Ndufa2 (NADH:ubiquinone oxidoreductase subunit A2) - Rat Genome Database

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Gene: Ndufa2 (NADH:ubiquinone oxidoreductase subunit A2) Rattus norvegicus
Analyze
Symbol: Ndufa2
Name: NADH:ubiquinone oxidoreductase subunit A2
RGD ID: 1309997
Description: Predicted to act upstream of or within blastocyst hatching. Predicted to be located in mitochondrial membrane. Predicted to be part of respiratory chain complex I. Predicted to be active in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 13. Orthologous to human NDUFA2 (NADH:ubiquinone oxidoreductase subunit A2); PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC291660; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81828,629,795 - 28,631,884 (-)NCBIGRCr8
mRatBN7.21828,355,774 - 28,357,863 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1828,355,774 - 28,358,076 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1828,482,924 - 28,485,013 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01829,244,998 - 29,247,087 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01828,580,226 - 28,582,315 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01829,585,671 - 29,587,760 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1829,585,671 - 29,587,760 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01829,289,478 - 29,291,567 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41829,441,774 - 29,443,863 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11829,468,442 - 29,470,480 (-)NCBI
Celera1828,076,327 - 28,078,416 (-)NCBICelera
Cytogenetic Map18p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-dexrazoxane  (ISO)
(+)-schisandrin B  (EXP)
1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene  (ISO)
1,2-dimethylhydrazine  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
1-nitropyrene  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,4'-trichlorobiphenyl  (ISO)
2-hydroxypropanoic acid  (ISO)
3-methyladenine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
5-methyl-4-oxido-2-pyrazin-4-iumcarboxylic acid  (ISO)
acetamide  (EXP)
alpha-Zearalanol  (EXP)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
CGP 52608  (ISO)
chloropicrin  (ISO)
chlorpyrifos  (ISO)
clobetasol  (ISO)
cobalt dichloride  (EXP,ISO)
copper(II) sulfate  (ISO)
corosolic acid  (ISO)
cyclosporin A  (ISO)
dicrotophos  (ISO)
disodium selenite  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
flutamide  (ISO)
folic acid  (ISO)
isoprenaline  (EXP)
ivermectin  (ISO)
melittin  (ISO)
nicotinamide  (EXP)
ochratoxin A  (ISO)
paracetamol  (ISO)
PCB138  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
phenethyl isothiocyanate  (ISO)
PhIP  (EXP)
phlorizin  (ISO)
pirinixic acid  (ISO)
rac-lactic acid  (ISO)
raloxifene  (ISO)
resveratrol  (EXP,ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
taurine  (ISO)
tetrachloroethene  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (EXP)
titanium dioxide  (ISO)
tolcapone  (EXP)
toluene  (EXP)
trichloroethene  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
tungsten  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Reduced Mitochondrial Activity is Early and Steady in the Entorhinal Cortex but it is Mainly Unmodified in the Frontal Cortex in Alzheimer's Disease. Armand-Ugon M, etal., Curr Alzheimer Res. 2017;14(12):1327-1334. doi: 10.2174/1567205014666170505095921.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12611891   PMID:14651853   PMID:17209039   PMID:18614015   PMID:27626371   PMID:27869233   PMID:28844695   PMID:34800366  


Genomics

Comparative Map Data
Ndufa2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81828,629,795 - 28,631,884 (-)NCBIGRCr8
mRatBN7.21828,355,774 - 28,357,863 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1828,355,774 - 28,358,076 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1828,482,924 - 28,485,013 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01829,244,998 - 29,247,087 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01828,580,226 - 28,582,315 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01829,585,671 - 29,587,760 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1829,585,671 - 29,587,760 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01829,289,478 - 29,291,567 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41829,441,774 - 29,443,863 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11829,468,442 - 29,470,480 (-)NCBI
Celera1828,076,327 - 28,078,416 (-)NCBICelera
Cytogenetic Map18p11NCBI
NDUFA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385140,645,285 - 140,647,630 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5140,638,740 - 140,647,771 (-)EnsemblGRCh38hg38GRCh38
GRCh375140,024,870 - 140,027,215 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365140,005,142 - 140,007,424 (-)NCBINCBI36Build 36hg18NCBI36
Build 345140,005,142 - 140,007,424NCBI
Celera5136,101,693 - 136,104,115 (-)NCBICelera
Cytogenetic Map5q31.3NCBI
HuRef5135,170,185 - 135,172,607 (-)NCBIHuRef
CHM1_15139,458,184 - 139,460,605 (-)NCBICHM1_1
T2T-CHM13v2.05141,170,692 - 141,173,036 (-)NCBIT2T-CHM13v2.0
Ndufa2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391836,875,385 - 36,877,640 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1836,875,385 - 36,877,610 (-)EnsemblGRCm39 Ensembl
GRCm381836,742,332 - 36,744,587 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1836,742,332 - 36,744,557 (-)EnsemblGRCm38mm10GRCm38
MGSCv371836,902,020 - 36,904,202 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361836,868,340 - 36,870,522 (-)NCBIMGSCv36mm8
Celera1837,194,431 - 37,196,613 (-)NCBICelera
Cytogenetic Map18B2NCBI
cM Map1819.46NCBI
Ndufa2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541852,952 - 55,060 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541852,952 - 55,060 (+)NCBIChiLan1.0ChiLan1.0
NDUFA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24135,903,192 - 135,905,375 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15134,042,742 - 134,044,926 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05136,010,029 - 136,012,373 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15142,126,686 - 142,129,126 (-)NCBIpanpan1.1PanPan1.1panPan2
NDUFA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1235,803,452 - 35,805,530 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl235,803,453 - 35,805,531 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha232,842,463 - 32,844,539 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0236,259,105 - 36,261,181 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl236,259,106 - 36,261,184 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1233,311,474 - 33,313,550 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0234,179,238 - 34,181,314 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0234,931,939 - 34,933,993 (-)NCBIUU_Cfam_GSD_1.0
Ndufa2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213152,022,657 - 152,024,365 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365319,587,139 - 9,589,007 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDUFA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2142,359,007 - 142,361,131 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12142,359,000 - 142,361,126 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22148,302,952 - 148,304,990 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NDUFA2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12343,278,488 - 43,280,852 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2343,278,551 - 43,280,847 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603434,603,674 - 34,606,039 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ndufa2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474333,398,027 - 33,400,271 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474333,398,027 - 33,400,346 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ndufa2
3 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:131
Count of miRNA genes:103
Interacting mature miRNAs:109
Transcripts:ENSRNOT00000023811
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
1331735Rf44Renal function QTL 442.981urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)181823456431359530Rat
61382Bp46Blood pressure QTL 4618.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194179131393320Rat
2301413Bp318Blood pressure QTL 3180.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182654808246969551Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
6903359Bp355Blood pressure QTL 3553.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194454459796478Rat
12904668Bw188Body weight QTL 1880.03body mass (VT:0001259)body weight (CMO:0000012)182654808246969551Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181495133759951337Rat
12904669Cm125Cardiac mass QTL 1250.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)182654808246969551Rat
1641923Colcr8Colorectal carcinoma resistance QTL 83.10.0014intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)182206624252293055Rat
12904670Cm126Cardiac mass QTL 1260.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)182654808246969551Rat
2312568Glom21Glomerulus QTL 2120.005kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)18518585840503530Rat
12904677Kidm72Kidney mass QTL 720.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)182654808246969551Rat
1331766Bp236Blood pressure QTL 2363.022arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181194429931359530Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)181800759963571040Rat
12904673Cm127Cardiac mass QTL 1270.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)182654808246969551Rat
12904675Am19Aortic mass QTL 190.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)182654808246969551Rat
631264Scl22Serum cholesterol level QTL 226.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)181194179131393320Rat
1331775Bp235Blood pressure QTL 2353.201arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181823456431359530Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182557098570570985Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181927890183218561Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181179151863636873Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18130558703Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134291613Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18420794160377792Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194429952293055Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134291613Rat
61375Bp41Blood pressure QTL 412.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)181194429941122201Rat

Markers in Region
RH131171  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21828,355,558 - 28,355,743 (+)MAPPERmRatBN7.2
Rnor_6.01829,585,456 - 29,585,640NCBIRnor6.0
Rnor_5.01829,289,263 - 29,289,447UniSTSRnor5.0
RGSC_v3.41829,441,559 - 29,441,743UniSTSRGSC3.4
Celera1828,076,112 - 28,076,296UniSTS
RH 3.4 Map18385.9UniSTS
Cytogenetic Map18p11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000023811   ⟹   ENSRNOP00000023811
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1828,355,774 - 28,357,863 (-)Ensembl
Rnor_6.0 Ensembl1829,585,671 - 29,587,760 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000118177   ⟹   ENSRNOP00000078265
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1828,355,774 - 28,358,076 (-)Ensembl
RefSeq Acc Id: NM_001106153   ⟹   NP_001099623
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81828,629,795 - 28,631,884 (-)NCBI
mRatBN7.21828,355,774 - 28,357,863 (-)NCBI
Rnor_6.01829,585,671 - 29,587,760 (-)NCBI
Rnor_5.01829,289,478 - 29,291,567 (-)NCBI
RGSC_v3.41829,441,774 - 29,443,863 (-)RGD
Celera1828,076,327 - 28,078,416 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001099623 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL76311 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000023811
  ENSRNOP00000023811.5
  ENSRNOP00000078265.1
RefSeq Acc Id: NP_001099623   ⟸   NM_001106153
- UniProtKB: D3ZS58 (UniProtKB/TrEMBL),   A6J329 (UniProtKB/TrEMBL),   A0A8I5ZKJ3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000023811   ⟸   ENSRNOT00000023811
Ensembl Acc Id: ENSRNOP00000078265   ⟸   ENSRNOT00000118177
Protein Domains
Ribosomal protein/NADH dehydrogenase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZS58-F1-model_v2 AlphaFold D3ZS58 1-97 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700728
Promoter ID:EPDNEW_R11252
Type:multiple initiation site
Name:Ndufa2_1
Description:NADH:ubiquinone oxidoreductase subunit A2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01829,587,741 - 29,587,801EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309997 AgrOrtholog
BioCyc Gene G2FUF-7862 BioCyc
BioCyc Pathway PWY-3781 [aerobic respiration I (cytochrome c)] BioCyc
BioCyc Pathway Image PWY-3781 BioCyc
Ensembl Genes ENSRNOG00000017571 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000023811 ENTREZGENE
  ENSRNOT00000023811.6 UniProtKB/TrEMBL
  ENSRNOT00000118177.1 UniProtKB/TrEMBL
Gene3D-CATH Glutaredoxin UniProtKB/TrEMBL
InterPro NADH_Ub_cplx-1_asu_su-2 UniProtKB/TrEMBL
  Ribosome/NADH_DH UniProtKB/TrEMBL
  Thioredoxin-like_sf UniProtKB/TrEMBL
KEGG Report rno:291660 UniProtKB/TrEMBL
NCBI Gene 291660 ENTREZGENE
PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 2 UniProtKB/TrEMBL
  PTHR12878 UniProtKB/TrEMBL
Pfam L51_S25_CI-B8 UniProtKB/TrEMBL
PhenoGen Ndufa2 PhenoGen
PIRSF NDUA2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000017571 RatGTEx
SMART L51_S25_CI-B8 UniProtKB/TrEMBL
Superfamily-SCOP Thiordxn-like_fd UniProtKB/TrEMBL
UniProt A0A8I5ZKJ3 ENTREZGENE, UniProtKB/TrEMBL
  A6J329 ENTREZGENE, UniProtKB/TrEMBL
  D3ZS58 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-17 Ndufa2  NADH:ubiquinone oxidoreductase subunit A2  Ndufa2  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Ndufa2  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2   Ndufa2_predicted  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Ndufa2_predicted  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2 (predicted)      Symbol and Name status set to approved 70820 APPROVED