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Gene: Scnm1 (sodium channel modifier 1) Rattus norvegicus
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Symbol: Scnm1
Name: sodium channel modifier 1
Description: Predicted to have enzyme binding activity. Predicted to be involved in alternative mRNA splicing, via spliceosome. Predicted to localize to nuclear speck.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC310662
Orthologs:
Homo sapiens (human) : SCNM1 (sodium channel modifier 1)  Alliance
Mus musculus (house mouse) : Scnm1 (sodium channel modifier 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scnm1 (sodium channel modifier 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SCNM1 (sodium channel modifier 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scnm1 (sodium channel modifier 1)
Sus scrofa (pig) : SCNM1 (sodium channel modifier 1)
Chlorocebus sabaeus (African green monkey) : SCNM1 (sodium channel modifier 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02196,300,239 - 196,304,419 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2196,300,239 - 196,304,169 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02215,794,553 - 215,798,889 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42190,035,097 - 190,039,027 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12189,996,175 - 189,999,993 (-)NCBI
Celera2175,237,678 - 175,241,608 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Scnm1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308968
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.