Spef1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 138,843,679 - 138,849,762 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 118,390,659 - 118,396,842 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 118,390,575 - 118,394,531 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 122,285,004 - 122,288,862 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 130,884,350 - 130,888,228 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 128,541,107 - 128,544,963 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 123,712,907 - 123,720,787 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 123,714,564 - 123,718,432 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 130,212,953 - 130,219,185 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 118,877,343 - 118,881,211 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 118,782,916 - 118,786,719 (-) | NCBI | | | | | Celera | 3 | 117,198,821 - 117,202,689 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q36 | NCBI | | | | |
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SPEF1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 20 | 3,777,504 - 3,781,448 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 3,777,504 - 3,781,448 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 3,758,151 - 3,762,095 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 3,706,151 - 3,710,102 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 3,706,151 - 3,710,061 | NCBI | | | | | Celera | 20 | 3,820,021 - 3,823,972 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | p13 | NCBI | | | | | HuRef | 20 | 3,706,709 - 3,710,657 (-) | NCBI | | HuRef | | | CHM1_1 | 20 | 3,758,467 - 3,762,413 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 3,808,445 - 3,812,388 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Spef1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 131,012,181 - 131,016,730 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 131,012,181 - 131,029,202 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 131,170,261 - 131,174,810 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 131,170,261 - 131,187,282 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 130,995,997 - 131,000,546 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 130,995,997 - 131,000,546 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 132,394,333 - 132,398,883 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | F1 | NCBI | | | | | cM Map | 2 | 63.28 | NCBI | | | | |
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Spef1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955415 | 14,620,593 - 14,626,049 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955415 | 14,620,593 - 14,626,049 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SPEF1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 21 | 4,739,651 - 4,744,508 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 4,736,476 - 4,742,474 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 3,858,548 - 3,863,150 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 3,615,358 - 3,619,390 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 3,615,358 - 3,619,390 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SPEF1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 24 | 17,572,457 - 17,580,006 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 17,574,741 - 17,578,439 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 17,402,172 - 17,408,295 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 17,991,277 - 17,997,400 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 17,993,220 - 17,998,605 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 17,586,132 - 17,593,665 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 17,697,226 - 17,703,348 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 18,024,874 - 18,031,001 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Spef1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 166,486,052 - 166,492,305 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936485 | 14,919,913 - 14,922,995 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936485 | 14,917,352 - 14,923,669 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SPEF1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 17 | 31,934,856 - 31,938,463 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 31,934,856 - 31,938,463 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 36,264,818 - 36,271,217 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SPEF1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 2 | 34,462,933 - 34,467,575 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 34,462,896 - 34,466,923 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666071 | 9,986,035 - 9,990,693 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Spef1 (Heterocephalus glaber - naked mole-rat) |
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