Zfp207 (zinc finger protein 207) - Rat Genome Database

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Gene: Zfp207 (zinc finger protein 207) Rattus norvegicus
Analyze
Symbol: Zfp207
Name: zinc finger protein 207
RGD ID: 1308121
Description: Predicted to enable heparin binding activity and microtubule binding activity. Predicted to be involved in mitotic spindle assembly checkpoint signaling; nuclear chromosome segregation; and protein stabilization. Predicted to be located in nucleolus and nucleoplasm. Predicted to be active in kinetochore; nucleus; and spindle matrix. Orthologous to human ZNF207 (zinc finger protein 207); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; aconitine; bisphenol A.
Type: protein-coding (Ensembl: pseudogene)
RefSeq Status: VALIDATED
Previously known as: BUB3-interacting and GLEBS motif-containing protein ZNF207; LOC303763; MGC116398
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21065,385,823 - 65,397,591 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1065,385,740 - 65,397,386 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1070,014,000 - 70,026,284 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01069,519,314 - 69,531,597 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01064,981,350 - 64,993,770 (+)NCBIRnor_WKY
Rnor_6.01067,762,970 - 67,784,854 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1067,762,995 - 67,774,787 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01067,418,642 - 67,440,272 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41068,613,434 - 68,625,197 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11068,627,027 - 68,639,308 (+)NCBI
Celera1064,344,553 - 64,356,322 (+)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1,2-dimethylhydrazine  (ISO)
1,4-dichlorobenzene  (ISO)
17alpha-ethynylestradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-methylcholine  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
aconitine  (EXP)
aristolochic acid A  (ISO)
Aroclor 1254  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bilirubin IXalpha  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
calyculin a  (ISO)
cannabidiol  (ISO)
carbon nanotube  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
cocaine  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
crocidolite asbestos  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
ethanol  (ISO)
flutamide  (EXP)
folic acid  (ISO)
formaldehyde  (ISO)
fulvestrant  (ISO)
geldanamycin  (ISO)
gentamycin  (EXP)
geraniol  (ISO)
irinotecan  (ISO)
isoprenaline  (ISO)
ivermectin  (ISO)
leflunomide  (ISO)
lithium chloride  (ISO)
mercury dibromide  (ISO)
methylmercury chloride  (ISO)
methylparaben  (ISO)
miconazole  (ISO)
paracetamol  (EXP,ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pinosylvin  (ISO)
pirinixic acid  (ISO)
piroxicam  (ISO)
potassium dichromate  (ISO)
propiconazole  (ISO)
resveratrol  (EXP)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
succimer  (ISO)
tamoxifen  (ISO)
tetrachloromethane  (ISO)
thapsigargin  (ISO)
thioacetamide  (EXP)
trans-pinosylvin  (ISO)
Tributyltin oxide  (ISO)
trichloroethene  (EXP)
trimellitic anhydride  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vincristine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9832628   PMID:10716735   PMID:12477932   PMID:22681889   PMID:24462186   PMID:24462187   PMID:26388440  


Genomics

Comparative Map Data
Zfp207
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21065,385,823 - 65,397,591 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1065,385,740 - 65,397,386 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1070,014,000 - 70,026,284 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01069,519,314 - 69,531,597 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01064,981,350 - 64,993,770 (+)NCBIRnor_WKY
Rnor_6.01067,762,970 - 67,784,854 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1067,762,995 - 67,774,787 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01067,418,642 - 67,440,272 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41068,613,434 - 68,625,197 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11068,627,027 - 68,639,308 (+)NCBI
Celera1064,344,553 - 64,356,322 (+)NCBICelera
Cytogenetic Map10q26NCBI
ZNF207
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381732,350,157 - 32,381,885 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1732,350,132 - 32,381,885 (+)EnsemblGRCh38hg38GRCh38
GRCh371730,677,176 - 30,708,904 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361727,701,270 - 27,721,581 (+)NCBINCBI36Build 36hg18NCBI36
Build 341727,701,297 - 27,721,581NCBI
Celera1727,587,373 - 27,607,677 (+)NCBICelera
Cytogenetic Map17q11.2NCBI
HuRef1726,863,931 - 26,884,226 (+)NCBIHuRef
CHM1_11730,739,649 - 30,759,964 (+)NCBICHM1_1
T2T-CHM13v2.01733,295,928 - 33,327,660 (+)NCBIT2T-CHM13v2.0
Zfp207
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391180,274,105 - 80,299,387 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1180,274,105 - 80,296,559 (+)EnsemblGRCm39 Ensembl
GRCm381180,383,279 - 80,408,561 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1180,383,279 - 80,405,733 (+)EnsemblGRCm38mm10GRCm38
MGSCv371180,196,781 - 80,209,750 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361180,199,541 - 80,212,332 (+)NCBIMGSCv36mm8
Celera1190,020,650 - 90,033,619 (+)NCBICelera
Cytogenetic Map11B5NCBI
Znf207
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554817,307,521 - 7,328,198 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554817,307,520 - 7,325,591 (+)NCBIChiLan1.0ChiLan1.0
ZNF207
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11724,693,863 - 24,714,296 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1724,690,903 - 24,714,628 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01724,405,632 - 24,425,868 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
LOC100687713
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1111,027,387 - 1,029,505 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha111,087,602 - 1,089,241 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.011996,594 - 998,233 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.111949,719 - 951,358 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0111,047,711 - 1,049,353 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0111,287,677 - 1,289,319 (+)NCBIUU_Cfam_GSD_1.0
Znf207
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560239,645,891 - 39,663,264 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365382,523,839 - 2,541,183 (-)EnsemblSpeTri2.0
SpeTri2.0NW_0049365382,514,772 - 2,541,198 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF207
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1242,576,532 - 42,612,396 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11242,576,534 - 42,602,789 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21244,344,356 - 44,362,595 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF207
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11625,918,182 - 25,948,477 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1625,918,165 - 25,941,560 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660754,095,608 - 4,127,734 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf207
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624875434,087 - 453,932 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624875434,770 - 463,977 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Zfp207
59 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:13
Count of miRNA genes:13
Interacting mature miRNAs:13
Transcripts:ENSRNOT00000000253
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)14232313287323132Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)14232313287323132Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)14232313287323132Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)14232313287323132Rat
70198BpQTLcluster9Blood pressure QTL cluster 92.94arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)104232313287323132Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
70363Bp71Blood pressure QTL 710.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)106134527681714865Rat
70364Bp72Blood pressure QTL 72arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)105112110096121100Rat
2303118Mamtr7Mammary tumor resistance QTL 70.003mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)109658275104670812Rat
631267Cia20Collagen induced arthritis QTL 203.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
631268Cia21Collagen induced arthritis QTL 213.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1014487011104060283Rat
61449Ciaa2CIA Autoantibody QTL 27.1blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)1063221094107211142Rat
61463Bp12Blood pressure QTL 126.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104133325886333258Rat
70164Bw21Body weight QTL 214.360.00005body mass (VT:0001259)body weight (CMO:0000012)105379749498952626Rat
70171Cari1Carrageenan-induced inflammation QTL 14.90.0005hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)1053797385107211142Rat
61325Aia5Adjuvant induced arthritis QTL 50.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
724527Bp148Blood pressure QTL 1480.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102845313673453136Rat
724556Pur2Proteinuria QTL 25.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)102242750090627625Rat
1298069Bp168Blood pressure QTL 1685.5blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)102652195798003205Rat
1298078Stresp5Stress response QTL 52.990.00025blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1042045676104670812Rat
631557Bp136Blood pressure QTL 1360.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)103063205375632053Rat
1331791Cm31Cardiac mass QTL 313.84606heart mass (VT:0007028)heart wet weight (CMO:0000069)1029299504107211142Rat
1331839Eae18bExperimental allergic encephalomyelitis QTL 18b5.80.03nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)106124830367785171Rat
2312662Slep8Serum leptin concentration QTL 80.05blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1057134272102134272Rat
2312668Scl65Serum cholesterol level QTL 650.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1057134272102134272Rat
2312672Insul15Insulin level QTL 150.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1057134272102134272Rat
2306970Anxrr22Anxiety related response QTL 225.95fear/anxiety-related behavior trait (VT:1000241)number of periods of voluntary immobility (CMO:0001045)106134527698211570Rat
631269Cia22Collagen induced arthritis QTL 228.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040035094104060283Rat
631270Cia23Collagen induced arthritis QTL 233.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040035094104060283Rat
631526Bp76Blood pressure QTL 760.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)106134541366743655Rat
631530Tls3T-lymphoma susceptibility QTL 300.0001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)105177461295600334Rat
631535Cm51Cardiac mass QTL 513heart mass (VT:0007028)calculated heart weight (CMO:0000073)105178628291669536Rat
631542Bp82Blood pressure QTL 826.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)102652195798952741Rat
631547Bp87Blood pressure QTL 874.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104736947092369470Rat
631552Vetf2Vascular elastic tissue fragility QTL 24.50.0002aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)104114263386142633Rat
2300171Bmd58Bone mineral density QTL 584.90.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)102694462871944628Rat
2293652Bmd22Bone mineral density QTL 224.90.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)104944455181709989Rat
2293669Bmd33Bone mineral density QTL 334.50.0001femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)104944455181709989Rat
2293679Bmd30Bone mineral density QTL 303.50.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)104944455181709989Rat
2293698Bss43Bone structure and strength QTL 435.330.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1059209888104209888Rat
1576308Schws1Schwannoma susceptibility QTL 10.0041nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)1040035094102359817Rat
1576311Pia26Pristane induced arthritis QTL 26joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)103122402675632053Rat
1576319Cia29Collagen induced arthritis QTL 29joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)103397392178973921Rat
1578779Tcas10Tongue tumor susceptibility QTL 103.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)103129743976297439Rat
1354608Cm33Cardiac mass QTL 332.8heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)105480929299809292Rat
2293705Bmd25Bone mineral density QTL 257.10.0001femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)104944455181709989Rat
2300218Hpcl2Hepatic cholesterol level QTL 2liver cholesterol amount (VT:0010498)liver cholesterol level (CMO:0001597)104502965095600334Rat
2301967Cm73Cardiac mass QTL 734.55heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)101448701189062041Rat
1359017Hrtrt21Heart rate QTL 212.4heart pumping trait (VT:2000009)heart rate (CMO:0000002)105177294096772940Rat
1558643Cm44Cardiac mass QTL 444.80.0000368heart mass (VT:0007028)heart wet weight (CMO:0000069)106134527699703528Rat
2316949Gluco60Glucose level QTL 603.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1014487011107057807Rat
2317042Aia20Adjuvant induced arthritis QTL 203.38joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)103756507982565079Rat
2317043Aia7Adjuvant induced arthritis QTL 73.82joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)103756507982565079Rat
1549846Scl47Serum cholesterol level QTL 473.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)105057470795574707Rat
1554317Bmd4Bone mineral density QTL 49.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)101981604299406971Rat
2292441Bp308Blood pressure QTL 308arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102760646872606468Rat
2313103Bss80Bone structure and strength QTL 8020.0001tibia strength trait (VT:1000284)tibia midshaft endosteal cross-sectional area (CMO:0001716)1062057807107057807Rat
2313105Bss79Bone structure and strength QTL 791.80.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)1062057807107057807Rat
2306787Ean3Experimental allergic neuritis QTL 33.1nervous system integrity trait (VT:0010566)body weight loss (CMO:0001399)105379738566979128Rat
1549831Bss6Bone structure and strength QTL 64lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)1057576521102576521Rat
61354Pia10Pristane induced arthritis QTL 100.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
61387Bp1Blood pressure QTL 15.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1051770177107211142Rat
61387Bp1Blood pressure QTL 15.1arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1051770177107211142Rat
61402Niddm3Non-insulin dependent diabetes mellitus QTL 34.58blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)106134541382564856Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10635789696121100Rat
6893336Cm75Cardiac mass QTL 750.10.87heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)106134527699703528Rat
6893342Cm78Cardiac mass QTL 780.10.88heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)104287676679813922Rat
7207811Bmd90Bone mineral density QTL 905.2femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)104944455181709989Rat
9589030Epfw9Epididymal fat weight QTL 919.240.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)104444169989441699Rat
7411614Foco18Food consumption QTL 180.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)104444169989441699Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10615418273453136Rat
8552805Bw145Body weight QTL 1452.2body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)104194452678307017Rat
8694173Bw149Body weight QTL 1494.380.001body mass (VT:0001259)body weight gain (CMO:0000420)104444169989441699Rat
10402859Bp381Blood pressure QTL 3810.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102760646872606468Rat

Markers in Region
AW535144  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21065,385,089 - 65,385,303 (+)MAPPERmRatBN7.2
Rnor_6.01067,762,298 - 67,762,511NCBIRnor6.0
Rnor_5.01067,417,970 - 67,418,183UniSTSRnor5.0
RGSC_v3.41068,612,701 - 68,612,914UniSTSRGSC3.4
Celera1064,343,820 - 64,344,033UniSTS
Cytogenetic Map10q26UniSTS
BF390612  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21065,395,985 - 65,396,170 (+)MAPPERmRatBN7.2
Rnor_6.01067,773,189 - 67,773,373NCBIRnor6.0
Rnor_5.01067,428,861 - 67,429,045UniSTSRnor5.0
RGSC_v3.41068,623,593 - 68,623,777UniSTSRGSC3.4
Celera1064,354,718 - 64,354,902UniSTS
Cytogenetic Map10q26UniSTS
MARC_17513-17514:1016473117:1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21065,393,817 - 65,395,248 (+)MAPPERmRatBN7.2
Rnor_6.01067,771,021 - 67,772,451NCBIRnor6.0
Rnor_5.01067,426,693 - 67,428,123UniSTSRnor5.0
RGSC_v3.41068,621,425 - 68,622,855UniSTSRGSC3.4
Celera1064,352,550 - 64,353,980UniSTS
Cytogenetic Map10q26UniSTS
ZNF207-1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2994,758,697 - 94,758,840 (+)MAPPERmRatBN7.2
mRatBN7.21065,396,358 - 65,397,079 (+)MAPPERmRatBN7.2
Rnor_6.01067,773,562 - 67,774,280NCBIRnor6.0
Rnor_6.09101,674,450 - 101,674,592NCBIRnor6.0
Rnor_5.01067,429,234 - 67,429,952UniSTSRnor5.0
Rnor_5.09101,300,820 - 101,300,962UniSTSRnor5.0
RGSC_v3.4993,540,973 - 93,541,115UniSTSRGSC3.4
RGSC_v3.41068,623,966 - 68,624,684UniSTSRGSC3.4
Celera1064,355,091 - 64,355,809UniSTS
Celera992,277,139 - 92,277,281UniSTS
Cytogenetic Map9q36UniSTS
Cytogenetic Map10q26UniSTS
D17S1500E  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21065,396,221 - 65,396,985 (+)MAPPERmRatBN7.2
Rnor_6.01067,773,425 - 67,774,188NCBIRnor6.0
Rnor_5.01067,429,097 - 67,429,860UniSTSRnor5.0
RGSC_v3.41068,623,829 - 68,624,592UniSTSRGSC3.4
Celera1064,354,954 - 64,355,717UniSTS
Cytogenetic Map10q26UniSTS
D17S1516E  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2994,759,004 - 94,759,158 (+)MAPPERmRatBN7.2
Rnor_6.09101,674,757 - 101,674,910NCBIRnor6.0
Rnor_6.01067,774,548 - 67,774,715NCBIRnor6.0
Rnor_5.01067,430,220 - 67,430,387UniSTSRnor5.0
Rnor_5.09101,301,127 - 101,301,280UniSTSRnor5.0
RGSC_v3.4993,541,280 - 93,541,433UniSTSRGSC3.4
RGSC_v3.41068,624,952 - 68,625,119UniSTSRGSC3.4
Celera1064,356,077 - 64,356,244UniSTS
Celera992,277,446 - 92,277,599UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map9q36UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 74 35 41 11 8
Low
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000000253   ⟹   ENSRNOP00000000253
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1065,385,740 - 65,397,386 (+)Ensembl
Rnor_6.0 Ensembl1067,762,995 - 67,774,787 (+)Ensembl
RefSeq Acc Id: NM_001039020   ⟹   NP_001034109
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21065,385,823 - 65,397,591 (+)NCBI
Rnor_6.01067,763,031 - 67,774,793 (+)NCBI
Rnor_5.01067,418,642 - 67,440,272 (+)NCBI
RGSC_v3.41068,613,434 - 68,625,197 (+)RGD
Celera1064,344,553 - 64,356,322 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001034109 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380696 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI00270 (Get FASTA)   NCBI Sequence Viewer  
  EDM05418 (Get FASTA)   NCBI Sequence Viewer  
  EDM05419 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001034109   ⟸   NM_001039020
- UniProtKB: Q498C9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000000253   ⟸   ENSRNOT00000000253
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q498C9-F1-model_v2 AlphaFold Q498C9 1-464 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13697503
Promoter ID:EPDNEW_R8028
Type:multiple initiation site
Name:Zfp207_1
Description:zinc finger protein 207
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01067,763,015 - 67,763,075EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308121 AgrOrtholog
BioCyc Gene G2FUF-23973 BioCyc
Ensembl Genes ENSRNOG00000000236 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000000253 ENTREZGENE
IMAGE_CLONE IMAGE:7387460 IMAGE-MGC_LOAD
InterPro Znf_C2H2_type UniProtKB/TrEMBL
KEGG Report rno:303763 UniProtKB/TrEMBL
MGC_CLONE MGC:116398 IMAGE-MGC_LOAD
NCBI Gene 303763 ENTREZGENE
PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 207 UniProtKB/TrEMBL
PhenoGen Zfp207 PhenoGen
PRINTS PRICHEXTENSN UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
UniProt Q498C9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Zfp207  zinc finger protein 207  Zfp207_predicted  zinc finger protein 207 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Zfp207_predicted  zinc finger protein 207 (predicted)      Symbol and Name status set to approved 70820 APPROVED