Cryz (crystallin zeta) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Cryz (crystallin zeta) Rattus norvegicus
Analyze
Symbol: Cryz
Name: crystallin zeta
RGD ID: 1311639
Description: Enables mRNA 3'-UTR binding activity. Involved in mRNA stabilization. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Orthologous to human CRYZ (crystallin zeta); INTERACTS WITH (+)-schisandrin B; 2,2,2-tetramine; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: crystallin, zeta; crystallin, zeta (quinone reductase); LOC362061; NADPH:quinone reductase; quinone oxidoreductase; zeta-crystallin
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82246,211,707 - 246,239,472 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2246,211,156 - 246,239,470 (+)EnsemblGRCr8
mRatBN7.22243,552,037 - 243,580,369 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2243,552,119 - 243,579,758 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2251,382,444 - 251,410,059 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02249,276,271 - 249,303,886 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02244,175,870 - 244,204,081 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02260,884,315 - 260,911,827 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2260,884,337 - 260,911,792 (+)Ensemblrn6Rnor6.0
Rnor_5.02279,545,988 - 279,573,507 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42252,433,559 - 252,461,038 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2235,475,252 - 235,504,548 (+)NCBICelera
RGSC_v3.12252,448,165 - 252,475,644 (+)NCBI
Cytogenetic Map2q45NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,2,2-tetramine  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,4-dinitrotoluene  (EXP)
2,5-dihydroxybenzoic acid  (ISO)
2,6-dimethoxyphenol  (ISO)
2-hydroxypropanoic acid  (ISO)
2-methylcholine  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-methylcholanthrene  (EXP,ISO)
3H-1,2-dithiole-3-thione  (EXP,ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxynon-2-enal  (ISO)
4-nitroquinoline N-oxide  (EXP)
5-fluorouracil  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
benzatropine  (ISO)
benzo[a]pyrene  (ISO)
Benzoyl peroxide  (ISO)
beta-ionone  (ISO)
beta-naphthoflavone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
cadmium acetate  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
cannabidiol  (ISO)
carvacrol  (ISO)
CGP 52608  (ISO)
cobalt dichloride  (EXP,ISO)
copper atom  (ISO)
copper(0)  (ISO)
Cuprizon  (EXP,ISO)
cycloartenol  (ISO)
cyclosporin A  (ISO)
Dibutyl phosphate  (ISO)
dicrotophos  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
epoxiconazole  (ISO)
flutamide  (EXP)
folic acid  (ISO)
formaldehyde  (EXP)
furfural  (ISO)
gentamycin  (EXP)
glafenine  (EXP)
glyphosate  (EXP)
hydrogen peroxide  (ISO)
inulin  (ISO)
isotretinoin  (ISO)
ivermectin  (ISO)
lead(0)  (ISO)
lupeol  (ISO)
mercury atom  (ISO)
mercury(0)  (ISO)
methidathion  (ISO)
methylmercury chloride  (ISO)
Monobutylphthalate  (EXP)
N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine  (ISO)
paracetamol  (ISO)
parathion  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
picoxystrobin  (ISO)
propiconazole  (ISO)
quercetin  (ISO)
quercetin 4'-O-beta-D-glucopyranoside  (ISO)
rac-lactic acid  (ISO)
resveratrol  (EXP,ISO)
rotenone  (ISO)
sanguinarine  (EXP)
SB 431542  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
streptozocin  (EXP)
sunitinib  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (EXP,ISO)
tetrahydropalmatine  (ISO)
thapsigargin  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
triphenyl phosphate  (ISO)
valdecoxib  (EXP)
valproic acid  (ISO)
xanthohumol  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
cytosol  (IBA,ISO,ISS)
mitochondrion  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Comprehensive gene review and curation RGD comprehensive gene curation
6. pH-responsive stabilization of glutamate dehydrogenase mRNA in LLC-PK1-F+ cells. Schroeder JM, etal., Am J Physiol Renal Physiol. 2003 Aug;285(2):F258-65. Epub 2003 Apr 8.
Additional References at PubMed
PMID:12477932   PMID:15489334   PMID:17497241   PMID:19056867   PMID:20458337   PMID:23376485   PMID:23533145   PMID:34800366  


Genomics

Comparative Map Data
Cryz
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82246,211,707 - 246,239,472 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2246,211,156 - 246,239,470 (+)EnsemblGRCr8
mRatBN7.22243,552,037 - 243,580,369 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2243,552,119 - 243,579,758 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2251,382,444 - 251,410,059 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02249,276,271 - 249,303,886 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02244,175,870 - 244,204,081 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02260,884,315 - 260,911,827 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2260,884,337 - 260,911,792 (+)Ensemblrn6Rnor6.0
Rnor_5.02279,545,988 - 279,573,507 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42252,433,559 - 252,461,038 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2235,475,252 - 235,504,548 (+)NCBICelera
RGSC_v3.12252,448,165 - 252,475,644 (+)NCBI
Cytogenetic Map2q45NCBI
CRYZ
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38174,705,486 - 74,733,050 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl174,701,488 - 74,733,104 (-)Ensemblhg38GRCh38
GRCh37175,171,170 - 75,198,734 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36174,943,772 - 74,971,315 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34174,883,204 - 74,910,748NCBI
Celera173,416,409 - 73,444,324 (-)NCBICelera
Cytogenetic Map1p31.1NCBI
HuRef173,305,573 - 73,333,498 (-)NCBIHuRef
CHM1_1175,286,617 - 75,314,534 (-)NCBICHM1_1
T2T-CHM13v2.0174,547,169 - 74,574,691 (-)NCBIT2T-CHM13v2.0
Cryz
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393154,302,348 - 154,328,819 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3154,302,348 - 154,328,819 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm383154,596,711 - 154,623,182 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3154,596,711 - 154,623,182 (+)Ensemblmm10GRCm38
MGSCv373154,259,976 - 154,286,146 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv363154,532,492 - 154,558,475 (+)NCBIMGSCv36mm8
Celera3161,056,174 - 161,081,722 (+)NCBICelera
Cytogenetic Map3H4NCBI
cM Map379.25NCBI
Cryz
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542317,955,222 - 17,975,982 (+)Ensembl
ChiLan1.0NW_00495542317,952,783 - 17,975,982 (+)NCBIChiLan1.0ChiLan1.0
CRYZ
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21152,146,290 - 152,174,077 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11151,306,974 - 151,335,349 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0173,933,432 - 73,962,107 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1175,908,684 - 75,936,131 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl175,908,684 - 75,936,127 (-)EnsemblpanPan2panpan1.1
CRYZ
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1671,656,162 - 71,693,020 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl671,656,188 - 71,675,692 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha674,319,317 - 74,339,207 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0672,243,211 - 72,286,494 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl672,243,256 - 72,276,221 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1671,743,227 - 71,762,856 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0671,689,881 - 71,709,606 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0672,184,160 - 72,204,066 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Cryz
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505886,491,899 - 86,523,098 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365712,001,273 - 2,024,974 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365712,002,388 - 2,033,423 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CRYZ
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6138,435,392 - 138,460,975 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.16138,434,960 - 138,461,042 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26128,301,994 - 128,327,414 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CRYZ
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12058,427,281 - 58,456,370 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2058,435,671 - 58,456,408 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603358,998,854 - 59,027,683 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cryz
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474221,955,368 - 21,990,402 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474221,951,389 - 21,974,134 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Cryz
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v136,825,230 - 6,853,370 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Cryz
109 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:108
Count of miRNA genes:84
Interacting mature miRNAs:100
Transcripts:ENSRNOT00000032808
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631501Bp101Blood pressure QTL 1012.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2205135267250135267Rat
2307174Activ3Activity QTL 34.830.000058locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2210956252251712708Rat
1331794Bp202Blood pressure QTL 2023.66819arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2143344967251712708Rat
1298075Scl17Serum cholesterol level QTL 173.4blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)2214404877251712708Rat
1331805Cm29Cardiac mass QTL 293.50746heart mass (VT:0007028)heart wet weight (CMO:0000069)2143344967251712708Rat
2293833Kiddil8Kidney dilation QTL 82.9kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)2220274283249795005Rat
1598835Anxrr18Anxiety related response QTL 182.98body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)2203664411248664411Rat
1300126Bp175Blood pressure QTL 1753.46arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2204795005249795005Rat
7207490Bss111Bone structure and strength QTL 1116.4femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)2214404877251712708Rat
7207484Bss108Bone structure and strength QTL 1085.3femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)2214404877251712708Rat
2313073Bmd75Bone mineral density QTL 754.10.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)2218051934251712708Rat
7207482Bss107Bone structure and strength QTL 1077femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)2214404877251712708Rat
2293844Kiddil7Kidney dilation QTL 73.5kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)2220274283249795005Rat
1641891Alcrsp17Alcohol response QTL 17response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2151869660251712708Rat
2317752Glom23Glomerulus QTL 233.6urine protein amount (VT:0005160)urine protein level (CMO:0000591)2196140964251540988Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2205135267250135267Rat
1549836Bss2Bone structure and strength QTL 27.5femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)2214404877251712708Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)2205135267250135267Rat

Markers in Region
RH131206  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22243,579,419 - 243,579,616 (+)MAPPERmRatBN7.2
Rnor_6.02260,911,489 - 260,911,685NCBIRnor6.0
Rnor_5.02279,573,169 - 279,573,365UniSTSRnor5.0
RGSC_v3.42252,460,734 - 252,460,930UniSTSRGSC3.4
Celera2235,504,244 - 235,504,440UniSTS
RH 3.4 Map21630.2UniSTS
Cytogenetic Map2q45UniSTS
RH132950  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22243,578,997 - 243,579,189 (+)MAPPERmRatBN7.2
Rnor_6.02260,911,067 - 260,911,258NCBIRnor6.0
Rnor_5.02279,572,747 - 279,572,938UniSTSRnor5.0
RGSC_v3.42252,460,312 - 252,460,503UniSTSRGSC3.4
Celera2235,503,822 - 235,504,013UniSTS
RH 3.4 Map21637.8UniSTS
Cytogenetic Map2q45UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 87 59 6 351 187 11 142 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000032808   ⟹   ENSRNOP00000038188
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2246,213,853 - 246,239,470 (+)Ensembl
mRatBN7.2 Ensembl2243,552,119 - 243,579,758 (+)Ensembl
Rnor_6.0 Ensembl2260,884,337 - 260,911,792 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000117940   ⟹   ENSRNOP00000077429
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2246,215,872 - 246,239,470 (+)Ensembl
mRatBN7.2 Ensembl2243,557,442 - 243,579,758 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000124823   ⟹   ENSRNOP00000103156
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2246,211,156 - 246,239,470 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000133098   ⟹   ENSRNOP00000101967
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2246,220,183 - 246,239,470 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000170486   ⟹   ENSRNOP00000111689
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2246,216,972 - 246,239,470 (+)Ensembl
RefSeq Acc Id: NM_001012183   ⟹   NP_001012183
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82246,211,825 - 246,239,438 (+)NCBI
mRatBN7.22243,552,111 - 243,579,724 (+)NCBI
Rnor_6.02260,884,339 - 260,911,793 (+)NCBI
Rnor_5.02279,545,988 - 279,573,507 (+)NCBI
RGSC_v3.42252,433,559 - 252,461,038 (+)RGD
Celera2235,475,252 - 235,504,548 (+)RGD
Sequence:
RefSeq Acc Id: XM_006233520   ⟹   XP_006233582
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82246,211,707 - 246,239,472 (+)NCBI
mRatBN7.22243,552,038 - 243,580,369 (+)NCBI
Rnor_6.02260,884,315 - 260,911,827 (+)NCBI
Rnor_5.02279,545,988 - 279,573,507 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063282242   ⟹   XP_063138312
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82246,211,747 - 246,234,351 (+)NCBI
RefSeq Acc Id: NP_001012183   ⟸   NM_001012183
- UniProtKB: Q6AYT0 (UniProtKB/Swiss-Prot),   A6HWQ3 (UniProtKB/TrEMBL),   A0A8I5Y5T4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006233582   ⟸   XM_006233520
- Peptide Label: isoform X1
- UniProtKB: Q6AYT0 (UniProtKB/Swiss-Prot),   A6HWQ3 (UniProtKB/TrEMBL),   A0A8I5Y5T4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000038188   ⟸   ENSRNOT00000032808
Ensembl Acc Id: ENSRNOP00000077429   ⟸   ENSRNOT00000117940
RefSeq Acc Id: XP_063138312   ⟸   XM_063282242
- Peptide Label: isoform X2
Ensembl Acc Id: ENSRNOP00000111689   ⟸   ENSRNOT00000170486
Ensembl Acc Id: ENSRNOP00000103156   ⟸   ENSRNOT00000124823
Ensembl Acc Id: ENSRNOP00000101967   ⟸   ENSRNOT00000133098
Protein Domains
Enoyl reductase (ER)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6AYT0-F1-model_v2 AlphaFold Q6AYT0 1-329 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13691833
Promoter ID:EPDNEW_R2357
Type:multiple initiation site
Name:Cryz_1
Description:crystallin zeta
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02260,884,347 - 260,884,407EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311639 AgrOrtholog
BioCyc Gene G2FUF-50756 BioCyc
BioCyc Pathway PWY-7279 [aerobic respiration II (cytochrome c) (yeast)] BioCyc
BioCyc Pathway Image PWY-7279 BioCyc
Ensembl Genes ENSRNOG00000028319 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000032808.4 UniProtKB/Swiss-Prot
  ENSRNOT00000124823 ENTREZGENE
Gene3D-CATH Medium-chain alcohol dehydrogenases, catalytic domain UniProtKB/Swiss-Prot
  NAD(P)-binding Rossmann-like Domain UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7106704 IMAGE-MGC_LOAD
InterPro ADH_C UniProtKB/Swiss-Prot
  ADH_N UniProtKB/Swiss-Prot
  GroES-like_sf UniProtKB/Swiss-Prot
  NAD(P)-bd_dom_sf UniProtKB/Swiss-Prot
  PKS_ER UniProtKB/Swiss-Prot
  Quin_OxRdtase/zeta-crystal_CS UniProtKB/Swiss-Prot
  Zinc-ADH_QOR/CCCR UniProtKB/Swiss-Prot
KEGG Report rno:362061 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93718 IMAGE-MGC_LOAD
NCBI Gene 362061 ENTREZGENE
PANTHER QUINONE OXIDOREDUCTASE UniProtKB/Swiss-Prot
  QUINONE OXIDOREDUCTASE UniProtKB/Swiss-Prot
Pfam ADH_N UniProtKB/Swiss-Prot
  ADH_zinc_N UniProtKB/Swiss-Prot
PharmGKB CRYZ RGD
PhenoGen Cryz PhenoGen
PROSITE QOR_ZETA_CRYSTAL UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000028319 RatGTEx
SMART PKS_ER UniProtKB/Swiss-Prot
Superfamily-SCOP SSF50129 UniProtKB/Swiss-Prot
  SSF51735 UniProtKB/Swiss-Prot
UniProt A0A8I5Y5T4 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LK73_RAT UniProtKB/TrEMBL
  A0ABK0LYZ9_RAT UniProtKB/TrEMBL
  A6HWQ3 ENTREZGENE, UniProtKB/TrEMBL
  Q6AYT0 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-19 Cryz  crystallin zeta  Cryz  crystallin, zeta (quinone reductase)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-01-10 Cryz  crystallin, zeta (quinone reductase)  Cryz  crystallin, zeta  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Cryz  crystallin, zeta  Cryz_predicted  crystallin, zeta (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Cryz_predicted  crystallin, zeta (predicted)      Symbol and Name status set to approved 70820 APPROVED