Zfp131 (zinc finger protein 131) - Rat Genome Database

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Gene: Zfp131 (zinc finger protein 131) Rattus norvegicus
Analyze
Symbol: Zfp131
Name: zinc finger protein 131
RGD ID: 1307638
Description: Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; DNA-binding transcription repressor activity, RNA polymerase II-specific; and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in intermediate filament cytoskeleton. Predicted to be active in nucleoplasm. Orthologous to human ZNF131 (zinc finger protein 131); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC310375
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2251,722,774 - 51,753,662 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl251,725,541 - 51,753,639 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx258,842,881 - 58,869,784 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0256,901,608 - 56,928,508 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0251,835,564 - 51,862,476 (-)NCBIRnor_WKY
Rnor_6.0252,503,185 - 52,532,097 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl252,504,315 - 52,531,085 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0270,867,488 - 70,895,803 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4251,817,650 - 51,844,634 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1251,745,367 - 51,773,433 (-)NCBI
Celera247,380,536 - 47,407,328 (-)NCBICelera
Cytogenetic Map2q15-q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:20303951  


Genomics

Comparative Map Data
Zfp131
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2251,722,774 - 51,753,662 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl251,725,541 - 51,753,639 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx258,842,881 - 58,869,784 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0256,901,608 - 56,928,508 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0251,835,564 - 51,862,476 (-)NCBIRnor_WKY
Rnor_6.0252,503,185 - 52,532,097 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl252,504,315 - 52,531,085 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0270,867,488 - 70,895,803 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4251,817,650 - 51,844,634 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1251,745,367 - 51,773,433 (-)NCBI
Celera247,380,536 - 47,407,328 (-)NCBICelera
Cytogenetic Map2q15-q16NCBI
ZNF131
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38543,120,914 - 43,176,324 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl543,065,176 - 43,192,021 (+)EnsemblGRCh38hg38GRCh38
GRCh37543,121,016 - 43,176,426 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36543,157,399 - 43,211,593 (+)NCBINCBI36Build 36hg18NCBI36
Celera543,012,883 - 43,067,075 (+)NCBICelera
Cytogenetic Map5p12NCBI
HuRef543,072,199 - 43,126,538 (+)NCBIHuRef
CHM1_1543,122,676 - 43,176,938 (+)NCBICHM1_1
T2T-CHM13v2.0543,373,818 - 43,429,219 (+)NCBIT2T-CHM13v2.0
Zfp131
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913120,226,722 - 120,253,070 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13120,226,723 - 120,252,425 (-)EnsemblGRCm39 Ensembl
GRCm3813119,765,186 - 119,791,477 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13119,765,187 - 119,790,889 (-)EnsemblGRCm38mm10GRCm38
Celera13124,146,114 - 124,171,617 (-)NCBICelera
Cytogenetic Map13D2.3NCBI
Znf131
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544619,065,927 - 19,106,456 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544619,066,902 - 19,106,458 (-)NCBIChiLan1.0ChiLan1.0
ZNF131
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1572,251,391 - 72,305,812 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl572,251,391 - 72,305,772 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0567,205,632 - 67,258,461 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
ZNF131
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1466,738,301 - 66,769,015 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl466,739,148 - 66,769,075 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha466,499,412 - 66,530,539 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0467,230,060 - 67,261,190 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl467,230,140 - 67,260,562 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1466,990,565 - 67,021,905 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0467,119,736 - 67,150,860 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0467,656,051 - 67,687,181 (-)NCBIUU_Cfam_GSD_1.0
Znf131
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213210,018,310 - 210,048,120 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648018,954,803 - 18,984,552 (-)EnsemblSpeTri2.0
SpeTri2.0NW_00493648018,954,805 - 18,984,606 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF131
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1627,813,997 - 27,846,942 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11627,813,974 - 27,846,872 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21629,348,274 - 29,357,099 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103215214
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1441,907,302 - 41,961,896 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl441,908,115 - 41,962,352 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607132,358,404 - 32,415,433 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf131
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475911,935,812 - 11,979,116 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Zfp131
91 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:435
Count of miRNA genes:244
Interacting mature miRNAs:293
Transcripts:ENSRNOT00000021608
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
738012Anxrr3Anxiety related response QTL 33.8exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)2902351954023519Rat
9590095Sffal3Serum free fatty acids level QTL 36.780.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)22715716072157160Rat
1300160Hrtrt3Heart rate QTL 33.62heart pumping trait (VT:2000009)absolute change in heart rate (CMO:0000534)22997159351729300Rat
10402051Gdil2Gastrointestinal dilation QTL 2enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)22490385374786777Rat
1300155Bp174Blood pressure QTL 1744.09arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)24280460760653831Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)225413423143657569Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243171017184114403Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226917817127469484Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)22691781781754745Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22691781781754745Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22691781781754745Rat
1357990Ael1Aortic elastin QTL 13.10.00091aorta elastin amount (VT:0003905)aortic elastin21907682564076825Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23513484188029593Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226917817136917119Rat
631208Bw1Body weight QTL15.09mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)24317101783575226Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246123260202447032Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243154682202446871Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607157142209Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607182042367Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243162366148478373Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)25873687102844969Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23502311780023117Rat
12879863Bp402Blood pressure QTL 4020.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24112578956532139Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243162366111362592Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23064806575648065Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)243162366111362592Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21649174061491740Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)240067944102785628Rat
2300168Bmd47Bone mineral density QTL 476.60.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)22066244865662448Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22030467265304672Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21159110056591100Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat

Markers in Region
D2Rat202  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2251,729,139 - 51,729,300 (+)MAPPERmRatBN7.2
Rnor_6.0252,507,645 - 52,507,805NCBIRnor6.0
Rnor_5.0270,871,440 - 70,871,600UniSTSRnor5.0
RGSC_v3.4251,821,000 - 51,821,161RGDRGSC3.4
RGSC_v3.4251,821,001 - 51,821,161UniSTSRGSC3.4
RGSC_v3.1251,749,233 - 51,749,394RGD
Celera247,383,887 - 47,384,047UniSTS
SHRSP x BN Map222.9498RGD
SHRSP x BN Map222.9498UniSTS
Cytogenetic Map2q16UniSTS
BF387209  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2251,729,351 - 51,729,502 (+)MAPPERmRatBN7.2
Rnor_6.0252,507,857 - 52,508,007NCBIRnor6.0
Rnor_5.0270,871,652 - 70,871,802UniSTSRnor5.0
RGSC_v3.4251,821,213 - 51,821,363UniSTSRGSC3.4
Celera247,384,099 - 47,384,249UniSTS
RH 3.4 Map2330.5UniSTS
Cytogenetic Map2q16UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 37 44 28 19 28 8 9 74 35 41 11 8
Low 6 13 13 13 2
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001100698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006231960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006231961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006231962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006231963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006231965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008760772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039102252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039102253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC098842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC161974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ225691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JACYVU010000065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000021608   ⟹   ENSRNOP00000021608
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl251,725,541 - 51,753,091 (-)Ensembl
Rnor_6.0 Ensembl252,504,315 - 52,531,085 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000089303   ⟹   ENSRNOP00000070103
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl251,725,541 - 51,753,091 (-)Ensembl
Rnor_6.0 Ensembl252,504,665 - 52,531,083 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000104695   ⟹   ENSRNOP00000089583
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl251,725,831 - 51,753,017 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000107342   ⟹   ENSRNOP00000086042
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl251,735,710 - 51,753,639 (-)Ensembl
RefSeq Acc Id: NM_001100698   ⟹   NP_001094168
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2251,725,789 - 51,752,584 (-)NCBI
Rnor_6.0252,504,294 - 52,531,085 (-)NCBI
Rnor_5.0270,867,488 - 70,895,803 (-)NCBI
RGSC_v3.4251,817,650 - 51,844,634 (-)RGD
Celera247,380,536 - 47,407,328 (-)RGD
Sequence:
RefSeq Acc Id: XM_006231960   ⟹   XP_006232022
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2251,725,191 - 51,753,646 (-)NCBI
Rnor_6.0252,503,693 - 52,532,097 (-)NCBI
Rnor_5.0270,867,488 - 70,895,803 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006231961   ⟹   XP_006232023
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2251,725,191 - 51,752,930 (-)NCBI
Rnor_6.0252,503,185 - 52,531,522 (-)NCBI
Rnor_5.0270,867,488 - 70,895,803 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006231962   ⟹   XP_006232024
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2251,722,774 - 51,753,416 (-)NCBI
Rnor_6.0252,503,185 - 52,531,681 (-)NCBI
Rnor_5.0270,867,488 - 70,895,803 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006231963   ⟹   XP_006232025
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2251,722,774 - 51,753,416 (-)NCBI
Rnor_6.0252,503,185 - 52,531,686 (-)NCBI
Rnor_5.0270,867,488 - 70,895,803 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006231965   ⟹   XP_006232027
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2251,725,191 - 51,752,620 (-)NCBI
Rnor_6.0252,503,185 - 52,531,241 (-)NCBI
Rnor_5.0270,867,488 - 70,895,803 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008760772   ⟹   XP_008758994
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2251,725,191 - 51,752,620 (-)NCBI
Rnor_6.0252,503,693 - 52,531,521 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039102252   ⟹   XP_038958180
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2251,725,191 - 51,753,662 (-)NCBI
RefSeq Acc Id: XM_039102253   ⟹   XP_038958181
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2251,722,774 - 51,736,400 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_001094168   ⟸   NM_001100698
- UniProtKB: B1WC22 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006232022   ⟸   XM_006231960
- Peptide Label: isoform X1
- UniProtKB: B1WC22 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006232025   ⟸   XM_006231963
- Peptide Label: isoform X1
- UniProtKB: B1WC22 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006232024   ⟸   XM_006231962
- Peptide Label: isoform X1
- UniProtKB: B1WC22 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006232023   ⟸   XM_006231961
- Peptide Label: isoform X1
- UniProtKB: B1WC22 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006232027   ⟸   XM_006231965
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_008758994   ⟸   XM_008760772
- Peptide Label: isoform X2
- UniProtKB: A0A0G2JX21 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000021608   ⟸   ENSRNOT00000021608
RefSeq Acc Id: ENSRNOP00000070103   ⟸   ENSRNOT00000089303
RefSeq Acc Id: XP_038958181   ⟸   XM_039102253
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038958180   ⟸   XM_039102252
- Peptide Label: isoform X4
RefSeq Acc Id: ENSRNOP00000086042   ⟸   ENSRNOT00000107342
RefSeq Acc Id: ENSRNOP00000089583   ⟸   ENSRNOT00000104695
Protein Domains
BTB   C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B1WC22-F1-model_v2 AlphaFold B1WC22 1-619 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13691159
Promoter ID:EPDNEW_R1684
Type:single initiation site
Name:Zfp131_1
Description:zinc finger protein 131
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0252,531,096 - 52,531,156EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307638 AgrOrtholog
BioCyc Gene G2FUF-54272 BioCyc
Ensembl Genes ENSRNOG00000015925 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000021608 ENTREZGENE
  ENSRNOP00000021608.4 UniProtKB/TrEMBL
  ENSRNOP00000070103 ENTREZGENE
  ENSRNOP00000070103.1 UniProtKB/TrEMBL
  ENSRNOP00000086042.1 UniProtKB/TrEMBL
  ENSRNOP00000089583.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000021608 ENTREZGENE
  ENSRNOT00000021608.7 UniProtKB/TrEMBL
  ENSRNOT00000089303 ENTREZGENE
  ENSRNOT00000089303.2 UniProtKB/TrEMBL
  ENSRNOT00000104695.1 UniProtKB/TrEMBL
  ENSRNOT00000107342.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.710.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7379163 IMAGE-MGC_LOAD
  IMAGE:9029363 IMAGE-MGC_LOAD
InterPro BTB/POZ-like UniProtKB/TrEMBL
  BTB/POZ_fold UniProtKB/TrEMBL
  Zfp131 UniProtKB/TrEMBL
  Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
KEGG Report rno:310375 UniProtKB/TrEMBL
MGC_CLONE MGC:112898 IMAGE-MGC_LOAD
  MGC:187784 IMAGE-MGC_LOAD
NCBI Gene 310375 ENTREZGENE
PANTHER PTHR24399:SF35 UniProtKB/TrEMBL
  PTHR24403:SF55 UniProtKB/TrEMBL
Pfam BTB UniProtKB/TrEMBL
PhenoGen Zfp131 PhenoGen
PROSITE BTB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART BTB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP BTB/POZ_fold UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A0G2JX21 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A0G9_RAT UniProtKB/TrEMBL
  A0A8I6AC93_RAT UniProtKB/TrEMBL
  B1WC22 ENTREZGENE, UniProtKB/TrEMBL
  Q4G013_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Zfp131  zinc finger protein 131  Zfp131_predicted  zinc finger protein 131 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Zfp131_predicted  zinc finger protein 131 (predicted)      Symbol and Name status set to approved 70820 APPROVED