Tasp1 (taspase 1) - Rat Genome Database

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Gene: Tasp1 (taspase 1) Rattus norvegicus
Analyze
Symbol: Tasp1
Name: taspase 1
RGD ID: 1308591
Description: Predicted to enable identical protein binding activity and threonine-type endopeptidase activity. Predicted to be involved in positive regulation of DNA-templated transcription and proteolysis. Orthologous to human TASP1 (taspase 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC311468; MGC125209; RGD1308591; similar to 4930485D02Rik protein; taspase, threonine aspartase 1; threonine aspartase 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: Tasp1Tn(sb-T2/Bart3)2.219Mcwi  
Genetic Models: F344-Tasp1Tn(sb-T2/Bart3)2.219Mcwi
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83147,630,092 - 147,861,710 (-)NCBIGRCr8
mRatBN7.23127,176,416 - 127,408,039 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3127,176,692 - 127,399,600 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3131,032,864 - 131,255,561 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03139,616,956 - 139,839,650 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03137,320,092 - 137,542,788 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03132,888,785 - 133,131,213 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3132,888,772 - 133,131,192 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03139,347,611 - 139,588,372 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43128,002,479 - 128,228,127 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13127,907,732 - 128,133,709 (-)NCBI
Celera3125,825,868 - 126,047,420 (-)NCBICelera
Cytogenetic Map3q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12477932   PMID:14636557   PMID:16216576   PMID:22829979  


Genomics

Comparative Map Data
Tasp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83147,630,092 - 147,861,710 (-)NCBIGRCr8
mRatBN7.23127,176,416 - 127,408,039 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3127,176,692 - 127,399,600 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3131,032,864 - 131,255,561 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03139,616,956 - 139,839,650 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03137,320,092 - 137,542,788 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03132,888,785 - 133,131,213 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3132,888,772 - 133,131,192 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03139,347,611 - 139,588,372 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43128,002,479 - 128,228,127 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13127,907,732 - 128,133,709 (-)NCBI
Celera3125,825,868 - 126,047,420 (-)NCBICelera
Cytogenetic Map3q36NCBI
TASP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382013,104,772 - 13,638,932 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2013,389,392 - 13,638,932 (-)EnsemblGRCh38hg38GRCh38
GRCh372013,370,041 - 13,619,579 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362013,318,036 - 13,567,583 (-)NCBINCBI36Build 36hg18NCBI36
Build 342013,318,038 - 13,558,799NCBI
Celera2013,440,107 - 13,689,648 (-)NCBICelera
Cytogenetic Map20p12.1NCBI
HuRef2013,324,503 - 13,574,057 (-)NCBIHuRef
CHM1_12013,370,132 - 13,618,116 (-)NCBICHM1_1
T2T-CHM13v2.02013,148,109 - 13,682,349 (-)NCBIT2T-CHM13v2.0
Tasp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392139,675,399 - 139,908,767 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2139,675,400 - 139,908,725 (-)EnsemblGRCm39 Ensembl
GRCm382139,833,479 - 140,066,847 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2139,833,480 - 140,066,805 (-)EnsemblGRCm38mm10GRCm38
MGSCv372139,659,216 - 139,892,521 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362139,525,027 - 139,758,201 (-)NCBIMGSCv36mm8
Celera2141,009,953 - 141,252,432 (-)NCBICelera
Cytogenetic Map2F3NCBI
cM Map269.2NCBI
Tasp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541522,855,822 - 23,091,732 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541522,856,382 - 23,091,732 (-)NCBIChiLan1.0ChiLan1.0
TASP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22114,277,972 - 14,527,701 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12014,274,800 - 14,524,549 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02013,350,135 - 13,599,861 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12013,335,443 - 13,584,376 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2013,335,443 - 13,584,378 (-)Ensemblpanpan1.1panPan2
TASP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1249,001,175 - 9,314,212 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl249,001,246 - 9,324,695 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha248,813,171 - 9,126,408 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0249,414,188 - 9,728,318 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl249,414,289 - 9,738,817 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1249,013,582 - 9,338,011 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0249,109,971 - 9,423,426 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0249,458,664 - 9,772,420 (+)NCBIUU_Cfam_GSD_1.0
Tasp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640157,732,386 - 158,028,997 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364856,163,809 - 6,460,360 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364856,163,809 - 6,460,361 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TASP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1722,083,819 - 22,357,476 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11721,963,369 - 22,358,444 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21724,534,792 - 24,918,068 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TASP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1242,284,264 - 42,529,551 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl242,283,687 - 42,529,488 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660542,556,617 - 2,806,243 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tasp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474114,352,360 - 14,633,373 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474114,341,076 - 14,633,441 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tasp1
865 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:78
Count of miRNA genes:66
Interacting mature miRNAs:76
Transcripts:ENSRNOT00000055630
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312673Scl63Serum cholesterol level QTL 630.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)398535255168026850Rat
1598877Bp285Blood pressure QTL 2851.50.03arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3120538241165538241Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)398535386161695835Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)331172320163586636Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)347233211147415807Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)338192233133483320Rat
1581568Rf53Renal function QTL 53urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)356395968161299569Rat
7387306Bw124Body weight QTL 1243.20.0003body mass (VT:0001259)body weight (CMO:0000012)384091273129091273Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3112681431157681431Rat
1300173Rf11Renal function QTL 113.38renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)3121056165145956249Rat
8694437Bw167Body weight QTL 16722.460.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)391797474136797474Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3122438700167438700Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)359242096157323038Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)343827364169034231Rat
1354611Despr2Despair related QTL 23.030.0028locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)397084464142084464Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3127162703168026850Rat
631649Bp123Blood pressure QTL 1233.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)389772419134772419Rat
631841Niddm39Non-insulin dependent diabetes mellitus QTL 393.36blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)394856903159898684Rat
1358204Insglur1Insulin/glucose ratio QTL 13.8blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)3115638168135181505Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3118839124163839124Rat
619618Rf3Renal disease susceptibility QTL 36.50.001urine albumin amount (VT:0002871)urine albumin excretion rate to body weight ratio (CMO:0001270)3107693393152693393Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3121056165157309487Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)341874578155617519Rat
2312659Slep7Serum leptin concentration QTL 70.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)398535255168026850Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)341874578155617519Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)378196190146592722Rat
1331758Bp207Blood pressure QTL 2072.848arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3112287552135181505Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3124122556169034231Rat
2293087Iddm27Insulin dependent diabetes mellitus QTL 272.68blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)397551417147415807Rat
2312670Bw94Body weight QTL 940.01inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)398535255168026850Rat
724532Cm17Cardiac mass QTL 172heart mass (VT:0007028)calculated heart weight (CMO:0000073)395735366140735366Rat

Markers in Region
RH140780  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23127,201,445 - 127,201,649 (+)MAPPERmRatBN7.2
mRatBN7.21232,662,676 - 32,662,858 (+)MAPPERmRatBN7.2
Rnor_6.01238,095,882 - 38,096,063NCBIRnor6.0
Rnor_6.03132,913,832 - 132,914,035NCBIRnor6.0
Rnor_5.01239,967,088 - 39,967,269UniSTSRnor5.0
Rnor_5.03139,372,508 - 139,372,711UniSTSRnor5.0
RGSC_v3.43128,028,504 - 128,028,707UniSTSRGSC3.4
RGSC_v3.41233,797,460 - 33,797,641UniSTSRGSC3.4
Celera1234,350,265 - 34,350,446UniSTS
Celera3125,849,602 - 125,849,805UniSTS
RH 3.4 Map12574.12UniSTS
Cytogenetic Map3q36-q41UniSTS
Cytogenetic Map12q15UniSTS
AI396692  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23127,382,918 - 127,383,651 (+)MAPPERmRatBN7.2
Rnor_6.03133,106,044 - 133,106,776NCBIRnor6.0
Rnor_5.03139,563,633 - 139,564,365UniSTSRnor5.0
RGSC_v3.43128,211,460 - 128,212,192UniSTSRGSC3.4
Celera3126,030,852 - 126,031,584UniSTS
Cytogenetic Map3q36-q41UniSTS


Genetic Models
This gene Tasp1 is modified in the following models/strains:
F344-Tasp1Tn(sb-T2/Bart3)2.219Mcwi    


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001044243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063283786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063283787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063283788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063283789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063283790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063283791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063283792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063283793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC105618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000055630   ⟹   ENSRNOP00000052492
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3127,176,692 - 127,399,600 (-)Ensembl
Rnor_6.0 Ensembl3132,888,772 - 133,131,192 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000083637   ⟹   ENSRNOP00000075239
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3127,176,692 - 127,399,600 (-)Ensembl
Rnor_6.0 Ensembl3132,889,661 - 133,122,691 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000100555   ⟹   ENSRNOP00000084563
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3127,176,692 - 127,399,600 (-)Ensembl
RefSeq Acc Id: NM_001044243   ⟹   NP_001037708
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,366 - 147,853,264 (-)NCBI
mRatBN7.23127,176,690 - 127,399,600 (-)NCBI
Rnor_6.03132,889,059 - 133,122,755 (-)NCBI
Rnor_5.03139,347,611 - 139,588,372 (-)NCBI
RGSC_v3.43128,002,479 - 128,228,127 (-)RGD
Celera3125,825,868 - 126,047,420 (-)RGD
Sequence:
RefSeq Acc Id: XM_017591759   ⟹   XP_017447248
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,861,644 (-)NCBI
mRatBN7.23127,176,416 - 127,407,938 (-)NCBI
Rnor_6.03132,888,785 - 133,131,139 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039105020   ⟹   XP_038960948
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,861,702 (-)NCBI
mRatBN7.23127,176,416 - 127,408,039 (-)NCBI
RefSeq Acc Id: XM_039105021   ⟹   XP_038960949
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,861,710 (-)NCBI
mRatBN7.23127,176,416 - 127,408,039 (-)NCBI
RefSeq Acc Id: XM_039105026   ⟹   XP_038960954
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,861,689 (-)NCBI
mRatBN7.23127,176,416 - 127,408,038 (-)NCBI
RefSeq Acc Id: XM_039105027   ⟹   XP_038960955
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,844,513 (-)NCBI
mRatBN7.23127,176,416 - 127,390,849 (-)NCBI
RefSeq Acc Id: XM_039105028   ⟹   XP_038960956
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,787,170 (-)NCBI
mRatBN7.23127,176,416 - 127,333,515 (-)NCBI
RefSeq Acc Id: XM_063283786   ⟹   XP_063139856
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,861,661 (-)NCBI
RefSeq Acc Id: XM_063283787   ⟹   XP_063139857
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,861,644 (-)NCBI
RefSeq Acc Id: XM_063283788   ⟹   XP_063139858
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,861,644 (-)NCBI
RefSeq Acc Id: XM_063283789   ⟹   XP_063139859
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,861,644 (-)NCBI
RefSeq Acc Id: XM_063283790   ⟹   XP_063139860
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,861,684 (-)NCBI
RefSeq Acc Id: XM_063283791   ⟹   XP_063139861
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,861,644 (-)NCBI
RefSeq Acc Id: XM_063283792   ⟹   XP_063139862
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,853,194 (-)NCBI
RefSeq Acc Id: XM_063283793   ⟹   XP_063139863
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,630,092 - 147,861,644 (-)NCBI
RefSeq Acc Id: XR_010064631
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,657,361 - 147,861,644 (-)NCBI
RefSeq Acc Id: XR_010064632
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83147,657,361 - 147,861,644 (-)NCBI
RefSeq Acc Id: NP_001037708   ⟸   NM_001044243
- UniProtKB: Q0VGK5 (UniProtKB/TrEMBL),   A6HQL8 (UniProtKB/TrEMBL),   A0A8I5ZZW5 (UniProtKB/TrEMBL),   F7F9N0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017447248   ⟸   XM_017591759
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZZW5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000052492   ⟸   ENSRNOT00000055630
Ensembl Acc Id: ENSRNOP00000075239   ⟸   ENSRNOT00000083637
RefSeq Acc Id: XP_038960949   ⟸   XM_039105021
- Peptide Label: isoform X2
- UniProtKB: Q0VGK5 (UniProtKB/TrEMBL),   A6HQL8 (UniProtKB/TrEMBL),   A0A8I5ZZW5 (UniProtKB/TrEMBL),   F7F9N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038960948   ⟸   XM_039105020
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZZW5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038960954   ⟸   XM_039105026
- Peptide Label: isoform X8
- UniProtKB: A0A8I5ZZW5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038960955   ⟸   XM_039105027
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038960956   ⟸   XM_039105028
- Peptide Label: isoform X10
Ensembl Acc Id: ENSRNOP00000084563   ⟸   ENSRNOT00000100555
RefSeq Acc Id: XP_063139860   ⟸   XM_063283790
- Peptide Label: isoform X5
- UniProtKB: A0A8I5ZZW5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063139856   ⟸   XM_063283786
- Peptide Label: isoform X2
- UniProtKB: A6HQL8 (UniProtKB/TrEMBL),   F7F9N0 (UniProtKB/TrEMBL),   Q0VGK5 (UniProtKB/TrEMBL),   A0A8I5ZZW5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063139863   ⟸   XM_063283793
- Peptide Label: isoform X8
- UniProtKB: A0A8I5ZZW5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063139861   ⟸   XM_063283791
- Peptide Label: isoform X6
- UniProtKB: A0A0G2KA32 (UniProtKB/TrEMBL),   A0A8I5ZZW5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063139859   ⟸   XM_063283789
- Peptide Label: isoform X5
- UniProtKB: A0A8I5ZZW5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063139858   ⟸   XM_063283788
- Peptide Label: isoform X4
- UniProtKB: A0A8I5ZZW5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063139857   ⟸   XM_063283787
- Peptide Label: isoform X3
- UniProtKB: A0A8I5ZZW5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063139862   ⟸   XM_063283792
- Peptide Label: isoform X7
- UniProtKB: A0A8I5ZZW5 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q0VGK5-F1-model_v2 AlphaFold Q0VGK5 1-420 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692469
Promoter ID:EPDNEW_R2994
Type:multiple initiation site
Name:Tasp1_1
Description:taspase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.03133,131,175 - 133,131,235EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308591 AgrOrtholog
BioCyc Gene G2FUF-47667 BioCyc
Ensembl Genes ENSRNOG00000004493 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000055630.4 UniProtKB/TrEMBL
  ENSRNOT00000083637.2 UniProtKB/TrEMBL
  ENSRNOT00000100555.1 UniProtKB/TrEMBL
Gene3D-CATH (Glycosyl)asparaginase UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7453153 IMAGE-MGC_LOAD
InterPro Ntn_hydrolases_N UniProtKB/TrEMBL
  Peptidase_T2 UniProtKB/TrEMBL
  Taspase1 UniProtKB/TrEMBL
KEGG Report rno:311468 UniProtKB/TrEMBL
MGC_CLONE MGC:125209 IMAGE-MGC_LOAD
NCBI Gene 311468 ENTREZGENE
PANTHER Peptidase_T2 UniProtKB/TrEMBL
  THREONINE ASPARTASE 1 UniProtKB/TrEMBL
Pfam Asparaginase_2 UniProtKB/TrEMBL
PhenoGen Tasp1 PhenoGen
RatGTEx ENSRNOG00000004493 RatGTEx
Superfamily-SCOP SSF56235 UniProtKB/TrEMBL
UniProt A0A0G2KA32 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZZW5 ENTREZGENE, UniProtKB/TrEMBL
  A6HQL8 ENTREZGENE, UniProtKB/TrEMBL
  F7F9N0 ENTREZGENE, UniProtKB/TrEMBL
  Q0VGK5 ENTREZGENE
UniProt Secondary Q0VGK5 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Tasp1  taspase, threonine aspartase 1   Tasp1_predicted  taspase, threonine aspartase 1 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Tasp1_predicted  taspase, threonine aspartase 1 (predicted)  RGD1308591_predicted  similar to 4930485D02Rik protein (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-20 RGD1308591_predicted  similar to 4930485D02Rik protein (predicted)  LOC311468_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC311468_predicted  similar to 4930485D02Rik protein (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL