Oasl (2'-5'-oligoadenylate synthetase-like) - Rat Genome Database

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Gene: Oasl (2'-5'-oligoadenylate synthetase-like) Rattus norvegicus
Analyze
Symbol: Oasl
Name: 2'-5'-oligoadenylate synthetase-like
RGD ID: 1308586
Description: Predicted to enable DNA binding activity and double-stranded RNA binding activity. Predicted to be involved in several processes, including innate immune response; interleukin-27-mediated signaling pathway; and positive regulation of RIG-I signaling pathway. Predicted to be located in cytoplasm and nucleolus. Predicted to be active in cytosol; membrane; and nucleoplasm. Orthologous to human OASL (2'-5'-oligoadenylate synthetase like); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 2'-5' oligoadenylate synthetase-like 1; 2'-5'-oligoadenylate synthase-like protein 1; 59 kDa 2'-5'-oligoadenylate synthase-like protein; LOC304545; Oasl1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81247,343,551 - 47,356,509 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1247,343,551 - 47,356,483 (-)EnsemblGRCr8
mRatBN7.21241,682,900 - 41,695,641 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1241,682,900 - 41,695,641 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1242,851,797 - 42,864,166 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01243,465,379 - 43,477,747 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01242,525,863 - 42,538,230 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01247,444,138 - 47,456,680 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1247,444,104 - 47,456,894 (-)Ensemblrn6Rnor6.0
Rnor_5.01249,237,542 - 49,249,899 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41242,956,466 - 42,969,826 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1243,299,991 - 43,312,040 (-)NCBICelera
RGSC_v3.11242,819,853 - 42,833,214 (-)NCBI
Cytogenetic Map12q16NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1-nitropyrene  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3,3',5,5'-tetrabromobisphenol A  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (EXP)
6alpha-methylprednisolone  (ISO)
acetamide  (EXP)
Actein  (EXP)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
astemizole  (EXP)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
beta-lapachone  (ISO)
beta-naphthoflavone  (EXP)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
cannabidiol  (ISO)
captan  (ISO)
carbon nanotube  (ISO)
chenodeoxycholic acid  (ISO)
chloroprene  (EXP)
chromium(6+)  (ISO)
ciguatoxin CTX1B  (ISO)
clofibrate  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
cyproconazole  (ISO)
D-glucose  (ISO)
deoxycholic acid  (ISO)
dexamethasone  (ISO)
dieldrin  (EXP)
dioxygen  (EXP)
disulfiram  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
epoxiconazole  (ISO)
fenofibrate  (ISO)
fentanyl  (EXP)
ferric oxide  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
fructose  (ISO)
furan  (EXP)
Genipin  (ISO)
gentamycin  (EXP)
glucose  (ISO)
glycochenodeoxycholic acid  (ISO)
glycocholic acid  (ISO)
glycodeoxycholic acid  (ISO)
glyphosate  (ISO)
hydroquinone  (ISO)
imidacloprid  (EXP)
Indeno[1,2,3-cd]pyrene  (ISO)
lidocaine  (EXP)
lipopolysaccharide  (ISO)
manganese(II) chloride  (EXP)
N-nitrosodiethylamine  (EXP)
N-Nitrosopyrrolidine  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
nitrates  (ISO)
okadaic acid  (ISO)
oxaliplatin  (EXP)
paracetamol  (EXP)
paraquat  (EXP)
pentachlorophenol  (ISO)
pentanal  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
poly(I:C)  (ISO)
prednisolone  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
propanal  (ISO)
propiconazole  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
serpentine asbestos  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium aurothiomalate  (ISO)
sotorasib  (ISO)
succimer  (ISO)
tamibarotene  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
Tesaglitazar  (EXP)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
topotecan  (EXP)
trametinib  (ISO)
trichloroethene  (EXP)
triclosan  (ISO)
trimellitic anhydride  (EXP)
triphenyl phosphate  (ISO)
Triptolide  (EXP)
triptonide  (ISO)
troglitazone  (ISO)
trovafloxacin  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA,ISO,ISS)
cytosol  (IBA,ISO)
membrane  (IBA)
nucleolus  (IEA,ISO,ISS)
nucleoplasm  (IBA,ISO)
nucleus  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9826176   PMID:12396720   PMID:12799444   PMID:18931074   PMID:19946888   PMID:20074559   PMID:21478870   PMID:22658674  


Genomics

Comparative Map Data
Oasl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81247,343,551 - 47,356,509 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1247,343,551 - 47,356,483 (-)EnsemblGRCr8
mRatBN7.21241,682,900 - 41,695,641 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1241,682,900 - 41,695,641 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1242,851,797 - 42,864,166 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01243,465,379 - 43,477,747 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01242,525,863 - 42,538,230 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01247,444,138 - 47,456,680 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1247,444,104 - 47,456,894 (-)Ensemblrn6Rnor6.0
Rnor_5.01249,237,542 - 49,249,899 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41242,956,466 - 42,969,826 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1243,299,991 - 43,312,040 (-)NCBICelera
RGSC_v3.11242,819,853 - 42,833,214 (-)NCBI
Cytogenetic Map12q16NCBI
OASL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812121,017,761 - 121,039,246 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12121,017,763 - 121,039,246 (-)Ensemblhg38GRCh38
GRCh3712121,455,564 - 121,477,049 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612119,942,478 - 119,961,163 (-)NCBIBuild 36Build 36hg18NCBI36
Build 3412119,920,814 - 119,939,500NCBI
Celera12121,093,993 - 121,112,685 (-)NCBICelera
Cytogenetic Map12q24.31NCBI
HuRef12118,466,707 - 118,485,667 (-)NCBIHuRef
CHM1_112121,426,902 - 121,445,860 (-)NCBICHM1_1
T2T-CHM13v2.012121,007,355 - 121,028,848 (-)NCBIT2T-CHM13v2.0
Oasl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395115,061,236 - 115,075,970 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5115,061,299 - 115,075,974 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm385114,923,143 - 114,937,911 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5114,923,240 - 114,937,915 (+)Ensemblmm10GRCm38
MGSCv375115,373,249 - 115,387,920 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv365115,184,239 - 115,198,910 (+)NCBIMGSCv36mm8
Celera5112,017,951 - 112,032,747 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map555.99NCBI
Oasl
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545510,657,440 - 10,682,546 (+)Ensembl
ChiLan1.0NW_00495545510,658,080 - 10,682,493 (+)NCBIChiLan1.0ChiLan1.0
OASL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210129,087,084 - 129,109,368 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112129,083,453 - 129,105,748 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012118,602,088 - 118,621,056 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112121,971,880 - 121,990,855 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12121,971,880 - 121,990,855 (-)EnsemblpanPan2panpan1.1
OASL
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12616,837,376 - 16,850,388 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2616,837,376 - 16,850,388 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2616,839,845 - 16,852,873 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02617,103,755 - 17,116,850 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2617,103,755 - 17,116,850 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12617,064,123 - 17,077,157 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02617,139,240 - 17,152,303 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02617,181,921 - 17,194,967 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Oasl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118145,545,542 - 145,551,196 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493666843,960 - 50,246 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OASL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1440,899,856 - 40,917,266 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11440,900,050 - 40,917,189 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21443,414,434 - 43,431,814 (-)NCBISscrofa10.2Sscrofa10.2susScr3
OASL
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111116,376,806 - 116,396,239 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl11116,376,217 - 116,395,945 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666037128,700,747 - 128,720,895 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Oasl
93 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:54
Count of miRNA genes:46
Interacting mature miRNAs:51
Transcripts:ENSRNOT00000001570
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)121914436246669029Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
8693635Alc28Alcohol consumption QTL 282.70.439drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)122308134044726024Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411643Foco20Food consumption QTL 200.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)122032881946669029Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)121961087046669029Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961087042828880Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101318273646669029Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121319815746669029Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
1300162Bp188Blood pressure QTL 1883.19arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)123210317445899022Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
1549902Bp269Blood pressure QTL 269arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121318273646669029Rat
1600386Calcic2Intracellular calcium level QTL 20.001platelet physiology trait (VT:0005464)platelet intracellular calcium level (CMO:0000922)122806443346669029Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121235161946669029Rat
1300175Cm5Cardiac mass QTL 53.78heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)122806443345899022Rat
8693658Alc33Alcohol consumption QTL 332.10.68drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)122308134043551788Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121047413746669029Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382545055165Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121281238546669029Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121047413746669029Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000001570   ⟹   ENSRNOP00000001570
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1247,343,551 - 47,356,483 (-)Ensembl
mRatBN7.2 Ensembl1241,682,900 - 41,695,641 (-)Ensembl
Rnor_6.0 Ensembl1247,444,104 - 47,456,894 (-)Ensembl
RefSeq Acc Id: NM_001009681   ⟹   NP_001009681
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81247,343,551 - 47,356,292 (-)NCBI
mRatBN7.21241,682,900 - 41,695,641 (-)NCBI
Rnor_6.01247,444,138 - 47,456,160 (-)NCBI
Rnor_5.01249,237,542 - 49,249,899 (-)NCBI
RGSC_v3.41242,956,466 - 42,969,826 (-)RGD
Celera1243,299,991 - 43,312,040 (-)RGD
Sequence:
RefSeq Acc Id: XM_063271353   ⟹   XP_063127423
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81247,345,300 - 47,356,509 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001009681 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127423 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAP55510 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000001570
  ENSRNOP00000001570.3
GenBank Protein G3V645 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001009681   ⟸   NM_001009681
- UniProtKB: Q5MYW3 (UniProtKB/Swiss-Prot),   G3V645 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000001570   ⟸   ENSRNOT00000001570
RefSeq Acc Id: XP_063127423   ⟸   XM_063271353
- Peptide Label: isoform X1
Protein Domains
Ubiquitin-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-G3V645-F1-model_v2 AlphaFold G3V645 1-512 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698705
Promoter ID:EPDNEW_R9229
Type:single initiation site
Name:Oasl_1
Description:2'-5'-oligoadenylate synthetase-like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01247,456,158 - 47,456,218EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308586 AgrOrtholog
BioCyc Gene G2FUF-18968 BioCyc
Ensembl Genes ENSRNOG00000001187 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000001570 ENTREZGENE
  ENSRNOT00000001570.5 UniProtKB/Swiss-Prot
Gene3D-CATH 2'-5'-oligoadenylate synthetase 1, domain 2 UniProtKB/Swiss-Prot
  3.30.460.10 UniProtKB/Swiss-Prot
  Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1 UniProtKB/Swiss-Prot
InterPro 2-5-oligoadenylate_synth_CS UniProtKB/Swiss-Prot
  2-5-oligoadenylate_synth_N UniProtKB/Swiss-Prot
  2-5-oligoAdlate_synth_1_dom2/C UniProtKB/Swiss-Prot
  NT_sf UniProtKB/Swiss-Prot
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot
  Ubiquitin_dom UniProtKB/Swiss-Prot
KEGG Report rno:304545 UniProtKB/Swiss-Prot
NCBI Gene 304545 ENTREZGENE
PANTHER 2'-5'-OLIGOADENYLATE SYNTHASE-LIKE PROTEIN UniProtKB/Swiss-Prot
  PTHR11258 UniProtKB/Swiss-Prot
Pfam OAS1_C UniProtKB/Swiss-Prot
  ubiquitin UniProtKB/Swiss-Prot
PhenoGen Oasl PhenoGen
PROSITE 25A_SYNTH_2 UniProtKB/Swiss-Prot
  25A_SYNTH_3 UniProtKB/Swiss-Prot
  UBIQUITIN_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000001187 RatGTEx
SMART UBQ UniProtKB/Swiss-Prot
Superfamily-SCOP PAP/OAS1 substrate-binding domain UniProtKB/Swiss-Prot
  SSF54236 UniProtKB/Swiss-Prot
  SSF81301 UniProtKB/Swiss-Prot
UniProt G3V645 ENTREZGENE, UniProtKB/Swiss-Prot
  Q5MYW3 ENTREZGENE
UniProt Secondary Q5MYW3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-09-09 Oasl  2'-5'-oligoadenylate synthetase-like  Oasl1  2'-5' oligoadenylate synthetase-like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Oasl1  2'-5' oligoadenylate synthetase-like 1  Oasl1_predicted  2'-5' oligoadenylate synthetase-like 1 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Oasl1_predicted  2'-5' oligoadenylate synthetase-like 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED