Plek (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 14 | 95,598,650 - 95,631,326 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 91,397,015 - 91,429,693 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 91,397,019 - 91,454,131 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 95,711,348 - 95,744,200 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 96,955,673 - 96,988,529 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 93,420,742 - 93,453,592 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 100,151,518 - 100,184,192 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 100,151,210 - 100,217,913 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 100,353,685 - 100,386,531 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 97,841,595 - 97,875,052 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 14 | 97,860,739 - 97,894,197 (-) | NCBI | | | | | Celera | 14 | 90,445,003 - 90,477,678 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | q22 | NCBI | | | | |
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PLEK (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 2 | 68,365,282 - 68,397,453 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 68,365,282 - 68,397,453 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 68,592,414 - 68,624,585 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 68,445,826 - 68,478,089 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 68,504,074 - 68,536,233 | NCBI | | | | | Celera | 2 | 68,441,906 - 68,474,166 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | p14 | NCBI | | | | | HuRef | 2 | 68,329,667 - 68,361,928 (+) | NCBI | | HuRef | | | CHM1_1 | 2 | 68,523,094 - 68,555,363 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 68,375,241 - 68,408,023 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Plek (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 16,921,206 - 16,958,718 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 16,921,206 - 17,002,381 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 16,971,206 - 17,008,718 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 16,971,206 - 17,052,381 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 16,871,209 - 16,908,721 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 16,871,451 - 16,908,705 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 17,344,383 - 17,382,015 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | A2 | NCBI | | | | | cM Map | 11 | 9.41 | NCBI | | | | |
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Plek (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955424 | 16,493,960 - 16,524,998 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955424 | 16,494,052 - 16,524,790 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PLEK (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 12 | 58,010,086 - 58,042,467 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2A | 58,014,034 - 58,046,403 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2A | 68,414,281 - 68,446,647 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2A | 69,537,983 - 69,570,393 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2A | 69,537,983 - 69,570,393 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PLEK (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 10 | 67,395,972 - 67,421,247 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 10 | 67,395,972 - 67,421,247 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 10 | 67,285,901 - 67,311,154 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 10 | 68,415,503 - 68,440,783 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 10 | 68,415,508 - 68,440,783 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 10 | 68,098,493 - 68,123,539 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 10 | 68,396,757 - 68,422,024 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 10 | 68,691,992 - 68,717,126 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Plek (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024406292 | 15,753,019 - 15,814,303 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936491 | 12,762,328 - 12,818,306 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936491 | 12,762,421 - 12,818,249 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PLEK (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 3 | 73,877,743 - 73,906,667 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 73,877,741 - 73,910,163 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 77,408,772 - 77,437,488 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PLEK (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 14 | 38,689,387 - 38,769,090 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 14 | 38,689,393 - 38,745,893 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666045 | 73,220,871 - 73,287,225 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Plek (Heterocephalus glaber - naked mole-rat) |
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