
GTGGTAACTGGCTGTGAGCATGGGGTGATGGAGGGCCAACTAGCCTACTAGATTCTCTCCCTGG
ATCTGTCACTAATTTGCTTTGTGACCTCTCTGTGCCTGTTTTCTCGTGCATGAGAAATCAAATC
AAATGGGGATTCGATACCTGTAAGTGCTACAAGGCCTTGGACCCACCGGTGCTGTGTGAGTGCG
GAGAACCACTCTCATGTATTCACTTAGAGTCATGAGGTAATCAGTTCTAACCCAAAGTCATTGG
ATTCCCCAACCAAGTCCACAGTGTTCAAGTACCTCAGGGACACTTAAAGAGTTGGAGGTGCAAC
TGTATTCCAAAAGGGTGCAGCAGACACAGCCGAGCCCCTCTTCCTGGTGTTCTGTATATTTTTG
CTCCTTGGTTTTTCTTGATCATAGCTGTTTTGTGCTTGGTCTGTGTTGTCTATGATGCAGTAAG
TACCCTGTACTAGCTTATAATATTCCCATACCAAAGTCATGGGGAAACCAACATTATTGTGTTT
TGGGTTTATTTATACTATATTCTGCATACAGTACTTTAAATGCCAATTACAGTGCAATCTTTAT
TTATTGTAAATTTTTTAAATGTACTTATGTACTAATTTGCCCTCCTAGCATGTTATATTTTGTG
TGTTTTATACTTTTGTAATTTTAGGTCAGTTTAGTTCCTTGGCAACATCTGTAGCTAGTATTAG
CTTTCTGACATTTTCTTGTGTTTTTAAAGATAAGACCATCTAACTCATTAAATGCCAAAAAAAA
AAAAATCCATTATCAGTGATTGAAAGGTTTACATGTACCAAGAAACCATATTCATCTCCTAGAA
GAGTGCTAAGATCAATGCATTGTTTCGTGCCTATATTGATATAGCTATGTACTAGAGTTCTGTA
TTTTGTTATTGACTATGATAATTAGTGTGATTAGACTTGTACACTGATGGTATCAAGGTAAATA
TATTTTTGCCAAAGCTCTGGCCTTCGGAAGCTCTTCCTTTCATCCAAGTGTGTCGTTCAACCCA
CTGTGACGTCATATCCACATTCCCTGAGACGGTCGCAAGTGGGTGAAGGCAAATTCAGTGGAAT
AATTTTTAAAGCTATTCACAGGGAGAGTCTTTTTTTAAACAAAAACACTTCAGCACTACTGCTG
TAAAGAATTCCCTGAATTGATTGAATTGTTGTAAAGGAAATTATACTTCAGGCCAAAATCTCTT
TAATCTTCCAGAGATTTCAAAGCTCTGTTACCAGCAGGAAGCGGAAGCGTGTGACACACGAGCA
GACAGCACTTTATTCTATTGCTCTCCATTATTTGGTATTCACTATAGTCTCTTCGGTCGGGAAG
TCACTCCTCTACGTGGCACTCTCCTCTATCACAGATCTGTATATGTGCTATGGATATATAACTA
TATATATATTGCCATTACAAAGGAACAATACAATAAAGTGTTCTATTGACCTTCTCTGTGCCCT
TTGCCGTACGTAGGAATGAGTGAATGGCTTTCTATTGGCCTTCTCTGTGCCCTTTGCCGTACGT
AGGAATGAGTGAATGGCTTTCTGATGCCCTGATGCTTCTCTGTACATCAACTGCATCCCTGACA
CAAGAAATTCCAGTCACCTGAAGCAAACTGCCCTCTGTCCTCAAAGAAAATGTTCACAAAGAAA
ACTTTTTTAAAAGGCTATTTTGCATATTATCTGCCTTGTTCTTATCACACTTGAGATGTTGGCA
TTTTCTGACCCTGTCTCTTTGGCTACAGTCATTCAGTATTTGTGTCAAATTTGACAAGTGCCCT
AATAGAATGTGTTTGAATGTTATCCTTGCACAATTCTTTAAATTGAAAGACAAAATGTTTTACC
TCACTGTTGGACATACATTCCAAGCTTTTCAACTTTAGGAGAAAAAAAAATAATCATATGTTTC
CTGTCTTGTAAATTTTAGATTATTTCATATACATTGTATTAAAACTGCCATATCAATTTTAATG
TATAGATTTTGCAAATACTATGCTATATGTAATACCTAACTGTATCTGTAGTGTATATGTAATA
TATTTATGCCCAATAAATGTTTTAATTCTTTCTGA

hide sequence

RefSeq Acc Id:

XM_006232216 ⟹ XP_006232278

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	110,311,439 - 110,616,761 (-)	NCBI
Rnor_6.0	2	113,109,949 - 113,414,397 (-)	NCBI
Rnor_5.0	2	132,827,872 - 133,131,057 (-)	NCBI

Sequence:

show sequence

GGCGACTGCAGGCTCGGGCGGGGGATCGGGGCGCGGCGGGAAGCAGAGGACGACCCGGTGCGTG
TGGGCCAGCGGAGCGCGGGTAGCGTGTTGAGGGCAATTCTCCATGAATGTACGTCACCATGATG
ATGACCGACCAGATCCCCCTGGAACTGCCACCCCTGCTCAATGGGGAGGTGGCCATGATGCCCC
ACTTGGTGAACGGAGAAGCAGCTCAGCAGGTCATTCTTGTCCAAGTCAACCCAGGTGAGACCTT
TACAATCAGAGCCGAGGATGGGACACTTCAGTGCATCCAAGGACCTGCCGAAGTCCCCATGATG
TCACCCAATGGGTCCATCCCTCCTATCCATGTGCCCCCAGGTTACATCTCACAGGTGATTGAAG
ACAGCACCGGAGTCCGCCGGGTGGTGGTCACACCGCAGTCTCCCGAGTGTTACCCACCGAGCTA
CCCCTCAGCCATGTCTCCAACCCATCACCTGCCCCCTTATCTGACCCACCATCCACACTTCATC
CAGAACTCGCACACCGCCTACTACCCGCCTGTCACCGTGCCTGGAGATATGCCACCCCAGTTTT
TCCCCCAGCCTCACCTTCCTCCCACAATATATAGTGAGCAAGAAATCATCCCTCTGTATGGAAT
GTCGAGCTACATCACCCGAGAAGACCAGTACAGCAAACCACCACACAAGAAACTGAAGGACCGC
CAGATTGACCGCCAGAATCGCCTCAACAGCCCGCCTTCCACCATCTACAAGAACAGCTGTGCCA
CCATGTACAACGGCTATGGGAAGGGCCACAGTGGAGGCAGCAGTGGAGGTGGGGGAGGTGGCAG
CGGTGGCGGACCTGGGATCAAGAAGACAGAGCGAAGAGCAAGAAGCAGCCCCAAATCCAGTGAT
TCTGACTTGCAAGAGTATGAGTTGGAAGTAAGGAGGGTGCAGGACATCCTTTCGGGAATAGAGA
AACCACAGGTGTCTAATATCCAGGCAAGAGCAGTGGTGCTATCTTGGGCACCCCCTGTCGGACT
GCCCTGTGGACCCCATGGTGGTCTTTCCTTCCCTTACAGCTATGAGGTTGCTTTATCTGACAAA
GGGCGAGATGGGAAATACAAGATCATTTACAGTGGAGAAGAATTGGAGTGTAACCTGAAAGACC
TCAGGCCTGCCACGGATTACCACGTGAGGGTATACGCCATGTACAATTCTGTCAAGGGATCCTG
CTCCGAGCCAGTCAGCTTCACCACCCACAGCTGCGCACCAGAATGTCCCTTCCCTCCCAAGCTG
GCACACAGGAGCAAAAGTTCACTAACCTTGCAGTGGAAGGCTCCAATTGACAATGGTTCAAAAA
TCACCAGCTACCTTTTAGAATGGGATGAGGGAAAGAGGAACAGTGGATTCAGACAGTGTTTCTT
TGGGGGCCAGAAGCACTGCAAGTTGACCAAGCTGTGTCCAGCCATGGGCTACACATTCAGGCTC
GCTGCTCGGAATGACATCGGCACCAGTGGTTACAGCCAGGAGGTCGTGTGCTACACATTGGGAA
ACATCCCCCAGATGCCTTCAGCACCCCGGCTGGTCCGAGCTGGCGTCACCTGGATCACACTGCA
GTGGAGCAGGCCGGAAGGCTGCTCGCCTGAGGAAGTGATTACCTACACCCTGGACATTCAGGAG
GACGAGAACGATAACCATTTCCACCCAAGATACACTGGAGAGGACCTAACCTGTACTGTGAAAA
ACCTCAAGCGCAGCACACAGTATAAATTCAGGCTGACTGCTTCTAATACGGAAGGGAAGAGCTG
TCCGAGTGAAGTCCTGGTTTGTACAACCAGCCCCGACAGACCTGGACCTCCCACCAGACCCCTC
CTCAAAGGACCCGTCACGTCGCATGGCTTCAGTGTCAAGTGGGATGCTCCAAAGGACAACGGTG
GCTCAGAAATCCTGAAGTATCTGCTGGAGATCACGGACGGTGCTTCTGAAGCTGGTCAGTGGGA
AGTGGCCTACAGTGGATCAGCTACAGAGTATGTCTTTACCCATTTGAAACCAGGCACTTTGTAC
AAACTGCGAGCATGCTGCATCGGTACCGGTGGGCACAGTCAGTGCTCTGAAAGTCTCCCTGTTC
GCACACTAAGCCTTGCACCAGGTCAGTGCCGACCACCGAGGGTTTTGGGTAGACCAAAGCACAA
AGAAGTCCACTTAGAGTGGGATGTGCCTGCGTCTGAAGGTGGCTGCGAGGTCTCAGAGTACAGT
GTAGAAATGACGGAACCTGAGGAGGTAGCCTCAGAGGTGTACCACGGGCCCGAGCTGGAGTGCA
CCGTTGGCAACCTGCTTCCCGGGACGGTGTACCGCTTCAGAGTGCGGGCTCTGAATGACGGAGG
GTATGGTCCCTACTCTGATGTGTCAGAGATCACCACTGCCGCAGGACCGCCTGGGCAGTGCAGG
GCACCGTGTGTTTCCTTCACGCCTGATGGATGCGTCCTGGTGGGTTGGGAGAGCCCTGAAAGCC
CTGGTGCTGACATCTCCGAGTTCAGGTTGGAGTGGGGAGAAGACGAGGAATCCTTAGAACTCAT
TTATCACGGGCCAGACACCTGCTTTGAGATCCGAGATCTGTTGCCTGCTGCACAGTATTGCTGC
AGACTCCAGGCCTTCAATCCAGCAGGCGCAGGGCCATATAGTGAGCTCGTCCACTGCCAGACAC
CAGCCTCTGCCCCCGACCCTGTCTCCACTCTGTGTGTCCTGGAGGAGGAGCCCCTCAGTGCCCA
CCTGGACTCACCCTCTGTGTGCCTTGTACTGACCTGGGAAGAGCCGTGCAGTAATGGATCTGAA
ATCATTGCTTACAACATTGATCTGGGAGACACCTGCATTACTGTGGGCAATACTACCACACATG
TGTTGAAGAACCTCCTTCCCGAAACTACATACCGGATCAGAATTCAGGCTGTCAATGATATTGG
AGATGGACCGTTTAGTCAGTTCATCAAAGCAAAGACTCGGCCATTACCACCCTCGCCTCCTAGG
CTGGAGTGTGCTGCGTCTGGTCCTCAGAGCCTGAAGCTCAAGTGGGGAGACAGTAACTCTAAGA
TACATGCTGCTCATGACATGGTGTACACCCTGCAGTTGGAAGACAGGAACAAGAGGTTTATCTC
AATCTACCGAGGACCCAGCCACACCTACAAGGTCCAGAGACTGACAGAGTTTACCTGCTACTCC
TTCAGGATCCAGGCAACCAGCGAGGCAGGGGAGGGGCCTTTCTCAGACACCTACACCTTCAGTA
CAACCAAAAGTGTCCCTCCCACCCTCAAAGCACCTCGAGTGACGCAGTTGGAAGGAAATTCCTG
TGAAATCTTCTGGGAGACGGTACCACCGATGAAGGGCGACCCTGTGAACTACGTTCTGCAGGTG
TTGGTTGGAAGAGAATCTGAATACAAGCAGGTGTACAAGGGAGAAGAAGCCACATTCCAAATCT
CAGGCCTGCAGAGCAACACAGATTACAGGTTCCGCGTGTGTGCCTGCCGCCGCTGTGTGGACAC
GTCTCAGGAGCTCAGCGGCGCTTTCAGCCCCTCTGCGGCTTTCGTGTTACAACAGCGTGAGGTC
TTGCTTACGGGGGACCTGGGAGGCATGGACGATGCCAAGATGAAGGGCGTGATGCCTACCGATG
AACAGTTTGCCGCCCTCATTGTGCTTGGCTTCGCAACCCTGTCCATCTTGTTTGCCTTTATATT
ACAGTACTTCCTAATGAAGTAAATCCAGCGACCAGAGGGATGCGCCGAATGCCGCACACTTTAA
TACACATTTACTCAGAGCCTCCCTTTTTACGCTGTTTCATTCTTTGATTTATATACTTTTCTTG
TTTTACACAGTTAGCTAGGGGAAACAGTGTTTGGCTGCACCTATTTGAGATGCAAAACTAGGAA
GAGGTTAAACTGGATTTTTTTAATAATAAATAAAGTAATAAATAAGAAGAGAAGGAAGCAGCGG
GCCAGCAGCAGACACCGAGGGCCAATTTTCCAGCTTCCAGTCTGCTTCTAGTCTGTTTCCACTG
ATGCCTTTTGCAAGCCTGTGATCTTTTCGTGTGTTACAGTTCTGTCATTTATATCCACGGTCAT
TTCTTGGTCATCTGTAGCTGTAAACAGAATCACAGTGTGTGTAGTTCAGGGCTGGGGTTCCGGT
GTTATCAGAGTATTGTCACATGAGAACATACAGTGTGCCTTCGGAGGAGGCCACCTAGACCATC
CTTACGTCATTCAGTTTCGTAACTGTTAGCTCACCTAAGTCAAGCCGTGTACTCTAATCTGAAA
TGTTTTACTACGCTGTATCCCTTATGATTTTAACACTATGAGTTGCCTGTCTAAGAAATCACAT
AACCAAGTGCACCTATAAATGATGGAGCATTGTAGACTTACACGTCGGTCCATAGCAGTAACTT
TAAGAGGGCATTGTGCAATAGTTAGTTGTTTCCTCATTGGCTACTTTAAGAGCTGCTTTAACCT
GTCTGTCTGTCTTTGTATATAACTACTTCTAATATAATCACTAGAGTTATTATATTCTGTTATG
TCTGACCGGAATTATGTGACGAGAGCTCATGGCAGTTGTGAGCTGTCTCCTTACATGTTGGCCC
ATGGTATTTGAAAGACTTGCCTTTGGCTGTTCTTCGGGGTGTCAGTGACGTGAATGAAGGTCAA
TACAGCATTTCAGTGCCCACAATACTAGAGTGGCAGTGGATAAGAATCTGACTGATAAAGCCCA
CACAAGGGAACCATTTGCATTTGTCCTTCTGTTTTTGGGGCTTGATCTGGCCGCATGTGGAGAA
GGAGTGGTAACTGGCTGTGAGCATGGGGTGATGGAGGGCCAACTAGCCTACTAGATTCTCTCCC
TGGATCTGTCACTAATTTGCTTTGTGACCTCTCTGTGCCTGTTTTCTCGTGCATGAGAAATCAA
ATCAAATGGGGATTCGATACCTGTAAGTGCTACAAGGCCTTGGACCCACCGGTGCTGTGTGAGT
GCGGAGAACCACTCTCATGTATTCACTTAGAGTCATGAGGTAATCAGTTCTAACCCAAAGTCAT
TGGATTCCCCAACCAAGTCCACAGTGTTCAAGTACCTCAGGGACACTTAAAGAGTTGGAGGTGC
AACTGTATTCCAAAAGGGTGCAGCAGACACAGCCGAGCCCCTCTTCCTGGTGTTCTGTATATTT
TTGCTCCTTGGTTTTTCTTGATCATAGCTGTTTTGTGCTTGGTCTGTGTTGTCTATGATGCAGT
AAGTACCCTGTACTAGCTTATAATATTCCCATACCAAAGTCATGGGGAAACCAACATTATTGTG
TTTTGGGTTTATTTATACTATATTCTGCATACAGTACTTTAAATGCCAATTACAGTGCAATCTT
TATTTATTGTAAATTTTTTAAATGTACTTATGTACTAATTTGCCCTCCTAGCATGTTATATTTT
GTGTGTTTTATACTTTTGTAATTTTAGGTCAGTTTAGTTCCTTGGCAACATCTGTAGCTAGTAT
TAGCTTTCTGACATTTTCTTGTGTTTTTAAAGATAAGACCATCTAACTCATTAAATGCCAAAAA
AAAAAAAATCCATTATCAGTGATTGAAAGGTTTACATGTACCAAGAAACCATATTCATCTCCTA
GAAGAGTGCTAAGATCAATGCATTGTTTCGTGCCTATATTGATATAGCTATGTACTAGAGTTCT
GTATTTTGTTATTGACTATGATAATTAGTGTGATTAGACTTGTACACTGATGGTATCAAGGTAA
ATATATTTTTGCCAAAGCTCTGGCCTTCGGAAGCTCTTCCTTTCATCCAAGTGTGTCGTTCAAC
CCACTGTGACGTCATATCCACATTCCCTGAGACGGTCGCAAGTGGGTGAAGGCAAATTCAGTGG
AATAATTTTTAAAGCTATTCACAGGGAGAGTCTTTTTTTAAACAAAAACACTTCAGCACTACTG
CTGTAAAGAATTCCCTGAATTGATTGAATTGTTGTAAAGGAAATTATACTTCAGGCCAAAATCT
CTTTAATCTTCCAGAGATTTCAAAGCTCTGTTACCAGCAGGAAGCGGAAGCGTGTGACACACGA
GCAGACAGCACTTTATTCTATTGCTCTCCATTATTTGGTATTCACTATAGTCTCTTCGGTCGGG
AAGTCACTCCTCTACGTGGCACTCTCCTCTATCACAGATCTGTATATGTGCTATGGATATATAA
CTATATATATATTGCCATTACAAAGGAACAATACAATAAAGTGTTCTATTGACCTTCTCTGTGC
CCTTTGCCGTACGTAGGAATGAGTGAATGGCTTTCTATTGGCCTTCTCTGTGCCCTTTGCCGTA
CGTAGGAATGAGTGAATGGCTTTCTGATGCCCTGATGCTTCTCTGTACATCAACTGCATCCCTG
ACACAAGAAATTCCAGTCACCTGAAGCAAACTGCCCTCTGTCCTCAAAGAAAATGTTCACAAAG
AAAACTTTTTTAAAAGGCTATTTTGCATATTATCTGCCTTGTTCTTATCACACTTGAGATGTTG
GCATTTTCTGACCCTGTCTCTTTGGCTACAGTCATTCAGTATTTGTGTCAAATTTGACAAGTGC
CCTAATAGAATGTGTTTGAATGTTATCCTTGCACAATTCTTTAAATTGAAAGACAAAATGTTTT
ACCTCACTGTTGGACATACATTCCAAGCTTTTCAACTTTAGGAGAAAAAAAAATAATCATATGT
TTCCTGTCTTGTAAATTTTAGATTATTTCATATACATTGTATTAAAACTGCCATATCAATTTTA
ATGTATAGATTTTGCAAATACTATGCTATATGTAATACCTAACTGTATCTGTAGTGTATATGTA
ATATATTTATGCCCAATAAATGTTTTAATTCTTTCTGA

hide sequence

RefSeq Acc Id:

XM_039101977 ⟹ XP_038957905

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	110,311,439 - 110,616,761 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001178633	(Get FASTA)	NCBI Sequence Viewer
	XP_006232277	(Get FASTA)	NCBI Sequence Viewer
	XP_006232278	(Get FASTA)	NCBI Sequence Viewer
	XP_038957905	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001178633 ⟸ NM_001191704

- UniProtKB:

D4A0W7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MYVTMMMTDQIPLELPPLLNGEVAMMPHLVNGEAAQQVILVQVNPGETFTIRAEDGTLQCIQGP
AEVPMMSPNGSIPPIHVPPGYISQVIEDSTGVRRVVVTPQSPECYPPSYPSAMSPTHHLPPYLT
HHPHFIQNSHTAYYPPVTVPGDMPPQFFPQPHLPPTIYSEQEIIPLYGMSSYITREDQYSKPPH
KKLKDRQIDRQNRLNSPPSTIYKNSCATMYNGYGKGHSGGSSGGGGGGSGGGPGIKKTERRARS
SPKSSDSDLQEYELEVRRVQDILSGIEKPQVSNIQARAVVLSWAPPVGLPCGPHGGLSFPYSYE
VALSDKGRDGKYKIIYSGEELECNLKDLRPATDYHVRVYAMYNSVKGSCSEPVSFTTHSCAPEC
PFPPKLAHRSKSSLTLQWKAPIDNGSKITSYLLEWDEGKRNSGFRQCFFGGQKHCKLTKLCPAM
GYTFRLAARNDIGTSGYSQEVVCYTLGNIPQMPSAPRLVRAGVTWITLQWSRPEGCSPEEVITY
TLDIQEDENDNHFHPRYTGEDLTCTVKNLKRSTQYKFRLTASNTEGKSCPSEVLVCTTSPDRPG
PPTRPLLKGPVTSHGFSVKWDAPKDNGGSEILKYLLEITDGASEAGQWEVAYSGSATEYVFTHL
KPGTLYKLRACCIGTGGHSQCSESLPVRTLSLAPGQCRPPRVLGRPKHKEVHLEWDVPASEGGC
EVSEYSVEMTEPEEVASEVYHGPELECTVGNLLPGTVYRFRVRALNDGGYGPYSDVSEITTAAG
PPGQCRAPCVSFTPDGCVLVGWESPESPGADISEFRLEWGEDEESLELIYHGPDTCFEIRDLLP
AAQYCCRLQAFNPAGAGPYSELVHCQTPASAPDPVSTLCVLEEEPLSAHLDSPSVCLVLTWEEP
CSNGSEIIAYNIDLGDTCITVGNTTTHVLKNLLPETTYRIRIQAVNDIGDGPFSQFIKAKTRPL
PPSPPRLECAASGPQSLKLKWGDSNSKIHAAHDMVYTLQLEDRNKRFISIYRGPSHTYKVQRLT
EFTCYSFRIQATSEAGEGPFSDTYTFSTTKSVPPTLKAPRVTQLEGNSCEIFWETVPPMKGDPV
NYVLQVLVGRESEYKQVYKGEEATFQISGLQSNTDYRFRVCACRRCVDTSQELSGAFSPSAAFV
LQQREVLLTGDLGGMDDAKMKGVMPTDEQFAALIVLGFATLSILFAFILQYFLMK

hide sequence

RefSeq Acc Id:	XP_006232277 ⟸ XM_006232215
- Peptide Label:	isoform X1
- UniProtKB:	D4A0W7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYVTMMMTDQIPLELPPLLNGEVAMMPHLVNGEAAQQVILVQVNPGETFTIRAEDGTLQCIQGP AEVPMMSPNGSIPPIHVPPGYISQVIEDSTGVRRVVVTPQSPECYPPSYPSAMSPTHHLPPYLT HHPHFIQNSHTAYYPPVTVPGDMPPQFFPQPHLPPTIYSEQEIIPLYGMSSYITREDQYSKPPH KKLKDRQIDRQNRLNSPPSTIYKNSCATMYNGYGKGHSGGSSGGGGGGSGGGPGIKKTERRARS SPKSSDSDLQEYELEVRRVQDILSGIEKPQVSNIQARAVVLSWAPPVGLPCGPHGGLSFPYSYE VALSDKGRDGKYKIIYSGEELECNLKDLRPATDYHVRVYAMYNSVKGSCSEPVSFTTHSCAPEC PFPPKLAHRSKSSLTLQWKAPIDNGSKITSYLLEWDEGKRNSGFRQCFFGGQKHCKLTKLCPAM GYTFRLAARNDIGTSGYSQEVVCYTLGNIPQMPSAPRLVRAGVTWITLQWSRPEGCSPEEVITY TLDIQEDENDNHFHPRYTGEDLTCTVKNLKRSTQYKFRLTASNTEGKSCPSEVLVCTTSPDRPG PPTRPLLKGPVTSHGFSVKWDAPKDNGGSEILKYLLEITDGASEAGQWEVAYSGSATEYVFTHL KPGTLYKLRACCIGTGGHSQCSESLPVRTLSLAPGQCRPPRVLGRPKHKEVHLEWDVPASEGGC EVSEYSVEMTEPEEVASEVYHGPELECTVGNLLPGTVYRFRVRALNDGGYGPYSDVSEITTAAG PPGQCRAPCVSFTPDGCVLVGWESPESPGADISEFRLEWGEDEESLELIYHGPDTCFEIRDLLP AAQYCCRLQAFNPAGAGPYSELVHCQTPASAPDPVSTLCVLEEEPLSAHLDSPSVCLVLTWEEP CSNGSEIIAYNIDLGDTCITVGNTTTHVLKNLLPETTYRIRIQAVNDIGDGPFSQFIKAKTRPL PPSPPRLECAASGPQSLKLKWGDSNSKIHAAHDMVYTLQLEDRNKRFISIYRGPSHTYKVQRLT EFTCYSFRIQATSEAGEGPFSDTYTFSTTKSVPPTLKAPRVTQLEGNSCEIFWETVPPMKGDPV NYVLQVLVGRESEYKQVYKGEEATFQISGLQSNTDYRFRVCACRRCVDTSQELSGAFSPSAAFV LQQREVLLTGDLGGMDDAKMKGVMPTDEQFAALIVLGFATLSILFAFILQYFLMK hide sequence

RefSeq Acc Id:	XP_006232278 ⟸ XM_006232216
- Peptide Label:	isoform X1
- UniProtKB:	D4A0W7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYVTMMMTDQIPLELPPLLNGEVAMMPHLVNGEAAQQVILVQVNPGETFTIRAEDGTLQCIQGP AEVPMMSPNGSIPPIHVPPGYISQVIEDSTGVRRVVVTPQSPECYPPSYPSAMSPTHHLPPYLT HHPHFIQNSHTAYYPPVTVPGDMPPQFFPQPHLPPTIYSEQEIIPLYGMSSYITREDQYSKPPH KKLKDRQIDRQNRLNSPPSTIYKNSCATMYNGYGKGHSGGSSGGGGGGSGGGPGIKKTERRARS SPKSSDSDLQEYELEVRRVQDILSGIEKPQVSNIQARAVVLSWAPPVGLPCGPHGGLSFPYSYE VALSDKGRDGKYKIIYSGEELECNLKDLRPATDYHVRVYAMYNSVKGSCSEPVSFTTHSCAPEC PFPPKLAHRSKSSLTLQWKAPIDNGSKITSYLLEWDEGKRNSGFRQCFFGGQKHCKLTKLCPAM GYTFRLAARNDIGTSGYSQEVVCYTLGNIPQMPSAPRLVRAGVTWITLQWSRPEGCSPEEVITY TLDIQEDENDNHFHPRYTGEDLTCTVKNLKRSTQYKFRLTASNTEGKSCPSEVLVCTTSPDRPG PPTRPLLKGPVTSHGFSVKWDAPKDNGGSEILKYLLEITDGASEAGQWEVAYSGSATEYVFTHL KPGTLYKLRACCIGTGGHSQCSESLPVRTLSLAPGQCRPPRVLGRPKHKEVHLEWDVPASEGGC EVSEYSVEMTEPEEVASEVYHGPELECTVGNLLPGTVYRFRVRALNDGGYGPYSDVSEITTAAG PPGQCRAPCVSFTPDGCVLVGWESPESPGADISEFRLEWGEDEESLELIYHGPDTCFEIRDLLP AAQYCCRLQAFNPAGAGPYSELVHCQTPASAPDPVSTLCVLEEEPLSAHLDSPSVCLVLTWEEP CSNGSEIIAYNIDLGDTCITVGNTTTHVLKNLLPETTYRIRIQAVNDIGDGPFSQFIKAKTRPL PPSPPRLECAASGPQSLKLKWGDSNSKIHAAHDMVYTLQLEDRNKRFISIYRGPSHTYKVQRLT EFTCYSFRIQATSEAGEGPFSDTYTFSTTKSVPPTLKAPRVTQLEGNSCEIFWETVPPMKGDPV NYVLQVLVGRESEYKQVYKGEEATFQISGLQSNTDYRFRVCACRRCVDTSQELSGAFSPSAAFV LQQREVLLTGDLGGMDDAKMKGVMPTDEQFAALIVLGFATLSILFAFILQYFLMK hide sequence

RefSeq Acc Id:

ENSRNOP00000038770 ⟸ ENSRNOT00000034096

RefSeq Acc Id:	XP_038957905 ⟸ XM_039101977
- Peptide Label:	isoform X1
- UniProtKB:	D4A0W7 (UniProtKB/TrEMBL)

Protein Domains

Fibronectin type-III

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A0W7-F1-model_v2	AlphaFold	D4A0W7	1-1207	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311673	AgrOrtholog
BioCyc Gene	G2FUF-53505	BioCyc
Ensembl Genes	ENSRNOG00000024089	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000038770	ENTREZGENE
	ENSRNOP00000038770.5	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000034096	ENTREZGENE
	ENSRNOT00000034096.7	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	FN3_sf	UniProtKB/TrEMBL
	FN_III	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
KEGG Report	rno:294925	UniProtKB/TrEMBL
NCBI Gene	294925	ENTREZGENE
PANTHER	E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED	UniProtKB/TrEMBL
	FIBRONECTIN TYPE III DOMAIN-CONTAINING PROTEIN 3B	UniProtKB/TrEMBL
Pfam	fn3	UniProtKB/TrEMBL
PhenoGen	Fndc3b	PhenoGen
PRINTS	FNTYPEIII	UniProtKB/TrEMBL
PROSITE	FN3	UniProtKB/TrEMBL
SMART	FN3	UniProtKB/TrEMBL
Superfamily-SCOP	FN_III-like	UniProtKB/TrEMBL
UniProt	D4A0W7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Fndc3b	fibronectin type III domain containing 3B	Fndc3b_predicted	fibronectin type III domain containing 3B (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Fndc3b_predicted	fibronectin type III domain containing 3B (predicted)	RGD1311673_predicted	similar to FAD104 (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-20	RGD1311673_predicted	similar to FAD104 (predicted)	LOC294925_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC294925_predicted	similar to FAD104 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD