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Gene: Pum2 (pumilio RNA-binding family member 2) Rattus norvegicus

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Symbol:

Pum2

Name:

pumilio RNA-binding family member 2

RGD ID:

1311024

Description:

Predicted to enable RNA binding activity. Involved in several processes, including positive regulation of sprouting of injured axon; regulation of gene expression; and regulation of postsynapse assembly. Located in neuronal cell body. Is active in glutamatergic synapse and postsynapse. Orthologous to human PUM2 (pumilio RNA binding family member 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; benzo[a]pyrene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC298874; pumilio 2; pumilio 2 (Drosophila); pumilio homolog 2; pumilio homolog 2 (Drosophila)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PUM2 (pumilio RNA binding family member 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Pum2 (pumilio RNA-binding family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Pum2 (pumilio RNA binding family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PUM2 (pumilio RNA binding family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PUM2 (pumilio RNA binding family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pum2 (pumilio RNA binding family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PUM2 (pumilio RNA binding family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PUM2 (pumilio RNA binding family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pum2 (pumilio RNA binding family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Pum2 (pumilio RNA binding family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	BAX (BCL2 associated X, apoptosis regulator)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	PUM2 (pumilio RNA binding family member 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Pum2 (pumilio RNA-binding family member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pum2 (pumilio RNA-binding family member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pum2 (pumilio RNA-binding family member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	PUF3	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	puf-8	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	puf-9	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	puf-9	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	pum	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pum2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pum2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	37,182,013 - 37,262,223 (+)	Ensembl				GRCr8
mRatBN7.2	6	31,462,879 - 31,542,976 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	31,462,872 - 31,542,976 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	31,755,369 - 31,835,022 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	32,071,224 - 32,150,876 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	31,545,833 - 31,625,481 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	33,786,184 - 33,865,693 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	33,786,197 - 33,865,687 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	43,568,680 - 43,648,168 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	32,153,090 - 32,233,940 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	30,911,640 - 30,990,191 (+)	NCBI		Celera
RGSC_v3.1	6	32,155,891 - 32,236,909 (+)	NCBI
Cytogenetic Map	6	q14	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (ISO)

acetylsalicylic acid (ISO)

actinomycin D (ISO)

aflatoxin B1 (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (EXP)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

calciol (ISO)

carbon nanotube (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

dibenzo[a,l]pyrene (ISO)

doxorubicin (ISO)

ethanol (ISO)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

gentamycin (EXP)

indometacin (ISO)

ivermectin (ISO)

Nutlin-3 (ISO)

oxaliplatin (EXP)

paracetamol (EXP,ISO)

propiconazole (ISO)

sunitinib (ISO)

tamoxifen (ISO)

tert-butyl hydroperoxide (ISO)

titanium dioxide (ISO)

topotecan (EXP)

trichostatin A (ISO)

triptonide (ISO)

troglitazone (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adipose tissue development (IEA,ISO)

chromosome organization (IEA,ISO)

hair follicle development (IEA,ISO)

miRNA processing (IBA,IEA,ISO)

mitochondrion organization (IEA,ISO)

negative regulation of gene expression (IMP)

positive regulation of miRNA-mediated gene silencing (IEA,ISO)

positive regulation of RIG-I signaling pathway (IEA,ISO)

positive regulation of sprouting of injured axon (IMP)

post-transcriptional regulation of gene expression (IEA,ISO)

regulation of chromosome segregation (IEA,ISO)

regulation of intracellular mRNA localization (IMP)

regulation of mRNA stability (IBA,IEA,ISO)

regulation of postsynapse assembly (IDA,IMP)

regulation of translation (IMP)

respiratory electron transport chain (IEA,ISO)

skeletal system development (IEA,ISO)

stress granule assembly (IEA,ISO)

Cellular Component

cytoplasm (IBA)

cytoplasmic stress granule (IEA,ISO)

cytosol (IBA,IEA,ISO)

glutamatergic synapse (IDA)

neuronal cell body (IDA)

nuclear membrane (IEA,ISO)

perinuclear region of cytoplasm (IEA,ISO)

postsynapse (IDA)

Molecular Function

lncRNA binding (IEA,ISO)

miRNA binding (IEA,ISO)

mRNA 3'-UTR binding (IBA,IEA,ISO)

protein binding (ISO)

pumilio-response element binding (IEA,ISO)

RNA binding (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Pum2 Shapes the Transcriptome in Developing Axons through Retention of Target mRNAs in the Cell Body.	Martínez JC, etal., Neuron. 2019 Dec 4;104(5):931-946.e5. doi: 10.1016/j.neuron.2019.08.035. Epub 2019 Oct 9.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Dendritic localization of the translational repressor Pumilio 2 and its contribution to dendritic stress granules.	Vessey JP, etal., J Neurosci. 2006 Jun 14;26(24):6496-508. doi: 10.1523/JNEUROSCI.0649-06.2006.
7.	Mammalian Pumilio 2 regulates dendrite morphogenesis and synaptic function.	Vessey JP, etal., Proc Natl Acad Sci U S A. 2010 Feb 16;107(7):3222-7. doi: 10.1073/pnas.0907128107. Epub 2010 Jan 28.

Additional References at PubMed

PMID:11780640	PMID:18776931	PMID:19168546	PMID:19197241	PMID:19861488	PMID:22345517	PMID:22658674	PMID:22681889	PMID:23739961	PMID:25100735	PMID:25340845	PMID:26724866
PMID:28431233	PMID:32437714	PMID:37088847	PMID:39262254

Genomics

Comparative Map Data

Pum2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	37,182,013 - 37,262,223 (+)	Ensembl				GRCr8
mRatBN7.2	6	31,462,879 - 31,542,976 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	31,462,872 - 31,542,976 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	31,755,369 - 31,835,022 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	32,071,224 - 32,150,876 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	31,545,833 - 31,625,481 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	33,786,184 - 33,865,693 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	33,786,197 - 33,865,687 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	43,568,680 - 43,648,168 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	32,153,090 - 32,233,940 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	30,911,640 - 30,990,191 (+)	NCBI		Celera
RGSC_v3.1	6	32,155,891 - 32,236,909 (+)	NCBI
Cytogenetic Map	6	q14	NCBI

PUM2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	20,248,691 - 20,352,253 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	20,248,691 - 20,352,234 (-)	Ensembl			hg38	GRCh38
GRCh37	2	20,448,452 - 20,552,014 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	20,311,934 - 20,390,625 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	20,370,080 - 20,448,772	NCBI
Celera	2	20,311,202 - 20,389,869 (-)	NCBI		Celera
Cytogenetic Map	2	p24.1	NCBI
HuRef	2	20,205,916 - 20,284,863 (-)	NCBI		HuRef
CHM1_1	2	20,377,810 - 20,456,489 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	20,282,228 - 20,385,776 (-)	NCBI		T2T-CHM13v2.0

Pum2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	8,724,092 - 8,802,583 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	8,724,134 - 8,802,581 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	8,674,092 - 8,752,583 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	8,674,134 - 8,752,581 (+)	Ensembl			mm10	GRCm38
MGSCv37	12	8,680,940 - 8,759,389 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	8,700,689 - 8,776,347 (+)	NCBI		MGSCv36	mm8
Celera	12	9,059,182 - 9,137,555 (+)	NCBI		Celera
Cytogenetic Map	12	A1.1	NCBI
cM Map	12	3.92	NCBI

Pum2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955469	2,810,573 - 2,886,611 (-)	Ensembl
ChiLan1.0	NW_004955469	2,810,825 - 2,886,911 (-)	NCBI	ChiLan1.0	ChiLan1.0

PUM2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	106,177,254 - 106,279,760 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	106,181,226 - 106,283,778 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	20,235,169 - 20,337,667 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	20,350,669 - 20,455,002 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	20,350,690 - 20,435,174 (-)	Ensembl			panPan2	panpan1.1

PUM2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	15,258,264 - 15,354,001 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	15,261,389 - 15,354,586 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	15,222,809 - 15,318,215 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	15,410,357 - 15,505,697 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	15,410,373 - 15,483,573 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	15,263,913 - 15,359,250 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	15,270,717 - 15,366,226 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	15,302,293 - 15,398,099 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Pum2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	59,684,387 - 59,772,333 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936493	11,067,202 - 11,155,377 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936493	11,067,318 - 11,154,133 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PUM2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	117,883,673 - 117,965,293 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	117,857,930 - 117,965,564 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	125,827,213 - 125,934,624 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PUM2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	87,368,288 - 87,473,282 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	87,391,219 - 87,474,676 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666045	24,751,161 - 24,856,242 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pum2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624738	2,950,415 - 3,043,011 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624738	2,951,253 - 3,042,905 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Pum2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	28,913,555 - 28,993,274 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Pum2
663 total Variants

miRNA Target Status (No longer updated)

Confirmed Target Of

miRNA Gene	Mature miRNA	Method Name	Result Type	Data Type	Support Type	PMID
Mir134	rno-miR-134-5p	Mirtarbase	external_info	Luciferase reporter assay	Functional MTI	19197241

Predicted Target Of

	Summary Value
Count of predictions:	518
Count of miRNA genes:	234
Interacting mature miRNAs:	320
Transcripts:	ENSRNOT00000008359
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
8552962	Pigfal16	Plasma insulin-like growth factor 1 level QTL 16	9.4		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	6	1975879	46975879	Rat
10401812	Kidm54	Kidney mass QTL 54			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	6	20097635	65097635	Rat
8552910	Pigfal5	Plasma insulin-like growth factor 1 level QTL 5	4.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	6	22653889	67653889	Rat
10401800	Kidm49	Kidney mass QTL 49			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	6	20097635	65097635	Rat
1300164	Rf15	Renal function QTL 15	3.12		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	6	3239989	48239989	Rat
1331779	Rf38	Renal function QTL 38	2.876		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	6	31185002	76185002	Rat
9589129	Insul24	Insulin level QTL 24	19.06	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	6	1975879	46975879	Rat
7411603	Foco13	Food consumption QTL 13	5.5	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	6	1975879	46975879	Rat
1598843	Cm63	Cardiac mass QTL 63	2.6		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	6	1	44788383	Rat
7411542	Bw127	Body weight QTL 127	5.5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	6	1975879	46975879	Rat
2292616	Ept15	Estrogen-induced pituitary tumorigenesis QTL 15	4.4		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	6	1	44788383	Rat
9589048	Scfw3	Subcutaneous fat weight QTL 3	4.57	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	6	1975879	46975879	Rat
2293839	Kiddil2	Kidney dilation QTL 2	4.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
1576309	Emca7	Estrogen-induced mammary cancer QTL 7	4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	20859430	113082285	Rat
2301964	Bp323	Blood pressure QTL 323	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	1	86868070	Rat
2293709	Bss23	Bone structure and strength QTL 23	5.18	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	6	3239989	48239989	Rat
2293650	Bss31	Bone structure and strength QTL 31	5.05	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	6	3239989	48239989	Rat
1578665	Bss16	Bone structure and strength QTL 16	4.4		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	6	33328841	78328841	Rat
2293841	Kiddil4	Kidney dilation QTL 4	4.4		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
1300128	Rf16	Renal function QTL 16	3.89		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	6	1	40163351	Rat
1641898	Colcr4	Colorectal carcinoma resistance QTL4	3.71	0.0007	intestine integrity trait (VT:0010554)	well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)	6	30937632	75937632	Rat
1578668	Bmd14	Bone mineral density QTL 14	3.8		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	6	33328841	78328841	Rat
70199	Coreg1	Compensatory renal growth QTL 1	11.8		kidney mass (VT:0002707)	compensatory renal growth score (CMO:0001894)	6	14599473	63457687	Rat
2301972	Bp325	Blood pressure QTL 325	4.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	16089372	61967788	Rat
1358190	Ept1	Estrogen-induced pituitary tumorigenesis QTL 1	4.4		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	6	1	44788383	Rat
2293656	Bss28	Bone structure and strength QTL 28	6.79	0.0001	femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	6	3239989	48239989	Rat
1354664	Slep2	Serum leptin concentration QTL 2	4.49		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	6	22288257	67288257	Rat

Markers in Region

D6Got27

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	6	37,259,038 - 37,259,321 (+)	Marker Load Pipeline
mRatBN7.2	6	31,539,789 - 31,540,074 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	33,862,511 - 33,862,791	NCBI	Rnor6.0
Rnor_5.0	6	43,644,986 - 43,645,266	UniSTS	Rnor5.0
RGSC_v3.4	6	32,230,757 - 32,231,038	RGD	RGSC3.4
RGSC_v3.4	6	32,230,758 - 32,231,038	UniSTS	RGSC3.4
RGSC_v3.1	6	32,233,710 - 32,233,991	RGD
Cytogenetic Map	6	q14	UniSTS

RH141048

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	31,542,581 - 31,542,786 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	33,865,299 - 33,865,503	NCBI	Rnor6.0
Rnor_5.0	6	43,647,774 - 43,647,978	UniSTS	Rnor5.0
RGSC_v3.4	6	32,233,546 - 32,233,750	UniSTS	RGSC3.4
Celera	6	30,989,797 - 30,990,001	UniSTS
Cytogenetic Map	6	q14	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106715	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434230	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434237	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434239	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434242	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006239879	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006239880	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006239883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006239884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594073	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111928	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111931	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111938	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261636	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261637	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261638	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261639	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261640	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261641	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261642	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261643	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261644	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC123473	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY724506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000008359 ⟹ ENSRNOP00000008359

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	37,182,576 - 37,262,223 (+)	Ensembl
mRatBN7.2 Ensembl	6	31,463,320 - 31,542,976 (+)	Ensembl
Rnor_6.0 Ensembl	6	33,786,627 - 33,865,687 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000082598 ⟹ ENSRNOP00000074592

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	37,182,143 - 37,259,963 (+)	Ensembl
mRatBN7.2 Ensembl	6	31,462,872 - 31,540,438 (+)	Ensembl
Rnor_6.0 Ensembl	6	33,786,197 - 33,863,059 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095958 ⟹ ENSRNOP00000089681

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	37,211,266 - 37,262,223 (+)	Ensembl
mRatBN7.2 Ensembl	6	31,492,016 - 31,542,976 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108134 ⟹ ENSRNOP00000081323

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	37,205,590 - 37,259,666 (+)	Ensembl
mRatBN7.2 Ensembl	6	31,463,320 - 31,542,976 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000161902 ⟹ ENSRNOP00000107432

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	37,182,013 - 37,259,977 (+)	Ensembl

RefSeq Acc Id:

NM_001106715 ⟹ NP_001100185

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,576 - 37,262,223 (+)	NCBI
mRatBN7.2	6	31,463,320 - 31,542,976 (+)	NCBI
Rnor_6.0	6	33,786,627 - 33,865,693 (+)	NCBI
Rnor_5.0	6	43,568,680 - 43,648,168 (+)	NCBI
RGSC_v3.4	6	32,153,090 - 32,233,940 (+)	RGD
Celera	6	30,911,640 - 30,990,191 (+)	RGD

Sequence:

show sequence

GGTTCCCGCAGTCTGGAAGAAGCTCGGTGGACCCAGAGAAACGTGCGAGTTGGAAGTTTGACCT
GTGGATGAAATGAATCATGATTTTCAAGCTCTTGCATTAGAATCTCGGGGAATGGGAGAGCTTT
TGCCTACCAAAAAATTTTGGGAACCTGATGATTCAACAAAAGATGGACAAAAAGGCATATTTCT
TGGGGATGATGAATGGAGAGAGACTGCATGGGGAACTTCTCATCATTCAATGTCCCAGCCTATT
ATGGTACAGAGAAGATCTGGACAGAGTTTTCATGGAAACAGTGAAGTAAATGCAATTCTTTCTC
CGCGCTCAGAAAGTGGAGGCCTTGGCGTGAGCATGGTAGAATATGTATTAAGTTCCTCTCCTGC
TGATAAATTGGATTCTCGATTTAGGAAGGGAACTTTTGGTACTAGAGATGCTGAAACAGATGGA
CCTGAGAAAGGAGATCAAAAAGGCAAGGCTTCTCCATTTGAGGAGGACCAAAACAGAGATCTTA
AACAAGATGATGAGGACTCTAAAATAAATGGCAGAGGTTTGCCAAATGGAATGGATGCCGATTG
CAAAGATTTTAATCGTACTCCGGGAAGTCGTCAAGCCTCTCCAACTGAAGTAGTTGAGCGCCTT
GGCCCTAGTACTAATCCCCCAGAAGGATTGGGTCCTCTTCCTAATCCGACAGCGAATAAACCAC
TTGTTGAAGAATTTTCAAATCCTGAAACTCAGAATCTGGATGCAATGGACCAAGTTGGTCTGGA
TTCCTTACAGTTTGACTATCCTGGTAATCAGGTACCCATGGATTCTTCAGGAGCTACTGTAGGC
CTTTTTGACTACAATTCCCAACAGCAGCTCTTTCAGAGGACTAATGCACTAACAGTTCAGCAGT
TAACTGCTGCTCAACAGCAGCAGTATGCATTAGCAGCAGCTCAGCAGCCGCATATAGCTGGTGT
ATTCTCAGCAGGCCTTGCTCCAGCTGCATTTGTGCCAAATCCATATATTATTAGTGCTGCTCCT
CCAGGGACCGACCCGTATACTGCAGCAGGATTGGCTGCAGCAGCAACATTAGCAGGTCCAGCAG
TGGTTCCACCTCAGTATTATGGTGTTCCATGGGGGGTGTATCCAGCCAATTTATTTCAGCAACA
AGCTGCAGCTGCGGCAAGCAACACAGCCAATCAGCAAGCAGCATCACAAGCTCAGCCTGGACAG
CAGCAGGTTCTTCGTCCTGGAGCAGGTCAACGTCCTATTACTCCCAGTCAGGGCCAACAAGGGC
AGCAAGCAGAGTCACTTGCAGCAGCCGCAGCTGCAAACCCAACTTTGGCTTTTGGTCAGAGTCT
TGCTGCAGGCATGCCAGGCTATCAAGTACTAGCTCCAACTGCCTATTATGATCAGACTGGTGCC
TTAGTGGTTGGCCCTGGAGCAAGAACTGGCCTTGGAGCTCCAGTACGATTAATGGCTCCAACAC
CTGTCTTAATTAGTTCAGCAGCAGCACAAGCTGCAGCAGCAGCAGCAGCAGCTGGAGGAACTGC
AAATAGTCTTACAGGCAGCACAAACGGTCTGTTTCGGCCGATTGGCACTCAGCCACCGCAGCAG
CAGCAGCAGCAGCAGCCAAGCACTAACCTGCAGTCTAATTCGTTTTATGGGAGCAGCTCTTTGA
CTAACAGCTCCCAGAGCAGCTCTTTATTTTCTCACGGACCTGGCCAACCTGGAAGTGCATCTCT
TGGCTTTGGAAGTGGTAGCTCTTTGGGAGCCGCTATAGGCTCAGCTCTCAGTGGATTTGGCTCA
TCAGTTGGCAGTTCTGCAAGTAGTAGTGCCACAAGGAGAGAGTCTCTATCTACTAGCTCTGACT
TGTACAAAAGATCTAGTAGCAGCCTAGCACCCATAGGGCAACCATTTTACAATAGTCTGGGATT
TTCCTCCTCTCCAAGTCCAATAGGCATGCCTCTGCCAAGCCAAACTCCAGGACATTCACTTACG
CCACCGCCATCACTTTCATCACATGGATCCTCATCCAGAGGCCTGACAAATGGTAGTGGTCGGT
ACATCTCTGCAGCACCTGGAGCGGAAGCAAAGTACCGGAGCGCTTCCAGCACTTCCAGCCTGTT
CAGCTCCAGCAGCCAGCTCTTTCCTCCCTCTCGGCTCCGCTATAACAGATCTGATATCATGCCC
TCTGGCCGCAGCAGGCTATTGGAAGATTTCAGGAACAACCGCTTCCCCAACCTCCAGCTTAGAG
ACTTGATGGGACATATAGTCGAGTTTTCTCAAGACCAGCATGGCTCTAGATTCATACAGCAGAA
GCTAGAGAGAGCTACTCCAGCTGAGCGACAGATGGTATTTAATGAAATTGTACAGGCTGCCTAT
CAATTAATGACAGATGTTTTTGGAAACTATGTTATACAGAAGTTTTTTGAGTTTGGAAGTTTGG
ATCAGAAATTAGCCCTGGCTAATCGTATTCGTGGTCATGTTCTACCATTAGCCTTGCAGATGTA
TGGCTGCCGTGTTATTCAAAAAGCATTAGAATCTATTTCTTCTGATCAGCAGAGTGAAATGGTC
AAGGAACTTGATGGTCATGTACTTAAATGTGTGAAAGATCAGAATGGAAACCATGTTGTACAGA
AGTGTATTGAATGTGTTCAACCGCAGTCACTGCAGTTCATCATCGATGCTTTCAAAGGACAAGT
ATTTGTGCTTTCAACCCATCCTTACGGCTGCAGAGTCATTCAGCGGATCTTAGAGCACTGTACT
GCAGAGCAGACTTTACCCATCTTAGAAGAGCTTCACCAACACACAGAGCAGTTGGTACAGGATC
AGTATGGCAATTATGTTATTCAGCATGTACTGGAACATGGTCGGCCTGAAGACAAGAGCAAAAT
TGTTTCTGAAATCAGAGGAAAGGTCTTAGCCCTGAGTCAACACAAATTTGCCAGCAATGTAGTA
GAAAAGTGTGTTACTCATGCCTCACGTGCTGAGAGAGCTTTACTGATTGATGAGGTCTGCTGTC
AGAATGATGGTCCTCACAGTGCCTTATACACCATGATGAAGGATCAATATGCCAACTATGTGGT
TCAGAAGATGATTGATATGGCTGAGCCTGCTCAGAGAAAGATAATCATGCACAAGATTCGACCT
CACATCACTACTCTTCGCAAATACACATATGGGAAGCATATACTGGCCAAGTTGGAAAAATACT
ATTTGAAAAACAGCCCAGATCTAGGGCCTATTGGAGGACCACCAAATGGAATGCTGTAAGGAAA
AACGAGAAGATGATTTAACCATGTTCAAAGAATGGGTTTTCTTTGTGAATTATCAAAACACAAT
TCAACTATGAATCTTTGATTTTTTTTTTAAAGCAAAACTATTTATTGACTTTCTTCATCCATTT
GTAAATTTTTAAGGTTCTTGTGTATATTTAGGGGGTGGGGGTGGTGAATTATAAATTATATTCA
ACCCTGAGTGGAGACCTATCAGATTGGATTTCTGGTGAAGCACAGAATGCCTGTATATGATGTA
ACTGTGTCCCCCCCACAAAAAAAAAAAAGGAAAAAAAGTTGTCGCATATTTTGTAAATTTATAC
CTTGTAAAGTCACAAAAAATAGTTTTTAAAGGGAAAAGTACAATATTTTAATAAACTGGCTTGC
AGTCTGGTAGGTCTACAACCCCATAGCACAACAGGTTTATAGAGATGTATATAGAATTATAGTT
CTTATTTTTTTCCTTTGTGTGAAGCCTTTTATAACAGAATAACAATCAACTGCATAAATATTAT
TAATATTTTAAAAAGAAAGTTAAGTTGTATTTTGGTAATTCACAAACTATCATGCAAAGAAAAA
CTCAGAAAGACAGAAAAGAATAAAATGATTTGAGATAACATTATTTACAGTGGATGTGGTTTTA
ATAAAATTACTGCCCTATAATGTCTCTGACAATGTACAGAATTGTATATACTTATAATTGTAAT
GAGTTAGAAACAAAATCATGGTGGCACTTCCATTCAGTTAAAACTGCACTGAATGAAAAGTTAA
ATTTCAAACTAACTTTTCAGTTTGGTTTGCAACAAGAATGGATGGAGATTTATATTTTGTTCTA
ATTATAGAATTACTAGACTGTTGAGGAAGTGATGGTTTATCCTGCGTTTTCATAGTAGATACAT
AAAGTAGGACCCGATAGAGGTGAGAGAGGCCACTGAGAAGTGAACTGATAGCTCAGCATTTACG
CATGACTGCATATTCAGAGAGCTTTTTTTTCCCTTCCTATAAATAAACACATTGTGTGTGTAGG
GGTAGATGTAAGTTTACAATTTGAAAGCAGATCTTGTTTCAGTGTTTGTTATGAAAGCCTTGCT
AATTTCGTAGTGACTTTCCTTGGTTGTACAGGTGTACATTTGTAAACCTTCATGCTGTAAATGG
AATCTGTTTTCTCTCTTTGGAAAACACTTGCATTTTAGTGTACATTTCCATCCCTGCCCTCTTT
AACCTGGCAATATAGTGTTGTATAATGTAAATTTATTTCTCCAAATTGAGAGTGATTTTTAAAA
ATTTTTTATCTTTATATGGTTTCAGAAGTATGAACCAGCTTTCTTTTTATTATTGTGGGAAACA
TTTTGTTTTATAACATAGTTGTTGACTCTGTTAATAATGGACATGCTAGGATCTGGATCACTTT
CAATTGAAGTCAGGGTATTGTGCATAGTGAGTAGAAAGTGTTGGACTGAGATTGATTACCACAG
AGGCCAATGCTTTTCCATCTTTAAATGTGATGTGACTTTTTTCTTTGTACAGAAGAGTACTGTA
TTTTTGAATAGCCTACTCCCAAGTAAGAGCAGATCTGTATGATAACATTTTTCCTCTGGACATA
AGACATTATAACAGTAACATGATGTACATTTACAACGCGGCCTTATGTACATTTCCCAACAATC
TTTTTAAGGCAAAATTGTGACCATATGTGTATAATTAAAATCGTTTTTAATCCTTTGCCTATGA
AAATATTTTGGAAAAAATTGCTTTGTATATTCAGTTTCTGAAAGATAAAGAAAGTGCTTTGTAT
TTTGTTGAAGTCAGTATTTTGTATAAACTTTATGTTGACCCACTTACGTACATTCAGTGCTGAA
AACTGAAATGACCATGCAAGTTCTGGCAGGTGAATTGTAGAAGGGATTCTTACTTGAGGTCTGC
AGAAGAAAAACTATGAGAGCACAATATTGAGTATGAAGATTCCATCCTTTTGTTACTCAGATCA
TGAACCTTAAAATTTGGCATGGAGTTTGGGGTGCCAGGAGTCTTTCACATTGATATTGAGTTAC
TGTAGCTTTCTAACCCAACATTCCTTGGTGAGGCCATTAAGTCTGGCCACGTGTCACCATTCTC
GGTCACACTGGTTCATCAGCATGTCCCTGTCACAGTAGCAGTATTCTCTCTCATGTAGAATGAC
TCTCTTTCCCCTTTTTATTACTTTGTTTTGCCAGCTTCAGAGTGTCTTGGCCCTGGGTTGAATT
TAACTTCCCTTCATCAGCCCATGGTTTCGGGTTAAAGCTGTCAGTGTTAGAGATTGGTTACAGC
TCTTCTTGCAGAAATGCAGCCCATTCTGGTGTGTCCTCACCTTTCCCTTTGGATGTCCCGACAG
CTGTCACTCGGCTCAGAAGGTGGCAAGTCCTAGAGAAAGTTATTTGGAACTGAATCCTCCTCTA
GCAGTCCTGATTCATACCTCCCAGTGCTGACAACCCAGTCCTCCTGATATTTTTAGGCATATTC
TAGAAAAATACCTGTTCGTGTAGAAAATTTATGATCTGCCAATTTTGGTGCCCACCCCGATTCT
ACCTTCTAGTATGTTGGCATGGAACTTTAGAAAAATCGGACATTTCAGAATAAAGACATCTGAT
TGGGCAGAATCTGCTTAGGCTTTACTTTTGAGTGTCTCTTTTTGATATAGATTGTTTCTGGACC
AGTTTGTCTAAGTCCTGGCTCTTATTGGCTCATATGAAATGTCATCTTCACTTTGTATATTATG
TATAAATTAGAAAATGAAACGTGTGAATAACATTGTATGAAATAAACCTGGTCTTGTGTTTTTC
TCTAGATAAAA

hide sequence

RefSeq Acc Id:

XM_006239879 ⟹ XP_006239941

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI
mRatBN7.2	6	31,462,879 - 31,542,969 (+)	NCBI
Rnor_6.0	6	33,786,184 - 33,865,688 (+)	NCBI
Rnor_5.0	6	43,568,680 - 43,648,168 (+)	NCBI

Sequence:

show sequence

AGGGAGGTAGGAGGAGGAGAAAGAAGACGTCGCCGCCACCGGAGGCGGAGGGGGAGGACGGACG
GCCGAGAGCGTCGCCGCCGGTGCCCAACGGTCGGTGTCTCCCGGCTGAGGCAGCGCGGCCGCAG
CAGCCCTGTTTGACCTGTGGATGAAATGAATCATGATTTTCAAGCTCTTGCATTAGAATCTCGG
GGAATGGGAGAGCTTTTGCCTACCAAAAAATTTTGGGAACCTGATGATTCAACAAAAGATGGAC
AAAAAGGCATATTTCTTGGGGATGATGAATGGAGAGAGACTGCATGGGGAACTTCTCATCATTC
AATGTCCCAGCCTATTATGGTACAGAGAAGATCTGGACAGAGTTTTCATGGAAACAGTGAAGTA
AATGCAATTCTTTCTCCGCGCTCAGAAAGTGGAGGCCTTGGCGTGAGCATGGTAGAATATGTAT
TAAGTTCCTCTCCTGCTGATAAATTGGATTCTCGATTTAGGAAGGGAACTTTTGGTACTAGAGA
TGCTGAAACAGATGGACCTGAGAAAGGAGATCAAAAAGGCAAGGCTTCTCCATTTGAGGAGGAC
CAAAACAGAGATCTTAAACAAGATGATGAGGACTCTAAAATAAATGGCAGAGGTTTGCCAAATG
GAATGGATGCCGATTGCAAAGATTTTAATCGTACTCCGGGAAGTCGTCAAGCCTCTCCAACTGA
AGTAGTTGAGCGCCTTGGCCCTAGTACTAATCCCCCAGAAGGATTGGGTCCTCTTCCTAATCCG
ACAGCGAATAAACCACTTGTTGAAGAATTTTCAAATCCTGAAACTCAGAATCTGGATGCAATGG
ACCAAGTTGGTCTGGATTCCTTACAGTTTGACTATCCTGGTAATCAGGTACCCATGGATTCTTC
AGGAGCTACTGTAGGCCTTTTTGACTACAATTCCCAACAGCAGCTCTTTCAGAGGACTAATGCA
CTAACAGTTCAGCAGTTAACTGCTGCTCAACAGCAGCAGTATGCATTAGCAGCAGCTCAGCAGC
CGCATATAGCTGGTGTATTCTCAGCAGGCCTTGCTCCAGCTGCATTTGTGCCAAATCCATATAT
TATTAGTGCTGCTCCTCCAGGGACCGACCCGTATACTGCAGCAGGATTGGCTGCAGCAGCAACA
TTAGCAGGTCCAGCAGTGGTTCCACCTCAGTATTATGGTGTTCCATGGGGGGTGTATCCAGCCA
ATTTATTTCAGCAACAAGCTGCAGCTGCGGCAAGCAACACAGCCAATCAGCAAGCAGCATCACA
AGCTCAGCCTGGACAGCAGCAGGTTCTTCGTCCTGGAGCAGGTCAACGTCCTATTACTCCCAGT
CAGGGCCAACAAGGGCAGCAAGCAGAGTCACTTGCAGCAGCCGCAGCTGCAAACCCAACTTTGG
CTTTTGGTCAGAGTCTTGCTGCAGGCATGCCAGGCTATCAAGTACTAGCTCCAACTGCCTATTA
TGATCAGACTGGTGCCTTAGTGGTTGGCCCTGGAGCAAGAACTGGCCTTGGAGCTCCAGTACGA
TTAATGGCTCCAACACCTGTCTTAATTAGTTCAGCAGCAGCACAAGCTGCAGCAGCAGCAGCAG
CAGCTGGAGGAACTGCAAATAGTCTTACAGGCAGCACAAACGGTCTGTTTCGGCCGATTGGCAC
TCAGCCACCGCAGCAGCAGCAGCAGCAGCAGCCAAGCACTAACCTGCAGTCTAATTCGTTTTAT
GGGAGCAGCTCTTTGACTAACAGCTCCCAGAGCAGCTCTTTATTTTCTCACGGACCTGGCCAAC
CTGGAAGTGCATCTCTTGGCTTTGGAAGTGGTAGCTCTTTGGGAGCCGCTATAGGCTCAGCTCT
CAGTGGATTTGGCTCATCAGTTGGCAGTTCTGCAAGTAGTAGTGCCACAAGGAGAGAGTCTCTA
TCTACTAGCTCTGACTTGTACAAAAGATCTAGTAGCAGCCTAGCACCCATAGGGCAACCATTTT
ACAATAGTCTGGGATTTTCCTCCTCTCCAAGTCCAATAGGCATGCCTCTGCCAAGCCAAACTCC
AGGACATTCACTTACGCCACCGCCATCACTTTCATCACATGGATCCTCATCCAGTTTGCATTTA
GGAGGCCTGACAAATGGTAGTGGTCGGTACATCTCTGCAGCACCTGGAGCGGAAGCAAAGTACC
GGAGCGCTTCCAGCACTTCCAGCCTGTTCAGCTCCAGCAGCCAGCTCTTTCCTCCCTCTCGGCT
CCGCTATAACAGATCTGATATCATGCCCTCTGGCCGCAGCAGGCTATTGGAAGATTTCAGGAAC
AACCGCTTCCCCAACCTCCAGCTTAGAGACTTGATGGGACATATAGTCGAGTTTTCTCAAGACC
AGCATGGCTCTAGATTCATACAGCAGAAGCTAGAGAGAGCTACTCCAGCTGAGCGACAGATGGT
ATTTAATGAAATTGTACAGGCTGCCTATCAATTAATGACAGATGTTTTTGGAAACTATGTTATA
CAGAAGTTTTTTGAGTTTGGAAGTTTGGATCAGAAATTAGCCCTGGCTAATCGTATTCGTGGTC
ATGTTCTACCATTAGCCTTGCAGATGTATGGCTGCCGTGTTATTCAAAAAGCATTAGAATCTAT
TTCTTCTGATCAGCAGGTAATTAGTGAAATGGTCAAGGAACTTGATGGTCATGTACTTAAATGT
GTGAAAGATCAGAATGGAAACCATGTTGTACAGAAGTGTATTGAATGTGTTCAACCGCAGTCAC
TGCAGTTCATCATCGATGCTTTCAAAGGACAAGTATTTGTGCTTTCAACCCATCCTTACGGCTG
CAGAGTCATTCAGCGGATCTTAGAGCACTGTACTGCAGAGCAGACTTTACCCATCTTAGAAGAG
CTTCACCAACACACAGAGCAGTTGGTACAGGATCAGTATGGCAATTATGTTATTCAGCATGTAC
TGGAACATGGTCGGCCTGAAGACAAGAGCAAAATTGTTTCTGAAATCAGAGGAAAGGTCTTAGC
CCTGAGTCAACACAAATTTGCCAGCAATGTAGTAGAAAAGTGTGTTACTCATGCCTCACGTGCT
GAGAGAGCTTTACTGATTGATGAGGTCTGCTGTCAGAATGATGGTCCTCACAGTGCCTTATACA
CCATGATGAAGGATCAATATGCCAACTATGTGGTTCAGAAGATGATTGATATGGCTGAGCCTGC
TCAGAGAAAGATAATCATGCACAAGATTCGACCTCACATCACTACTCTTCGCAAATACACATAT
GGGAAGCATATACTGGCCAAGTTGGAAAAATACTATTTGAAAAACAGCCCAGATCTAGGGCCTA
TTGGAGGACCACCAAATGGAATGCTGTAAGGAAAAACGAGAAGATGATTTAACCATGTTCAAAG
AATGGGTTTTCTTTGTGAATTATCAAAACACAATTCAACTATGAATCTTTGATTTTTTTTTTAA
AGCAAAACTATTTATTGACTTTCTTCATCCATTTGTAAATTTTTAAGGTTCTTGTGTATATTTA
GGGGGTGGGGGTGGTGAATTATAAATTATATTCAACCCTGAGTGGAGACCTATCAGATTGGATT
TCTGGTGAAGCACAGAATGCCTGTATATGATGTAACTGTGTCCCCCCCACAAAAAAAAAAAAGG
AAAAAAAGTTGTCGCATATTTTGTAAATTTATACCTTGTAAAGTCACAAAAAATAGTTTTTAAA
GGGAAAAGTACAATATTTTAATAAACTGGCTTGCAGTCTGGTAGGTCTACAACCCCATAGCACA
ACAGGTTTATAGAGATGTATATAGAATTATAGTTCTTATTTTTTTCCTTTGTGTGAAGCCTTTT
ATAACAGAATAACAATCAACTGCATAAATATTATTAATATTTTAAAAAGAAAGTTAAGTTGTAT
TTTGGTAATTCACAAACTATCATGCAAAGAAAAACTCAGAAAGACAGAAAAGAATAAAATGATT
TGAGATAACATTATTTACAGTGGATGTGGTTTTAATAAAATTACTGCCCTATAATGTCTCTGAC
AATGTACAGAATTGTATATACTTATAATTGTAATGAGTTAGAAACAAAATCATGGTGGCACTTC
CATTCAGTTAAAACTGCACTGAATGAAAAGTTAAATTTCAAACTAACTTTTCAGTTTGGTTTGC
AACAAGAATGGATGGAGATTTATATTTTGTTCTAATTATAGAATTACTAGACTGTTGAGGAAGT
GATGGTTTATCCTGCGTTTTCATAGTAGATACATAAAGTAGGACCCGATAGAGGTGAGAGAGGC
CACTGAGAAGTGAACTGATAGCTCAGCATTTACGCATGACTGCATATTCAGAGAGCTTTTTTTT
CCCTTCCTATAAATAAACACATTGTGTGTGTAGGGGTAGATGTAAGTTTACAATTTGAAAGCAG
ATCTTGTTTCAGTGTTTGTTATGAAAGCCTTGCTAATTTCGTAGTGACTTTCCTTGGTTGTACA
GGTGTACATTTGTAAACCTTCATGCTGTAAATGGAATCTGTTTTCTCTCTTTGGAAAACACTTG
CATTTTAGTGTACATTTCCATCCCTGCCCTCTTTAACCTGGCAATATAGTGTTGTATAATGTAA
ATTTATTTCTCCAAATTGAGAGTGATTTTTAAAAATTTTTTATCTTTATATGGTTTCAGAAGTA
TGAACCAGCTTTCTTTTTATTATTGTGGGAAACATTTTGTTTTATAACATAGTTGTTGACTCTG
TTAATAATGGACATGCTAGGATCTGGATCACTTTCAATTGAAGTCAGGGTATTGTGCATAGTGA
GTAGAAAGTGTTGGACTGAGATTGATTACCACAGAGGCCAATGCTTTTCCATCTTTAAATGTGA
TGTGACTTTTTTCTTTGTACAGAAGAGTACTGTATTTTTGAATAGCCTACTCCCAAGTAAGAGC
AGATCTGTATGATAACATTTTTCCTCTGGACATAAGACATTATAACAGTAACATGATGTACATT
TACAACGCGGCCTTATGTACATTTCCCAACAATCTTTTTAAGGCAAAATTGTGACCATATGTGT
ATAATTAAAATCGTTTTTAATCCTTTGCCTATGAAAATATTTTGGAAAAAATTGCTTTGTATAT
TCAGTTTCTGAAAGATAAAGAAAGTGCTTTGTATTTTGTTGAAGTCAGTATTTTGTATAAACTT
TATGTTGACCCACTTACGTACATTCAGTGCTGAAAACTGAAATGACCATGCAAGTTCTGGCAGG
TGAATTGTAGAAGGGATTCTTACTTGAGGTCTGCAGAAGAAAAACTATGAGAGCACAATATTGA
GTATGAAGATTCCATCCTTTTGTTACTCAGATCATGAACCTTAAAATTTGGCATGGAGTTTGGG
GTGCCAGGAGTCTTTCACATTGATATTGAGTTACTGTAGCTTTCTAACCCAACATTCCTTGGTG
AGGCCATTAAGTCTGGCCACGTGTCACCATTCTCGGTCACACTGGTTCATCAGCATGTCCCTGT
CACAGTAGCAGTATTCTCTCTCATGTAGAATGACTCTCTTTCCCCTTTTTATTACTTTGTTTTG
CCAGCTTCAGAGTGTCTTGGCCCTGGGTTGAATTTAACTTCCCTTCATCAGCCCATGGTTTCGG
GTTAAAGCTGTCAGTGTTAGAGATTGGTTACAGCTCTTCTTGCAGAAATGCAGCCCATTCTGGT
GTGTCCTCACCTTTCCCTTTGGATGTCCCGACAGCTGTCACTCGGCTCAGAAGGTGGCAAGTCC
TAGAGAAAGTTATTTGGAACTGAATCCTCCTCTAGCAGTCCTGATTCATACCTCCCAGTGCTGA
CAACCCAGTCCTCCTGATATTTTTAGGCATATTCTAGAAAAATACCTGTTCGTGTAGAAAATTT
ATGATCTGCCAATTTTGGTGCCCACCCCGATTCTACCTTCTAGTATGTTGGCATGGAACTTTAG
AAAAATCGGACATTTCAGAATAAAGACATCTGATTGGGCAGAATCTGCTTAGGCTTTACTTTTG
AGTGTCTCTTTTTGATATAGATTGTTTCTGGACCAGTTTGTCTAAGTCCTGGCTCTTATTGGCT
CATATGAAATGTCATCTTCACTTTGTATATTATGTATAAATTAGAAAATGAAACGTGTGAATAA
CATTGTATGAAATAAACCTGGTCTTGTGTTTTTCTCTAGA

hide sequence

RefSeq Acc Id:

XM_006239880 ⟹ XP_006239942

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI
mRatBN7.2	6	31,462,879 - 31,542,969 (+)	NCBI
Rnor_6.0	6	33,786,205 - 33,865,688 (+)	NCBI
Rnor_5.0	6	43,568,680 - 43,648,168 (+)	NCBI

Sequence:

show sequence

AGAAGACGTCGCCGCCACCGGAGGCGGAGGGGGAGGACGGACGGCCGAGAGCGTCGCCGCCGGT
GCCCAACGGTCGGTGTCTCCCGGCTGAGGCAGCGCGGCCGCAGCAGCCCTGTTTGACCTGTGGA
TGAAATGAATCATGATTTTCAAGCTCTTGCATTAGAATCTCGGGGAATGGGAGAGCTTTTGCCT
ACCAAAAAATTTTGGGAACCTGATGATTCAACAAAAGATGGACAAAAAGGCATATTTCTTGGGG
ATGATGAATGGAGAGAGACTGCATGGGGAACTTCTCATCATTCAATGTCCCAGCCTATTATGGT
ACAGAGAAGATCTGGACAGAGTTTTCATGGAAACAGTGAAGTAAATGCAATTCTTTCTCCGCGC
TCAGAAAGTGGAGGCCTTGGCGTGAGCATGGTAGAATATGTATTAAGTTCCTCTCCTGCTGATA
AATTGGATTCTCGATTTAGGAAGGGAACTTTTGGTACTAGAGATGCTGAAACAGATGGACCTGA
GAAAGGAGATCAAAAAGGCAAGGCTTCTCCATTTGAGGAGGACCAAAACAGAGATCTTAAACAA
GATGATGAGGACTCTAAAATAAATGGCAGAGGTTTGCCAAATGGAATGGATGCCGATTGCAAAG
ATTTTAATCGTACTCCGGGAAGTCGTCAAGCCTCTCCAACTGAAGTAGTTGAGCGCCTTGGCCC
TAGTACTAATCCCCCAGAAGGATTGGGTCCTCTTCCTAATCCGACAGCGAATAAACCACTTGTT
GAAGAATTTTCAAATCCTGAAACTCAGAATCTGGATGCAATGGACCAAGTTGGTCTGGATTCCT
TACAGTTTGACTATCCTGGTAATCAGGTACCCATGGATTCTTCAGGAGCTACTGTAGGCCTTTT
TGACTACAATTCCCAACAGCAGCTCTTTCAGAGGACTAATGCACTAACAGTTCAGCAGTTAACT
GCTGCTCAACAGCAGCAGTATGCATTAGCAGCAGCTCAGCAGCCGCATATAGCTGGTGTATTCT
CAGCAGGCCTTGCTCCAGCTGCATTTGTGCCAAATCCATATATTATTAGTGCTGCTCCTCCAGG
GACCGACCCGTATACTGCAGCAGGATTGGCTGCAGCAGCAACATTAGCAGGTCCAGCAGTGGTT
CCACCTCAGTATTATGGTGTTCCATGGGGGGTGTATCCAGCCAATTTATTTCAGCAACAAGCTG
CAGCTGCGGCAAGCAACACAGCCAATCAGCAAGCAGCATCACAAGCTCAGCCTGGACAGCAGCA
GGTTCTTCGTCCTGGAGCAGGTCAACGTCCTATTACTCCCAGTCAGGGCCAACAAGGGCAGCAA
GCAGAGTCACTTGCAGCAGCCGCAGCTGCAAACCCAACTTTGGCTTTTGGTCAGAGTCTTGCTG
CAGGCATGCCAGGCTATCAAGTACTAGCTCCAACTGCCTATTATGATCAGACTGGTGCCTTAGT
GGTTGGCCCTGGAGCAAGAACTGGCCTTGGAGCTCCAGTACGATTAATGGCTCCAACACCTGTC
TTAATTAGTTCAGCAGCAGCACAAGCTGCAGCAGCAGCAGCAGCAGCTGGAGGAACTGCAAATA
GTCTTACAGGCAGCACAAACGGTCTGTTTCGGCCGATTGGCACTCAGCCACCGCAGCAGCAGCA
GCAGCAGCAGCCAAGCACTAACCTGCAGTCTAATTCGTTTTATGGGAGCAGCTCTTTGACTAAC
AGCTCCCAGAGCAGCTCTTTATTTTCTCACGGACCTGGCCAACCTGGAAGTGCATCTCTTGGCT
TTGGAAGTGGTAGCTCTTTGGGAGCCGCTATAGGCTCAGCTCTCAGTGGATTTGGCTCATCAGT
TGGCAGTTCTGCAAGTAGTAGTGCCACAAGGAGAGAGTCTCTATCTACTAGCTCTGACTTGTAC
AAAAGATCTAGTAGCAGCCTAGCACCCATAGGGCAACCATTTTACAATAGTCTGGGATTTTCCT
CCTCTCCAAGTCCAATAGGCATGCCTCTGCCAAGCCAAACTCCAGGACATTCACTTACGCCACC
GCCATCACTTTCATCACATGGATCCTCATCCAGTTTGCATTTAGGAGGCCTGACAAATGGTAGT
GGTCGGTACATCTCTGCAGCACCTGGAGCGGAAGCAAAGTACCGGAGCGCTTCCAGCACTTCCA
GCCTGTTCAGCTCCAGCAGCCAGCTCTTTCCTCCCTCTCGGCTCCGCTATAACAGATCTGATAT
CATGCCCTCTGGCCGCAGCAGGCTATTGGAAGATTTCAGGAACAACCGCTTCCCCAACCTCCAG
CTTAGAGACTTGATGGGACATATAGTCGAGTTTTCTCAAGACCAGCATGGCTCTAGATTCATAC
AGCAGAAGCTAGAGAGAGCTACTCCAGCTGAGCGACAGATGGTATTTAATGAAATTGTACAGGC
TGCCTATCAATTAATGACAGATGTTTTTGGAAACTATGTTATACAGAAGTTTTTTGAGTTTGGA
AGTTTGGATCAGAAATTAGCCCTGGCTAATCGTATTCGTGGTCATGTTCTACCATTAGCCTTGC
AGATGTATGGCTGCCGTGTTATTCAAAAAGCATTAGAATCTATTTCTTCTGATCAGCAGAGTGA
AATGGTCAAGGAACTTGATGGTCATGTACTTAAATGTGTGAAAGATCAGAATGGAAACCATGTT
GTACAGAAGTGTATTGAATGTGTTCAACCGCAGTCACTGCAGTTCATCATCGATGCTTTCAAAG
GACAAGTATTTGTGCTTTCAACCCATCCTTACGGCTGCAGAGTCATTCAGCGGATCTTAGAGCA
CTGTACTGCAGAGCAGACTTTACCCATCTTAGAAGAGCTTCACCAACACACAGAGCAGTTGGTA
CAGGATCAGTATGGCAATTATGTTATTCAGCATGTACTGGAACATGGTCGGCCTGAAGACAAGA
GCAAAATTGTTTCTGAAATCAGAGGAAAGGTCTTAGCCCTGAGTCAACACAAATTTGCCAGCAA
TGTAGTAGAAAAGTGTGTTACTCATGCCTCACGTGCTGAGAGAGCTTTACTGATTGATGAGGTC
TGCTGTCAGAATGATGGTCCTCACAGTGCCTTATACACCATGATGAAGGATCAATATGCCAACT
ATGTGGTTCAGAAGATGATTGATATGGCTGAGCCTGCTCAGAGAAAGATAATCATGCACAAGAT
TCGACCTCACATCACTACTCTTCGCAAATACACATATGGGAAGCATATACTGGCCAAGTTGGAA
AAATACTATTTGAAAAACAGCCCAGATCTAGGGCCTATTGGAGGACCACCAAATGGAATGCTGT
AAGGAAAAACGAGAAGATGATTTAACCATGTTCAAAGAATGGGTTTTCTTTGTGAATTATCAAA
ACACAATTCAACTATGAATCTTTGATTTTTTTTTTAAAGCAAAACTATTTATTGACTTTCTTCA
TCCATTTGTAAATTTTTAAGGTTCTTGTGTATATTTAGGGGGTGGGGGTGGTGAATTATAAATT
ATATTCAACCCTGAGTGGAGACCTATCAGATTGGATTTCTGGTGAAGCACAGAATGCCTGTATA
TGATGTAACTGTGTCCCCCCCACAAAAAAAAAAAAGGAAAAAAAGTTGTCGCATATTTTGTAAA
TTTATACCTTGTAAAGTCACAAAAAATAGTTTTTAAAGGGAAAAGTACAATATTTTAATAAACT
GGCTTGCAGTCTGGTAGGTCTACAACCCCATAGCACAACAGGTTTATAGAGATGTATATAGAAT
TATAGTTCTTATTTTTTTCCTTTGTGTGAAGCCTTTTATAACAGAATAACAATCAACTGCATAA
ATATTATTAATATTTTAAAAAGAAAGTTAAGTTGTATTTTGGTAATTCACAAACTATCATGCAA
AGAAAAACTCAGAAAGACAGAAAAGAATAAAATGATTTGAGATAACATTATTTACAGTGGATGT
GGTTTTAATAAAATTACTGCCCTATAATGTCTCTGACAATGTACAGAATTGTATATACTTATAA
TTGTAATGAGTTAGAAACAAAATCATGGTGGCACTTCCATTCAGTTAAAACTGCACTGAATGAA
AAGTTAAATTTCAAACTAACTTTTCAGTTTGGTTTGCAACAAGAATGGATGGAGATTTATATTT
TGTTCTAATTATAGAATTACTAGACTGTTGAGGAAGTGATGGTTTATCCTGCGTTTTCATAGTA
GATACATAAAGTAGGACCCGATAGAGGTGAGAGAGGCCACTGAGAAGTGAACTGATAGCTCAGC
ATTTACGCATGACTGCATATTCAGAGAGCTTTTTTTTCCCTTCCTATAAATAAACACATTGTGT
GTGTAGGGGTAGATGTAAGTTTACAATTTGAAAGCAGATCTTGTTTCAGTGTTTGTTATGAAAG
CCTTGCTAATTTCGTAGTGACTTTCCTTGGTTGTACAGGTGTACATTTGTAAACCTTCATGCTG
TAAATGGAATCTGTTTTCTCTCTTTGGAAAACACTTGCATTTTAGTGTACATTTCCATCCCTGC
CCTCTTTAACCTGGCAATATAGTGTTGTATAATGTAAATTTATTTCTCCAAATTGAGAGTGATT
TTTAAAAATTTTTTATCTTTATATGGTTTCAGAAGTATGAACCAGCTTTCTTTTTATTATTGTG
GGAAACATTTTGTTTTATAACATAGTTGTTGACTCTGTTAATAATGGACATGCTAGGATCTGGA
TCACTTTCAATTGAAGTCAGGGTATTGTGCATAGTGAGTAGAAAGTGTTGGACTGAGATTGATT
ACCACAGAGGCCAATGCTTTTCCATCTTTAAATGTGATGTGACTTTTTTCTTTGTACAGAAGAG
TACTGTATTTTTGAATAGCCTACTCCCAAGTAAGAGCAGATCTGTATGATAACATTTTTCCTCT
GGACATAAGACATTATAACAGTAACATGATGTACATTTACAACGCGGCCTTATGTACATTTCCC
AACAATCTTTTTAAGGCAAAATTGTGACCATATGTGTATAATTAAAATCGTTTTTAATCCTTTG
CCTATGAAAATATTTTGGAAAAAATTGCTTTGTATATTCAGTTTCTGAAAGATAAAGAAAGTGC
TTTGTATTTTGTTGAAGTCAGTATTTTGTATAAACTTTATGTTGACCCACTTACGTACATTCAG
TGCTGAAAACTGAAATGACCATGCAAGTTCTGGCAGGTGAATTGTAGAAGGGATTCTTACTTGA
GGTCTGCAGAAGAAAAACTATGAGAGCACAATATTGAGTATGAAGATTCCATCCTTTTGTTACT
CAGATCATGAACCTTAAAATTTGGCATGGAGTTTGGGGTGCCAGGAGTCTTTCACATTGATATT
GAGTTACTGTAGCTTTCTAACCCAACATTCCTTGGTGAGGCCATTAAGTCTGGCCACGTGTCAC
CATTCTCGGTCACACTGGTTCATCAGCATGTCCCTGTCACAGTAGCAGTATTCTCTCTCATGTA
GAATGACTCTCTTTCCCCTTTTTATTACTTTGTTTTGCCAGCTTCAGAGTGTCTTGGCCCTGGG
TTGAATTTAACTTCCCTTCATCAGCCCATGGTTTCGGGTTAAAGCTGTCAGTGTTAGAGATTGG
TTACAGCTCTTCTTGCAGAAATGCAGCCCATTCTGGTGTGTCCTCACCTTTCCCTTTGGATGTC
CCGACAGCTGTCACTCGGCTCAGAAGGTGGCAAGTCCTAGAGAAAGTTATTTGGAACTGAATCC
TCCTCTAGCAGTCCTGATTCATACCTCCCAGTGCTGACAACCCAGTCCTCCTGATATTTTTAGG
CATATTCTAGAAAAATACCTGTTCGTGTAGAAAATTTATGATCTGCCAATTTTGGTGCCCACCC
CGATTCTACCTTCTAGTATGTTGGCATGGAACTTTAGAAAAATCGGACATTTCAGAATAAAGAC
ATCTGATTGGGCAGAATCTGCTTAGGCTTTACTTTTGAGTGTCTCTTTTTGATATAGATTGTTT
CTGGACCAGTTTGTCTAAGTCCTGGCTCTTATTGGCTCATATGAAATGTCATCTTCACTTTGTA
TATTATGTATAAATTAGAAAATGAAACGTGTGAATAACATTGTATGAAATAAACCTGGTCTTGT
GTTTTTCTCTAGA

hide sequence

RefSeq Acc Id:

XM_006239883 ⟹ XP_006239945

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI
mRatBN7.2	6	31,462,879 - 31,542,969 (+)	NCBI
Rnor_6.0	6	33,786,205 - 33,865,688 (+)	NCBI
Rnor_5.0	6	43,568,680 - 43,648,168 (+)	NCBI

Sequence:

show sequence

AGAAGACGTCGCCGCCACCGGAGGCGGAGGGGGAGGACGGACGGCCGAGAGCGTCGCCGCCGGT
GCCCAACGGTCGGTGTCTCCCGGCTGAGGCAGCGCGGCCGCAGCAGCCCTGTTTGACCTGTGGA
TGAAATGAATCATGATTTTCAAGCTCTTGCATTAGAATCTCGGGGAATGGGAGAGCTTTTGCCT
ACCAAAAAATTTTGGGAACCTGATGATTCAACAAAAGATGGACAAAAAGGCATATTTCTTGGGG
ATGATGAATGGAGAGAGACTGCATGGGGAACTTCTCATCATTCAATGTCCCAGCCTATTATGGT
ACAGAGAAGATCTGGACAGAGTTTTCATGGAAACAGTGAAGTAAATGCAATTCTTTCTCCGCGC
TCAGAAAGTGGAGGCCTTGGCGTGAGCATGGTAGAATATGTATTAAGTTCCTCTCCTGCTGATA
AATTGGATTCTCGATTTAGGAAGGGAACTTTTGGTACTAGAGATGCTGAAACAGATGGACCTGA
GAAAGGAGATCAAAAAGGCAAGGCTTCTCCATTTGAGGAGGACCAAAACAGAGATCTTAAACAA
GATGATGAGGACTCTAAAATAAATGGCAGAGGTTTGCCAAATGGAATGGATGCCGATTGCAAAG
ATTTTAATCGTACTCCGGGAAGTCGTCAAGCCTCTCCAACTGAAGTAGTTGAGCGCCTTGGCCC
TAGTACTAATCCCCCAGAAGGATTGGGTCCTCTTCCTAATCCGACAGCGAATAAACCACTTGTT
GAAGAATTTTCAAATCCTGAAACTCAGAATCTGGATGCAATGGACCAAGTTGGTCTGGATTCCT
TACAGTTTGACTATCCTGGTAATCAGGTACCCATGGATTCTTCAGGAGCTACTGTAGGCCTTTT
TGACTACAATTCCCAACAGCAGCTCTTTCAGAGGACTAATGCACTAACAGTTCAGCAGTTAACT
GCTGCTCAACAGCAGCAGTATGCATTAGCAGCAGCTCAGCAGCCGCATATAGCTGGTGTATTCT
CAGCAGGCCTTGCTCCAGCTGCATTTGTGCCAAATCCATATATTATTAGTGCTGCTCCTCCAGG
GACCGACCCGTATACTGCAGCAGGATTGGCTGCAGCAGCAACATTAGCAGGTCCAGCAGTGGTT
CCACCTCAGTATTATGGTGTTCCATGGGGGGTGTATCCAGCCAATTTATTTCAGCAACAAGCTG
CAGCTGCGGCAAGCAACACAGCCAATCAGCAAGCAGCATCACAAGCTCAGCCTGGACAGCAGCA
GGTTCTTCGTCCTGGAGCAGGTCAACGTCCTATTACTCCCAGTCAGGGCCAACAAGGGCAGCAA
GCAGAGTCACTTGCAGCAGCCGCAGCTGCAAACCCAACTTTGGCTTTTGGTCAGAGTCTTGCTG
CAGGCATGCCAGGCTATCAAGTACTAGCTCCAACTGCCTATTATGATCAGACTGGTGCCTTAGT
GGTTGGCCCTGGAGCAAGAACTGGCCTTGGAGCTCCAGTACGATTAATGGCTCCAACACCTGTC
TTAATTAGTTCAGCAGCAGCACAAGCTGCAGCAGCAGCAGCAGCAGCTGGAGGAACTGCAAATA
GTCTTACAGGCAGCACAAACGGTCTGTTTCGGCCGATTGGCACTCAGCCACCGCAGCAGCAGCA
GCAGCAGCAGCCAAGCACTAACCTGCAGTCTAATTCGTTTTATGGGAGCAGCTCTTTGACTAAC
AGCTCCCAGAGCAGCTCTTTATTTTCTCACGGACCTGGCCAACCTGGAAGTGCATCTCTTGGCT
TTGGAAGTGGTAGCTCTTTGGGAGCCGCTATAGGCTCAGCTCTCAGTGGATTTGGCTCATCAGG
AGGCCTGACAAATGGTAGTGGTCGGTACATCTCTGCAGCACCTGGAGCGGAAGCAAAGTACCGG
AGCGCTTCCAGCACTTCCAGCCTGTTCAGCTCCAGCAGCCAGCTCTTTCCTCCCTCTCGGCTCC
GCTATAACAGATCTGATATCATGCCCTCTGGCCGCAGCAGGCTATTGGAAGATTTCAGGAACAA
CCGCTTCCCCAACCTCCAGCTTAGAGACTTGATGGGACATATAGTCGAGTTTTCTCAAGACCAG
CATGGCTCTAGATTCATACAGCAGAAGCTAGAGAGAGCTACTCCAGCTGAGCGACAGATGGTAT
TTAATGAAATTGTACAGGCTGCCTATCAATTAATGACAGATGTTTTTGGAAACTATGTTATACA
GAAGTTTTTTGAGTTTGGAAGTTTGGATCAGAAATTAGCCCTGGCTAATCGTATTCGTGGTCAT
GTTCTACCATTAGCCTTGCAGATGTATGGCTGCCGTGTTATTCAAAAAGCATTAGAATCTATTT
CTTCTGATCAGCAGAGTGAAATGGTCAAGGAACTTGATGGTCATGTACTTAAATGTGTGAAAGA
TCAGAATGGAAACCATGTTGTACAGAAGTGTATTGAATGTGTTCAACCGCAGTCACTGCAGTTC
ATCATCGATGCTTTCAAAGGACAAGTATTTGTGCTTTCAACCCATCCTTACGGCTGCAGAGTCA
TTCAGCGGATCTTAGAGCACTGTACTGCAGAGCAGACTTTACCCATCTTAGAAGAGCTTCACCA
ACACACAGAGCAGTTGGTACAGGATCAGTATGGCAATTATGTTATTCAGCATGTACTGGAACAT
GGTCGGCCTGAAGACAAGAGCAAAATTGTTTCTGAAATCAGAGGAAAGGTCTTAGCCCTGAGTC
AACACAAATTTGCCAGCAATGTAGTAGAAAAGTGTGTTACTCATGCCTCACGTGCTGAGAGAGC
TTTACTGATTGATGAGGTCTGCTGTCAGAATGATGGTCCTCACAGTGCCTTATACACCATGATG
AAGGATCAATATGCCAACTATGTGGTTCAGAAGATGATTGATATGGCTGAGCCTGCTCAGAGAA
AGATAATCATGCACAAGATTCGACCTCACATCACTACTCTTCGCAAATACACATATGGGAAGCA
TATACTGGCCAAGTTGGAAAAATACTATTTGAAAAACAGCCCAGATCTAGGGCCTATTGGAGGA
CCACCAAATGGAATGCTGTAAGGAAAAACGAGAAGATGATTTAACCATGTTCAAAGAATGGGTT
TTCTTTGTGAATTATCAAAACACAATTCAACTATGAATCTTTGATTTTTTTTTTAAAGCAAAAC
TATTTATTGACTTTCTTCATCCATTTGTAAATTTTTAAGGTTCTTGTGTATATTTAGGGGGTGG
GGGTGGTGAATTATAAATTATATTCAACCCTGAGTGGAGACCTATCAGATTGGATTTCTGGTGA
AGCACAGAATGCCTGTATATGATGTAACTGTGTCCCCCCCACAAAAAAAAAAAAGGAAAAAAAG
TTGTCGCATATTTTGTAAATTTATACCTTGTAAAGTCACAAAAAATAGTTTTTAAAGGGAAAAG
TACAATATTTTAATAAACTGGCTTGCAGTCTGGTAGGTCTACAACCCCATAGCACAACAGGTTT
ATAGAGATGTATATAGAATTATAGTTCTTATTTTTTTCCTTTGTGTGAAGCCTTTTATAACAGA
ATAACAATCAACTGCATAAATATTATTAATATTTTAAAAAGAAAGTTAAGTTGTATTTTGGTAA
TTCACAAACTATCATGCAAAGAAAAACTCAGAAAGACAGAAAAGAATAAAATGATTTGAGATAA
CATTATTTACAGTGGATGTGGTTTTAATAAAATTACTGCCCTATAATGTCTCTGACAATGTACA
GAATTGTATATACTTATAATTGTAATGAGTTAGAAACAAAATCATGGTGGCACTTCCATTCAGT
TAAAACTGCACTGAATGAAAAGTTAAATTTCAAACTAACTTTTCAGTTTGGTTTGCAACAAGAA
TGGATGGAGATTTATATTTTGTTCTAATTATAGAATTACTAGACTGTTGAGGAAGTGATGGTTT
ATCCTGCGTTTTCATAGTAGATACATAAAGTAGGACCCGATAGAGGTGAGAGAGGCCACTGAGA
AGTGAACTGATAGCTCAGCATTTACGCATGACTGCATATTCAGAGAGCTTTTTTTTCCCTTCCT
ATAAATAAACACATTGTGTGTGTAGGGGTAGATGTAAGTTTACAATTTGAAAGCAGATCTTGTT
TCAGTGTTTGTTATGAAAGCCTTGCTAATTTCGTAGTGACTTTCCTTGGTTGTACAGGTGTACA
TTTGTAAACCTTCATGCTGTAAATGGAATCTGTTTTCTCTCTTTGGAAAACACTTGCATTTTAG
TGTACATTTCCATCCCTGCCCTCTTTAACCTGGCAATATAGTGTTGTATAATGTAAATTTATTT
CTCCAAATTGAGAGTGATTTTTAAAAATTTTTTATCTTTATATGGTTTCAGAAGTATGAACCAG
CTTTCTTTTTATTATTGTGGGAAACATTTTGTTTTATAACATAGTTGTTGACTCTGTTAATAAT
GGACATGCTAGGATCTGGATCACTTTCAATTGAAGTCAGGGTATTGTGCATAGTGAGTAGAAAG
TGTTGGACTGAGATTGATTACCACAGAGGCCAATGCTTTTCCATCTTTAAATGTGATGTGACTT
TTTTCTTTGTACAGAAGAGTACTGTATTTTTGAATAGCCTACTCCCAAGTAAGAGCAGATCTGT
ATGATAACATTTTTCCTCTGGACATAAGACATTATAACAGTAACATGATGTACATTTACAACGC
GGCCTTATGTACATTTCCCAACAATCTTTTTAAGGCAAAATTGTGACCATATGTGTATAATTAA
AATCGTTTTTAATCCTTTGCCTATGAAAATATTTTGGAAAAAATTGCTTTGTATATTCAGTTTC
TGAAAGATAAAGAAAGTGCTTTGTATTTTGTTGAAGTCAGTATTTTGTATAAACTTTATGTTGA
CCCACTTACGTACATTCAGTGCTGAAAACTGAAATGACCATGCAAGTTCTGGCAGGTGAATTGT
AGAAGGGATTCTTACTTGAGGTCTGCAGAAGAAAAACTATGAGAGCACAATATTGAGTATGAAG
ATTCCATCCTTTTGTTACTCAGATCATGAACCTTAAAATTTGGCATGGAGTTTGGGGTGCCAGG
AGTCTTTCACATTGATATTGAGTTACTGTAGCTTTCTAACCCAACATTCCTTGGTGAGGCCATT
AAGTCTGGCCACGTGTCACCATTCTCGGTCACACTGGTTCATCAGCATGTCCCTGTCACAGTAG
CAGTATTCTCTCTCATGTAGAATGACTCTCTTTCCCCTTTTTATTACTTTGTTTTGCCAGCTTC
AGAGTGTCTTGGCCCTGGGTTGAATTTAACTTCCCTTCATCAGCCCATGGTTTCGGGTTAAAGC
TGTCAGTGTTAGAGATTGGTTACAGCTCTTCTTGCAGAAATGCAGCCCATTCTGGTGTGTCCTC
ACCTTTCCCTTTGGATGTCCCGACAGCTGTCACTCGGCTCAGAAGGTGGCAAGTCCTAGAGAAA
GTTATTTGGAACTGAATCCTCCTCTAGCAGTCCTGATTCATACCTCCCAGTGCTGACAACCCAG
TCCTCCTGATATTTTTAGGCATATTCTAGAAAAATACCTGTTCGTGTAGAAAATTTATGATCTG
CCAATTTTGGTGCCCACCCCGATTCTACCTTCTAGTATGTTGGCATGGAACTTTAGAAAAATCG
GACATTTCAGAATAAAGACATCTGATTGGGCAGAATCTGCTTAGGCTTTACTTTTGAGTGTCTC
TTTTTGATATAGATTGTTTCTGGACCAGTTTGTCTAAGTCCTGGCTCTTATTGGCTCATATGAA
ATGTCATCTTCACTTTGTATATTATGTATAAATTAGAAAATGAAACGTGTGAATAACATTGTAT
GAAATAAACCTGGTCTTGTGTTTTTCTCTAGA

hide sequence

RefSeq Acc Id:

XM_017594073 ⟹ XP_017449562

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI
mRatBN7.2	6	31,462,879 - 31,542,969 (+)	NCBI
Rnor_6.0	6	33,786,205 - 33,865,688 (+)	NCBI

Sequence:

show sequence

AGAAGACGTCGCCGCCACCGGAGGCGGAGGGGGAGGACGGACGGCCGAGAGCGTCGCCGCCGGT
GCCCAACGGTCGGTGTCTCCCGGCTGAGGCAGCGCGGCCGCAGCAGCCCTGTTTGACCTGTGGA
TGAAATGAATCATGATTTTCAAGCTCTTGCATTAGAATCTCGGGGAATGGGAGAGCTTTTGCCT
ACCAAAAAATTTTGGGAACCTGATGATTCAACAAAAGATGGACAAAAAGGCATATTTCTTGGGG
ATGATGAATGGAGAGAGACTGCATGGGGAACTTCTCATCATTCAATGTCCCAGCCTATTATGGT
ACAGAGAAGATCTGGACAGAGTTTTCATGGAAACAGTGAAGTAAATGCAATTCTTTCTCCGCGC
TCAGAAAGTGGAGGCCTTGGCGTGAGCATGGTAGAATATGTATTAAGTTCCTCTCCTGCTGATA
AATTGGATTCTCGATTTAGGAAGGGAACTTTTGGTACTAGAGATGCTGAAACAGATGGACCTGA
GAAAGGAGATCAAAAAGGCAAGGCTTCTCCATTTGAGGAGGACCAAAACAGAGATCTTAAACAA
GATGATGAGGACTCTAAAATAAATGGCAGAGGTTTGCCAAATGGAATGGATGCCGATTGCAAAG
ATTTTAATCGTACTCCGGGAAGTCGTCAAGCCTCTCCAACTGAAGTAGTTGAGCGCCTTGGCCC
TAGTACTAATCCCCCAGAAGGATTGGGTCCTCTTCCTAATCCGACAGCGAATAAACCACTTGTT
GAAGAATTTTCAAATCCTGAAACTCAGAATCTGGATGCAATGGACCAAGTTGGTCTGGATTCCT
TACAGTTTGACTATCCTGGTAATCAGGTACCCATGGATTCTTCAGGAGCTACTGTAGGCCTTTT
TGACTACAATTCCCAACAGCAGCTCTTTCAGAGGACTAATGCACTAACAGTTCAGCAGTTAACT
GCTGCTCAACAGCAGCAGTATGCATTAGCAGCAGCTCAGCAGCCGCATATAGCTGGTGTATTCT
CAGCAGGCCTTGCTCCAGCTGCATTTGTGCCAAATCCATATATTATTAGTGCTGCTCCTCCAGG
GACCGACCCGTATACTGCAGCAGGATTGGCTGCAGCAGCAACATTAGCAGGTCCAGCAGTGGTT
CCACCTCAGTATTATGGTGTTCCATGGGGGGTGTATCCAGCCAATTTATTTCAGCAACAAGCTG
CAGCTGCGGCAAGCAACACAGCCAATCAGCAAGCAGCATCACAAGCTCAGCCTGGACAGCAGCA
GGTTCTTCGTCCTGGAGCAGGTCAACGTCCTATTACTCCCAGTCAGGGCCAACAAGGGCAGCAA
GCAGAGTCACTTGCAGCAGCCGCAGCTGCAAACCCAACTTTGGCTTTTGGTCAGAGTCTTGCTG
CAGGCATGCCAGGCTATCAAGTACTAGCTCCAACTGCCTATTATGATCAGACTGGTGCCTTAGT
GGTTGGCCCTGGAGCAAGAACTGGCCTTGGAGCTCCAGTACGATTAATGGCTCCAACACCTGTC
TTAATTAGTTCAGCAGCAGCACAAGCTGCAGCAGCAGCAGCAGCAGCTGGAGGAACTGCAAATA
GTCTTACAGGCAGCACAAACGGTCTGTTTCGGCCGATTGGCACTCAGCCACCGCAGCAGCAGCA
GCAGCAGCAGCCAAGCACTAACCTGCAGTCTAATTCGTTTTATGGGAGCAGCTCTTTGACTAAC
AGCTCCCAGAGCAGCTCTTTATTTTCTCACGGACCTGGCCAACCTGGAAGTGCATCTCTTGGCT
TTGGAAGTGGTAGCTCTTTGGGAGCCGCTATAGGCTCAGCTCTCAGTGGATTTGGCTCATCAGG
AGGCCTGACAAATGGTAGTGGTCGGTACATCTCTGCAGCACCTGGAGCGGAAGCAAAGTACCGG
AGCGCTTCCAGCACTTCCAGCCTGTTCAGCTCCAGCAGCCAGCTCTTTCCTCCCTCTCGGCTCC
GCTATAACAGATCTGATATCATGCCCTCTGGCCGCAGCAGGCTATTGGAAGATTTCAGGAACAA
CCGCTTCCCCAACCTCCAGCTTAGAGACTTGATGGGACATATAGTCGAGTTTTCTCAAGACCAG
CATGGCTCTAGATTCATACAGCAGAAGCTAGAGAGAGCTACTCCAGCTGAGCGACAGATGGTAT
TTAATGAAATTGTACAGGCTGCCTATCAATTAATGACAGATGTTTTTGGAAACTATGTTATACA
GAAGTTTTTTGAGTTTGGAAGTTTGGATCAGAAATTAGCCCTGGCTAATCGTATTCGTGGTCAT
GTTCTACCATTAGCCTTGCAGATGTATGGCTGCCGTGTTATTCAAAAAGCATTAGAATCTATTT
CTTCTGATCAGCAGGTAATTAGTGAAATGGTCAAGGAACTTGATGGTCATGTACTTAAATGTGT
GAAAGATCAGAATGGAAACCATGTTGTACAGAAGTGTATTGAATGTGTTCAACCGCAGTCACTG
CAGTTCATCATCGATGCTTTCAAAGGACAAGTATTTGTGCTTTCAACCCATCCTTACGGCTGCA
GAGTCATTCAGCGGATCTTAGAGCACTGTACTGCAGAGCAGACTTTACCCATCTTAGAAGAGCT
TCACCAACACACAGAGCAGTTGGTACAGGATCAGTATGGCAATTATGTTATTCAGCATGTACTG
GAACATGGTCGGCCTGAAGACAAGAGCAAAATTGTTTCTGAAATCAGAGGAAAGGTCTTAGCCC
TGAGTCAACACAAATTTGCCAGCAATGTAGTAGAAAAGTGTGTTACTCATGCCTCACGTGCTGA
GAGAGCTTTACTGATTGATGAGGTCTGCTGTCAGAATGATGGTCCTCACAGTGCCTTATACACC
ATGATGAAGGATCAATATGCCAACTATGTGGTTCAGAAGATGATTGATATGGCTGAGCCTGCTC
AGAGAAAGATAATCATGCACAAGATTCGACCTCACATCACTACTCTTCGCAAATACACATATGG
GAAGCATATACTGGCCAAGTTGGAAAAATACTATTTGAAAAACAGCCCAGATCTAGGGCCTATT
GGAGGACCACCAAATGGAATGCTGTAAGGAAAAACGAGAAGATGATTTAACCATGTTCAAAGAA
TGGGTTTTCTTTGTGAATTATCAAAACACAATTCAACTATGAATCTTTGATTTTTTTTTTAAAG
CAAAACTATTTATTGACTTTCTTCATCCATTTGTAAATTTTTAAGGTTCTTGTGTATATTTAGG
GGGTGGGGGTGGTGAATTATAAATTATATTCAACCCTGAGTGGAGACCTATCAGATTGGATTTC
TGGTGAAGCACAGAATGCCTGTATATGATGTAACTGTGTCCCCCCCACAAAAAAAAAAAAGGAA
AAAAAGTTGTCGCATATTTTGTAAATTTATACCTTGTAAAGTCACAAAAAATAGTTTTTAAAGG
GAAAAGTACAATATTTTAATAAACTGGCTTGCAGTCTGGTAGGTCTACAACCCCATAGCACAAC
AGGTTTATAGAGATGTATATAGAATTATAGTTCTTATTTTTTTCCTTTGTGTGAAGCCTTTTAT
AACAGAATAACAATCAACTGCATAAATATTATTAATATTTTAAAAAGAAAGTTAAGTTGTATTT
TGGTAATTCACAAACTATCATGCAAAGAAAAACTCAGAAAGACAGAAAAGAATAAAATGATTTG
AGATAACATTATTTACAGTGGATGTGGTTTTAATAAAATTACTGCCCTATAATGTCTCTGACAA
TGTACAGAATTGTATATACTTATAATTGTAATGAGTTAGAAACAAAATCATGGTGGCACTTCCA
TTCAGTTAAAACTGCACTGAATGAAAAGTTAAATTTCAAACTAACTTTTCAGTTTGGTTTGCAA
CAAGAATGGATGGAGATTTATATTTTGTTCTAATTATAGAATTACTAGACTGTTGAGGAAGTGA
TGGTTTATCCTGCGTTTTCATAGTAGATACATAAAGTAGGACCCGATAGAGGTGAGAGAGGCCA
CTGAGAAGTGAACTGATAGCTCAGCATTTACGCATGACTGCATATTCAGAGAGCTTTTTTTTCC
CTTCCTATAAATAAACACATTGTGTGTGTAGGGGTAGATGTAAGTTTACAATTTGAAAGCAGAT
CTTGTTTCAGTGTTTGTTATGAAAGCCTTGCTAATTTCGTAGTGACTTTCCTTGGTTGTACAGG
TGTACATTTGTAAACCTTCATGCTGTAAATGGAATCTGTTTTCTCTCTTTGGAAAACACTTGCA
TTTTAGTGTACATTTCCATCCCTGCCCTCTTTAACCTGGCAATATAGTGTTGTATAATGTAAAT
TTATTTCTCCAAATTGAGAGTGATTTTTAAAAATTTTTTATCTTTATATGGTTTCAGAAGTATG
AACCAGCTTTCTTTTTATTATTGTGGGAAACATTTTGTTTTATAACATAGTTGTTGACTCTGTT
AATAATGGACATGCTAGGATCTGGATCACTTTCAATTGAAGTCAGGGTATTGTGCATAGTGAGT
AGAAAGTGTTGGACTGAGATTGATTACCACAGAGGCCAATGCTTTTCCATCTTTAAATGTGATG
TGACTTTTTTCTTTGTACAGAAGAGTACTGTATTTTTGAATAGCCTACTCCCAAGTAAGAGCAG
ATCTGTATGATAACATTTTTCCTCTGGACATAAGACATTATAACAGTAACATGATGTACATTTA
CAACGCGGCCTTATGTACATTTCCCAACAATCTTTTTAAGGCAAAATTGTGACCATATGTGTAT
AATTAAAATCGTTTTTAATCCTTTGCCTATGAAAATATTTTGGAAAAAATTGCTTTGTATATTC
AGTTTCTGAAAGATAAAGAAAGTGCTTTGTATTTTGTTGAAGTCAGTATTTTGTATAAACTTTA
TGTTGACCCACTTACGTACATTCAGTGCTGAAAACTGAAATGACCATGCAAGTTCTGGCAGGTG
AATTGTAGAAGGGATTCTTACTTGAGGTCTGCAGAAGAAAAACTATGAGAGCACAATATTGAGT
ATGAAGATTCCATCCTTTTGTTACTCAGATCATGAACCTTAAAATTTGGCATGGAGTTTGGGGT
GCCAGGAGTCTTTCACATTGATATTGAGTTACTGTAGCTTTCTAACCCAACATTCCTTGGTGAG
GCCATTAAGTCTGGCCACGTGTCACCATTCTCGGTCACACTGGTTCATCAGCATGTCCCTGTCA
CAGTAGCAGTATTCTCTCTCATGTAGAATGACTCTCTTTCCCCTTTTTATTACTTTGTTTTGCC
AGCTTCAGAGTGTCTTGGCCCTGGGTTGAATTTAACTTCCCTTCATCAGCCCATGGTTTCGGGT
TAAAGCTGTCAGTGTTAGAGATTGGTTACAGCTCTTCTTGCAGAAATGCAGCCCATTCTGGTGT
GTCCTCACCTTTCCCTTTGGATGTCCCGACAGCTGTCACTCGGCTCAGAAGGTGGCAAGTCCTA
GAGAAAGTTATTTGGAACTGAATCCTCCTCTAGCAGTCCTGATTCATACCTCCCAGTGCTGACA
ACCCAGTCCTCCTGATATTTTTAGGCATATTCTAGAAAAATACCTGTTCGTGTAGAAAATTTAT
GATCTGCCAATTTTGGTGCCCACCCCGATTCTACCTTCTAGTATGTTGGCATGGAACTTTAGAA
AAATCGGACATTTCAGAATAAAGACATCTGATTGGGCAGAATCTGCTTAGGCTTTACTTTTGAG
TGTCTCTTTTTGATATAGATTGTTTCTGGACCAGTTTGTCTAAGTCCTGGCTCTTATTGGCTCA
TATGAAATGTCATCTTCACTTTGTATATTATGTATAAATTAGAAAATGAAACGTGTGAATAACA
TTGTATGAAATAAACCTGGTCTTGTGTTTTTCTCTAGA

hide sequence

RefSeq Acc Id:

XM_039111924 ⟹ XP_038967852

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI
mRatBN7.2	6	31,462,879 - 31,542,969 (+)	NCBI

RefSeq Acc Id:

XM_039111925 ⟹ XP_038967853

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI
mRatBN7.2	6	31,462,879 - 31,542,969 (+)	NCBI

RefSeq Acc Id:

XM_039111928 ⟹ XP_038967856

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI
mRatBN7.2	6	31,462,879 - 31,542,969 (+)	NCBI

RefSeq Acc Id:

XM_039111930 ⟹ XP_038967858

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI
mRatBN7.2	6	31,462,879 - 31,542,969 (+)	NCBI

RefSeq Acc Id:

XM_039111931 ⟹ XP_038967859

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI
mRatBN7.2	6	31,462,879 - 31,542,969 (+)	NCBI

RefSeq Acc Id:

XM_039111936 ⟹ XP_038967864

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI
mRatBN7.2	6	31,462,879 - 31,542,969 (+)	NCBI

RefSeq Acc Id:

XM_039111938 ⟹ XP_038967866

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI
mRatBN7.2	6	31,462,879 - 31,542,969 (+)	NCBI

RefSeq Acc Id:

XM_039111939 ⟹ XP_038967867

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI
mRatBN7.2	6	31,462,879 - 31,542,969 (+)	NCBI

RefSeq Acc Id:

XM_063261633 ⟹ XP_063117703

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,493 - 37,262,223 (+)	NCBI

RefSeq Acc Id:

XM_063261634 ⟹ XP_063117704

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI

RefSeq Acc Id:

XM_063261635 ⟹ XP_063117705

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,499 - 37,262,223 (+)	NCBI

RefSeq Acc Id:

XM_063261636 ⟹ XP_063117706

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,197 - 37,262,223 (+)	NCBI

RefSeq Acc Id:

XM_063261637 ⟹ XP_063117707

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,197 - 37,262,223 (+)	NCBI

RefSeq Acc Id:

XM_063261638 ⟹ XP_063117708

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI

RefSeq Acc Id:

XM_063261639 ⟹ XP_063117709

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,499 - 37,262,223 (+)	NCBI

RefSeq Acc Id:

XM_063261640 ⟹ XP_063117710

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,499 - 37,262,223 (+)	NCBI

RefSeq Acc Id:

XM_063261641 ⟹ XP_063117711

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,499 - 37,262,223 (+)	NCBI

RefSeq Acc Id:

XM_063261642 ⟹ XP_063117712

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,182,130 - 37,262,223 (+)	NCBI

RefSeq Acc Id:

XM_063261643 ⟹ XP_063117713

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,215,743 - 37,262,223 (+)	NCBI

RefSeq Acc Id:

XM_063261644 ⟹ XP_063117714

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	37,215,743 - 37,262,223 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100185	(Get FASTA)	NCBI Sequence Viewer
	NP_001421159	(Get FASTA)	NCBI Sequence Viewer
	NP_001421160	(Get FASTA)	NCBI Sequence Viewer
	NP_001421161	(Get FASTA)	NCBI Sequence Viewer
	NP_001421162	(Get FASTA)	NCBI Sequence Viewer
	NP_001421163	(Get FASTA)	NCBI Sequence Viewer
	NP_001421164	(Get FASTA)	NCBI Sequence Viewer
	NP_001421165	(Get FASTA)	NCBI Sequence Viewer
	NP_001421166	(Get FASTA)	NCBI Sequence Viewer
	NP_001421167	(Get FASTA)	NCBI Sequence Viewer
	NP_001421168	(Get FASTA)	NCBI Sequence Viewer
	NP_001421169	(Get FASTA)	NCBI Sequence Viewer
	NP_001421170	(Get FASTA)	NCBI Sequence Viewer
	NP_001421171	(Get FASTA)	NCBI Sequence Viewer
	XP_006239941	(Get FASTA)	NCBI Sequence Viewer
	XP_006239942	(Get FASTA)	NCBI Sequence Viewer
	XP_006239945	(Get FASTA)	NCBI Sequence Viewer
	XP_017449562	(Get FASTA)	NCBI Sequence Viewer
	XP_038967852	(Get FASTA)	NCBI Sequence Viewer
	XP_038967853	(Get FASTA)	NCBI Sequence Viewer
	XP_038967856	(Get FASTA)	NCBI Sequence Viewer
	XP_038967858	(Get FASTA)	NCBI Sequence Viewer
	XP_038967859	(Get FASTA)	NCBI Sequence Viewer
	XP_038967864	(Get FASTA)	NCBI Sequence Viewer
	XP_038967866	(Get FASTA)	NCBI Sequence Viewer
	XP_038967867	(Get FASTA)	NCBI Sequence Viewer
	XP_063117703	(Get FASTA)	NCBI Sequence Viewer
	XP_063117704	(Get FASTA)	NCBI Sequence Viewer
	XP_063117705	(Get FASTA)	NCBI Sequence Viewer
	XP_063117706	(Get FASTA)	NCBI Sequence Viewer
	XP_063117707	(Get FASTA)	NCBI Sequence Viewer
	XP_063117708	(Get FASTA)	NCBI Sequence Viewer
	XP_063117709	(Get FASTA)	NCBI Sequence Viewer
	XP_063117710	(Get FASTA)	NCBI Sequence Viewer
	XP_063117711	(Get FASTA)	NCBI Sequence Viewer
	XP_063117712	(Get FASTA)	NCBI Sequence Viewer
	XP_063117713	(Get FASTA)	NCBI Sequence Viewer
	XP_063117714	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM03077	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000008359
	ENSRNOP00000008359.5
	ENSRNOP00000074592
	ENSRNOP00000074592.3
	ENSRNOP00000081323
	ENSRNOP00000081323.2
	ENSRNOP00000089681.1
	ENSRNOP00000107432
	ENSRNOP00000107432.1

RefSeq Acc Id:

NP_001100185 ⟸ NM_001106715

- UniProtKB:

D3ZQL8 (UniProtKB/TrEMBL), A6HAM2 (UniProtKB/TrEMBL), A0A8I6AD36 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNHDFQALALESRGMGELLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGTSHHSMSQPIMVQ
RRSGQSFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGTFGTRDAETDGPEK
GDQKGKASPFEEDQNRDLKQDDEDSKINGRGLPNGMDADCKDFNRTPGSRQASPTEVVERLGPS
TNPPEGLGPLPNPTANKPLVEEFSNPETQNLDAMDQVGLDSLQFDYPGNQVPMDSSGATVGLFD
YNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGT
DPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAASNTANQQAASQAQPGQQQV
LRPGAGQRPITPSQGQQGQQAESLAAAAAANPTLAFGQSLAAGMPGYQVLAPTAYYDQTGALVV
GPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAAGGTANSLTGSTNGLFRPIGTQPPQQQQQ
QQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSASLGFGSGSSLGAAIGSALSGFGSSVG
SSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPP
SLSSHGSSSRGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGR
SRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEIVQAAYQLM
TDVFGNYVIQKFFEFGSLDQKLALANRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKEL
DGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ
TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC
VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHIT
TLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGML

hide sequence

RefSeq Acc Id:

XP_006239941 ⟸ XM_006239879

- Peptide Label:

isoform X1

- Sequence:

show sequence

MNHDFQALALESRGMGELLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGTSHHSMSQPIMVQ
RRSGQSFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGTFGTRDAETDGPEK
GDQKGKASPFEEDQNRDLKQDDEDSKINGRGLPNGMDADCKDFNRTPGSRQASPTEVVERLGPS
TNPPEGLGPLPNPTANKPLVEEFSNPETQNLDAMDQVGLDSLQFDYPGNQVPMDSSGATVGLFD
YNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGT
DPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAASNTANQQAASQAQPGQQQV
LRPGAGQRPITPSQGQQGQQAESLAAAAAANPTLAFGQSLAAGMPGYQVLAPTAYYDQTGALVV
GPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAAGGTANSLTGSTNGLFRPIGTQPPQQQQQ
QQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSASLGFGSGSSLGAAIGSALSGFGSSVG
SSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPP
SLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIM
PSGRSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEIVQAA
YQLMTDVFGNYVIQKFFEFGSLDQKLALANRIRGHVLPLALQMYGCRVIQKALESISSDQQVIS
EMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILE
HCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFAS
NVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHK
IRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGML

hide sequence

RefSeq Acc Id:

XP_006239942 ⟸ XM_006239880

- Peptide Label:

isoform X8

- Sequence:

show sequence

MNHDFQALALESRGMGELLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGTSHHSMSQPIMVQ
RRSGQSFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGTFGTRDAETDGPEK
GDQKGKASPFEEDQNRDLKQDDEDSKINGRGLPNGMDADCKDFNRTPGSRQASPTEVVERLGPS
TNPPEGLGPLPNPTANKPLVEEFSNPETQNLDAMDQVGLDSLQFDYPGNQVPMDSSGATVGLFD
YNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGT
DPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAASNTANQQAASQAQPGQQQV
LRPGAGQRPITPSQGQQGQQAESLAAAAAANPTLAFGQSLAAGMPGYQVLAPTAYYDQTGALVV
GPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAAGGTANSLTGSTNGLFRPIGTQPPQQQQQ
QQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSASLGFGSGSSLGAAIGSALSGFGSSVG
SSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPP
SLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIM
PSGRSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEIVQAA
YQLMTDVFGNYVIQKFFEFGSLDQKLALANRIRGHVLPLALQMYGCRVIQKALESISSDQQSEM
VKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHC
TAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV
VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIR
PHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGML

hide sequence

RefSeq Acc Id:

XP_006239945 ⟸ XM_006239883

- Peptide Label:

isoform X15

- Sequence:

show sequence

MNHDFQALALESRGMGELLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGTSHHSMSQPIMVQ
RRSGQSFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGTFGTRDAETDGPEK
GDQKGKASPFEEDQNRDLKQDDEDSKINGRGLPNGMDADCKDFNRTPGSRQASPTEVVERLGPS
TNPPEGLGPLPNPTANKPLVEEFSNPETQNLDAMDQVGLDSLQFDYPGNQVPMDSSGATVGLFD
YNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGT
DPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAASNTANQQAASQAQPGQQQV
LRPGAGQRPITPSQGQQGQQAESLAAAAAANPTLAFGQSLAAGMPGYQVLAPTAYYDQTGALVV
GPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAAGGTANSLTGSTNGLFRPIGTQPPQQQQQ
QQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSASLGFGSGSSLGAAIGSALSGFGSSGG
LTNGSGRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRLLEDFRNNR
FPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEIVQAAYQLMTDVFGNYVIQK
FFEFGSLDQKLALANRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQ
NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQH
TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERAL
LIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHI
LAKLEKYYLKNSPDLGPIGGPPNGML

hide sequence

RefSeq Acc Id:

XP_017449562 ⟸ XM_017594073

- Peptide Label:

isoform X10

- Sequence:

show sequence

MNHDFQALALESRGMGELLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGTSHHSMSQPIMVQ
RRSGQSFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGTFGTRDAETDGPEK
GDQKGKASPFEEDQNRDLKQDDEDSKINGRGLPNGMDADCKDFNRTPGSRQASPTEVVERLGPS
TNPPEGLGPLPNPTANKPLVEEFSNPETQNLDAMDQVGLDSLQFDYPGNQVPMDSSGATVGLFD
YNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGT
DPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAASNTANQQAASQAQPGQQQV
LRPGAGQRPITPSQGQQGQQAESLAAAAAANPTLAFGQSLAAGMPGYQVLAPTAYYDQTGALVV
GPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAAGGTANSLTGSTNGLFRPIGTQPPQQQQQ
QQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSASLGFGSGSSLGAAIGSALSGFGSSGG
LTNGSGRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRLLEDFRNNR
FPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEIVQAAYQLMTDVFGNYVIQK
FFEFGSLDQKLALANRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVK
DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELH
QHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER
ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGK
HILAKLEKYYLKNSPDLGPIGGPPNGML

hide sequence

Ensembl Acc Id:

ENSRNOP00000074592 ⟸ ENSRNOT00000082598

Ensembl Acc Id:

ENSRNOP00000008359 ⟸ ENSRNOT00000008359

RefSeq Acc Id:	XP_038967852 ⟸ XM_039111924
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AD36 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967853 ⟸ XM_039111925
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038967864 ⟸ XM_039111936
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_038967866 ⟸ XM_039111938
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_038967856 ⟸ XM_039111928
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038967867 ⟸ XM_039111939
- Peptide Label:	isoform X13

RefSeq Acc Id:	XP_038967858 ⟸ XM_039111930
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6AD36 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967859 ⟸ XM_039111931
- Peptide Label:	isoform X7

Ensembl Acc Id:

ENSRNOP00000081323 ⟸ ENSRNOT00000108134

Ensembl Acc Id:

ENSRNOP00000089681 ⟸ ENSRNOT00000095958

RefSeq Acc Id:	XP_063117704 ⟸ XM_063261634
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063117708 ⟸ XM_063261638
- Peptide Label:	isoform X14

RefSeq Acc Id:	XP_063117712 ⟸ XM_063261642
- Peptide Label:	isoform X16

RefSeq Acc Id:	XP_063117706 ⟸ XM_063261636
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I6AD36 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117707 ⟸ XM_063261637
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I6AD36 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117703 ⟸ XM_063261633
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K8F9 (UniProtKB/TrEMBL), A0A8I6AD36 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117705 ⟸ XM_063261635
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6AD36 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117709 ⟸ XM_063261639
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_063117711 ⟸ XM_063261641
- Peptide Label:	isoform X15
- UniProtKB:	A0A8I5ZSK1 (UniProtKB/TrEMBL), A0A8I6AD36 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117710 ⟸ XM_063261640
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063117713 ⟸ XM_063261643
- Peptide Label:	isoform X17

RefSeq Acc Id:	XP_063117714 ⟸ XM_063261644
- Peptide Label:	isoform X18

Ensembl Acc Id:

ENSRNOP00000107432 ⟸ ENSRNOT00000161902

Protein Domains

PUM-HD

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZQL8-F1-model_v2	AlphaFold	D3ZQL8	1-1061	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694489

Promoter ID:

EPDNEW_R5009

Type:

initiation region

Name:

Pum2_1

Description:

pumilio RNA-binding family member 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	6	33,786,239 - 33,786,299	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311024	AgrOrtholog
BioCyc Gene	G2FUF-38176	BioCyc
Ensembl Genes	ENSRNOG00000006180	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000008359	ENTREZGENE
	ENSRNOT00000008359.8	UniProtKB/TrEMBL
	ENSRNOT00000082598	ENTREZGENE
	ENSRNOT00000082598.3	UniProtKB/TrEMBL
	ENSRNOT00000095958.2	UniProtKB/TrEMBL
	ENSRNOT00000108134	ENTREZGENE
	ENSRNOT00000108134.2	UniProtKB/TrEMBL
	ENSRNOT00000161902	ENTREZGENE
	ENSRNOT00000161902.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	PUM-HD	UniProtKB/TrEMBL
	Pumilio_RNA-bd	UniProtKB/TrEMBL
	Pumilio_RNA-bd_rpt	UniProtKB/TrEMBL
KEGG Report	rno:298874	UniProtKB/TrEMBL
NCBI Gene	298874	ENTREZGENE
PANTHER	PUMILIO HOMOLOG 2	UniProtKB/TrEMBL
	RNA BINDING PROTEIN PUMILIO-RELATED	UniProtKB/TrEMBL
Pfam	PUF	UniProtKB/TrEMBL
PhenoGen	Pum2	PhenoGen
PROSITE	PUM	UniProtKB/TrEMBL
	PUM_HD	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000006180	RatGTEx
SMART	Pumilio	UniProtKB/TrEMBL
Superfamily-SCOP	ARM-type_fold	UniProtKB/TrEMBL
UniProt	A0A0G2K8F9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZSK1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AD36	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LAE0_RAT	UniProtKB/TrEMBL
	A6HAM2	ENTREZGENE, UniProtKB/TrEMBL
	D3ZQL8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-11-19	Pum2	pumilio RNA-binding family member 2	Pum2	pumilio homolog 2 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-11-20	Pum2	pumilio homolog 2 (Drosophila)	Pum2	pumilio 2 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	Pum2	pumilio 2 (Drosophila)	Pum2_predicted	pumilio 2 (Drosophila) (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Pum2_predicted	pumilio 2 (Drosophila) (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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