Tmem126b (transmembrane protein 126B) - Rat Genome Database

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Gene: Tmem126b (transmembrane protein 126B) Rattus norvegicus
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Symbol: Tmem126b
Name: transmembrane protein 126B
RGD ID: 1308371
Description: Predicted to be involved in mitochondrial respiratory chain complex I assembly. Predicted to act upstream of or within mitochondrion organization and response to food. Predicted to be located in mitochondrial membrane. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 29. Orthologous to human TMEM126B (transmembrane protein 126B); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: complex I assembly factor TMEM126B, mitochondrial; hypothetical LOC293114; LOC293114; RGD1308371
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81153,852,081 - 153,864,038 (-)NCBIGRCr8
mRatBN7.21144,437,142 - 144,451,508 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1144,437,145 - 144,451,435 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1152,362,342 - 152,374,182 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01159,543,501 - 159,555,360 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01152,417,418 - 152,429,275 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01156,262,220 - 156,274,207 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1156,262,031 - 156,275,002 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01162,508,342 - 162,520,329 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41147,146,180 - 147,158,120 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11147,224,580 - 147,236,535 (-)NCBI
Celera1142,659,948 - 142,671,836 (-)NCBICelera
Cytogenetic Map1q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12477932   PMID:22982022   PMID:27374773  


Genomics

Comparative Map Data
Tmem126b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81153,852,081 - 153,864,038 (-)NCBIGRCr8
mRatBN7.21144,437,142 - 144,451,508 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1144,437,145 - 144,451,435 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1152,362,342 - 152,374,182 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01159,543,501 - 159,555,360 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01152,417,418 - 152,429,275 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01156,262,220 - 156,274,207 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1156,262,031 - 156,275,002 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01162,508,342 - 162,520,329 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41147,146,180 - 147,158,120 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11147,224,580 - 147,236,535 (-)NCBI
Celera1142,659,948 - 142,671,836 (-)NCBICelera
Cytogenetic Map1q32NCBI
TMEM126B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381185,628,573 - 85,636,540 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1185,628,573 - 85,636,539 (+)EnsemblGRCh38hg38GRCh38
GRCh371185,339,617 - 85,347,584 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361185,017,310 - 85,025,186 (+)NCBINCBI36Build 36hg18NCBI36
Celera1182,648,936 - 82,656,897 (+)NCBICelera
Cytogenetic Map11q14.1NCBI
HuRef1181,636,910 - 81,644,876 (+)NCBIHuRef
CHM1_11185,224,408 - 85,232,374 (+)NCBICHM1_1
T2T-CHM13v2.01185,565,250 - 85,573,217 (+)NCBIT2T-CHM13v2.0
Tmem126b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39790,118,041 - 90,125,203 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl790,116,646 - 90,125,209 (-)EnsemblGRCm39 Ensembl
GRCm38790,468,833 - 90,475,995 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl790,467,438 - 90,476,001 (-)EnsemblGRCm38mm10GRCm38
MGSCv37797,617,343 - 97,624,505 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36790,344,020 - 90,351,187 (-)NCBIMGSCv36mm8
Celera787,796,285 - 87,803,452 (-)NCBICelera
Cytogenetic Map7E1NCBI
cM Map750.6NCBI
Tmem126b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554147,234,610 - 7,245,519 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554147,235,864 - 7,245,595 (-)NCBIChiLan1.0ChiLan1.0
TMEM126B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2986,551,619 - 86,559,558 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11187,602,591 - 87,610,529 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01180,684,485 - 80,692,441 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11184,293,117 - 84,301,032 (+)NCBIpanpan1.1PanPan1.1panPan2
TMEM126B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12113,813,669 - 13,820,389 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2113,813,783 - 13,820,314 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2113,680,242 - 13,686,980 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02113,994,361 - 14,001,071 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12113,782,862 - 13,789,592 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02113,855,169 - 13,861,878 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02113,907,994 - 13,914,733 (-)NCBIUU_Cfam_GSD_1.0
Tmem126b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494771,920,242 - 71,927,159 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649813,519,851 - 13,529,032 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649813,519,751 - 13,526,770 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM126B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl919,547,647 - 19,556,793 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1919,547,664 - 19,555,247 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2921,817,760 - 21,825,894 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM126B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1176,869,434 - 76,876,282 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl176,869,431 - 76,876,342 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604348,849,640 - 48,856,500 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem126b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248454,302,262 - 4,309,111 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tmem126b
96 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:15
Count of miRNA genes:14
Interacting mature miRNAs:15
Transcripts:ENSRNOT00000038279
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)157336763151090257Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
724529Cm16Cardiac mass QTL 162.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)187580395150700247Rat
724521Uae1Urinary albumin excretion QTL 13.80.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)190508614173018436Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)190508614180359386Rat
1331793Bp200Blood pressure QTL 2003.71601arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194494440172949803Rat
1331751Bp199Blood pressure QTL 1993.60022arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)194494440181830018Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)194494440198211706Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)194494440198324465Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194642644214537671Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1100357752183970443Rat
2317833Alcrsp19Alcohol response QTL 1912.40.001response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1100979852145979852Rat
1641897Alcrsp1Alcohol response QTL 1response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1100979852145979852Rat
2303591Gluco41Glucose level QTL 412blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1102168504147168504Rat
61370Mcs3Mammary carcinoma susceptibility QTL 32.15mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1102268556147268556Rat
1354623Rf46Renal function QTL 463.8blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)1102813953151162766Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1102813953201278233Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1102813953201278233Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1102813953218753816Rat
9590300Scort16Serum corticosterone level QTL 164.390.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1103111621148111621Rat
8694370Bw154Body weight QTL 1548.910.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)1103111621148111621Rat
631496Bp97Blood pressure QTL 973.08arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1106047847151047847Rat
1300158Bp173Blood pressure QTL 1733.48arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1115540693185145286Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
631199Cm23Cardiac mass QTL 234.60.0004heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1115585465172949803Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118608292241799120Rat
2313060Bss71Bone structure and strength QTL 712.60.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)1118944747163944747Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118944897199050459Rat
1598850Bp297Blood pressure QTL 2972.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
1598866Bp287Blood pressure QTL 2875.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
61442Strs1Sensitivity to stroke QTL 17.4cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)1121767634166767634Rat
2293140Bp313Blood pressure QTL 313arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121833674166833674Rat
631544Bp84Blood pressure QTL 845.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350408181759564Rat
1358189Cstrr1Cold stress response QTL 10.0001catecholamine amount (VT:0010543)urine norepinephrine level (CMO:0001629)1123350408182418476Rat
1641895Bp298Blood pressure QTL 298arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1123350408182418476Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1123350408182418476Rat
631549Bp89Blood pressure QTL 895.7arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350581201284552Rat
634348Bp138Blood pressure QTL 138arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501168883176Rat
9685799Bp375Blood pressure QTL 375arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
631654Bp107Blood pressure QTL 107arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
9685802Bp376Blood pressure QTL 376arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1126540680171540680Rat
738006Anxrr14Anxiety related response QTL 1440.00035locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1130636910175636910Rat
738028Anxrr12Anxiety related response QTL 124.90.00001locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1130636910175636910Rat
631202Gluco13Glucose level QTL 130.0001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1131763437159756369Rat
6893347Bw98Body weight QTL 980.20.53body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
6893361Bw104Body weight QTL 1040.590.27body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
1558645Bw55Body weight QTL 553.20.004body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
631206Niddm40Non-insulin dependent diabetes mellitus QTL 40blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1136745990163747690Rat
71118Thym1Thymus enlargement QTL 110.170.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
724550Thym3Thymus enlargement QTL 37.820.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1136830018181830018Rat
1598853Memor3Memory QTL 34.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)1143506580212458660Rat
61348Bp30Blood pressure QTL 302.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1144017057197814409Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1144267353196383668Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1144267353222987745Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
634315Niddm45Non-insulin dependent diabetes mellitus QTL 457.16blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1144267916172949660Rat
61379Bp44Blood pressure QTL 4419.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1144267916174133260Rat

Markers in Region
RH137624  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21144,446,323 - 144,446,463 (-)MAPPERmRatBN7.2
Rnor_6.01156,267,196 - 156,267,335NCBIRnor6.0
Rnor_5.01162,513,318 - 162,513,457UniSTSRnor5.0
RGSC_v3.41147,153,005 - 147,153,144UniSTSRGSC3.4
Celera1142,666,721 - 142,666,860UniSTS
Cytogenetic Map1q32UniSTS
G42651  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21144,452,230 - 144,453,320 (-)MAPPERmRatBN7.2
Rnor_6.01156,260,339 - 156,261,428NCBIRnor6.0
Rnor_5.01162,506,461 - 162,507,550UniSTSRnor5.0
RGSC_v3.41147,158,912 - 147,160,001UniSTSRGSC3.4
Celera1142,672,628 - 142,673,717UniSTS
Cytogenetic Map1q32UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 2 29 24 20 7 20 8 11 74 35 41 11 8
Low 1 14 33 21 12 21
Below cutoff

Sequence


RefSeq Acc Id: ENSRNOT00000038279   ⟹   ENSRNOP00000031739
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1144,437,145 - 144,451,435 (-)Ensembl
Rnor_6.0 Ensembl1156,262,031 - 156,275,002 (+)Ensembl
RefSeq Acc Id: NM_001106280   ⟹   NP_001099750
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,852,081 - 153,863,969 (-)NCBI
mRatBN7.21144,439,551 - 144,451,439 (-)NCBI
Rnor_6.01156,262,220 - 156,274,207 (+)NCBI
Rnor_5.01162,508,342 - 162,520,329 (+)NCBI
RGSC_v3.41147,146,180 - 147,158,120 (-)RGD
Celera1142,659,948 - 142,671,836 (-)RGD
Sequence:
RefSeq Acc Id: XM_039105901   ⟹   XP_038961829
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,852,081 - 153,860,686 (-)NCBI
mRatBN7.21144,437,142 - 144,451,446 (-)NCBI
RefSeq Acc Id: XR_005501989
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,852,374 - 153,864,038 (-)NCBI
mRatBN7.21144,437,142 - 144,451,508 (-)NCBI
RefSeq Acc Id: NP_001099750   ⟸   NM_001106280
- UniProtKB: G3V8Z8 (UniProtKB/Swiss-Prot),   B2RZD2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSRNOP00000031739   ⟸   ENSRNOT00000038279
RefSeq Acc Id: XP_038961829   ⟸   XM_039105901
- Peptide Label: isoform X1
- UniProtKB: A6I646 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B2RZD2-F1-model_v2 AlphaFold B2RZD2 1-229 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13690189
Promoter ID:EPDNEW_R714
Type:multiple initiation site
Name:Tmem126b_1
Description:transmembrane protein 126B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01156,262,211 - 156,262,271EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308371 AgrOrtholog
BioCyc Gene G2FUF-58526 BioCyc
Ensembl Genes ENSRNOG00000022732 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00055019532 UniProtKB/Swiss-Prot
  ENSRNOG00065029197 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000038279 ENTREZGENE
  ENSRNOT00000038279.7 UniProtKB/Swiss-Prot
  ENSRNOT00055033333 UniProtKB/Swiss-Prot
  ENSRNOT00065050418 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:6921139 IMAGE-MGC_LOAD
InterPro TMEM126 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:293114 UniProtKB/Swiss-Prot
MGC_CLONE MGC:189574 IMAGE-MGC_LOAD
NCBI Gene 293114 ENTREZGENE
PANTHER COMPLEX I ASSEMBLY FACTOR TMEM126B, MITOCHONDRIAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR16296 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam TMEM126 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tmem126b PhenoGen
RatGTEx ENSRNOG00000022732 RatGTEx
  ENSRNOG00055019532 RatGTEx
  ENSRNOG00065029197 RatGTEx
UniProt A6I646 ENTREZGENE, UniProtKB/TrEMBL
  B2RZD2 ENTREZGENE
  G3V8Z8 ENTREZGENE
  T126B_RAT UniProtKB/Swiss-Prot
UniProt Secondary G3V8Z8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-02-26 Tmem126b  transmembrane protein 126B  RGD1308371_predicted  hypothetical LOC293114 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 RGD1308371_predicted  hypothetical LOC293114 (predicted)  LOC293114_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC293114_predicted  hypothetical LOC293114 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL