Dlx1 (distal-less homeobox 1) - Rat Genome Database

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Pathways
Gene: Dlx1 (distal-less homeobox 1) Rattus norvegicus
Analyze
Symbol: Dlx1
Name: distal-less homeobox 1
RGD ID: 1309593
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in several processes, including negative regulation of cellular response to growth factor stimulus; regulation of neuron differentiation; and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including forebrain development; negative regulation of Notch signaling pathway; and negative regulation of oligodendrocyte differentiation. Predicted to be located in cytosol and nucleoplasm. Orthologous to human DLX1 (distal-less homeobox 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: homeobox Dlx1; homeobox protein DLX-1; LOC296500; MGC189409
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8376,763,864 - 76,768,454 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl376,763,500 - 76,768,447 (+)EnsemblGRCr8
mRatBN7.2356,356,190 - 56,360,780 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl356,356,190 - 56,360,780 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx359,754,121 - 59,758,700 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0368,337,729 - 68,342,308 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0366,099,889 - 66,104,437 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0358,164,931 - 58,169,521 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl358,164,931 - 58,169,521 (+)Ensemblrn6Rnor6.0
Rnor_5.0364,650,292 - 64,654,882 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4353,837,052 - 53,841,642 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera355,903,832 - 55,908,422 (+)NCBICelera
RGSC_v3.1353,733,423 - 53,738,014 (+)NCBI
Cytogenetic Map3q23NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
cell differentiation  (IEA)
cellular response to BMP stimulus  (IEA,ISO,ISS)
cellular response to transforming growth factor beta stimulus  (IEA,ISO,ISS)
cerebral cortex GABAergic interneuron differentiation  (IEA,ISO)
cerebral cortex GABAergic interneuron fate commitment  (IEA,ISO)
embryonic skeletal system development  (IEA,ISO)
forebrain neuron differentiation  (IEA,ISO)
forebrain neuron fate commitment  (ISO)
GABAergic neuron differentiation  (IEA,ISO)
hippocampus development  (IEA,ISO)
negative regulation of BMP signaling pathway  (IEA,ISO,ISS)
negative regulation of cellular response to transforming growth factor beta stimulus  (IEA,ISO,ISS)
negative regulation of neuron apoptotic process  (IEA,ISO)
negative regulation of Notch signaling pathway  (IEA,ISO)
negative regulation of oligodendrocyte differentiation  (IEA,ISO)
negative regulation of photoreceptor cell differentiation  (IEA,ISO,ISS)
negative regulation of transcription by RNA polymerase II  (IEA,ISO,ISS)
neuroblast differentiation  (IEA,ISO)
neuron apoptotic process  (IEA,ISO)
Notch signaling pathway  (IEA,ISO)
odontogenesis of dentin-containing tooth  (IEA,ISO)
oligodendrocyte differentiation  (IEA,ISO)
positive regulation of amacrine cell differentiation  (IEA,ISO,ISS)
positive regulation of cell differentiation  (IEA,ISO,ISS)
positive regulation of transcription by RNA polymerase II  (IEA,ISO,ISS)
proximal/distal pattern formation  (IEA,ISO)
regulation of DNA-templated transcription  (IEA)
regulation of transcription by RNA polymerase II  (IEA,ISO)
subpallium development  (IEA,ISO)

Cellular Component
cytosol  (IEA,ISO)
nucleoplasm  (IEA,ISO)
nucleus  (IEA,ISO,ISS)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8613727   PMID:9187081   PMID:9415433   PMID:10516593   PMID:11163262   PMID:12397111   PMID:12477932   PMID:12724837   PMID:14671321   PMID:14769946   PMID:15028753   PMID:16007083  
PMID:17678855   PMID:21875655   PMID:22920256   PMID:23042297   PMID:24489801  


Genomics

Comparative Map Data
Dlx1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8376,763,864 - 76,768,454 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl376,763,500 - 76,768,447 (+)EnsemblGRCr8
mRatBN7.2356,356,190 - 56,360,780 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl356,356,190 - 56,360,780 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx359,754,121 - 59,758,700 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0368,337,729 - 68,342,308 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0366,099,889 - 66,104,437 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0358,164,931 - 58,169,521 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl358,164,931 - 58,169,521 (+)Ensemblrn6Rnor6.0
Rnor_5.0364,650,292 - 64,654,882 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4353,837,052 - 53,841,642 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera355,903,832 - 55,908,422 (+)NCBICelera
RGSC_v3.1353,733,423 - 53,738,014 (+)NCBI
Cytogenetic Map3q23NCBI
DLX1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382172,085,507 - 172,089,674 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2172,084,740 - 172,089,677 (+)Ensemblhg38GRCh38
GRCh372172,950,235 - 172,954,402 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362172,658,454 - 172,662,648 (+)NCBIBuild 36Build 36hg18NCBI36
Celera2166,566,309 - 166,570,503 (+)NCBICelera
Cytogenetic Map2q31.1NCBI
HuRef2164,830,459 - 164,834,653 (+)NCBIHuRef
CHM1_12172,957,684 - 172,961,878 (+)NCBICHM1_1
T2T-CHM13v2.02172,570,383 - 172,575,917 (+)NCBIT2T-CHM13v2.0
Dlx1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39271,358,457 - 71,364,325 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl271,358,457 - 71,364,325 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38271,528,113 - 71,533,981 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl271,528,113 - 71,533,981 (+)Ensemblmm10GRCm38
MGSCv37271,367,502 - 71,372,037 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36271,330,284 - 71,334,819 (+)NCBIMGSCv36mm8
Celera273,193,503 - 73,198,048 (+)NCBICelera
Cytogenetic Map2C2NCBI
cM Map242.61NCBI
Dlx1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554492,920,478 - 2,924,667 (-)Ensembl
ChiLan1.0NW_0049554492,920,705 - 2,924,667 (-)NCBIChiLan1.0ChiLan1.0
DLX1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21374,768,913 - 74,773,852 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B74,784,291 - 74,788,828 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B59,382,156 - 59,387,100 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B176,839,361 - 176,843,909 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B176,839,721 - 176,843,909 (+)EnsemblpanPan2panpan1.1
DLX1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13616,485,158 - 16,489,397 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3616,484,859 - 16,487,886 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3616,493,520 - 16,498,111 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03616,605,670 - 16,610,243 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3616,605,155 - 16,610,240 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13616,693,224 - 16,697,802 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03616,693,589 - 16,698,176 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03616,797,500 - 16,802,082 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dlx1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303133,693,510 - 133,698,405 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365092,248,181 - 2,250,991 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365092,248,181 - 2,250,991 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DLX1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1578,185,790 - 78,191,226 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11578,186,667 - 78,191,788 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21587,613,190 - 87,617,605 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DLX1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11057,586,452 - 57,599,071 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1057,590,838 - 57,595,266 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666040141,953,127 - 141,958,074 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dlx1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247879,514,573 - 9,519,724 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247879,514,170 - 9,519,309 (+)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Dlx1
33 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:181
Count of miRNA genes:122
Interacting mature miRNAs:156
Transcripts:ENSRNOT00000002078
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300178Hrtrt4Heart rate QTL 43.74heart pumping trait (VT:2000009)heart rate (CMO:0000002)351490129111359995Rat
1358293Bw38Body weight QTL 3860.0000031body mass (VT:0001259)body weight (CMO:0000012)374364268119364268Rat
61377Edpm3Estrogen-dependent pituitary mass QTL 37.050.038pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)373592611110333156Rat
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1331795Rf30Renal function QTL 303.708urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)35986366387321459Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)373592512136118980Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
1354589Bw31Body weight QTL 313.3body mass (VT:0001259)body weight (CMO:0000012)35365182698651826Rat
2303593Gluco46Glucose level QTL 463blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)34887661993876619Rat
1354590Despr11Despair related QTL 110.000031locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)34887661993876619Rat
2298542Neuinf11Neuroinflammation QTL 113.9nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)33540319997383526Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)358601291153936591Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)349872657138829559Rat
631832Sach1Saccharin preference QTL 12.70.02consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)34790417292904172Rat
1582218Bw74Body weight QTL 743.90.0021body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1331777Bw24Body weight QTL 243.503body mass (VT:0001259)body weight (CMO:0000012)35986366387321459Rat
631647Bp122Blood pressure QTL 1226.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)35109256196092561Rat
1300169Bp177Blood pressure QTL 1772.96arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)33642511681425116Rat
9590286Uminl1Urine mineral level QTL 13.50.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)34865774493657744Rat
724523Tsu1Thymus enlargement suppressive QTL 13.84thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)370845569136091483Rat
4889966Bss95Bone structure and strength QTL 954.4tibia area (VT:1000281)tibia-fibula cross-sectional area (CMO:0001718)33779691982796919Rat
2302276Bw82Body weight QTL 824.32body mass (VT:0001259)body weight (CMO:0000012)35986366383358329Rat
2292613Ept16Estrogen-induced pituitary tumorigenesis QTL 168.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat
738019Anxrr10Anxiety related response QTL 103.9exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)358925062103925062Rat
631841Niddm39Non-insulin dependent diabetes mellitus QTL 393.36blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)370311536115311536Rat
9590136Scort3Serum corticosterone level QTL 323.370.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)34865774493657744Rat
61419Cia11Collagen induced arthritis QTL 115.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)35076614595766145Rat
61356Bp37Blood pressure QTL 373blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)35109256196092561Rat
1558650Cm48Cardiac mass QTL 4840.0001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)35076614595766145Rat
1358905Hrtrt17Heart rate QTL 175.90.000014heart pumping trait (VT:2000009)heart rate (CMO:0000002)336721849110333156Rat
8694196Abfw2Abdominal fat weight QTL 216.580.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)34865774493657744Rat
1582249Bw77Body weight QTL 773.20.0025epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)37359251285062403Rat
1354597Kidm13Kidney mass QTL 132.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)342158111124558371Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31141509147Rat
2325840Bp345Blood pressure QTL 3450.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)33870893183708931Rat
8552950Pigfal12Plasma insulin-like growth factor 1 level QTL 127.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)34865774493657744Rat
631676Cm8Cardiac mass QTL 87.030.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)33736373482363734Rat
2290452Scl56Serum cholesterol level QTL 562.26blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)33610140381101403Rat
8694386Bw159Body weight QTL 1594.520.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)34865774493657744Rat
1354604Bw36Body weight QTL 362.9body mass (VT:0001259)body weight (CMO:0000012)342158111124558371Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)35675975141509147Rat
1358186Ept2Estrogen-induced pituitary tumorigenesis QTL 28.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat

Markers in Region
BE112823  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2356,359,276 - 56,359,426 (+)MAPPERmRatBN7.2
Rnor_6.0358,168,018 - 58,168,167NCBIRnor6.0
Rnor_5.0364,653,379 - 64,653,528UniSTSRnor5.0
RGSC_v3.4353,840,139 - 53,840,288UniSTSRGSC3.4
Celera355,906,919 - 55,907,068UniSTS
RH 3.4 Map4403.05UniSTS
Cytogenetic Map3q21UniSTS
AU048745  
Rat AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map5q32UniSTS
Cytogenetic Map13q24UniSTS
Cytogenetic Map6q32UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map16p14UniSTS
Cytogenetic Map13q26UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map7q11UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map5q21UniSTS
Cytogenetic Map4q24UniSTS
Cytogenetic Map2q11UniSTS
Cytogenetic Map1q54UniSTS
Cytogenetic Map1q36UniSTS
Cytogenetic Map18p11UniSTS
Cytogenetic Map13q13UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map8q31UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map13p13UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map10q31UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map5q36UniSTS
Cytogenetic Map3p13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
9 3 52 144 56 50 25 38 25 5 206 116 9 126 54 78 25 8 8

Sequence


Ensembl Acc Id: ENSRNOT00000002078   ⟹   ENSRNOP00000002078
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl376,763,500 - 76,768,447 (+)Ensembl
mRatBN7.2 Ensembl356,356,190 - 56,360,780 (+)Ensembl
Rnor_6.0 Ensembl358,164,931 - 58,169,521 (+)Ensembl
RefSeq Acc Id: NM_001100531   ⟹   NP_001094001
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8376,763,864 - 76,768,454 (+)NCBI
mRatBN7.2356,356,190 - 56,360,780 (+)NCBI
Rnor_6.0358,164,931 - 58,169,521 (+)NCBI
Rnor_5.0364,650,292 - 64,654,882 (+)NCBI
RGSC_v3.4353,837,052 - 53,841,642 (+)RGD
Celera355,903,832 - 55,908,422 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001094001 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI67073 (Get FASTA)   NCBI Sequence Viewer  
  AAP32272 (Get FASTA)   NCBI Sequence Viewer  
  EDL79104 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000002078
GenBank Protein Q64202 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001094001   ⟸   NM_001100531
- UniProtKB: G3V669 (UniProtKB/TrEMBL),   A6HM52 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000002078   ⟸   ENSRNOT00000002078
Protein Domains
Homeobox

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q64202-F1-model_v2 AlphaFold Q64202 1-44 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309593 AgrOrtholog
BioCyc Gene G2FUF-49461 BioCyc
Ensembl Genes ENSRNOG00000001520 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000002078 ENTREZGENE
IMAGE_CLONE IMAGE:8364673 IMAGE-MGC_LOAD
MGC_CLONE MGC:189409 IMAGE-MGC_LOAD
NCBI Gene 296500 ENTREZGENE
PhenoGen Dlx1 PhenoGen
RatGTEx ENSRNOG00000001520 RatGTEx
UniProt A6HM52 ENTREZGENE, UniProtKB/TrEMBL
  B2RZ95_RAT UniProtKB/TrEMBL
  DLX1_RAT UniProtKB/Swiss-Prot
  G3V669 ENTREZGENE, UniProtKB/TrEMBL
  Q64202 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Dlx1  distal-less homeobox 1  Dlx1_predicted  distal-less homeobox 1 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Dlx1_predicted  distal-less homeobox 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED