Mpv17 (mitochondrial inner membrane protein MPV17) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Mpv17 (mitochondrial inner membrane protein MPV17) Rattus norvegicus
Analyze
Symbol: Mpv17
Name: mitochondrial inner membrane protein MPV17
RGD ID: 1310512
Description: Predicted to enable channel activity. Predicted to be involved in several processes, including cellular response to reactive oxygen species; glomerular basement membrane development; and regulation of mitochondrial DNA metabolic process. Predicted to act upstream of or within reactive oxygen species metabolic process and sensory perception of sound. Predicted to be located in mitochondrial inner membrane and peroxisome. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 2EE and mitochondrial DNA depletion syndrome 6. Orthologous to human MPV17 (mitochondrial inner membrane protein MPV17); INTERACTS WITH atrazine; bisphenol A; paracetamol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC360463; MpV17 mitochondrial inner membrane protein; MPV17 mitochondrial membrane protein-like; Mpv17 transgene, kidney disease mutant-like; Mpv17l
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8630,941,693 - 30,956,389 (+)NCBIGRCr8
mRatBN7.2625,221,668 - 25,236,241 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl625,222,896 - 25,236,244 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx625,523,972 - 25,537,065 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0625,839,865 - 25,852,958 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0625,318,528 - 25,331,843 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0626,585,713 - 26,600,265 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl626,587,443 - 26,599,511 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0636,403,896 - 36,416,645 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4625,200,452 - 25,214,909 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1101,655,564 - 1,672,677 (+)NCBI
Celera624,714,225 - 24,727,365 (+)NCBICelera
Cytogenetic Map6q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function
channel activity  (IBA,IEA,ISO,ISS)
protein binding  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7957077   PMID:12477932   PMID:16041630   PMID:16582910   PMID:18614015   PMID:25861990   PMID:26123482   PMID:26760297  


Genomics

Comparative Map Data
Mpv17
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8630,941,693 - 30,956,389 (+)NCBIGRCr8
mRatBN7.2625,221,668 - 25,236,241 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl625,222,896 - 25,236,244 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx625,523,972 - 25,537,065 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0625,839,865 - 25,852,958 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0625,318,528 - 25,331,843 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0626,585,713 - 26,600,265 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl626,587,443 - 26,599,511 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0636,403,896 - 36,416,645 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4625,200,452 - 25,214,909 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1101,655,564 - 1,672,677 (+)NCBI
Celera624,714,225 - 24,727,365 (+)NCBICelera
Cytogenetic Map6q14NCBI
MPV17
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38227,309,492 - 27,323,097 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl227,309,492 - 27,325,680 (-)EnsemblGRCh38hg38GRCh38
GRCh37227,532,360 - 27,545,964 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36227,385,864 - 27,399,473 (-)NCBINCBI36Build 36hg18NCBI36
Build 34227,444,012 - 27,457,082NCBI
Celera227,379,464 - 27,393,076 (-)NCBICelera
Cytogenetic Map2p23.3NCBI
HuRef227,274,582 - 27,288,152 (-)NCBIHuRef
CHM1_1227,462,306 - 27,475,919 (-)NCBICHM1_1
T2T-CHM13v2.0227,351,915 - 27,365,520 (-)NCBIT2T-CHM13v2.0
Mpv17
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39531,298,007 - 31,311,595 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl531,297,998 - 31,311,595 (-)EnsemblGRCm39 Ensembl
GRCm38531,140,663 - 31,154,251 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl531,140,654 - 31,154,251 (-)EnsemblGRCm38mm10GRCm38
MGSCv37531,443,033 - 31,456,615 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36531,417,529 - 31,430,812 (-)NCBIMGSCv36mm8
Celera528,619,571 - 28,633,245 (-)NCBICelera
Cytogenetic Map5B1NCBI
cM Map517.12NCBI
Mpv17
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554699,279,540 - 9,291,954 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554699,279,540 - 9,292,012 (-)NCBIChiLan1.0ChiLan1.0
MPV17
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21299,189,334 - 99,202,979 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A99,193,303 - 99,206,947 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A27,311,551 - 27,325,249 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A27,399,258 - 27,412,747 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A27,399,258 - 27,414,090 (-)Ensemblpanpan1.1panPan2
MPV17
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11721,280,523 - 21,290,967 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1721,281,361 - 21,290,339 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1721,172,324 - 21,182,712 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01721,601,802 - 21,612,194 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1721,601,804 - 21,612,150 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11721,288,497 - 21,298,885 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01721,297,995 - 21,308,610 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01721,346,222 - 21,356,615 (-)NCBIUU_Cfam_GSD_1.0
Mpv17
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629265,580,429 - 65,593,085 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364935,248,059 - 5,258,147 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364935,246,803 - 5,258,147 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MPV17
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3111,821,690 - 111,833,928 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13111,823,075 - 111,833,929 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MPV17
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11480,289,285 - 80,302,838 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604531,849,129 - 31,863,229 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mpv17
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247389,395,416 - 9,407,223 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247389,395,315 - 9,411,904 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mpv17
75 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:34
Count of miRNA genes:31
Interacting mature miRNAs:34
Transcripts:ENSRNOT00000034207
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
738023Alc17Alcohol consumption QTL 173.10.003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)6127574569Rat
1354616Despr12Despair related QTL 120.0012locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)6127574569Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
2300176Bmd51Bone mineral density QTL 5111.70.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)6127574569Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449734434305Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62033877762613667Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
1359023Bp272Blood pressure QTL 2722.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)61653614027261739Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)61653614071636405Rat
2300190Bmd52Bone mineral density QTL 5211.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)6127574569Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001098240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC091193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000034207   ⟹   ENSRNOP00000037647
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl625,222,896 - 25,232,622 (+)Ensembl
Rnor_6.0 Ensembl626,587,443 - 26,599,511 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000095043   ⟹   ENSRNOP00000079234
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl625,222,896 - 25,235,539 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099208   ⟹   ENSRNOP00000091585
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl625,222,968 - 25,236,244 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000102606   ⟹   ENSRNOP00000092589
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl625,222,968 - 25,236,244 (+)Ensembl
RefSeq Acc Id: NM_001098240   ⟹   NP_001091710
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,943,110 - 30,956,207 (+)NCBI
mRatBN7.2625,223,143 - 25,236,241 (+)NCBI
Rnor_6.0626,587,192 - 26,600,265 (+)NCBI
Rnor_5.0636,403,896 - 36,416,645 (+)NCBI
RGSC_v3.4625,200,452 - 25,214,909 (+)RGD
Celera624,714,225 - 24,727,365 (+)RGD
Sequence:
RefSeq Acc Id: XM_039112437   ⟹   XP_038968365
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,941,693 - 30,956,389 (+)NCBI
mRatBN7.2625,222,983 - 25,236,241 (+)NCBI
RefSeq Acc Id: XM_039112438   ⟹   XP_038968366
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,941,693 - 30,956,389 (+)NCBI
mRatBN7.2625,222,983 - 25,236,241 (+)NCBI
RefSeq Acc Id: XM_039112439   ⟹   XP_038968367
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,943,358 - 30,956,389 (+)NCBI
mRatBN7.2625,231,067 - 25,236,241 (+)NCBI
RefSeq Acc Id: XM_039112440   ⟹   XP_038968368
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,941,699 - 30,956,389 (+)NCBI
mRatBN7.2625,221,668 - 25,236,241 (+)NCBI
RefSeq Acc Id: XM_039112441   ⟹   XP_038968369
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,941,698 - 30,956,389 (+)NCBI
mRatBN7.2625,221,668 - 25,236,241 (+)NCBI
RefSeq Acc Id: XM_039112443   ⟹   XP_038968371
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,941,698 - 30,956,389 (+)NCBI
mRatBN7.2625,222,983 - 25,236,241 (+)NCBI
RefSeq Acc Id: XM_039112444   ⟹   XP_038968372
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,941,693 - 30,956,389 (+)NCBI
mRatBN7.2625,221,668 - 25,236,241 (+)NCBI
RefSeq Acc Id: XM_039112445   ⟹   XP_038968373
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,941,693 - 30,956,389 (+)NCBI
mRatBN7.2625,222,983 - 25,236,241 (+)NCBI
RefSeq Acc Id: XM_063262038   ⟹   XP_063118108
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,941,693 - 30,956,389 (+)NCBI
RefSeq Acc Id: XM_063262039   ⟹   XP_063118109
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,941,694 - 30,956,389 (+)NCBI
RefSeq Acc Id: XM_063262040   ⟹   XP_063118110
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,941,694 - 30,956,389 (+)NCBI
RefSeq Acc Id: XM_063262041   ⟹   XP_063118111
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,941,699 - 30,956,389 (+)NCBI
RefSeq Acc Id: XM_063262042   ⟹   XP_063118112
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,941,693 - 30,956,389 (+)NCBI
RefSeq Acc Id: XM_063262043   ⟹   XP_063118113
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,941,699 - 30,956,389 (+)NCBI
RefSeq Acc Id: NP_001091710   ⟸   NM_001098240
- UniProtKB: Q5BK62 (UniProtKB/Swiss-Prot),   A6HA73 (UniProtKB/TrEMBL),   A0A8I6ADY6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000037647   ⟸   ENSRNOT00000034207
RefSeq Acc Id: XP_038968369   ⟸   XM_039112441
- Peptide Label: isoform X4
- UniProtKB: Q5BK62 (UniProtKB/Swiss-Prot),   A6HA73 (UniProtKB/TrEMBL),   A0A8I6ADY6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968368   ⟸   XM_039112440
- Peptide Label: isoform X4
- UniProtKB: Q5BK62 (UniProtKB/Swiss-Prot),   A6HA73 (UniProtKB/TrEMBL),   A0A8I6ADY6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968372   ⟸   XM_039112444
- Peptide Label: isoform X5
- UniProtKB: A0A8I6GJS1 (UniProtKB/TrEMBL),   A0A8I6ADY6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968365   ⟸   XM_039112437
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038968366   ⟸   XM_039112438
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038968371   ⟸   XM_039112443
- Peptide Label: isoform X4
- UniProtKB: Q5BK62 (UniProtKB/Swiss-Prot),   A6HA73 (UniProtKB/TrEMBL),   A0A8I6ADY6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968373   ⟸   XM_039112445
- Peptide Label: isoform X5
- UniProtKB: A0A8I6GJS1 (UniProtKB/TrEMBL),   A0A8I6ADY6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968367   ⟸   XM_039112439
- Peptide Label: isoform X3
- UniProtKB: A0A8I6ADY6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000092589   ⟸   ENSRNOT00000102606
Ensembl Acc Id: ENSRNOP00000091585   ⟸   ENSRNOT00000099208
Ensembl Acc Id: ENSRNOP00000079234   ⟸   ENSRNOT00000095043
RefSeq Acc Id: XP_063118108   ⟸   XM_063262038
- Peptide Label: isoform X5
- UniProtKB: A0A8I6GJS1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118112   ⟸   XM_063262042
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063118110   ⟸   XM_063262040
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063118109   ⟸   XM_063262039
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063118113   ⟸   XM_063262043
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063118111   ⟸   XM_063262041
- Peptide Label: isoform X7

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5BK62-F1-model_v2 AlphaFold Q5BK62 1-176 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694445
Promoter ID:EPDNEW_R4969
Type:single initiation site
Name:Mpv17_1
Description:MpV17 mitochondrial inner membrane protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0626,587,428 - 26,587,488EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310512 AgrOrtholog
BioCyc Gene G2FUF-38347 BioCyc
Ensembl Genes ENSRNOG00000049430 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000034207.5 UniProtKB/TrEMBL
  ENSRNOT00000095043.1 UniProtKB/TrEMBL
  ENSRNOT00000099208.1 UniProtKB/TrEMBL
  ENSRNOT00000102606.1 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7373705 IMAGE-MGC_LOAD
InterPro Mpv17_PMP22 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:360463 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:108867 IMAGE-MGC_LOAD
NCBI Gene 360463 ENTREZGENE
PANTHER PROTEIN MPV17 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11266 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Mpv17_PMP22 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mpv17 PhenoGen
RatGTEx ENSRNOG00000049430 RatGTEx
UniProt A0A8I5ZME0_RAT UniProtKB/TrEMBL
  A0A8I6ADY6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GJS1 ENTREZGENE, UniProtKB/TrEMBL
  A6HA73 ENTREZGENE, UniProtKB/TrEMBL
  F1LNG8_RAT UniProtKB/TrEMBL
  MPV17_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-08-27 Mpv17  mitochondrial inner membrane protein MPV17  Mpv17  MpV17 mitochondrial inner membrane protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-08-29 Mpv17  MpV17 mitochondrial inner membrane protein  Mpv17l  MPV17 mitochondrial membrane protein-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-04-23 Mpv17l  MPV17 mitochondrial membrane protein-like  Mpv17l  Mpv17 transgene, kidney disease mutant-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-11-11 Mpv17l  Mpv17 transgene, kidney disease mutant-like  Mpv17l  MPV17 mitochondrial membrane protein-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-25 Mpv17l  MPV17 mitochondrial membrane protein-like  Mpv17l  Mpv17 transgene, kidney disease mutant-like   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Mpv17l  Mpv17 transgene, kidney disease mutant-like   Mpv17l_predicted  Mpv17 transgene, kidney disease mutant-like (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Mpv17l_predicted  Mpv17 transgene, kidney disease mutant-like (predicted)      Symbol and Name status set to approved 70820 APPROVED