Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Thap12 (THAP domain containing 12) Rattus norvegicus
Analyze
Symbol: Thap12
Name: THAP domain containing 12
Description: Predicted to have DNA binding activity and protein dimerization activity. Predicted to localize to nucleus. Orthologous to human THAP12 (THAP domain containing 12); INTERACTS WITH 2,4-dinitrotoluene; 4-amino-2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 52 kDa repressor of the inhibitor of the protein kinase; LOC308845; Prkrir; protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
Orthologs:
Homo sapiens (human) : THAP12 (THAP domain containing 12)  HGNC  Alliance
Mus musculus (house mouse) : Thap12 (THAP domain containing 12)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Thap12 (THAP domain containing 12)
Pan paniscus (bonobo/pygmy chimpanzee) : THAP12 (THAP domain containing 12)
Canis lupus familiaris (dog) : THAP12 (THAP domain containing 12)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Thap12 (THAP domain containing 12)
Sus scrofa (pig) : THAP12 (THAP domain containing 12)
Chlorocebus sabaeus (African green monkey) : THAP12 (THAP domain containing 12)
Heterocephalus glaber (naked mole-rat) : Thap12 (THAP domain containing 12)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01163,663,090 - 163,679,191 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1163,663,407 - 163,679,191 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01169,866,610 - 169,882,330 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41155,982,782 - 155,998,561 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11156,061,249 - 156,076,349 (+)NCBI
Celera1151,091,735 - 151,107,511 (+)NCBICelera
Cytogenetic Map1q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Thap12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309679
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.