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Gene-Chemical Interaction Annotations
Click to see Annotation Detail View
References
References - curated
Genomics
Variants
miRNA Target Status (No longer updated)
Predicted Target Of
Summary Value | Count of predictions: | 71 | Count of miRNA genes: | 58 | Interacting mature miRNAs: | 60 | Transcripts: | ENSRNOT00000012418, ENSRNOT00000020381 | Prediction methods: | Miranda, Rnahybrid | Result types: | miRGate_prediction | |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
QTLs in Region (GRCr8)
The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
Markers in Region
Gabpb1 |
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Expression
RNA-SEQ Expression
alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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musculoskeletal system
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nervous system
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renal system
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reproductive system
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respiratory system
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sensory system
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visual system
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16 | 11 | 66 | 164 | 91 | 90 | 59 | 88 | 59 | 6 | 350 | 186 | 9 | 143 | 81 | 92 | 31 | 17 | 17 |
Sequence
Nucleotide Sequences
RefSeq Transcripts | NM_001135015 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
GenBank Nucleotide | JAXUCZ010000017 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000081052 ⟹ ENSRNOP00000073366 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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RefSeq Acc Id: | NM_001135015 ⟹ NP_001128487 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NP_001128487 ⟸ NM_001135015 |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000073366 ⟸ ENSRNOT00000081052 |