Reck (reversion-inducing-cysteine-rich protein with kazal motifs) - Rat Genome Database

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Gene: Reck (reversion-inducing-cysteine-rich protein with kazal motifs) Rattus norvegicus
Analyze
Symbol: Reck
Name: reversion-inducing-cysteine-rich protein with kazal motifs
RGD ID: 1308845
Description: Predicted to enable Wnt-protein binding activity; coreceptor activity; and metalloendopeptidase inhibitor activity. Predicted to be involved in several processes, including blood vessel development; negative regulation of metalloendopeptidase activity; and positive regulation of canonical Wnt signaling pathway. Predicted to act upstream of or within embryo implantation and embryonic forelimb morphogenesis. Predicted to be part of Wnt signalosome. Predicted to be active in plasma membrane. Orthologous to human RECK (reversion inducing cysteine rich protein with kazal motifs); INTERACTS WITH (+)-pilocarpine; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC313488; reversion-inducing cysteine-rich protein with Kazal motifs
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8562,898,717 - 62,965,274 (+)NCBIGRCr8
mRatBN7.2558,102,961 - 58,169,516 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl558,102,981 - 58,169,502 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx560,083,588 - 60,149,992 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0561,902,399 - 61,968,803 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0561,873,115 - 61,939,270 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0559,348,568 - 59,415,169 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl559,348,639 - 59,415,135 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0563,871,829 - 63,938,407 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4560,341,438 - 60,407,710 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1560,387,714 - 60,408,110 (+)NCBI
Celera556,682,966 - 56,749,232 (+)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (EXP)
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (ISO)
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP,ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-methoxyethanol  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
acrylamide  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
atrazine  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
calcium dichloride  (ISO)
carbon nanotube  (ISO)
chlorpyrifos  (ISO)
cisplatin  (ISO)
cocaine  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (ISO)
cumene  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (ISO)
dioxygen  (ISO)
diuron  (EXP)
dorsomorphin  (ISO)
elemental selenium  (ISO)
ellagic acid  (ISO)
emetine  (ISO)
entinostat  (ISO)
eugenol  (EXP)
fenvalerate  (EXP)
fluoranthene  (ISO)
folic acid  (ISO)
fulvestrant  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
indometacin  (ISO)
irinotecan  (ISO)
lithium chloride  (EXP)
methimazole  (EXP)
N-methyl-N'-nitro-N-nitrosoguanidine  (EXP)
N-nitrosodiethylamine  (ISO)
nickel atom  (ISO)
nickel dichloride  (ISO)
nickel sulfate  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (EXP)
perfluorohexanesulfonic acid  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
potassium chromate  (ISO)
progesterone  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (EXP,ISO)
solasodine  (ISO)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
tetrachloromethane  (ISO)
theophylline  (ISO)
titanium dioxide  (ISO)
tomatidine  (ISO)
topotecan  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
urethane  (ISO)
Ursonic acid  (ISO)
valproic acid  (ISO)
zinc dichloride  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9789069   PMID:11747814   PMID:17987394   PMID:18194466   PMID:18300271   PMID:18556655   PMID:18591254   PMID:19838811   PMID:20225208   PMID:23213437   PMID:24812324   PMID:28803732  
PMID:30026314   PMID:30424792   PMID:31493243   PMID:32403397   PMID:38686051  


Genomics

Comparative Map Data
Reck
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8562,898,717 - 62,965,274 (+)NCBIGRCr8
mRatBN7.2558,102,961 - 58,169,516 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl558,102,981 - 58,169,502 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx560,083,588 - 60,149,992 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0561,902,399 - 61,968,803 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0561,873,115 - 61,939,270 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0559,348,568 - 59,415,169 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl559,348,639 - 59,415,135 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0563,871,829 - 63,938,407 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4560,341,438 - 60,407,710 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1560,387,714 - 60,408,110 (+)NCBI
Celera556,682,966 - 56,749,232 (+)NCBICelera
Cytogenetic Map5q22NCBI
RECK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38936,036,913 - 36,124,455 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl936,036,913 - 36,124,455 (+)EnsemblGRCh38hg38GRCh38
GRCh37936,036,910 - 36,124,452 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36936,026,906 - 36,114,448 (+)NCBINCBI36Build 36hg18NCBI36
Build 34936,026,915 - 36,114,448NCBI
Celera935,970,460 - 36,058,013 (+)NCBICelera
Cytogenetic Map9p13.3NCBI
HuRef935,990,948 - 36,078,557 (+)NCBIHuRef
CHM1_1936,037,355 - 36,124,852 (+)NCBICHM1_1
T2T-CHM13v2.0936,058,906 - 36,146,459 (+)NCBIT2T-CHM13v2.0
Reck
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39443,875,521 - 43,944,806 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl443,875,530 - 43,944,806 (+)EnsemblGRCm39 Ensembl
GRCm38443,875,521 - 43,944,806 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl443,875,530 - 43,944,806 (+)EnsemblGRCm38mm10GRCm38
MGSCv37443,888,402 - 43,957,678 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36443,896,700 - 43,965,620 (+)NCBIMGSCv36mm8
MGSCv36442,710,564 - 42,778,727 (+)NCBIMGSCv36mm8
Celera443,902,817 - 43,958,027 (+)NCBICelera
Celera441,986,209 - 41,997,348 (+)NCBICelera
Cytogenetic Map4B1NCBI
cM Map423.05NCBI
Reck
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955472223,683 - 287,089 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955472222,261 - 276,869 (-)NCBIChiLan1.0ChiLan1.0
RECK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21188,465,165 - 88,552,758 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1988,471,105 - 88,559,789 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0935,886,741 - 35,974,133 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1936,703,607 - 36,775,516 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl936,699,631 - 36,774,116 (+)Ensemblpanpan1.1panPan2
RECK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11152,519,303 - 52,607,753 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1152,519,317 - 52,607,217 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1151,109,989 - 51,185,477 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01153,625,516 - 53,714,665 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1153,625,498 - 53,790,061 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11152,128,385 - 52,204,061 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01152,150,596 - 52,226,091 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01152,852,123 - 52,927,620 (+)NCBIUU_Cfam_GSD_1.0
Reck
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947167,474,080 - 167,552,123 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365244,021,660 - 4,099,705 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365244,021,666 - 4,099,703 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RECK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1236,821,414 - 236,898,276 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11236,821,243 - 236,898,280 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21264,672,781 - 264,733,611 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RECK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11244,431,807 - 44,517,893 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1244,431,615 - 44,517,810 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603841,521,945 - 41,609,100 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Reck
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248684,603,955 - 4,713,652 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248684,604,157 - 4,713,838 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Reck
263 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:97
Count of miRNA genes:85
Interacting mature miRNAs:92
Transcripts:ENSRNOT00000060264
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298067Scl15Serum cholesterol level QTL 154.80.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53321566578215665Rat
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)54786906290099692Rat
1578776Stresp18Stress response QTL 182.9thymus mass (VT:0004954)thymus wet weight (CMO:0000855)52795544072955440Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)51887394774251464Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
1598807Glom12Glomerulus QTL 122.7kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)53321566578215665Rat
1302786Kidm8Kidney mass QTL 828.15kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)53321566578215665Rat
6903292Stl28Serum triglyceride level QTL 282.60.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)52851548973515489Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
1578767Stresp17Stress response QTL 174.30.01blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)52795544072955440Rat
7411561Bw134Body weight QTL 134240.001body mass (VT:0001259)body weight gain (CMO:0000420)54946360094463600Rat
1641922Alcrsp8Alcohol response QTL 8alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)53518915368564008Rat
2303615Vencon7Ventilatory control QTL 70.001respiration trait (VT:0001943)respiration rate (CMO:0000289)55098389595983895Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)550328551141643988Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535189153141643988Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
6903306Scl35Serum cholesterol QTL 352.60.0073blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)52851548973515489Rat
1576317Eutr2Estrogen induced uterine response QTL 20.01uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)534730116104251008Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
1331773Scl26Serum cholesterol level QTL 263.065blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)54372665686724018Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555805606132207589Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)572947086724018Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)555715622100715622Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531663789131345958Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5228222669540447Rat
9589025Epfw7Epididymal fat weight QTL 720.660.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)54946360094463600Rat
2303574Gluco42Glucose level QTL 422blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)55349671998496719Rat
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
8552954Pigfal14Plasma insulin-like growth factor 1 level QTL 149blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)52122674466226744Rat
2316959Gluco59Glucose level QTL 594.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)534944474113558310Rat
1600358Mamtr5Mammary tumor resistance QTL 5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)51887394763873947Rat

Markers in Region
D5Got225  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2558,133,387 - 58,133,573 (+)MAPPERmRatBN7.2
Rnor_6.0559,379,041 - 59,379,226NCBIRnor6.0
Rnor_5.0563,902,279 - 63,902,464UniSTSRnor5.0
RGSC_v3.4560,371,806 - 60,371,991UniSTSRGSC3.4
Celera556,713,279 - 56,713,472UniSTS
Cytogenetic Map5q22UniSTS
RH130414  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2558,169,197 - 58,169,377 (+)MAPPERmRatBN7.2
Rnor_6.0559,414,851 - 59,415,030NCBIRnor6.0
Rnor_5.0563,938,089 - 63,938,268UniSTSRnor5.0
RGSC_v3.4560,407,616 - 60,407,795UniSTSRGSC3.4
Celera556,749,138 - 56,749,317UniSTS
Cytogenetic Map5q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000060264   ⟹   ENSRNOP00000057015
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl558,102,987 - 58,169,292 (+)Ensembl
Rnor_6.0 Ensembl559,348,640 - 59,414,945 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000084031   ⟹   ENSRNOP00000070900
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl558,102,981 - 58,169,502 (+)Ensembl
Rnor_6.0 Ensembl559,348,639 - 59,415,135 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000106073   ⟹   ENSRNOP00000079723
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl558,122,831 - 58,169,502 (+)Ensembl
RefSeq Acc Id: NM_001415923   ⟹   NP_001402852
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8562,898,717 - 62,965,274 (+)NCBI
mRatBN7.2558,102,961 - 58,169,516 (+)NCBI
RefSeq Acc Id: XM_006238069   ⟹   XP_006238131
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8562,923,189 - 62,965,271 (+)NCBI
mRatBN7.2558,124,285 - 58,169,513 (+)NCBI
Rnor_6.0559,372,058 - 59,415,169 (+)NCBI
Rnor_5.0563,871,829 - 63,938,407 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063287725   ⟹   XP_063143795
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8562,918,247 - 62,965,271 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001402852 (Get FASTA)   NCBI Sequence Viewer  
  XP_006238131 (Get FASTA)   NCBI Sequence Viewer  
  XP_063143795 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL98778 (Get FASTA)   NCBI Sequence Viewer  
  EDL98779 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000057015.2
  ENSRNOP00000070900.1
  ENSRNOP00000079723.1
RefSeq Acc Id: XP_006238131   ⟸   XM_006238069
- Peptide Label: isoform X2
- UniProtKB: A0A8I5ZRL0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000057015   ⟸   ENSRNOT00000060264
Ensembl Acc Id: ENSRNOP00000070900   ⟸   ENSRNOT00000084031
Ensembl Acc Id: ENSRNOP00000079723   ⟸   ENSRNOT00000106073
RefSeq Acc Id: NP_001402852   ⟸   NM_001415923
- Peptide Label: precursor
- UniProtKB: A0A0G2JZ40 (UniProtKB/TrEMBL),   A6IJ58 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063143795   ⟸   XM_063287725
- Peptide Label: isoform X1
Protein Domains
Kazal-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JZ40-F1-model_v2 AlphaFold A0A0G2JZ40 1-972 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693687
Promoter ID:EPDNEW_R4209
Type:initiation region
Name:Reck_1
Description:reversion-inducing-cysteine-rich protein with kazal motifs
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0559,348,614 - 59,348,674EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308845 AgrOrtholog
BioCyc Gene G2FUF-41482 BioCyc
Ensembl Genes ENSRNOG00000014863 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000060264.3 UniProtKB/TrEMBL
  ENSRNOT00000084031.2 UniProtKB/TrEMBL
  ENSRNOT00000106073.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.60.30 UniProtKB/TrEMBL
InterPro Kazal_dom_sf UniProtKB/TrEMBL
  Prot_inh_Kazal UniProtKB/TrEMBL
  RECK UniProtKB/TrEMBL
  RECK-like_dom UniProtKB/TrEMBL
  RECK-like_N UniProtKB/TrEMBL
NCBI Gene 313488 ENTREZGENE
PANTHER PTHR13487 UniProtKB/TrEMBL
  REVERSION-INDUCING CYSTEINE-RICH PROTEIN WITH KAZAL MOTIFS UniProtKB/TrEMBL
Pfam Kazal_2 UniProtKB/TrEMBL
  RECK-like_dom UniProtKB/TrEMBL
  RECK-like_N UniProtKB/TrEMBL
PhenoGen Reck PhenoGen
PROSITE KAZAL UniProtKB/TrEMBL
  KAZAL_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000014863 RatGTEx
SMART KAZAL UniProtKB/TrEMBL
Superfamily-SCOP SSF100895 UniProtKB/TrEMBL
UniProt A0A0G2JZ40 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZRL0 ENTREZGENE, UniProtKB/TrEMBL
  A6IJ58 ENTREZGENE, UniProtKB/TrEMBL
  A6IJ59_RAT UniProtKB/TrEMBL
  D4ABJ4_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Reck  reversion-inducing-cysteine-rich protein with kazal motifs   Reck_predicted  reversion-inducing-cysteine-rich protein with kazal motifs (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Reck_predicted  reversion-inducing-cysteine-rich protein with kazal motifs (predicted)      Symbol and Name status set to approved 70820 APPROVED