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Gene: Fkbp8 (FKBP prolyl isomerase 8) Rattus norvegicus

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Symbol:

Fkbp8

Name:

FKBP prolyl isomerase 8

RGD ID:

1308670

Description:

Predicted to enable several functions, including calmodulin binding activity; disordered domain specific binding activity; and identical protein binding activity. Predicted to be involved in several processes, including negative regulation of protein phosphorylation; protein folding; and regulation of mitophagy. Predicted to act upstream of or within several processes, including nervous system development; positive regulation of BMP signaling pathway; and smoothened signaling pathway. Predicted to be located in endoplasmic reticulum membrane and mitochondrion. Predicted to be part of protein-containing complex. Predicted to be active in several cellular components, including cytosol; endomembrane system; and mitochondrial envelope. Orthologous to human FKBP8 (FKBP prolyl isomerase 8); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4,6-trinitrotoluene; 4-amino-2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

FK506 binding protein 8; FK506 binding protein 8, 38kDa; FK506-binding protein 8; FKBP-8; LOC290652; MGC125185; peptidyl-prolyl cis-trans isomerase; peptidyl-prolyl cis-trans isomerase FKBP8; PPIase; PPIase FKBP8; rotamase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FKBP8 (FKBP prolyl isomerase 8)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther, PhylomeDB
Mus musculus (house mouse):	Fkbp8 (FK506 binding protein 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Fkbp8 (FKBP prolyl isomerase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FKBP8 (FKBP prolyl isomerase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FKBP8 (FKBP prolyl isomerase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fkbp8 (FKBP prolyl isomerase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FKBP8 (FKBP prolyl isomerase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FKBP8 (FKBP prolyl isomerase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fkbp8 (FKBP prolyl isomerase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	FKBP8 (FKBP prolyl isomerase 8)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Fkbp8 (FK506 binding protein 8)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	fkbp8 (FKBP prolyl isomerase 8)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	zda	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	fkbp8	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	18,929,581 - 18,936,621 (-)	NCBI		GRCr8
GRCr8 Ensembl	16	18,929,582 - 18,936,543 (-)	Ensembl		GRCr8 Ensembl
mRatBN7.2	16	18,895,608 - 18,902,648 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	18,893,576 - 18,902,612 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	18,937,354 - 18,944,324 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	20,070,071 - 20,077,034 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	18,990,316 - 18,997,286 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	20,645,956 - 20,652,890 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	20,645,957 - 20,652,889 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	20,501,665 - 20,508,369 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	19,401,883 - 19,407,192 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	16	19,087,049 - 19,094,012 (-)	NCBI		Celera
RGSC_v3.1	16	19,401,881 - 19,408,527 (-)	NCBI
Cytogenetic Map	16	p14	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

clubfoot (ISS)

Marfanoid Mental Retardation Syndrome, Autosomal (ISO)

Megalencephaly-Polymicrogyria-Polydactyly-Hydrocephalus Syndrome 1 (ISO)

spina bifida (ISS)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

1-chloro-2,4-dinitrobenzene (ISO)

17beta-hydroxy-17-methylestra-4,9,11-trien-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,6-trinitrotoluene (EXP)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-amino-2,6-dinitrotoluene (EXP)

all-trans-4-oxoretinoic acid (ISO)

all-trans-retinoic acid (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (ISO)

beta-lapachone (ISO)

beta-naphthoflavone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

cadmium dichloride (EXP)

cannabidiol (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

chromium(6+) (ISO)

ciguatoxin CTX1B (ISO)

clofibrate (ISO)

clozapine (ISO)

Cuprizon (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

ethanol (ISO)

fenofibrate (ISO)

fenthion (ISO)

flutamide (EXP)

folic acid (ISO)

FR900359 (ISO)

gentamycin (EXP)

hydrogen cyanide (ISO)

isotretinoin (ISO)

ivermectin (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methotrexate (ISO)

N-methyl-4-phenylpyridinium (ISO)

nitrates (ISO)

ochratoxin A (ISO)

paracetamol (ISO)

pentachlorophenol (ISO)

pioglitazone (ISO)

potassium cyanide (ISO)

quercetin (ISO)

resveratrol (ISO)

rotenone (ISO)

SB 431542 (ISO)

sodium arsenite (EXP,ISO)

tert-butyl hydroperoxide (ISO)

testosterone enanthate (ISO)

tetrahydropalmatine (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

trovafloxacin (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (IEA,ISO)

BMP signaling pathway (IEA,ISO)

camera-type eye development (IEA,ISO)

cell fate specification (IEA,ISO)

dorsal/ventral neural tube patterning (IEA,ISO)

dorsal/ventral pattern formation (IEA,ISO)

multicellular organism growth (IEA,ISO)

negative regulation of apoptotic process (IBA,IEA,ISO)

negative regulation of protein phosphorylation (ISO)

neural tube development (IEA,ISO)

neuron fate specification (IEA,ISO)

positive regulation of BMP signaling pathway (IEA,ISO)

protein folding (IBA,IEA,ISO)

protein localization to mitochondrion (IEA,ISO)

regulation of BMP signaling pathway (IEA,ISO)

regulation of gene expression (IEA,ISO)

regulation of macromolecule metabolic process (IEA)

regulation of mitophagy (IEA,ISO)

signal transduction (IEA)

smoothened signaling pathway (IEA,ISO)

Cellular Component

cytosol (IBA,IEA,ISO)

endomembrane system (IBA)

endoplasmic reticulum (IEA,ISO)

endoplasmic reticulum membrane (IEA,ISO)

membrane (IBA,IEA)

mitochondrial envelope (IBA,IEA,ISO)

mitochondrial membrane (IEA)

mitochondrion (IEA,ISO)

protein-containing complex (IEA,ISO)

Molecular Function

calmodulin binding (IEA,ISO)

disordered domain specific binding (IEA,ISO)

identical protein binding (IEA,ISO)

isomerase activity (IEA)

peptidyl-prolyl cis-trans isomerase activity (IEA)

protein binding (ISO)

protein folding chaperone (IBA,IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15105374	PMID:15733859	PMID:17024179	PMID:18003640	PMID:18590716	PMID:18614015	PMID:19946888	PMID:26748656	PMID:29916806	PMID:31505169

Genomics

Comparative Map Data

Fkbp8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	18,929,581 - 18,936,621 (-)	NCBI		GRCr8
GRCr8 Ensembl	16	18,929,582 - 18,936,543 (-)	Ensembl		GRCr8 Ensembl
mRatBN7.2	16	18,895,608 - 18,902,648 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	18,893,576 - 18,902,612 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	18,937,354 - 18,944,324 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	20,070,071 - 20,077,034 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	18,990,316 - 18,997,286 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	20,645,956 - 20,652,890 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	20,645,957 - 20,652,889 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	20,501,665 - 20,508,369 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	19,401,883 - 19,407,192 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	16	19,087,049 - 19,094,012 (-)	NCBI		Celera
RGSC_v3.1	16	19,401,881 - 19,408,527 (-)	NCBI
Cytogenetic Map	16	p14	NCBI

FKBP8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	18,531,763 - 18,543,573 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	18,531,751 - 18,544,077 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	18,642,573 - 18,654,383 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	18,503,568 - 18,515,383 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	18,503,567 - 18,515,383	NCBI
Celera	19	18,544,773 - 18,556,588 (-)	NCBI		Celera
Cytogenetic Map	19	p13.11	NCBI
HuRef	19	18,205,047 - 18,217,230 (-)	NCBI		HuRef
CHM1_1	19	18,643,053 - 18,654,863 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	18,667,119 - 18,678,929 (-)	NCBI		T2T-CHM13v2.0

Fkbp8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	70,980,371 - 70,987,978 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	70,980,374 - 70,987,978 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	70,527,721 - 70,535,328 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	70,527,724 - 70,535,328 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	73,051,642 - 73,059,227 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	73,458,516 - 73,464,312 (+)	NCBI		MGSCv36	mm8
Celera	8	73,084,164 - 73,091,753 (+)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI
cM Map	8	34.15	NCBI

Fkbp8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955524	3,036,953 - 3,044,296 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955524	3,037,825 - 3,044,296 (+)	NCBI	ChiLan1.0	ChiLan1.0

FKBP8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	23,391,263 - 23,403,519 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	22,399,718 - 22,411,982 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	18,009,505 - 18,021,772 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	18,980,269 - 18,992,170 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	18,980,269 - 18,992,170 (-)	Ensembl	panpan1.1		panPan2

FKBP8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	44,494,856 - 44,504,084 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	44,489,219 - 44,598,497 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	44,409,560 - 44,418,774 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	44,981,067 - 44,990,281 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	44,980,688 - 44,990,281 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	44,218,433 - 44,227,646 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	44,628,579 - 44,637,790 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	44,904,032 - 44,913,247 (+)	NCBI		UU_Cfam_GSD_1.0

Fkbp8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	203,177,956 - 203,186,579 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936596	2,728,114 - 2,735,317 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936596	2,728,089 - 2,735,718 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FKBP8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	59,253,342 - 59,267,165 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	59,256,546 - 59,267,171 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	59,035,636 - 59,046,247 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FKBP8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	17,007,764 - 17,018,409 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	17,007,390 - 17,017,714 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666074	2,321,762 - 2,332,880 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fkbp8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624908	1,713,590 - 1,720,709 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Fkbp8
24 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	76
Count of miRNA genes:	62
Interacting mature miRNAs:	68
Transcripts:	ENSRNOT00000027040
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1549842	Bp248	Blood pressure QTL 248		0.01	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	16	387123	45387123	Rat
2307172	Activ4	Activity QTL 4	3.71	0.00023	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	1	33425095	Rat
1354584	Despr6	Despair related QTL 6	3.1	0.0067	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	1	39568015	Rat
737819	Hcas4	Hepatocarcinoma susceptibility QTL 4	4.43		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	16	4234212	53708481	Rat
631517	Scl9	Serum cholesterol level QTL 9	3.3		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	16	15748006	25801629	Rat
1354625	Despr7	Despair related QTL 7	3.16	0.016	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	4744222	49744222	Rat
61405	Niddm6	Non-insulin dependent diabetes mellitus QTL 6	3.66	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	16	1	26734272	Rat
631830	Alc7	Alcohol consumption QTL 7	2.9		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	1	26734272	Rat
7411664	Foco30	Food consumption QTL 30	11	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	4354822	49354822	Rat
1600378	Arunc4	Aerobic running capacity QTL 4		0.03	exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	16	387123	45387123	Rat
70183	BpQTLcluster13	Blood pressure QTL cluster 13	3.654		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	16	4234212	49757901	Rat
737826	Alc11	Alcohol consumption QTL 11	3.2		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	4234212	66955197	Rat
1600369	Hcas8	Hepatocarcinoma susceptibility QTL 8			liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	16	16278184	27244292	Rat
2303566	Bw90	Body weight QTL 90	2		body mass (VT:0001259)	body weight (CMO:0000012)	16	1	39568015	Rat
2312663	Slep9	Serum leptin concentration QTL 9		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	839086	66195506	Rat
2306902	Bp339	Blood pressure QTL 339		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	16	3386790	49757901	Rat
1300133	Rf24	Renal function QTL 24	3.64		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	16	3386790	26128267	Rat
2312660	Bw95	Body weight QTL 95		0.05	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	16	839086	66195506	Rat
2312666	Insul16	Insulin level QTL 16		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	16	839086	66195506	Rat
634355	Rends4	Renal damage susceptibility QTL 4		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	16	1	26734272	Rat
70205	Gcr3	Gastric cancer resistance QTL 3	2.3		stomach morphology trait (VT:0000470)	stomach tumor diameter (CMO:0001889)	16	17730818	72536785	Rat
2293343	Glom16	Glomerulus QTL 16	7.4		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	16	839086	52786090	Rat
2301406	Kidm39	Kidney mass QTL 39		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	16	15905802	60905802	Rat
2312669	Stl23	Serum triglyceride level QTL 23		0.01	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	16	839086	66195506	Rat
6903319	Bw114	Body weight QTL 114	2.7	0.0037	body mass (VT:0001259)	body weight (CMO:0000012)	16	3301683	48301683	Rat

Markers in Region

RH128354

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	18,895,671 - 18,895,853 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	20,646,020 - 20,646,201	NCBI	Rnor6.0
Rnor_5.0	16	20,501,729 - 20,501,910	UniSTS	Rnor5.0
RGSC_v3.4	16	19,401,947 - 19,402,128	UniSTS	RGSC3.4
Celera	16	19,087,113 - 19,087,294	UniSTS
RH 3.4 Map	16	214.6	UniSTS
Cytogenetic Map	16	p14	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
9	11	49	113	91	90	59	25	59	6	218	97	11	93	45	60	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001037180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275163	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275164	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275170	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275171	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275172	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275182	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275184	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275185	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC107454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ216680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ219623	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000077756 ⟹ ENSRNOP00000074539

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	18,929,582 - 18,936,543 (-)	Ensembl
mRatBN7.2 Ensembl	16	18,893,576 - 18,902,612 (-)	Ensembl
Rnor_6.0 Ensembl	16	20,645,957 - 20,652,889 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095622 ⟹ ENSRNOP00000087668

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	18,929,582 - 18,936,543 (-)	Ensembl
mRatBN7.2 Ensembl	16	18,895,633 - 18,900,999 (-)	Ensembl

RefSeq Acc Id:

NM_001037180 ⟹ NP_001032257

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,543 (-)	NCBI
mRatBN7.2	16	18,895,608 - 18,902,570 (-)	NCBI
Rnor_6.0	16	20,645,956 - 20,652,890 (-)	NCBI
Rnor_5.0	16	20,501,665 - 20,508,369 (-)	NCBI
RGSC_v3.4	16	19,401,883 - 19,407,192 (-)	RGD
Celera	16	19,087,049 - 19,094,012 (-)	RGD

Sequence:

show sequence

CTGGGGGTGGGGAGGGGGGCACAGGACCCCAAGCGGGGTCCCCAAGCCGCAGGGCCAGTTCCTG
ATCCCCCAGCAGCATGGCGTCTTGGGCCGAGCCCTCTGAGCCTGCTGCCCAGCTACTTTGTGGG
GCCCCACTCCTGGAGGGCTTTGAGGTGCTTGATGGGGTTGATGATGCAGAGGAGGAAGATGACC
TAAGTGGGTTGCCACCACTAGAGGATATGGGACAGCCTACGGTGGAGGAGGCTGAGCAGCCTGG
AGCCCTAGCTCGGGAGTTCCTGGCAGCCACAGAGCCTGAGCCAGCCCCAGCCCCCGCCCCGGAA
GAGTGGCTGGACATTCTGGGGAACGGATTGCTGCGTAAGAAGACACTGGTCCCAGGCCCAACAG
GCTCTAGCCGCCCACTCAAGGGCCAGGTGGTGACCGTACACCTGCAGATGTCCCTGGAGAATGG
CACCCGTGTGCAAGAGGAGCCCGAACTGGCTTTCACGCTTGGAGACTGCGATGTTATCCAGGCC
CTGGACCTCAGCGTCCCGCTCATGCATGTGGGCGAGACAGCAATGGTCACCGCTGACTCCAAGT
ACTGCTACGGTCCCCAGGGCAGCAGGAGCCCATACATCCCCCCCCATGCAGCCCTGTGCCTGGA
AGTCACCCTGAAGACAGCAGAGGATGGACCTGACCTGGAGATGCTGAGTGGGCAGGAGCGCGTG
GCCCTGGCCAACCGCAAGCGGGAGTGTGGCAATGCCCACTACCAGCGTGCTGACTTTGTGCTGG
CTGCCAACTCCTATGACCTGGCCATCAAGGCCATCACCTCCAACGCCAAAGTGGACATGACTTG
TGAGGAGGAGGAGGAGCTGCTACAGCTGAAGGTCAAGTGTCTGAACAACCTTGCGGCATCGCAG
CTAAAGCTGGACCACTACCGAGCAGCACTGCGCTCCTGTAGCCAGGTGCTGGAGCACCAGCCAG
ACAACATCAAGGCACTGTTCCGCAAGGGCAAGGTGCTGGCTCAGCAGGGTGAATACAGTGAGGC
CATCCCCATCCTGAGGGCGGCCCTGAAGCTGGAGCCTTCCAACAAGACGATCCATGCGGAGCTC
TCAAAGCTGGTAAAGAAGCGTGCTGCACAGCGGAGCACAGAGACTGCCCTGTACCGAAAGATGC
TAGGCAACCCCAGCCGGCTGCCTGCCAAGTGTCCGGGCAAGGGTGCCTGGTCCATCCCGTGGAA
ATGGCTGTTTGGGGCAACTGCCGTGGCCCTGGGGGGCGTGGCTCTCTCTGTGGTCATTGCTGCC
AGGAACTGACTGTCCCCCTGCATACCTGGACCCCAACCTGTGCTCCCCAACTCCCCCAGGCTCC
CTGTCCACTGCCCTCCCTGGCCGAGACACCTCCTATGGGTTGGGGGAGCAAGGATTGAGGGTCG
CACACCCCAACAAGCAGGAAAGACTGAGACCCTGAAAGGGGGCATGGGGTACAGCCCAGAGGGA
GGGGCCCTGTTCCTCCAGACCCAGTTGTCTCTCTCCCACAACCCTGTTGTCCTCTGGGGTCAGG
CCTCAGCTGGGGCAGCCTCAGTTTTCCCTCAGTAGGCCTGGGGGCAGCACTACCATTCCTTCCT
GCCCGCCTGCACCCTCTGTCCAGGCTTCCCCACAGTGATTTAAATAAAGCCTCACCCCACACCC
TAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039094321 ⟹ XP_038950249

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,581 (-)	NCBI
mRatBN7.2	16	18,895,608 - 18,902,648 (-)	NCBI

RefSeq Acc Id:

XM_039094322 ⟹ XP_038950250

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,336 (-)	NCBI
mRatBN7.2	16	18,895,608 - 18,902,452 (-)	NCBI

RefSeq Acc Id:

XM_039094323 ⟹ XP_038950251

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,545 (-)	NCBI
mRatBN7.2	16	18,895,608 - 18,902,600 (-)	NCBI

RefSeq Acc Id:

XM_039094326 ⟹ XP_038950254

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,425 (-)	NCBI
mRatBN7.2	16	18,895,608 - 18,902,452 (-)	NCBI

RefSeq Acc Id:

XM_039094327 ⟹ XP_038950255

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,621 (-)	NCBI
mRatBN7.2	16	18,895,608 - 18,902,648 (-)	NCBI

RefSeq Acc Id:

XM_039094328 ⟹ XP_038950256

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,580 (-)	NCBI
mRatBN7.2	16	18,895,608 - 18,902,600 (-)	NCBI

RefSeq Acc Id:

XM_063275162 ⟹ XP_063131232

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,551 (-)	NCBI

RefSeq Acc Id:

XM_063275163 ⟹ XP_063131233

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,621 (-)	NCBI

RefSeq Acc Id:

XM_063275164 ⟹ XP_063131234

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,425 (-)	NCBI

RefSeq Acc Id:

XM_063275165 ⟹ XP_063131235

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,296 (-)	NCBI

RefSeq Acc Id:

XM_063275166 ⟹ XP_063131236

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,553 (-)	NCBI

RefSeq Acc Id:

XM_063275167 ⟹ XP_063131237

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,320 (-)	NCBI

RefSeq Acc Id:

XM_063275169 ⟹ XP_063131239

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,548 (-)	NCBI

RefSeq Acc Id:

XM_063275170 ⟹ XP_063131240

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,339 (-)	NCBI

RefSeq Acc Id:

XM_063275171 ⟹ XP_063131241

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,289 (-)	NCBI

RefSeq Acc Id:

XM_063275172 ⟹ XP_063131242

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,571 (-)	NCBI

RefSeq Acc Id:

XM_063275173 ⟹ XP_063131243

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,621 (-)	NCBI

RefSeq Acc Id:

XM_063275174 ⟹ XP_063131244

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,580 (-)	NCBI

RefSeq Acc Id:

XM_063275175 ⟹ XP_063131245

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,345 (-)	NCBI

RefSeq Acc Id:

XM_063275176 ⟹ XP_063131246

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,550 (-)	NCBI

RefSeq Acc Id:

XM_063275177 ⟹ XP_063131247

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,482 (-)	NCBI

RefSeq Acc Id:

XM_063275178 ⟹ XP_063131248

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,547 (-)	NCBI

RefSeq Acc Id:

XM_063275179 ⟹ XP_063131249

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,320 (-)	NCBI

RefSeq Acc Id:

XM_063275180 ⟹ XP_063131250

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,580 (-)	NCBI

RefSeq Acc Id:

XM_063275181 ⟹ XP_063131251

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,571 (-)	NCBI

RefSeq Acc Id:

XM_063275182 ⟹ XP_063131252

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,299 (-)	NCBI

RefSeq Acc Id:

XM_063275183 ⟹ XP_063131253

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,345 (-)	NCBI

RefSeq Acc Id:

XM_063275184 ⟹ XP_063131254

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,563 (-)	NCBI

RefSeq Acc Id:

XM_063275185 ⟹ XP_063131255

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,929,581 - 18,936,296 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001032257	(Get FASTA)	NCBI Sequence Viewer
	XP_038950249	(Get FASTA)	NCBI Sequence Viewer
	XP_038950250	(Get FASTA)	NCBI Sequence Viewer
	XP_038950251	(Get FASTA)	NCBI Sequence Viewer
	XP_038950254	(Get FASTA)	NCBI Sequence Viewer
	XP_038950255	(Get FASTA)	NCBI Sequence Viewer
	XP_038950256	(Get FASTA)	NCBI Sequence Viewer
	XP_063131232	(Get FASTA)	NCBI Sequence Viewer
	XP_063131233	(Get FASTA)	NCBI Sequence Viewer
	XP_063131234	(Get FASTA)	NCBI Sequence Viewer
	XP_063131235	(Get FASTA)	NCBI Sequence Viewer
	XP_063131236	(Get FASTA)	NCBI Sequence Viewer
	XP_063131237	(Get FASTA)	NCBI Sequence Viewer
	XP_063131239	(Get FASTA)	NCBI Sequence Viewer
	XP_063131240	(Get FASTA)	NCBI Sequence Viewer
	XP_063131241	(Get FASTA)	NCBI Sequence Viewer
	XP_063131242	(Get FASTA)	NCBI Sequence Viewer
	XP_063131243	(Get FASTA)	NCBI Sequence Viewer
	XP_063131244	(Get FASTA)	NCBI Sequence Viewer
	XP_063131245	(Get FASTA)	NCBI Sequence Viewer
	XP_063131246	(Get FASTA)	NCBI Sequence Viewer
	XP_063131247	(Get FASTA)	NCBI Sequence Viewer
	XP_063131248	(Get FASTA)	NCBI Sequence Viewer
	XP_063131249	(Get FASTA)	NCBI Sequence Viewer
	XP_063131250	(Get FASTA)	NCBI Sequence Viewer
	XP_063131251	(Get FASTA)	NCBI Sequence Viewer
	XP_063131252	(Get FASTA)	NCBI Sequence Viewer
	XP_063131253	(Get FASTA)	NCBI Sequence Viewer
	XP_063131254	(Get FASTA)	NCBI Sequence Viewer
	XP_063131255	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI07455	(Get FASTA)	NCBI Sequence Viewer
	EDL90703	(Get FASTA)	NCBI Sequence Viewer
	EDL90704	(Get FASTA)	NCBI Sequence Viewer
	EDL90705	(Get FASTA)	NCBI Sequence Viewer
	EDL90706	(Get FASTA)	NCBI Sequence Viewer
	EDL90707	(Get FASTA)	NCBI Sequence Viewer
	EDL90708	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000074539
	ENSRNOP00000074539.1
	ENSRNOP00000087668
GenBank Protein	Q3B7U9	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001032257 ⟸ NM_001037180

- UniProtKB:

Q3B7U9 (UniProtKB/Swiss-Prot), A0A8I6A3K9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASWAEPSEPAAQLLCGAPLLEGFEVLDGVDDAEEEDDLSGLPPLEDMGQPTVEEAEQPGALAR
EFLAATEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPTGSSRPLKGQVVTVHLQMSLENGTRVQ
EEPELAFTLGDCDVIQALDLSVPLMHVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLK
TAEDGPDLEMLSGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSNAKVDMTCEEEE
ELLQLKVKCLNNLAASQLKLDHYRAALRSCSQVLEHQPDNIKALFRKGKVLAQQGEYSEAIPIL
RAALKLEPSNKTIHAELSKLVKKRAAQRSTETALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFG
ATAVALGGVALSVVIAARN

hide sequence

Ensembl Acc Id:

ENSRNOP00000074539 ⟸ ENSRNOT00000077756

RefSeq Acc Id:	XP_038950255 ⟸ XM_039094327
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038950249 ⟸ XM_039094321
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038950256 ⟸ XM_039094328
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038950251 ⟸ XM_039094323
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038950254 ⟸ XM_039094326
- Peptide Label:	isoform X7
- UniProtKB:	Q3B7U9 (UniProtKB/Swiss-Prot), A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038950250 ⟸ XM_039094322
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6A3K9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000087668 ⟸ ENSRNOT00000095622

RefSeq Acc Id:	XP_063131243 ⟸ XM_063275173
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063131233 ⟸ XM_063275163
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063131244 ⟸ XM_063275174
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063131250 ⟸ XM_063275180
- Peptide Label:	isoform X7
- UniProtKB:	Q3B7U9 (UniProtKB/Swiss-Prot), A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063131251 ⟸ XM_063275181
- Peptide Label:	isoform X7
- UniProtKB:	Q3B7U9 (UniProtKB/Swiss-Prot), A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063131242 ⟸ XM_063275172
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063131254 ⟸ XM_063275184
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063131236 ⟸ XM_063275166
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063131232 ⟸ XM_063275162
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063131246 ⟸ XM_063275176
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063131239 ⟸ XM_063275169
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063131248 ⟸ XM_063275178
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063131247 ⟸ XM_063275177
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063131234 ⟸ XM_063275164
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063131253 ⟸ XM_063275183
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063131245 ⟸ XM_063275175
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063131240 ⟸ XM_063275170
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063131249 ⟸ XM_063275179
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063131237 ⟸ XM_063275167
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063131252 ⟸ XM_063275182
- Peptide Label:	isoform X7
- UniProtKB:	Q3B7U9 (UniProtKB/Swiss-Prot), A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063131255 ⟸ XM_063275185
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6A3K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063131235 ⟸ XM_063275165
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063131241 ⟸ XM_063275171
- Peptide Label:	isoform X3

Protein Domains

PPIase FKBP-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q3B7U9-F1-model_v2	AlphaFold	Q3B7U9	1-403	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700026

Promoter ID:

EPDNEW_R10549

Type:

multiple initiation site

Name:

Fkbp8_1

Description:

FK506 binding protein 8

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	16	20,652,925 - 20,652,985	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308670	AgrOrtholog
BioCyc Gene	G2FUF-11785	BioCyc
Ensembl Genes	ENSRNOG00000058359	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000077756	ENTREZGENE
	ENSRNOT00000077756.2	UniProtKB/Swiss-Prot
	ENSRNOT00000095622	ENTREZGENE
Gene3D-CATH	1.25.40.10	UniProtKB/Swiss-Prot
	3.10.50.40	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7378812	IMAGE-MGC_LOAD
InterPro	Immunophilin_FKBP-type	UniProtKB/Swiss-Prot
	PPIase_dom_sf	UniProtKB/Swiss-Prot
	PPIase_FKBP_dom	UniProtKB/Swiss-Prot
	TPR-like_helical_dom_sf	UniProtKB/Swiss-Prot
	TPR_repeat	UniProtKB/Swiss-Prot
KEGG Report	rno:290652	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:125185	IMAGE-MGC_LOAD
NCBI Gene	290652	ENTREZGENE
PANTHER	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP8	UniProtKB/Swiss-Prot
	PEPTIDYLPROLYL ISOMERASE	UniProtKB/Swiss-Prot
Pfam	FKBP_C	UniProtKB/Swiss-Prot
	TPR_16	UniProtKB/Swiss-Prot
PhenoGen	Fkbp8	PhenoGen
PROSITE	FKBP_PPIASE	UniProtKB/Swiss-Prot
	TPR	UniProtKB/Swiss-Prot
	TPR_REGION	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000058359	RatGTEx
SMART	TPR	UniProtKB/Swiss-Prot
Superfamily-SCOP	FKBP-like	UniProtKB/Swiss-Prot
	SSF48452	UniProtKB/Swiss-Prot
UniProt	A0A8I6A3K9	ENTREZGENE, UniProtKB/TrEMBL
	A6KA29_RAT	UniProtKB/TrEMBL
	A6KA30_RAT	UniProtKB/TrEMBL
	A6KA33_RAT	UniProtKB/TrEMBL
	FKBP8_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-11-09	Fkbp8	FKBP prolyl isomerase 8	Fkbp8	FK506 binding protein 8	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2009-10-22	Fkbp8	FK506 binding protein 8	Fkbp8	FK506 binding protein 8, 38kDa	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-24	Fkbp8	FK506 binding protein 8, 38kDa	Fkbp8	FK506 binding protein 8	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	Fkbp8	FK506 binding protein 8	Fkbp8_predicted	FK506 binding protein 8 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Fkbp8_predicted	FK506 binding protein 8 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - MGI

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI