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Gene: Dtwd1 (DTW domain containing 1) Rattus norvegicus

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Symbol:

Dtwd1

Name:

DTW domain containing 1

RGD ID:

1311144

Description:

Predicted to enable tRNA-uridine aminocarboxypropyltransferase activity. Predicted to be involved in tRNA modification. Predicted to be active in nucleus. Orthologous to human DTWD1 (DTW domain containing 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

DTW domain-containing protein 1; LOC296119; RGD1311144; similar to RIKEN cDNA 1810033A06; tRNA-uridine aminocarboxypropyltransferase 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DTWD1 (DTW domain containing 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Dtwd1 (DTW domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dtwd1 (DTW motif tRNA-uridine aminocarboxypropyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DTWD1 (DTW motif tRNA-uridine aminocarboxypropyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DTWD1 (DTW domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dtwd1 (DTW motif tRNA-uridine aminocarboxypropyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DTWD1 (DTW domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DTWD1 (DTW motif tRNA-uridine aminocarboxypropyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dtwd1 (DTW motif tRNA-uridine aminocarboxypropyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Dtwd1 (DTW domain containing 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	DTWD1 (DTW domain containing 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dtwd1 (DTW domain containing 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG2006	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	Y53C12A.10	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dtwd1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	133,845,768 - 133,859,965 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	133,841,935 - 133,860,316 (+)	Ensembl				GRCr8
mRatBN7.2	3	113,392,402 - 113,409,322 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	113,392,457 - 113,408,105 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	117,275,123 - 117,289,213 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	125,870,640 - 125,884,730 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	123,531,005 - 123,545,095 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	118,427,790 - 118,443,003 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	118,430,511 - 118,442,098 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	124,952,331 - 124,968,604 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	113,583,394 - 113,594,982 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	112,247,432 - 112,259,020 (+)	NCBI		Celera
RGSC_v3.1	3	113,488,966 - 113,500,554 (+)	NCBI
Cytogenetic Map	3	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bloom syndrome (ISO)

colorectal cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17alpha-ethynylestradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2-methylcholine (ISO)

5-fluorouracil (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

aflatoxin M1 (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

amitrole (EXP)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

butyric acid (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

camptothecin (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

dibutyl phthalate (EXP,ISO)

dicrotophos (ISO)

diethylstilbestrol (EXP)

dioxygen (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

ethanol (ISO)

ethyl methanesulfonate (ISO)

formaldehyde (ISO)

fulvestrant (ISO)

Garcinol (ISO)

gentamycin (EXP)

lead diacetate (ISO)

methimazole (EXP)

methyl methanesulfonate (ISO)

mono(2-ethylhexyl) phthalate (ISO)

nickel atom (ISO)

ozone (ISO)

panobinostat (ISO)

paracetamol (ISO)

pentachlorophenol (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

pomalidomide (ISO)

quercetin (ISO)

quercitrin (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

Soman (EXP)

sulfadimethoxine (EXP)

temozolomide (ISO)

thioacetamide (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

tRNA modification (IBA,IEA,ISO,ISS)

tRNA processing (IEA)

Cellular Component

nucleus (IBA,IEA,ISO,ISS)

Molecular Function

transferase activity (IEA)

tRNA-uridine aminocarboxypropyltransferase activity (IBA,IEA,ISO,ISS)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:31804502

Genomics

Comparative Map Data

Dtwd1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	133,845,768 - 133,859,965 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	133,841,935 - 133,860,316 (+)	Ensembl				GRCr8
mRatBN7.2	3	113,392,402 - 113,409,322 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	113,392,457 - 113,408,105 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	117,275,123 - 117,289,213 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	125,870,640 - 125,884,730 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	123,531,005 - 123,545,095 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	118,427,790 - 118,443,003 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	118,430,511 - 118,442,098 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	124,952,331 - 124,968,604 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	113,583,394 - 113,594,982 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	112,247,432 - 112,259,020 (+)	NCBI		Celera
RGSC_v3.1	3	113,488,966 - 113,500,554 (+)	NCBI
Cytogenetic Map	3	q36	NCBI

DTWD1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	49,621,048 - 49,656,232 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	49,621,037 - 49,656,232 (+)	Ensembl			hg38	GRCh38
GRCh37	15	49,913,245 - 49,948,429 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	47,700,575 - 47,723,154 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	15	26,806,460 - 26,830,571 (+)	NCBI		Celera
Cytogenetic Map	15	q21.2	NCBI
HuRef	15	26,744,825 - 26,768,953 (+)	NCBI		HuRef
CHM1_1	15	50,031,231 - 50,055,328 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	47,429,406 - 47,464,635 (+)	NCBI		T2T-CHM13v2.0

Dtwd1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	125,993,981 - 126,007,197 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	125,994,061 - 126,007,199 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	126,152,085 - 126,165,277 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	126,152,141 - 126,165,279 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	125,977,877 - 125,991,013 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	125,843,616 - 125,856,717 (+)	NCBI		MGSCv36	mm8
Celera	2	127,398,624 - 127,411,787 (+)	NCBI		Celera
Cytogenetic Map	2	F1	NCBI
cM Map	2	61.76	NCBI

Dtwd1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	4,548,237 - 4,568,477 (-)	Ensembl
ChiLan1.0	NW_004955409	4,550,906 - 4,568,484 (-)	NCBI	ChiLan1.0	ChiLan1.0

DTWD1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	38,870,365 - 38,906,282 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	43,054,277 - 43,089,582 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	28,578,698 - 28,602,840 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	46,902,304 - 46,926,401 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	46,902,304 - 46,926,401 (+)	Ensembl			panPan2	panpan1.1

DTWD1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	15,683,586 - 15,704,485 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	15,683,624 - 15,704,410 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	15,610,406 - 15,631,308 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	15,827,392 - 15,848,293 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	15,827,430 - 15,848,292 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	15,750,729 - 15,771,630 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	15,866,166 - 15,887,066 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	15,972,718 - 15,993,621 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Dtwd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	93,949,498 - 94,034,573 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	11,799,825 - 11,817,712 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	11,799,811 - 11,817,640 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DTWD1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	122,118,951 - 122,139,272 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	122,121,332 - 122,139,322 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	135,792,118 - 135,810,067 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DTWD1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	33,507,260 - 33,677,574 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	33,652,606 - 33,677,682 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
ChlSab1.1 Ensembl	26	33,652,606 - 33,677,682 (-)	NCBI		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023667107	2,630 - 16,601 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dtwd1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	10,338,503 - 10,356,048 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624731	10,340,001 - 10,360,918 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Dtwd1
44 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	315
Count of miRNA genes:	193
Interacting mature miRNAs:	221
Transcripts:	ENSRNOT00000012966
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2312673	Scl63	Serum cholesterol level QTL 63		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	98535255	168026850	Rat
2301414	Kidm37	Kidney mass QTL 37		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	70653097	121056321	Rat
1582238	Bw68	Body weight QTL 68	3.2	0.0064	body mass (VT:0001259)	body weight (CMO:0000012)	3	53184593	115665732	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	98535386	161695835	Rat
1582239	Epfw1	Epididymal fat weight QTL 1	4.5	0.0006	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	3	53184593	115665732	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	31172320	163586636	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	47233211	147415807	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	38192233	133483320	Rat
1582216	Bw65	Body weight QTL 65	6.3		body mass (VT:0001259)	body weight (CMO:0000012)	3	102200529	115665732	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	29463235	118376539	Rat
1582218	Bw74	Body weight QTL 74	3.9	0.0021	body mass (VT:0001259)	body weight (CMO:0000012)	3	53184593	115665732	Rat
1582219	Bw63	Body weight QTL 63	3.8	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	3	96127817	115665732	Rat
1582221	Kidm30	Kidney mass QTL 30	3.5	0.0008	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	3	64655305	115665732	Rat
1581568	Rf53	Renal function QTL 53			urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	3	56395968	161299569	Rat
1582210	Bw71	Body weight QTL 71	3.3	0.0012	body mass (VT:0001259)	body weight (CMO:0000012)	3	64655305	115665732	Rat
7387306	Bw124	Body weight QTL 124	3.2	0.0003	body mass (VT:0001259)	body weight (CMO:0000012)	3	84091273	129091273	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	112681431	157681431	Rat
1300111	Rf12	Renal function QTL 12	3.78		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	61017749	121056321	Rat
724523	Tsu1	Thymus enlargement suppressive QTL 1	3.84		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	3	50437504	115638231	Rat
1600376	Arunc5	Aerobic running capacity QTL 5		0.21	exercise endurance trait (VT:0002332)	longest distance run on treadmill (CMO:0001406)	3	73376539	118376539	Rat
8694437	Bw167	Body weight QTL 167	22.46	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	3	91797474	136797474	Rat
2302273	Gluco35	Glucose level QTL 35	5.3	0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	80800231	114297550	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	59242096	157323038	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	43827364	169034231	Rat
1581503	Cm58	Cardiac mass QTL 58	2.7	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	43827364	121056321	Rat
1354611	Despr2	Despair related QTL 2	3.03	0.0028	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	3	97084464	142084464	Rat
631649	Bp123	Blood pressure QTL 123	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	89772419	134772419	Rat
631841	Niddm39	Non-insulin dependent diabetes mellitus QTL 39	3.36		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	94856903	159898684	Rat
619618	Rf3	Renal disease susceptibility QTL 3	6.5	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate to body weight ratio (CMO:0001270)	3	107693393	152693393	Rat
12879848	Bw181	Body weght QTL 181		0.015	body mass (VT:0001259)	body weight (CMO:0000012)	3	70348525	121056321	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	41874578	155617519	Rat
2312659	Slep7	Serum leptin concentration QTL 7		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	3	98535255	168026850	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	41874578	155617519	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	78196190	146592722	Rat
631665	Bw8	Body weight QTL 8	5.5		body mass (VT:0001259)	body weight (CMO:0000012)	3	50437042	119183768	Rat
1331758	Bp207	Blood pressure QTL 207	2.848		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	112287552	135181505	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
2293087	Iddm27	Insulin dependent diabetes mellitus QTL 27	2.68		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	97551417	147415807	Rat
2312670	Bw94	Body weight QTL 94		0.01	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	3	98535255	168026850	Rat
724532	Cm17	Cardiac mass QTL 17	2		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	3	95735366	140735366	Rat

Markers in Region

RH131433

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	113,406,190 - 113,406,384 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	118,441,720 - 118,441,913	NCBI	Rnor6.0
Rnor_5.0	3	124,966,338 - 124,966,531	UniSTS	Rnor5.0
RGSC_v3.4	3	113,594,603 - 113,594,796	UniSTS	RGSC3.4
Celera	3	112,258,641 - 112,258,834	UniSTS
RH 3.4 Map	3	1002.1	UniSTS
Cytogenetic Map	3	q36	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	89	59	6	353	189	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001013921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001393773	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430097	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234914	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC112572	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC079068	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000012966 ⟹ ENSRNOP00000012966

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	133,847,748 - 133,860,316 (+)	Ensembl
mRatBN7.2 Ensembl	3	113,394,383 - 113,408,105 (+)	Ensembl
Rnor_6.0 Ensembl	3	118,430,511 - 118,442,098 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000120319 ⟹ ENSRNOP00000085303

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	133,845,819 - 133,860,316 (+)	Ensembl
mRatBN7.2 Ensembl	3	113,392,457 - 113,408,105 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000124932 ⟹ ENSRNOP00000099621

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	133,841,935 - 133,855,755 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000144942 ⟹ ENSRNOP00000106033

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	133,842,879 - 133,860,316 (+)	Ensembl

RefSeq Acc Id:

NM_001013921 ⟹ NP_001013943

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	133,848,377 - 133,859,965 (+)	NCBI
mRatBN7.2	3	113,394,982 - 113,406,570 (+)	NCBI
Rnor_6.0	3	118,430,511 - 118,442,099 (+)	NCBI
Rnor_5.0	3	124,952,331 - 124,968,604 (+)	NCBI
RGSC_v3.4	3	113,583,394 - 113,594,982 (+)	RGD
Celera	3	112,247,432 - 112,259,020 (+)	RGD

Sequence:

show sequence

GTGGGTACTGTCAGTGTCTACATTTTATATTTGAAATCATCTTTAATATAGACTTTCCATTTTT
TTATGAAAGAATAGTTTGCAAGAGTAACTGAAATTGCTCTTTTGAGTTGGTTTTTAATTTTGTA
TTTTCAAGCTTATCAACTTAGTGGGTTTTGAACTTAGTAATATCTATTGAAAAATACTAAGCCC
AACAGTGTAACTTATATTGGGCAATTTTATTTGTAATAACAGTACAATGTTGATATTTCATTCC
TTCTCACTTTAATTTTTACAGTGTACCTATGATACACGCTTTAGAAACAGAATACTTTGGTTCA
AAGAAAAAAATGGCTCTCAGTCCATCTGTAGTTCCTCAAGAAAGTGAAGAAAACAATGCAAACT
GTGTAGAAACGAAACAGTCACAAACTGCTTCCACTGCATCAGAGGACCCCCTTCAACACTTATG
CTTAGCGTCTCAGGAGGTGCTTCATAAGGCTCAGCAAAGTGGGAGGTCACGGTGTCTTCAATGT
GGTGGCTCAAGGATGTTCTACTGCTACACATGCTATGTCCCGGTGGAAAATGTGCCCACTGAGC
AGATCCCGTTTGTGCAGCTTCCACTGAAGATTGATATCATTAAGCATCCGAATGAAACAGACGG
CAAAAGCACGGCTGTGCACGCAAAGCTCTTGGCGCCGGACTCTGTGAACATTTACACATATCCC
TGCATTCCGGAGTATGAAGGGCAGGACCACGAGGTTGTACTTGTTTTTCCTGGACCTCAGTCTA
TCTCAATAAAAGATGTCTCTTTCCATCTACAAAAACGGATCGAAAGTAAAGGTGGAGACAAAGC
TGACGACCTGGATATGCCACCTCGTAAGCTCGTGAGGACTGAGGCACAGGAAGGCTGGCATTTG
AATGAGAGCATGGGCAAAGGCCCAGAGCTGAAAAGAGTTGTCTTTATTGACAGCACCTGGAGCC
AGACAAACCAGATCACCTCTGATGAGCGGCTTCGGGAGTTATTACAAGTTGAACTGAAAACAAG
AAAAACTTGCTTTTGGCGCCATCAAAAAGGGAAGCCAGATACTTTCCTTTCCACAATTGAAGCC
ATTTATTACTTCCTGGTGGACTACCATAGAGCCGTGCAGAAGGAGGAGTACAGAGGACAATATG
ACAACCTTTTGTTCTTCTACTCCTTTATGTACCGCTTGATAAAGGAGGCCAGACGCTCTGGAGA
GAAGGCCAAACAGAAGCCCATCCATTAGTTCTGCAAGCCCTCTTGACCTGTGCTCTGCAGTGCT
CGCTAGCGTGCAGCCAAGCCTTGTTTCCCCTGGGGTAATAACCATGCGTGATGCCCATGAGAGG
ACCCCGGGGAGAGTCCAGCCTTGTTCATTTTATTGTATTTTTTTAATGGGAAATTTGAATTTTG
GCATTTTTAAGAGATGATCCTGATAGAGAGACAGATCAGAAGCTATTTGCTCATTTTGGGCATA
TCTCATTATATGAGGCATTTAATATGCTGTGCTACATTTATGTGATGTAATTATATGTGATTAA
AGAGTGTCATATCTTTTCACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001393773 ⟹ NP_001380702

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	133,845,870 - 133,859,965 (+)	NCBI
mRatBN7.2	3	113,392,473 - 113,406,570 (+)	NCBI

RefSeq Acc Id:

XM_006234914 ⟹ XP_006234976

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	133,845,768 - 133,859,965 (+)	NCBI
mRatBN7.2	3	113,392,402 - 113,406,570 (+)	NCBI
Rnor_6.0	3	118,427,986 - 118,443,003 (+)	NCBI
Rnor_5.0	3	124,952,331 - 124,968,604 (+)	NCBI

Sequence:

show sequence

TGCGGAAAGCACTCCGGGCGGGGCGCGTGGAGCGGAGGCCGTACGGACCGAGAGTTCGTCGTGG
TGCAGTGTACCTATGATACACGCTTTAGAAACAGAATACTTTGGTTCAAAGAAAAAAATGGCTC
TCAGTCCATCTGTAGTTCCTCAAGAAAGTGAAGAAAACAATGCAAACTGTGTAGAAACGAAACA
GTCACAAACTGCTTCCACTGCATCAGAGGACCCCCTTCAACACTTATGCTTAGCGTCTCAGGAG
GTGCTTCATAAGGCTCAGCAAAGTGGGAGGTCACGGTGTCTTCAATGTGGTGGCTCAAGGATGT
TCTACTGCTACACATGCTATGTCCCGGTGGAAAATGTGCCCACTGAGCAGATCCCGTTTGTGCA
GCTTCCACTGAAGATTGATATCATTAAGCATCCGAATGAAACAGACGGCAAAAGCACGGCTGTG
CACGCAAAGCTCTTGGCGCCGGACTCTGTGAACATTTACACATATCCCTGCATTCCGGAGTATG
AAGGGCAGGACCACGAGGTTGTACTTGTTTTTCCTGGACCTCAGTCTATCTCAATAAAAGATGT
CTCTTTCCATCTACAAAAACGGATCGAAAGTAAAAGTGGAGACAAAGCTGACGACCTGGATATG
CCACCTCGTAAGCTCGTGAGGACTGAGGCACAGGAAGGCTGGCATTTGAATGAGAGCATGGGCA
AAGGCCCAGAGCTGAAAAGAGTTGTCTTTATTGACAGCACCTGGAGCCAGACAAACCAGATCAC
CTCTGATGAGCGGCTTCGGGAGTTATTACAAGTTGAACTGAAAACAAGAAAAACTTGCTTTTGG
CGCCATCAAAAAGGGAAGCCAGATACTTTCCTTTCCACAATTGAAGCCATTTATTACTTCCTGG
TGGACTACCATAGAGCCGTGCAGAAGGAGGAGTACAGAGGACAATATGACAACCTTTTGTTCTT
CTACTCCTTTATGTACCGCTTGATAAAGGAGGCCAGACGCTCTGGAGAGAAGGCCAAACAGAAG
CCCATCCATTAGTTCTGCAAGCCCTCTTGACCTGTGCTCTGCAGTGCTCGCTAGCGTGCAGCCA
AGCCTTGTTTCCCCTGGGGTAATAACCATGCGTGATGCCCATGAGAGGACCCCGGGGAGAGTCC
AGCCTTGTTCATTTTATTGTATTTTTTTAATGGGAAATTTGAATTTTGGCATTTTTAAGAGATG
ATCCTGATAGAGAGACAGATCAGAAGCTATTTGCTCATTTTGGGCATATCTCATTATATGAGGC
ATTTAATATGCTGTGCTACATTTATGTGATGTAATTATATGTGATTAAAGAGTGTCATATCTTT
TCACTTATACTTGCCCTTACCTTTGGATTTAAAGGAGGTTAGAATTTGTTGGAGAAAAAAAGAA
AAAAGGGGAAAAAAAGAAATGTAGTTTGCTTCAGGTTGGTGACAGAAGGCAGAGGTGAGTGTGC
TGTGCTGTCTCTGGAGTCCACACTCCCTCCTGCTGCCCAGCCTCTACTCCAGCAGAGAACTGAA
GCACCATGTGGTCCTGCCAGAGGGATGGGCACATGACCCATTTTGGCAAGTCACATGGCCCAAC
AGGACCAGGTGTGTTTTGATGTATGAGGGATTCTGTAGAAGATGGAATTTATTTTTCAAGCATG
ATACAGGGTTAAAATAAATCTTTCATTTTTAAAACGTGCCTAGAAGTAAAGGTAAGCTCAGATT
AATTTATGTAGAGCAAAGTCTGGGTTGGGGCAGGGTCAGGACTATGCTAAAGTCAGACCGCCCT
GAGCTGAATCTGTTGTCATTTACCCAGCTCTTCAAACCATCAAAACGGTTACAAGGTTGAGGGA
AAAGGGAGGGAACAGTTTGATCACTCATTTGCCCCTCTCATGGCAGCCTTAAGAAAGAAGGCCC
ACACACTTCAGATGAAGTGCCCAGCCTGGCAGCCAGAGTGTCTCTAGTCCTCCCTGAATGCGTA
GCATGCCTGTAAGAATAATAAGAAATTGGCTGTACTTGTCTTCTTTCTCTTCAGGGTGGTAGAC
TCCCTGTGTCACGGCCCGGGAGCCCTTCTGTTACTTTGACTCTGCATCATCAGCATTCCCATTC
AGACTCTGCTTGCTGTTGACATATGAACATGCGTGGCTATGCTTGCCCGCTGCTGCAGACAAGA
TGGCTTTACCCATCTGCCCCAGGACTTCTGTGTAGGTCAGCTGACAAGACAGCCACCTCCCTGA
CTCCTAACATGCAAG

hide sequence

RefSeq Acc Id:

XM_017591578 ⟹ XP_017447067

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	133,845,890 - 133,859,965 (+)	NCBI
mRatBN7.2	3	113,392,443 - 113,408,751 (+)	NCBI
Rnor_6.0	3	118,428,073 - 118,442,099 (+)	NCBI

Sequence:

show sequence

CCGGTAGCTGGGGCCAGACACCGGACAGGCCCAGCGAAGGTCTTACTGCGGGCGAACGCTGCGT
GTGGCGTTCCTGTGGGGAAAGACTCGAAAGGTCTGGGGCCTAAATAAGCCTTATTAGGCTCCCC
AAGTCGGCGTTGCTCACTCCAGGCACAGCCAACTCCCTGTGAGCGCGGATGTGTAATTCAGGCA
CTGGAGTGGTTTCAGGGTGGTTGCAGAAGAAGGAAGACAGATGTGTGCTGTTAACATCAGCTGA
TAAGCAGAAGCTTTTCTTTGTACCTATGATACACGCTTTAGAAACAGAATACTTTGGTTCAAAG
AAAAAAATGGCTCTCAGTCCATCTGTAGTTCCTCAAGAAAGTGAAGAAAACAATGCAAACTGTG
TAGAAACGAAACAGTCACAAACTGCTTCCACTGCATCAGAGGACCCCCTTCAACACTTATGCTT
AGCGTCTCAGGAGGTGCTTCATAAGGCTCAGCAAAGTGGGAGGTCACGGTGTCTTCAATGTGGT
GGCTCAAGGATGTTCTACTGCTACACATGCTATGTCCCGGTGGAAAATGTGCCCACTGAGCAGA
TCCCGTTTGTGCAGCTTCCACTGAAGATTGATATCATTAAGCATCCGAATGAAACAGACGGCAA
AAGCACGGCTGTGCACGCAAAGCTCTTGGCGCCGGACTCTGTGAACATTTACACATATCCCTGC
ATTCCGGAGTATGAAGGGCAGGACCACGAGGTTGTACTTGTTTTTCCTGGACCTCAGTCTATCT
CAATAAAAGATGTCTCTTTCCATCTACAAAAACGGATCGAAAGTAAAAGTGGAGACAAAGCTGA
CGACCTGGATATGCCACCTCGTAAGCTCGTGAGGACTGAGGCACAGGAAGGCTGGCATTTGAAT
GAGAGCATGGGCAAAGGCCCAGAGCTGAAAAGAGTTGTCTTTATTGACAGCACCTGGAGCCAGA
CAAACCAGATCACCTCTGATGAGCGGCTTCGGGAGTTATTACAAGTTGAACTGAAAACAAGAAA
AACTTGCTTTTGGCGCCATCAAAAAGGGAAGCCAGATACTTTCCTTTCCACAATTGAAGCCATT
TATTACTTCCTGGTGGACTACCATAGAGCCGTGCAGAAGGAGGAGTACAGAGGACAATATGACA
ACCTTTTGTTCTTCTACTCCTTTATGTACCGCTTGATAAAGGAGGCCAGACGCTCTGGAGAGAA
GGCCAAACAGAAGCCCATCCATTAGTTCTGCAAGCCCTCTTGACCTGTGCTCTGCAGTGCTCGC
TAGCGTGCAGCCAAGCCTTGTTTCCCCTGGGGTAATAACCATGCGTGATGCCCATGAGAGGACC
CCGGGGAGAGTCCAGCCTTGTTCATTTTATTGTATTTTTTTAATGGGAAATTTGAATTTTGGCA
TTTTTAAGAGATGATCCTGATAGAGAGACAGATCAGAAGCTATTTGCTCATTTTGGGCATATCT
CATTATATGAGGCATTTAATATGCTGTGCTACATTTATGTGATGTAATTATATGTGATTAAAGA
GTGTCATATCTTTTCACTTA

hide sequence

RefSeq Acc Id:

XM_039104565 ⟹ XP_038960493

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	133,845,862 - 133,859,965 (+)	NCBI
mRatBN7.2	3	113,392,457 - 113,409,322 (+)	NCBI

RefSeq Acc Id:

XM_063283325 ⟹ XP_063139395

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	133,845,833 - 133,859,435 (+)	NCBI

RefSeq Acc Id:

XM_063283326 ⟹ XP_063139396

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	133,845,837 - 133,859,435 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001013943	(Get FASTA)	NCBI Sequence Viewer
	NP_001380702	(Get FASTA)	NCBI Sequence Viewer
	NP_001417026	(Get FASTA)	NCBI Sequence Viewer
	XP_006234976	(Get FASTA)	NCBI Sequence Viewer
	XP_017447067	(Get FASTA)	NCBI Sequence Viewer
	XP_038960493	(Get FASTA)	NCBI Sequence Viewer
	XP_063139395	(Get FASTA)	NCBI Sequence Viewer
	XP_063139396	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH79068	(Get FASTA)	NCBI Sequence Viewer
	EDL80083	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000012966
	ENSRNOP00000085303
	ENSRNOP00000099621
GenBank Protein	Q6AYF5	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001013943 ⟸ NM_001013921

- UniProtKB:

Q6AYF5 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MALSPSVVPQESEENNANCVETKQSQTASTASEDPLQHLCLASQEVLHKAQQSGRSRCLQCGGS
RMFYCYTCYVPVENVPTEQIPFVQLPLKIDIIKHPNETDGKSTAVHAKLLAPDSVNIYTYPCIP
EYEGQDHEVVLVFPGPQSISIKDVSFHLQKRIESKGGDKADDLDMPPRKLVRTEAQEGWHLNES
MGKGPELKRVVFIDSTWSQTNQITSDERLRELLQVELKTRKTCFWRHQKGKPDTFLSTIEAIYY
FLVDYHRAVQKEEYRGQYDNLLFFYSFMYRLIKEARRSGEKAKQKPIH

hide sequence

RefSeq Acc Id:

XP_006234976 ⟸ XM_006234914

- Peptide Label:

isoform X2

- Sequence:

show sequence

MIHALETEYFGSKKKMALSPSVVPQESEENNANCVETKQSQTASTASEDPLQHLCLASQEVLHK
AQQSGRSRCLQCGGSRMFYCYTCYVPVENVPTEQIPFVQLPLKIDIIKHPNETDGKSTAVHAKL
LAPDSVNIYTYPCIPEYEGQDHEVVLVFPGPQSISIKDVSFHLQKRIESKSGDKADDLDMPPRK
LVRTEAQEGWHLNESMGKGPELKRVVFIDSTWSQTNQITSDERLRELLQVELKTRKTCFWRHQK
GKPDTFLSTIEAIYYFLVDYHRAVQKEEYRGQYDNLLFFYSFMYRLIKEARRSGEKAKQKPIH

hide sequence

RefSeq Acc Id:	XP_017447067 ⟸ XM_017591578
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZZV5 (UniProtKB/TrEMBL), F1M7Q4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCNSGTGVVSGWLQKKEDRCVLLTSADKQKLFFVPMIHALETEYFGSKKKMALSPSVVPQESEE NNANCVETKQSQTASTASEDPLQHLCLASQEVLHKAQQSGRSRCLQCGGSRMFYCYTCYVPVEN VPTEQIPFVQLPLKIDIIKHPNETDGKSTAVHAKLLAPDSVNIYTYPCIPEYEGQDHEVVLVFP GPQSISIKDVSFHLQKRIESKSGDKADDLDMPPRKLVRTEAQEGWHLNESMGKGPELKRVVFID STWSQTNQITSDERLRELLQVELKTRKTCFWRHQKGKPDTFLSTIEAIYYFLVDYHRAVQKEEY RGQYDNLLFFYSFMYRLIKEARRSGEKAKQKPIH hide sequence

Ensembl Acc Id:

ENSRNOP00000012966 ⟸ ENSRNOT00000012966

RefSeq Acc Id:	XP_038960493 ⟸ XM_039104565
- Peptide Label:	isoform X2
- UniProtKB:	Q6AYF5 (UniProtKB/Swiss-Prot), A6HPY2 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000085303 ⟸ ENSRNOT00000120319

RefSeq Acc Id:	NP_001380702 ⟸ NM_001393773
- UniProtKB:	Q6AYF5 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063139395 ⟸ XM_063283325
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063139396 ⟸ XM_063283326
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000099621 ⟸ ENSRNOT00000124932

Ensembl Acc Id:

ENSRNOP00000106033 ⟸ ENSRNOT00000144942

Protein Domains

DTW

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6AYF5-F1-model_v2	AlphaFold	Q6AYF5	1-304	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311144	AgrOrtholog
BioCyc Gene	G2FUF-48027	BioCyc
Ensembl Genes	ENSRNOG00000009593	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000012966	ENTREZGENE
	ENSRNOT00000120319	ENTREZGENE
	ENSRNOT00000124932	ENTREZGENE
IMAGE_CLONE	IMAGE:7121624	IMAGE-MGC_LOAD
InterPro	DTW	UniProtKB/Swiss-Prot
	tRNA_Mod/Golgi_Maint	UniProtKB/Swiss-Prot
KEGG Report	rno:296119	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:94022	IMAGE-MGC_LOAD
NCBI Gene	296119	ENTREZGENE
PANTHER	NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1	UniProtKB/Swiss-Prot
	TRNA-URIDINE AMINOCARBOXYPROPYLTRANSFERASE 1	UniProtKB/Swiss-Prot
Pfam	DTW	UniProtKB/Swiss-Prot
PhenoGen	Dtwd1	PhenoGen
RatGTEx	ENSRNOG00000009593	RatGTEx
SMART	DTW	UniProtKB/Swiss-Prot
UniProt	A0A8I5ZZV5	ENTREZGENE, UniProtKB/TrEMBL
	A6HPY2	ENTREZGENE, UniProtKB/TrEMBL
	DTWD1_RAT	UniProtKB/Swiss-Prot
	F1M7Q4	ENTREZGENE, UniProtKB/TrEMBL
	Q6AYF5	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2006-03-30	Dtwd1	DTW domain containing 1	RGD1311144	similar to RIKEN cDNA 1810033A06	Symbol and Name updated	1299863	APPROVED
2005-12-06	RGD1311144	similar to RIKEN cDNA 1810033A06	RGD1311144_predicted	similar to RIKEN cDNA 1810033A06 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1311144_predicted	similar to RIKEN cDNA 1810033A06 (predicted)	LOC296119_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC296119_predicted	similar to RIKEN cDNA 1810033A06 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar