Zfp131 (zinc finger protein 131) - Rat Genome Database

Name: Zfp131
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes Community Projects (beta) QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

Gene: Zfp131 (zinc finger protein 131) Rattus norvegicus

Analyze

Symbol:

Zfp131

Name:

zinc finger protein 131

RGD ID:

1307638

Description:

Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in intermediate filament cytoskeleton and nucleoplasm. Orthologous to human ZNF131 (zinc finger protein 131); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC310375

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZNF131 (zinc finger protein 131)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Zfp131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Znf131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZNF131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZNF131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Znf131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZNF131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LOC103215214 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Znf131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Zfp131 (zinc finger protein 131)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ZNF131 (zinc finger protein 131)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	znf131 (zinc finger protein 131)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	2	51,722,774 - 51,753,662 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	51,725,541 - 51,753,639 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	58,842,881 - 58,869,784 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	56,901,608 - 56,928,508 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	51,835,564 - 51,862,476 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	52,503,185 - 52,532,097 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	52,504,315 - 52,531,085 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	51,817,650 - 51,844,634 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	51,745,367 - 51,773,433 (-)	NCBI
Celera	2	47,380,536 - 47,407,328 (-)	NCBI		Celera
Cytogenetic Map	2	q15-q16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

3,4-methylenedioxymethamphetamine (ISO)

all-trans-retinoic acid (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (EXP,ISO)

copper atom (EXP)

copper(0) (EXP)

cyclosporin A (ISO)

deguelin (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

entinostat (ISO)

fenthion (ISO)

folic acid (ISO)

formaldehyde (ISO)

hydrogen peroxide (ISO)

maneb (ISO)

methylmercury chloride (ISO)

paracetamol (EXP,ISO)

paraquat (ISO)

phenethyl isothiocyanate (EXP)

phenytoin (EXP)

resveratrol (ISO)

selenium atom (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

Soman (EXP)

tetrachloromethane (ISO)

thioacetamide (EXP)

urethane (ISO)

valproic acid (ISO)

vitamin E (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of transcription by RNA polymerase II (IBA)

positive regulation of transcription by RNA polymerase II (ISO)

regulation of cytokine production (IBA)

regulation of immune system process (IBA)

Cellular Component

intermediate filament cytoskeleton (ISO)

nucleoplasm (IBA,ISO)

Molecular Function

DNA-binding transcription activator activity, RNA polymerase II-specific (ISO)

DNA-binding transcription repressor activity, RNA polymerase II-specific (IBA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA)

sequence-specific DNA binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:20303951

Genomics

Comparative Map Data

Zfp131
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	2	51,722,774 - 51,753,662 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	51,725,541 - 51,753,639 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	58,842,881 - 58,869,784 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	56,901,608 - 56,928,508 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	51,835,564 - 51,862,476 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	52,503,185 - 52,532,097 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	52,504,315 - 52,531,085 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	51,817,650 - 51,844,634 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	51,745,367 - 51,773,433 (-)	NCBI
Celera	2	47,380,536 - 47,407,328 (-)	NCBI		Celera
Cytogenetic Map	2	q15-q16	NCBI

ZNF131
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	43,120,914 - 43,176,324 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	43,065,176 - 43,192,021 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	43,121,016 - 43,176,426 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	43,157,399 - 43,211,593 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	5	43,012,883 - 43,067,075 (+)	NCBI		Celera
Cytogenetic Map	5	p12	NCBI
HuRef	5	43,072,199 - 43,126,538 (+)	NCBI		HuRef
CHM1_1	5	43,122,676 - 43,176,938 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	43,373,818 - 43,429,219 (+)	NCBI		T2T-CHM13v2.0

Zfp131
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	120,226,722 - 120,253,070 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	120,226,723 - 120,252,425 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	119,765,186 - 119,791,477 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	119,765,187 - 119,790,889 (-)	Ensembl	GRCm38		mm10	GRCm38
Celera	13	124,146,114 - 124,171,617 (-)	NCBI		Celera
Cytogenetic Map	13	D2.3	NCBI

Znf131
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955446	19,065,927 - 19,106,456 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955446	19,066,902 - 19,106,458 (-)	NCBI	ChiLan1.0	ChiLan1.0

ZNF131
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	5	65,309,746 - 65,365,018 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	67,205,632 - 67,258,461 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	72,251,391 - 72,305,812 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	72,251,391 - 72,305,772 (-)	Ensembl	panpan1.1		panPan2

ZNF131
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	66,738,301 - 66,769,015 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	66,739,148 - 66,769,075 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	66,499,412 - 66,530,539 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	67,230,060 - 67,261,190 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	67,230,140 - 67,260,562 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	66,990,565 - 67,021,905 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	67,119,736 - 67,150,860 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	67,656,051 - 67,687,181 (-)	NCBI		UU_Cfam_GSD_1.0

Znf131
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	210,018,310 - 210,048,120 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936480	18,954,803 - 18,984,552 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936480	18,954,805 - 18,984,606 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF131
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	27,813,997 - 27,846,942 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	27,813,974 - 27,846,872 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	29,348,274 - 29,357,099 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC103215214
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	41,907,302 - 41,961,896 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	41,908,115 - 41,962,352 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666071	32,358,404 - 32,415,433 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf131
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624759	11,935,812 - 11,979,116 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Zfp131
91 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	435
Count of miRNA genes:	244
Interacting mature miRNAs:	293
Transcripts:	ENSRNOT00000021608
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61355	Bp36	Blood pressure QTL 36	2.9		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	2	5873687	102844969	Rat
738012	Anxrr3	Anxiety related response QTL 3	3.8		exploratory behavior trait (VT:0010471)	percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)	2	9023519	54023519	Rat
10755430	Coatc6	Coat color QTL 6		0.02576	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	2	11591100	56591100	Rat
731184	Mamtr4	Mammary tumor resistance QTL 4		0.0003	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	2	16491740	61491740	Rat
1357990	Ael1	Aortic elastin QTL 1	3.1	0.00091	aorta elastin amount (VT:0003905)	aortic elastin	2	19076825	64076825	Rat
731167	Glom4	Glomerulus QTL 4	2.4	0.0082	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	2	20304672	65304672	Rat
2300168	Bmd47	Bone mineral density QTL 47	6.6	0.0001	femur mineral mass (VT:0010011)	bone mineral density (CMO:0001226)	2	20662448	65662448	Rat
10402051	Gdil2	Gastrointestinal dilation QTL 2			enteric ganglion morphology trait (VT:0001045)	length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)	2	24903853	74786777	Rat
1302794	Stl27	Serum triglyceride level QTL 27	4.4	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	25413423	143657569	Rat
1358894	Kidm24	Kidney mass QTL 24	4.03		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358901	Cm38	Cardiac mass QTL 38	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1358887	Bw50	Body weight QTL 50	2.39		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
1358908	Bw49	Body weight QTL 49	3.36		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
1354617	Bp240	Blood pressure QTL 240	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	26917817	81754745	Rat
1354617	Bp240	Blood pressure QTL 240	4		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	26917817	81754745	Rat
1354617	Bp240	Blood pressure QTL 240	4		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	26917817	81754745	Rat
1354603	Bp243	Blood pressure QTL 243	3.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	26917817	127469484	Rat
2290453	Scl55	Serum cholesterol level QTL 55	2.83		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	2	26917817	136917119	Rat
9590095	Sffal3	Serum free fatty acids level QTL 3	6.78	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	2	27157160	72157160	Rat
1300160	Hrtrt3	Heart rate QTL 3	3.62		heart pumping trait (VT:2000009)	absolute change in heart rate (CMO:0000534)	2	29971593	51729300	Rat
10755434	Coatc7	Coat color QTL 7		0.04794	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	2	30648065	75648065	Rat
10755436	Coatc8	Coat color QTL 8		0.02431	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	2	35023117	80023117	Rat
61371	Edpm1	Estrogen-dependent pituitary mass QTL 1	4	0.05	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	35134841	88029593	Rat
70174	BpQTLCluster2	Blood pressure QTL cluster 2	4.24		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	40067944	102785628	Rat
70174	BpQTLCluster2	Blood pressure QTL cluster 2	4.24		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	40067944	102785628	Rat
70174	BpQTLCluster2	Blood pressure QTL cluster 2	4.24		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	40067944	102785628	Rat
70174	BpQTLCluster2	Blood pressure QTL cluster 2	4.24		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	2	40067944	102785628	Rat
70174	BpQTLCluster2	Blood pressure QTL cluster 2	4.24		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	2	40067944	102785628	Rat
12879863	Bp402	Blood pressure QTL 402		0.003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	41125789	56532139	Rat
1300155	Bp174	Blood pressure QTL 174	4.09		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	2	42804607	60653831	Rat
2293835	Kiddil5	Kidney dilation QTL 5	3.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	157142209	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	182042367	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	43154682	202446871	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	43154682	202446871	Rat
2293676	Bmd19	Bone mineral density QTL 19	10.7	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	2	43162366	111362592	Rat
2293682	Bmd24	Bone mineral density QTL 24	8.9	0.0001	femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	2	43162366	111362592	Rat
2293671	Bss44	Bone structure and strength QTL 44	10.97	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	2	43162366	148478373	Rat
631208	Bw1	Body weight QTL1	5.09		mesenteric fat pad mass (VT:0010427)	mesenteric fat pad weight to body weight ratio (CMO:0000654)	2	43171017	83575226	Rat
1354601	Slep1	Serum leptin concentration QTL 1	5.39		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	2	43171017	184114403	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	46123260	202447032	Rat

Markers in Region

D2Rat202

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	51,729,139 - 51,729,300 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	52,507,645 - 52,507,805	NCBI	Rnor6.0
Rnor_5.0	2	70,871,440 - 70,871,600	UniSTS	Rnor5.0
RGSC_v3.4	2	51,821,000 - 51,821,161	RGD	RGSC3.4
RGSC_v3.4	2	51,821,001 - 51,821,161	UniSTS	RGSC3.4
RGSC_v3.1	2	51,749,233 - 51,749,394	RGD
Celera	2	47,383,887 - 47,384,047	UniSTS
SHRSP x BN Map	2	22.9498	RGD
SHRSP x BN Map	2	22.9498	UniSTS
Cytogenetic Map	2	q16	UniSTS

BF387209

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	51,729,351 - 51,729,502 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	52,507,857 - 52,508,007	NCBI	Rnor6.0
Rnor_5.0	2	70,871,652 - 70,871,802	UniSTS	Rnor5.0
RGSC_v3.4	2	51,821,213 - 51,821,363	UniSTS	RGSC3.4
Celera	2	47,384,099 - 47,384,249	UniSTS
RH 3.4 Map	2	330.5	UniSTS
Cytogenetic Map	2	q16	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	37	44	28	19	28	8	9	74	35	41	11	8
Low		6	13	13		13		2
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001100698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008760772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102252	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC098842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC161974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225691	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227804	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000021608 ⟹ ENSRNOP00000021608

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	51,725,541 - 51,753,091 (-)	Ensembl
Rnor_6.0 Ensembl	2	52,504,315 - 52,531,085 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000089303 ⟹ ENSRNOP00000070103

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	51,725,541 - 51,753,091 (-)	Ensembl
Rnor_6.0 Ensembl	2	52,504,665 - 52,531,083 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000104695 ⟹ ENSRNOP00000089583

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	51,725,831 - 51,753,017 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000107342 ⟹ ENSRNOP00000086042

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	51,735,710 - 51,753,639 (-)	Ensembl

RefSeq Acc Id:

NM_001100698 ⟹ NP_001094168

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	51,725,789 - 51,752,584 (-)	NCBI
Rnor_6.0	2	52,504,294 - 52,531,085 (-)	NCBI
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI
RGSC_v3.4	2	51,817,650 - 51,844,634 (-)	RGD
Celera	2	47,380,536 - 47,407,328 (-)	RGD

Sequence:

show sequence

CCCTGAAGCACCCCGACGGCCATGGAGGCTGAAGAAACGATGGAATGCCTTCAGGAGTTTCCTG
AACATCATAAAATGATCTTGGACCGATTGAATGAACAACGGGAGCAGGACCGGTTTACGGACAT
CACCCTGATTGTTGACGGACACCATTTTAAGGCACACAAGGCTGTTCTGGCTGCCTGCAGTAAG
TTCTTCTACAAATTCTTTCAGGAGTTCACTCAAGAACCTTTGGTTGAAATTGAAGGTGTTAGTA
AAATGGCTTTTCGACACTTAATTGAGTTCACATACACAGCAAAGCTAATGATACAAGGGGAAGA
AGAAGCCAATGATGTGTGGAAAGCAGCAGAGTTTCTACAAATGCTGGAAGCTATTAAAGCACTT
GAAGTCAGGAACAAAGAAAACTCAGCTCCATTAGAGGAAACTACTACAGGAAAAAATGAGGCAA
AAAAAAGAAAGATCGCAGAAACTTCCAATGTTATCACCGAGTCCTTGCCATCTGCAGAATCAGA
ACCTGTGGAAATCGAGGTGGAGATTGCTGAAGGCACAATTGAAGTAGAAGACGAAGGCATTGCA
GCTTTGGAGGAAATGGCTTCTGGCAAGCAGTCTATAAAGTACATACAGAGCACAGGCTCCTCCG
ATGACTCTGCTCTAGCACTGTTGGCAGATATCACCAGCAAGTACCGTCCAGGCGAAAGCAAAGG
ACAGATTAGCGAAGATGACTGTGCATCTGACCCCATAAGCAAACAGGTAGAAGGTATTGAAATT
GTGGAACTTCAGCTGTCACATGTGAAGGACTTGTTCCATTGTGAGAAATGTAACCGTTCGTTTA
AATTGTTTTACCATTTTAAGGAACACATGAAATCACACTCCACTGAGAGTTTCAAGTGTGAAAT
ATGCAATAAAAGGTATCTTCGAGAGAGTGCATGGAAACACCACCTAAACTGTTACCACCTTGAA
GAAGGTGGAGTAAGTAAGAAGCAAAGAACTGGGAAAAAAATTCACACATGCCAGTATTGTGAGA
AACAGTTTGACCACTTTGGACACTTTAAAGAACACCTTCGAAAACATACAGGTGAAAAACCTTT
TGAATGTTCAAATTGTCACGAGCGGTTTGCTAGAAATAGCACTCTCAAATGTCACCTCACTGCG
TGCCAAACTGGAGTAGGGGCAAAAAAGGGAAGGAAGAAGCTTTATGAATGCCAGGTCTGTAACA
GTGTATTTAACAGCTGGGACCAGTTCAAAGATCACTTGGTAATACACACTGGAGATAAACCCAA
CCATTGTACTCTGTGTGACTTGTGGTTTATGCAAGGAAATGAATTAAGGAGGCATCTTAGTGAT
GCTCACAATATTTCAGAGCGTATAGTGACTGAAGAAGTCCTTTCAGTAGAAACACACTTACAAA
CGGAACCAGTGACATCAATGACTATTATAGAACAAGTTGGGAAAGTGCATGTGTTACCATTGCT
TCAGGTCCAAGTGGATTCTGCACAAGTAACTGTGGAACAAGTTCATCCAGATCTGCTCCAAGAC
GGCCAAGTGCATGACTCACAAATGAGTGCGCTTCCAGAGCAGGTCCAGGTGAGTTACCTGGAGG
TGGGTCGGATCCAGACTGAAGAAGGTACTGAAGTACACGTTGAAGAGCTTCACGTCGAACGGGT
CAATCAGATGCCAGTGGAAGTACAAACTGAGCTTCTAGAAGCTGACTTGGATCACATGACCCCC
GAAATGATGAGCCAAGAGGAGAGCGAACCTAACCATGCAGATGCTGCCATGGAAGAGTACGAAG
ACACTGAGGGCTTGGAGACCAAACCAGGAGAGCACTCCCACGCTGTAAAAGTGGACCACGACAG
GACATCTATGCCCGTTTTAGAATGAAATAGCAGTGATATTTCTAAATTTACATTTGGGGTAAAC
TGATGGGCAGTGTGATCGTAAGCTATCAAATAAGTGGACCAAAGTTAAGCTATTTCTGTTGTGC
TGAACTGTTTCTATGGAAACAGGCTGATGTCCTTCCAGTTAATGCCACAGAGTGGGAATATTCC
TCATAATGAGTGGGAGCTTTGAGAAGTATATTTCTGGTAACTTAAATGAATTATATTCTTATTA
TATAGTTGGGTCCGAATGCATCTATTTTCATTGTGGTAAGGGTCTCCGTGTCCTCTTCCCCAGG
TCATGTCTCTCCTTAAATTCTTTGCATATTATAAAATCATACTTAAAACCATTAGAATACATAC
ATTTGTATTCTAATGCATGTTTAAAAATTGAGTATGTAGGCAACACAAGGCTGCATGAGGGAAG
TGCATTGTTACTGTGCAGTTAATAGTTGGGGGCTAGCTTTAATTCGAACAACATTCTTGTCTAA
CTAGTGGCTACAAATGCTGTCCCCACAACAGAAACGGTGGTGGCAGAATTTCTAGAATGTTAAA
AAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006231960 ⟹ XP_006232022

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	51,725,191 - 51,753,646 (-)	NCBI
Rnor_6.0	2	52,503,693 - 52,532,097 (-)	NCBI
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI

Sequence:

show sequence

GATGGCGAGGAGCTGCCTGGGTACCGGAGCACCTGCGCCATGGGAGGGGAGATTGTGGAAAGAG
AGGCACGTGGAGCCGAAGCCAGCTAGAGCACCCCGACGGCCATGGAGGCTGAAGAAACGATGGA
ATGCCTTCAGGAGTTTCCTGAACATCATAAAATGATCTTGGACCGATTGAATGAACAACGGGAG
CAGGACCGGTTTACGGACATCACCCTGATTGTTGACGGACACCATTTTAAGGCACACAAGGCTG
TTCTGGCTGCCTGCAGTAAGTTCTTCTACAAATTCTTTCAGGAGTTCACTCAAGAACCTTTGGT
TGAAATTGAAGGTGTTAGTAAAATGGCTTTTCGACACTTAATTGAGTTCACATACACAGCAAAG
CTAATGATACAAGGGGAAGAAGAAGCCAATGATGTGTGGAAAGCAGCAGAGTTTCTACAAATGC
TGGAAGCTATTAAAGCACTTGAAGTCAGGAACAAAGAAAACTCAGCTCCATTAGAGGAAACTAC
TACAGGAAAAAATGAGGCAAAAAAAAGAAAGATCGCAGAAACTTCCAATGTTATCACCGAGTCC
TTGCCATCTGCAGAATCAGAACCTGTGGAAATCGAGGTGGAGATTGCTGAAGGCACAATTGAAG
TAGAAGACGAAGGCATTGCAGCTTTGGAGGAAATGGCTTCTGGCAAGCAGTCTATAAAGTACAT
ACAGAGCACAGGCTCCTCCGATGACTCTGCTCTAGCACTGTTGGCAGATATCACCAGCAAGTAC
CGTCCAGGCGAAAGCAAAGGACAGATTAGCGAAGATGACTGTGCATCTGACCCCATAAGCAAAC
AGGTAGAAGGTATTGAAATTGTGGAACTTCAGCTGTCACATGTGAAGGACTTGTTCCATTGTGA
GAAATGTAACCGTTCGTTTAAATTGTTTTACCATTTTAAGGAACACATGAAATCACACTCCACT
GAGAGTTTCAAGTGTGAAATATGCAATAAAAGGTATCTTCGAGAGAGTGCATGGAAACACCACC
TAAACTGTTACCACCTTGAAGAAGGTGGAGTAAGTAAGAAGCAAAGAACTGGGAAAAAAATTCA
CACATGCCAGTATTGTGAGAAACAGTTTGACCACTTTGGACACTTTAAAGAACACCTTCGAAAA
CATACAGGTGAAAAACCTTTTGAATGTTCAAATTGTCACGAGCGGTTTGCTAGAAATAGCACTC
TCAAATGTCACCTCACTGCGTGCCAAACTGGAGTAGGGGCAAAAAAGGGAAGGAAGAAGCTTTA
TGAATGCCAGGTCTGTAACAGTGTATTTAACAGCTGGGACCAGTTCAAAGATCACTTGGTAATA
CACACTGGAGATAAACCCAACCATTGTACTCTGTGTGACTTGTGGTTTATGCAAGGAAATGAAT
TAAGGAGGCATCTTAGTGATGCTCACAATATTTCAGAGCGTATAGTGACTGAAGAAGTCCTTTC
AGTAGAAACACACTTACAAACGGAACCAGTGACATCAATGACTATTATAGAACAAGTTGGGAAA
GTGCATGTGTTACCATTGCTTCAGGTCCAAGTGGATTCTGCACAAGTAACTGTGGAACAAGTTC
ATCCAGATCTGCTCCAAGACGGCCAAGTGCATGACTCACAAATGAGTGCGCTTCCAGAGCAGGT
CCAGGTGAGTTACCTGGAGGTGGGTCGGATCCAGACTGAAGAAGGTACTGAAGTACACGTTGAA
GAGCTTCACGTCGAACGGGTCAATCAGATGCCAGTGGAAGTACAAACTGAGCTTCTAGAAGCTG
ACTTGGATCACATGACCCCCGAAATGATGAGCCAAGAGGAGAGCGAACCTAACCATGCAGATGC
TGCCATGGAAGAGTACGAAGACACTGAGGGCTTGGAGACCAAACCAGGAGAGCACTCCCACGCT
GTAAAAGTGGACCACGACAGGACATCTATGCCCGTTTTAGAATGAAATAGCAGTGATATTTCTA
AATTTACATTTGGGGTAAACTGATGGGCAGTGTGATCGTAAGCTATCAAATAAGTGGACCAAAG
TTAAGCTATTTCTGTTGTGCTGAACTGTTTCTATGGAAACAGGCTGATGTCCTTCCAGTTAATG
CCACAGAGTGGGAATATTCCTCATAATGAGTGGGAGCTTTGAGAAGTATATTTCTGGTAACTTA
AATGAATTATATTCTTATTATATAGTTGGGTCCGAATGCATCTATTTTCATTGTGGTAAGGGTC
TCCGTGTCCTCTTCCCCAGGTCATGTCTCTCCTTAAATTCTTTGCATATTATAAAATCATACTT
AAAACCATTAGAATACATACATTTGTATTCTAATGCATGTTTAAAAATTGAGTATGTAGGCAAC
ACAAGGCTGCATGAGGGAAGTGCATTGTTACTGTGCAGTTAATAGTTGGGGGCTAGCTTTAATT
CGAACAACATTCTTGTCTAACTAGTGGCTACAAATGCTGTCCCCACAACAGAAACGGTGGTGGC
AGAATTTCTAGAATGTTAAAAAAAAAAAAAAAAAAAAACCACCCTGTGCCTTTTCAAAAACCAA
CAAAACTTCAGAAAAACATCTCTGGTTCTTTCAAAGTTTGTGTTTTAAAGAGCAGCATAAAGTG
CTCTGGTACTTGGTATTTTTGCTTAAAATGACAATTACCAATTCATTTTCCTTTAAGTTACATT
GAAAATTTTTCATTTAACGGCGGCTAAAGGGCCATTTTCAATGGAAAAAATTCATTTCCATCTG
TGGTAAACTTTATTTTGATGAGAACTTGCACTAGTATTTTACCACCAGATGGGAAAAGATTAGC
TGAGCATCATTTTAAAATTAATGTATTTAAATAAAGTACAGAGGAAACGTATGTATATAATATA
TCAGGCTTTGTTTTGAGTGGACTCTTTTCCCCCCAATCCTTAATGTAAAGATTTTGTGCTATAA
CTTTTAAAGCCATACAAATAAGAGTGCTAAACTGTGGACTTAAAAGTAGTTGTGTAAATATTTT
TAATCAGTATTACTTGGAAAATAAAAATATAACAACCACATAAAATCAATATGCTATTTTCTTT
ACCTGTTAAATACTGGGAGATAATTTACATTTTAAAGTAAACTTTAAAATTATGTGTTCATGA

hide sequence

RefSeq Acc Id:

XM_006231961 ⟹ XP_006232023

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	51,725,191 - 51,752,930 (-)	NCBI
Rnor_6.0	2	52,503,185 - 52,531,522 (-)	NCBI
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI

Sequence:

show sequence

GGGAGAGGAGGGAGGGCGCCGGAGGGAGAGGCGACCCGGGGAGTCGTTGTGGGCCGCGGGCCGG
ATCGGGGCTGGGGCTGCGGCAGCCTGAGCCGGGCGGAAGTCTTGGCGGGCCGTTGGGAGGCCGC
CGAGGCTGTTCGGGGTCCTCCCCGGCCGGACTTGCGCTCCCGGGCGCCCTGAGCCTCCGGCACT
GTGCCCACCCCGCTCCAGCTCGCGTCTCCAGACTCCAATTAGAGCACCCCGACGGCCATGGAGG
CTGAAGAAACGATGGAATGCCTTCAGGAGTTTCCTGAACATCATAAAATGATCTTGGACCGATT
GAATGAACAACGGGAGCAGGACCGGTTTACGGACATCACCCTGATTGTTGACGGACACCATTTT
AAGGCACACAAGGCTGTTCTGGCTGCCTGCAGTAAGTTCTTCTACAAATTCTTTCAGGAGTTCA
CTCAAGAACCTTTGGTTGAAATTGAAGGTGTTAGTAAAATGGCTTTTCGACACTTAATTGAGTT
CACATACACAGCAAAGCTAATGATACAAGGGGAAGAAGAAGCCAATGATGTGTGGAAAGCAGCA
GAGTTTCTACAAATGCTGGAAGCTATTAAAGCACTTGAAGTCAGGAACAAAGAAAACTCAGCTC
CATTAGAGGAAACTACTACAGGAAAAAATGAGGCAAAAAAAAGAAAGATCGCAGAAACTTCCAA
TGTTATCACCGAGTCCTTGCCATCTGCAGAATCAGAACCTGTGGAAATCGAGGTGGAGATTGCT
GAAGGCACAATTGAAGTAGAAGACGAAGGCATTGCAGCTTTGGAGGAAATGGCTTCTGGCAAGC
AGTCTATAAAGTACATACAGAGCACAGGCTCCTCCGATGACTCTGCTCTAGCACTGTTGGCAGA
TATCACCAGCAAGTACCGTCCAGGCGAAAGCAAAGGACAGATTAGCGAAGATGACTGTGCATCT
GACCCCATAAGCAAACAGGTAGAAGGTATTGAAATTGTGGAACTTCAGCTGTCACATGTGAAGG
ACTTGTTCCATTGTGAGAAATGTAACCGTTCGTTTAAATTGTTTTACCATTTTAAGGAACACAT
GAAATCACACTCCACTGAGAGTTTCAAGTGTGAAATATGCAATAAAAGGTATCTTCGAGAGAGT
GCATGGAAACACCACCTAAACTGTTACCACCTTGAAGAAGGTGGAGTAAGTAAGAAGCAAAGAA
CTGGGAAAAAAATTCACACATGCCAGTATTGTGAGAAACAGTTTGACCACTTTGGACACTTTAA
AGAACACCTTCGAAAACATACAGGTGAAAAACCTTTTGAATGTTCAAATTGTCACGAGCGGTTT
GCTAGAAATAGCACTCTCAAATGTCACCTCACTGCGTGCCAAACTGGAGTAGGGGCAAAAAAGG
GAAGGAAGAAGCTTTATGAATGCCAGGTCTGTAACAGTGTATTTAACAGCTGGGACCAGTTCAA
AGATCACTTGGTAATACACACTGGAGATAAACCCAACCATTGTACTCTGTGTGACTTGTGGTTT
ATGCAAGGAAATGAATTAAGGAGGCATCTTAGTGATGCTCACAATATTTCAGAGCGTATAGTGA
CTGAAGAAGTCCTTTCAGTAGAAACACACTTACAAACGGAACCAGTGACATCAATGACTATTAT
AGAACAAGTTGGGAAAGTGCATGTGTTACCATTGCTTCAGGTCCAAGTGGATTCTGCACAAGTA
ACTGTGGAACAAGTTCATCCAGATCTGCTCCAAGACGGCCAAGTGCATGACTCACAAATGAGTG
CGCTTCCAGAGCAGGTCCAGGTGAGTTACCTGGAGGTGGGTCGGATCCAGACTGAAGAAGGTAC
TGAAGTACACGTTGAAGAGCTTCACGTCGAACGGGTCAATCAGATGCCAGTGGAAGTACAAACT
GAGCTTCTAGAAGCTGACTTGGATCACATGACCCCCGAAATGATGAGCCAAGAGGAGAGCGAAC
CTAACCATGCAGATGCTGCCATGGAAGAGTACGAAGACACTGAGGGCTTGGAGACCAAACCAGG
AGAGCACTCCCACGCTGTAAAAGTGGACCACGACAGGACATCTATGCCCGTTTTAGAATGAAAT
AGCAGTGATATTTCTAAATTTACATTTGGGGTAAACTGATGGGCAGTGTGATCGTAAGCTATCA
AATAAGTGGACCAAAGTTAAGCTATTTCTGTTGTGCTGAACTGTTTCTATGGAAACAGGCTGAT
GTCCTTCCAGTTAATGCCACAGAGTGGGAATATTCCTCATAATGAGTGGGAGCTTTGAGAAGTA
TATTTCTGGTAACTTAAATGAATTATATTCTTATTATATAGTTGGGTCCGAATGCATCTATTTT
CATTGTGGTAAGGGTCTCCGTGTCCTCTTCCCCAGGTCATGTCTCTCCTTAAATTCTTTGCATA
TTATAAAATCATACTTAAAACCATTAGAATACATACATTTGTATTCTAATGCATGTTTAAAAAT
TGAGTATGTAGGCAACACAAGGCTGCATGAGGGAAGTGCATTGTTACTGTGCAGTTAATAGTTG
GGGGCTAGCTTTAATTCGAACAACATTCTTGTCTAACTAGTGGCTACAAATGCTGTCCCCACAA
CAGAAACGGTGGTGGCAGAATTTCTAGAATGTTAAAAAAAAAAAAAAAAAAAAACCACCCTGTG
CCTTTTCAAAAACCAACAAAACTTCAGAAAAACATCTCTGGTTCTTTCAAAGTTTGTGTTTTAA
AGAGCAGCATAAAGTGCTCTGGTACTTGGTATTTTTGCTTAAAATGACAATTACCAATTCATTT
TCCTTTAAGTTACATTGAAAATTTTTCATTTAACGGCGGCTAAAGGGCCATTTTCAATGGAAAA
AATTCATTTCCATCTGTGGTAAACTTTATTTTGATGAGAACTTGCACTAGTATTTTACCACCAG
ATGGGAAAAGATTAGCTGAGCATCATTTTAAAATTAATGTATTTAAATAAAGTACAGAGGAAAC
GTATGTATATAATATATCAGGCTTTGTTTTGAGTGGACTCTTTTCCCCCCAATCCTTAATGTAA
AGATTTTGTGCTATAACTTTTAAAGCCATACAAATAAGAGTGCTAAACTGTGGACTTAAAAGTA
GTTGTGTAAATATTTTTAATCAGTATTACTTGGAAAATAAAAATATAACAACCACATAAAATCA
ATATGCTATTTTCTTTACCTGTTAAATACTGGGAGATAATTTACATTTTAAAGTAAACTTTAAA
ATTATGTGTTCATGACTCTTTTTAAAGTTATTTAATTTTATGTGTGTGGGTGTTGTGCTTGTAT
GTATGACTGCGCACCGTGTGTGCCTGATGACTCCCTCCCCTAACACAGAAGGTGCTTAGAGTCG
GTTGTGAGCTGCCATGCGGGTGCTGAGAAGCAAACCTGGGTCCCCAGAAAGAAGAGCCATCGCT
GGCCTCGCTAATGATCAGTTTGGAGATGCTTGATATATTTTTGTGACTGTGGTAAACATGGCTC
ATTAAGATACAAGATTGTTGTCACATACTTCCTAACCCAAGACTTGCTCGGAAGGCCAGACACA
CGTTACTTATATCTTTGTAGATCTTATTGACATACAAGTGTTTTTAGTAGTGCCTATTTATTTT
AAACATATTTTTCTACTTGTTTTTAAAGAGATCAGCTCAAGCAATACTTTGGTAATTGTGGAAT
TAAATGGTAACAAGTCACAAAAGTTTGCTGAAGAGGTGTCAGTTTAATATTAAGATCATGCTTA
CAAAGATCACA

hide sequence

RefSeq Acc Id:

XM_006231962 ⟹ XP_006232024

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	51,722,774 - 51,753,416 (-)	NCBI
Rnor_6.0	2	52,503,185 - 52,531,681 (-)	NCBI
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI

Sequence:

show sequence

TCCCAACAGGGCCGCAGGGGCGTGGCCAGGCGTTGCGGGGGATTGGCGCTCCGGGTGCGTCCGC
GTCCGCCGCGGTGACGCAGCACGTCGACGTAAGTGACGCGCAGGCCCGGGCCGCTCCTCCTTCC
CTGAAGCACCCCGACGGCCATGGAGGCTGAAGAAACGATGGAATGCCTTCAGGAGTTTCCTGAA
CATCATAAAATGATCTTGGACCGATTGAATGAACAACGGGAGCAGGACCGGTTTACGGACATCA
CCCTGATTGTTGACGGACACCATTTTAAGGCACACAAGGCTGTTCTGGCTGCCTGCAGTAAGTT
CTTCTACAAATTCTTTCAGGAGTTCACTCAAGAACCTTTGGTTGAAATTGAAGGTGTTAGTAAA
ATGGCTTTTCGACACTTAATTGAGTTCACATACACAGCAAAGCTAATGATACAAGGGGAAGAAG
AAGCCAATGATGTGTGGAAAGCAGCAGAGTTTCTACAAATGCTGGAAGCTATTAAAGCACTTGA
AGTCAGGAACAAAGAAAACTCAGCTCCATTAGAGGAAACTACTACAGGAAAAAATGAGGCAAAA
AAAAGAAAGATCGCAGAAACTTCCAATGTTATCACCGAGTCCTTGCCATCTGCAGAATCAGAAC
CTGTGGAAATCGAGGTGGAGATTGCTGAAGGCACAATTGAAGTAGAAGACGAAGGCATTGCAGC
TTTGGAGGAAATGGCTTCTGGCAAGCAGTCTATAAAGTACATACAGAGCACAGGCTCCTCCGAT
GACTCTGCTCTAGCACTGTTGGCAGATATCACCAGCAAGTACCGTCCAGGCGAAAGCAAAGGAC
AGATTAGCGAAGATGACTGTGCATCTGACCCCATAAGCAAACAGGTAGAAGGTATTGAAATTGT
GGAACTTCAGCTGTCACATGTGAAGGACTTGTTCCATTGTGAGAAATGTAACCGTTCGTTTAAA
TTGTTTTACCATTTTAAGGAACACATGAAATCACACTCCACTGAGAGTTTCAAGTGTGAAATAT
GCAATAAAAGGTATCTTCGAGAGAGTGCATGGAAACACCACCTAAACTGTTACCACCTTGAAGA
AGGTGGAGTAAGTAAGAAGCAAAGAACTGGGAAAAAAATTCACACATGCCAGTATTGTGAGAAA
CAGTTTGACCACTTTGGACACTTTAAAGAACACCTTCGAAAACATACAGGTGAAAAACCTTTTG
AATGTTCAAATTGTCACGAGCGGTTTGCTAGAAATAGCACTCTCAAATGTCACCTCACTGCGTG
CCAAACTGGAGTAGGGGCAAAAAAGGGAAGGAAGAAGCTTTATGAATGCCAGGTCTGTAACAGT
GTATTTAACAGCTGGGACCAGTTCAAAGATCACTTGGTAATACACACTGGAGATAAACCCAACC
ATTGTACTCTGTGTGACTTGTGGTTTATGCAAGGAAATGAATTAAGGAGGCATCTTAGTGATGC
TCACAATATTTCAGAGCGTATAGTGACTGAAGAAGTCCTTTCAGTAGAAACACACTTACAAACG
GAACCAGTGACATCAATGACTATTATAGAACAAGTTGGGAAAGTGCATGTGTTACCATTGCTTC
AGGTCCAAGTGGATTCTGCACAAGTAACTGTGGAACAAGTTCATCCAGATCTGCTCCAAGACGG
CCAAGTGCATGACTCACAAATGAGTGCGCTTCCAGAGCAGGTCCAGGTGAGTTACCTGGAGGTG
GGTCGGATCCAGACTGAAGAAGGTACTGAAGTACACGTTGAAGAGCTTCACGTCGAACGGGTCA
ATCAGATGCCAGTGGAAGTACAAACTGAGCTTCTAGAAGCTGACTTGGATCACATGACCCCCGA
AATGATGAGCCAAGAGGAGAGCGAACCTAACCATGCAGATGCTGCCATGGAAGAGTACGAAGAC
ACTGAGGGCTTGGAGACCAAACCAGGAGAGCACTCCCACGCTGTAAAAGTGGACCACGACAGGA
CATCTATGCCCGTTTTAGAATGAAATAGCAGTGATATTTCTAAATTTACATTTGGGGTAAACTG
ATGGGCAGTGTGATCGTAAGCTATCAAATAAGTGGACCAAAGTTAAGCTATTTCTGTTGTGCTG
AACTGTTTCTATGGAAACAGGCTGATGTCCTTCCAGTTAATGCCACAGAGTGGGAATATTCCTC
ATAATGAGTGGGAGCTTTGAGAAGTATATTTCTGGTAACTTAAATGAATTATATTCTTATTATA
TAGTTGGGTCCGAATGCATCTATTTTCATTGTGGTAAGGGTCTCCGTGTCCTCTTCCCCAGGTC
ATGTCTCTCCTTAAATTCTTTGCATATTATAAAATCATACTTAAAACCATTAGAATACATACAT
TTGTATTCTAATGCATGTTTAAAAATTGAGTATGTAGGCAACACAAGGCTGCATGAGGGAAGTG
CATTGTTACTGTGCAGTTAATAGTTGGGGGCTAGCTTTAATTCGAACAACATTCTTGTCTAACT
AGTGGCTACAAATGCTGTCCCCACAACAGAAACGGTGGTGGCAGAATTTCTAGAATGTTAAAAA
AAAAAAAAAAAAAAAACCACCCTGTGCCTTTTCAAAAACCAACAAAACTTCAGAAAAACATCTC
TGGTTCTTTCAAAGTTTGTGTTTTAAAGAGCAGCATAAAGTGCTCTGGTACTTGGTATTTTTGC
TTAAAATGACAATTACCAATTCATTTTCCTTTAAGTTACATTGAAAATTTTTCATTTAACGGCG
GCTAAAGGGCCATTTTCAATGGAAAAAATTCATTTCCATCTGTGGTAAACTTTATTTTGATGAG
AACTTGCACTAGTATTTTACCACCAGATGGGAAAAGATTAGCTGAGCATCATTTTAAAATTAAT
GTATTTAAATAAAGTACAGAGGAAACGTATGTATATAATATATCAGGCTTTGTTTTGAGTGGAC
TCTTTTCCCCCCAATCCTTAATGTAAAGATTTTGTGCTATAACTTTTAAAGCCATACAAATAAG
AGTGCTAAACTGTGGACTTAAAAGTAGTTGTGTAAATATTTTTAATCAGTATTACTTGGAAAAT
AAAAATATAACAACCACATAAAATCAATATGCTATTTTCTTTACCTGTTAAATACTGGGAGATA
ATTTACATTTTAAAGTAAACTTTAAAATTATGTGTTCATGACTCTTTTTAAAGTTATTTAATTT
TATGTGTGTGGGTGTTGTGCTTGTATGTATGACTGCGCACCGTGTGTGCCTGATGACTCCCTCC
CCTAACACAGAAGGTGCTTAGAGTCGGTTGTGAGCTGCCATGCGGGTGCTGAGAAGCAAACCTG
GGTCCCCAGAAAGAAGAGCCATCGCTGGCCTCGCTAATGATCAGTTTGGAGATGCTTGATATAT
TTTTGTGACTGTGGTAAACATGGCTCATTAAGATACAAGATTGTTGTCACATACTTCCTAACCC
AAGACTTGCTCGGAAGGCCAGACACACGTTACTTATATCTTTGTAGATCTTATTGACATACAAG
TGTTTTTAGTAGTGCCTATTTATTTTAAACATATTTTTCTACTTGTTTTTAAAGAGATCAGCTC
AAGCAATACTTTGGTAATTGTGGAATTAAATGGTAACAAGTCACAAAAGTTTGCTGAAGAGGTG
TCAGTTTAATATTAAGATCATGCTTACAAAGATCACA

hide sequence

RefSeq Acc Id:

XM_006231963 ⟹ XP_006232025

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	51,722,774 - 51,753,416 (-)	NCBI
Rnor_6.0	2	52,503,185 - 52,531,686 (-)	NCBI
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI

Sequence:

show sequence

CCTCCTCCCAACAGGGCCGCAGGGGCGTGGCCAGGCGTTGCGGGGGATTGGCGCTCCGGGTGCG
TCCGCGTCCGCCGCGGTGACGCAGCACGTCGACAGCACCCCGACGGCCATGGAGGCTGAAGAAA
CGATGGAATGCCTTCAGGAGTTTCCTGAACATCATAAAATGATCTTGGACCGATTGAATGAACA
ACGGGAGCAGGACCGGTTTACGGACATCACCCTGATTGTTGACGGACACCATTTTAAGGCACAC
AAGGCTGTTCTGGCTGCCTGCAGTAAGTTCTTCTACAAATTCTTTCAGGAGTTCACTCAAGAAC
CTTTGGTTGAAATTGAAGGTGTTAGTAAAATGGCTTTTCGACACTTAATTGAGTTCACATACAC
AGCAAAGCTAATGATACAAGGGGAAGAAGAAGCCAATGATGTGTGGAAAGCAGCAGAGTTTCTA
CAAATGCTGGAAGCTATTAAAGCACTTGAAGTCAGGAACAAAGAAAACTCAGCTCCATTAGAGG
AAACTACTACAGGAAAAAATGAGGCAAAAAAAAGAAAGATCGCAGAAACTTCCAATGTTATCAC
CGAGTCCTTGCCATCTGCAGAATCAGAACCTGTGGAAATCGAGGTGGAGATTGCTGAAGGCACA
ATTGAAGTAGAAGACGAAGGCATTGCAGCTTTGGAGGAAATGGCTTCTGGCAAGCAGTCTATAA
AGTACATACAGAGCACAGGCTCCTCCGATGACTCTGCTCTAGCACTGTTGGCAGATATCACCAG
CAAGTACCGTCCAGGCGAAAGCAAAGGACAGATTAGCGAAGATGACTGTGCATCTGACCCCATA
AGCAAACAGGTAGAAGGTATTGAAATTGTGGAACTTCAGCTGTCACATGTGAAGGACTTGTTCC
ATTGTGAGAAATGTAACCGTTCGTTTAAATTGTTTTACCATTTTAAGGAACACATGAAATCACA
CTCCACTGAGAGTTTCAAGTGTGAAATATGCAATAAAAGGTATCTTCGAGAGAGTGCATGGAAA
CACCACCTAAACTGTTACCACCTTGAAGAAGGTGGAGTAAGTAAGAAGCAAAGAACTGGGAAAA
AAATTCACACATGCCAGTATTGTGAGAAACAGTTTGACCACTTTGGACACTTTAAAGAACACCT
TCGAAAACATACAGGTGAAAAACCTTTTGAATGTTCAAATTGTCACGAGCGGTTTGCTAGAAAT
AGCACTCTCAAATGTCACCTCACTGCGTGCCAAACTGGAGTAGGGGCAAAAAAGGGAAGGAAGA
AGCTTTATGAATGCCAGGTCTGTAACAGTGTATTTAACAGCTGGGACCAGTTCAAAGATCACTT
GGTAATACACACTGGAGATAAACCCAACCATTGTACTCTGTGTGACTTGTGGTTTATGCAAGGA
AATGAATTAAGGAGGCATCTTAGTGATGCTCACAATATTTCAGAGCGTATAGTGACTGAAGAAG
TCCTTTCAGTAGAAACACACTTACAAACGGAACCAGTGACATCAATGACTATTATAGAACAAGT
TGGGAAAGTGCATGTGTTACCATTGCTTCAGGTCCAAGTGGATTCTGCACAAGTAACTGTGGAA
CAAGTTCATCCAGATCTGCTCCAAGACGGCCAAGTGCATGACTCACAAATGAGTGCGCTTCCAG
AGCAGGTCCAGGTGAGTTACCTGGAGGTGGGTCGGATCCAGACTGAAGAAGGTACTGAAGTACA
CGTTGAAGAGCTTCACGTCGAACGGGTCAATCAGATGCCAGTGGAAGTACAAACTGAGCTTCTA
GAAGCTGACTTGGATCACATGACCCCCGAAATGATGAGCCAAGAGGAGAGCGAACCTAACCATG
CAGATGCTGCCATGGAAGAGTACGAAGACACTGAGGGCTTGGAGACCAAACCAGGAGAGCACTC
CCACGCTGTAAAAGTGGACCACGACAGGACATCTATGCCCGTTTTAGAATGAAATAGCAGTGAT
ATTTCTAAATTTACATTTGGGGTAAACTGATGGGCAGTGTGATCGTAAGCTATCAAATAAGTGG
ACCAAAGTTAAGCTATTTCTGTTGTGCTGAACTGTTTCTATGGAAACAGGCTGATGTCCTTCCA
GTTAATGCCACAGAGTGGGAATATTCCTCATAATGAGTGGGAGCTTTGAGAAGTATATTTCTGG
TAACTTAAATGAATTATATTCTTATTATATAGTTGGGTCCGAATGCATCTATTTTCATTGTGGT
AAGGGTCTCCGTGTCCTCTTCCCCAGGTCATGTCTCTCCTTAAATTCTTTGCATATTATAAAAT
CATACTTAAAACCATTAGAATACATACATTTGTATTCTAATGCATGTTTAAAAATTGAGTATGT
AGGCAACACAAGGCTGCATGAGGGAAGTGCATTGTTACTGTGCAGTTAATAGTTGGGGGCTAGC
TTTAATTCGAACAACATTCTTGTCTAACTAGTGGCTACAAATGCTGTCCCCACAACAGAAACGG
TGGTGGCAGAATTTCTAGAATGTTAAAAAAAAAAAAAAAAAAAAACCACCCTGTGCCTTTTCAA
AAACCAACAAAACTTCAGAAAAACATCTCTGGTTCTTTCAAAGTTTGTGTTTTAAAGAGCAGCA
TAAAGTGCTCTGGTACTTGGTATTTTTGCTTAAAATGACAATTACCAATTCATTTTCCTTTAAG
TTACATTGAAAATTTTTCATTTAACGGCGGCTAAAGGGCCATTTTCAATGGAAAAAATTCATTT
CCATCTGTGGTAAACTTTATTTTGATGAGAACTTGCACTAGTATTTTACCACCAGATGGGAAAA
GATTAGCTGAGCATCATTTTAAAATTAATGTATTTAAATAAAGTACAGAGGAAACGTATGTATA
TAATATATCAGGCTTTGTTTTGAGTGGACTCTTTTCCCCCCAATCCTTAATGTAAAGATTTTGT
GCTATAACTTTTAAAGCCATACAAATAAGAGTGCTAAACTGTGGACTTAAAAGTAGTTGTGTAA
ATATTTTTAATCAGTATTACTTGGAAAATAAAAATATAACAACCACATAAAATCAATATGCTAT
TTTCTTTACCTGTTAAATACTGGGAGATAATTTACATTTTAAAGTAAACTTTAAAATTATGTGT
TCATGACTCTTTTTAAAGTTATTTAATTTTATGTGTGTGGGTGTTGTGCTTGTATGTATGACTG
CGCACCGTGTGTGCCTGATGACTCCCTCCCCTAACACAGAAGGTGCTTAGAGTCGGTTGTGAGC
TGCCATGCGGGTGCTGAGAAGCAAACCTGGGTCCCCAGAAAGAAGAGCCATCGCTGGCCTCGCT
AATGATCAGTTTGGAGATGCTTGATATATTTTTGTGACTGTGGTAAACATGGCTCATTAAGATA
CAAGATTGTTGTCACATACTTCCTAACCCAAGACTTGCTCGGAAGGCCAGACACACGTTACTTA
TATCTTTGTAGATCTTATTGACATACAAGTGTTTTTAGTAGTGCCTATTTATTTTAAACATATT
TTTCTACTTGTTTTTAAAGAGATCAGCTCAAGCAATACTTTGGTAATTGTGGAATTAAATGGTA
ACAAGTCACAAAAGTTTGCTGAAGAGGTGTCAGTTTAATATTAAGATCATGCTTACAAAGATCA
CA

hide sequence

RefSeq Acc Id:

XM_006231965 ⟹ XP_006232027

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	51,725,191 - 51,752,620 (-)	NCBI
Rnor_6.0	2	52,503,185 - 52,531,241 (-)	NCBI
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI

Sequence:

show sequence

CGGCCGCTCGGCTCGCCTTTCTTCTTCCCCAGCCTTGCTCTCGGCCTCCCCCTCCCCCTTCTTC
CCCGGTTCCTGGGTTTTGTTTTGTTTCTGCTTGTAGGGGTTTTGTGTCAACCCGAGCTCATGGG
TGTACATTATCATGCTCCTCTTTTGTAGAGCACCCCGACGGCCATGGAGGCTGAAGAAACGATG
GAATGCCTTCAGGAGTTTCCTGAACATCATAAAATGATCTTGGACCGATTGAATGAACAACGGG
AGCAGGACCGGTTTACGGACATCACCCTGATTGTTGACGGACACCATTTTAAGGCACACAAGGC
TGTTCTGGCTGCCTGCAGTAAGTTCTTCTACAAATTCTTTCAGGAGTTCACTCAAGAACCTTTG
GTTGAAATTGAAGGTGTTAGTAAAATGGCTTTTCGACACTTAATTGAGTTCACATACACAGCAA
AGCTAATGATACAAGGGGAAGAAGAAGCCAATGATGTGTGGAAAGCAGCAGAGTTTCTACAAAT
GCTGGAAGCTATTAAAGCACTTGAAGTCAGGAAGCAGCTGAGAAGAGATGATCCCTTTGTGGGG
ACAGCTGAACTTGATGACCAACCTGCCTTACTCAGATTTTTGGACAAGGAGGAGGAACAAAGAA
AACTCAGCTCCATTAGAGGAAACTACTACAGGAAAAAATGAGGCAAAAAAAAGAAAGATCGCAG
AAACTTCCAATGTTATCACCGAGTCCTTGCCATCTGCAGAATCAGAACCTGTGGAAATCGAGGT
GGAGATTGCTGAAGGCACAATTGAAGTAGAAGACGAAGGCATTGCAGCTTTGGAGGAAATGGCT
TCTGGCAAGCAGTCTATAAAGTACATACAGAGCACAGGCTCCTCCGATGACTCTGCTCTAGCAC
TGTTGGCAGATATCACCAGCAAGTACCGTCCAGGCGAAAGCAAAGGACAGATTAGCGAAGATGA
CTGTGCATCTGACCCCATAAGCAAACAGGTAGAAGGTATTGAAATTGTGGAACTTCAGCTGTCA
CATGTGAAGGACTTGTTCCATTGTGAGAAATGTAACCGTTCGTTTAAATTGTTTTACCATTTTA
AGGAACACATGAAATCACACTCCACTGAGAGTTTCAAGTGTGAAATATGCAATAAAAGGTATCT
TCGAGAGAGTGCATGGAAACACCACCTAAACTGTTACCACCTTGAAGAAGGTGGAGTAAGTAAG
AAGCAAAGAACTGGGAAAAAAATTCACACATGCCAGTATTGTGAGAAACAGTTTGACCACTTTG
GACACTTTAAAGAACACCTTCGAAAACATACAGGTGAAAAACCTTTTGAATGTTCAAATTGTCA
CGAGCGGTTTGCTAGAAATAGCACTCTCAAATGTCACCTCACTGCGTGCCAAACTGGAGTAGGG
GCAAAAAAGGGAAGGAAGAAGCTTTATGAATGCCAGGTCTGTAACAGTGTATTTAACAGCTGGG
ACCAGTTCAAAGATCACTTGGTAATACACACTGGAGATAAACCCAACCATTGTACTCTGTGTGA
CTTGTGGTTTATGCAAGGAAATGAATTAAGGAGGCATCTTAGTGATGCTCACAATATTTCAGAG
CGTATAGTGACTGAAGAAGTCCTTTCAGTAGAAACACACTTACAAACGGAACCAGTGACATCAA
TGACTATTATAGAACAAGTTGGGAAAGTGCATGTGTTACCATTGCTTCAGGTCCAAGTGGATTC
TGCACAAGTAACTGTGGAACAAGTTCATCCAGATCTGCTCCAAGACGGCCAAGTGCATGACTCA
CAAATGAGTGCGCTTCCAGAGCAGGTCCAGGTGAGTTACCTGGAGGTGGGTCGGATCCAGACTG
AAGAAGGTACTGAAGTACACGTTGAAGAGCTTCACGTCGAACGGGTCAATCAGATGCCAGTGGA
AGTACAAACTGAGCTTCTAGAAGCTGACTTGGATCACATGACCCCCGAAATGATGAGCCAAGAG
GAGAGCGAACCTAACCATGCAGATGCTGCCATGGAAGAGTACGAAGACACTGAGGGCTTGGAGA
CCAAACCAGGAGAGCACTCCCACGCTGTAAAAGTGGACCACGACAGGACATCTATGCCCGTTTT
AGAATGAAATAGCAGTGATATTTCTAAATTTACATTTGGGGTAAACTGATGGGCAGTGTGATCG
TAAGCTATCAAATAAGTGGACCAAAGTTAAGCTATTTCTGTTGTGCTGAACTGTTTCTATGGAA
ACAGGCTGATGTCCTTCCAGTTAATGCCACAGAGTGGGAATATTCCTCATAATGAGTGGGAGCT
TTGAGAAGTATATTTCTGGTAACTTAAATGAATTATATTCTTATTATATAGTTGGGTCCGAATG
CATCTATTTTCATTGTGGTAAGGGTCTCCGTGTCCTCTTCCCCAGGTCATGTCTCTCCTTAAAT
TCTTTGCATATTATAAAATCATACTTAAAACCATTAGAATACATACATTTGTATTCTAATGCAT
GTTTAAAAATTGAGTATGTAGGCAACACAAGGCTGCATGAGGGAAGTGCATTGTTACTGTGCAG
TTAATAGTTGGGGGCTAGCTTTAATTCGAACAACATTCTTGTCTAACTAGTGGCTACAAATGCT
GTCCCCACAACAGAAACGGTGGTGGCAGAATTTCTAGAATGTTAAAAAAAAAAAAAAAAAAAAA
CCACCCTGTGCCTTTTCAAAAACCAACAAAACTTCAGAAAAACATCTCTGGTTCTTTCAAAGTT
TGTGTTTTAAAGAGCAGCATAAAGTGCTCTGGTACTTGGTATTTTTGCTTAAAATGACAATTAC
CAATTCATTTTCCTTTAAGTTACATTGAAAATTTTTCATTTAACGGCGGCTAAAGGGCCATTTT
CAATGGAAAAAATTCATTTCCATCTGTGGTAAACTTTATTTTGATGAGAACTTGCACTAGTATT
TTACCACCAGATGGGAAAAGATTAGCTGAGCATCATTTTAAAATTAATGTATTTAAATAAAGTA
CAGAGGAAACGTATGTATATAATATATCAGGCTTTGTTTTGAGTGGACTCTTTTCCCCCCAATC
CTTAATGTAAAGATTTTGTGCTATAACTTTTAAAGCCATACAAATAAGAGTGCTAAACTGTGGA
CTTAAAAGTAGTTGTGTAAATATTTTTAATCAGTATTACTTGGAAAATAAAAATATAACAACCA
CATAAAATCAATATGCTATTTTCTTTACCTGTTAAATACTGGGAGATAATTTACATTTTAAAGT
AAACTTTAAAATTATGTGTTCATGACTCTTTTTAAAGTTATTTAATTTTATGTGTGTGGGTGTT
GTGCTTGTATGTATGACTGCGCACCGTGTGTGCCTGATGACTCCCTCCCCTAACACAGAAGGTG
CTTAGAGTCGGTTGTGAGCTGCCATGCGGGTGCTGAGAAGCAAACCTGGGTCCCCAGAAAGAAG
AGCCATCGCTGGCCTCGCTAATGATCAGTTTGGAGATGCTTGATATATTTTTGTGACTGTGGTA
AACATGGCTCATTAAGATACAAGATTGTTGTCACATACTTCCTAACCCAAGACTTGCTCGGAAG
GCCAGACACACGTTACTTATATCTTTGTAGATCTTATTGACATACAAGTGTTTTTAGTAGTGCC
TATTTATTTTAAACATATTTTTCTACTTGTTTTTAAAGAGATCAGCTCAAGCAATACTTTGGTA
ATTGTGGAATTAAATGGTAACAAGTCACAAAAGTTTGCTGAAGAGGTGTCAGTTTAATATTAAG
ATCATGCTTACAAAGATCACA

hide sequence

RefSeq Acc Id:

XM_008760772 ⟹ XP_008758994

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	51,725,191 - 51,752,620 (-)	NCBI
Rnor_6.0	2	52,503,693 - 52,531,521 (-)	NCBI

Sequence:

show sequence

GGAGAGGAGGGAGGGCGCCGGAGGGAGAGGCGACCCGGGGAGTCGTTGTGGGCCGCGGGCCGGA
TCGGGGCTGGGGCTGCGGCAGCCTGAGCCGGGCGGAAGTCTTGGCGGGCCGTTGGGAGGCCGCC
GAGGCTGTTCGGGGTCCTCCCCGGCCGGACTTGCGCTCCCGGGCGCCCTGAGCCTCCGGCACTG
TGCCCACCCCGCTCCAGCTCGCGTCTCCAGACTCCAATTAGGTCAGGCTCGCAGTCCCGCGGCC
GCGGCTCCGGCCCGCGACGCGCGGCGGCCGCTCGGCTCGCCTTTCTTCTTCCCCAGCCTTGCTC
TCGGCCTCCCCCTCCCCCTTCTTCCCCGGTTCCTGGGTTTTGTTTTGTTTCTGCTTGTAGGGGT
TTTGTGTCAACCCGAGCTCATGGGTGTACATTATCATGCTCCTCTTTTGTAGAGCACCCCGACG
GCCATGGAGGCTGAAGAAACGATGGAATGCCTTCAGGAGTTTCCTGAACATCATAAAATGATCT
TGGACCGATTGAATGAACAACGGGAGCAGGACCGGTTTACGGACATCACCCTGATTGTTGACGG
ACACCATTTTAAGGCACACAAGGCTGTTCTGGCTGCCTGCAGTAAGTTCTTCTACAAATTCTTT
CAGGAGTTCACTCAAGAACCTTTGGTTGAAATTGAAGGTGTTAGTAAAATGGCTTTTCGACACT
TAATTGAGTTCACATACACAGCAAAGCTAATGATACAAGGGGAAGAAGAAGCCAATGATGTGTG
GAAAGCAGCAGAGTTTCTACAAATGCTGGAAGCTATTAAAGCACTTGAAGTCAGGAACAAAGAA
AACTCAGCTCCATTAGAGGAAACTACTACAGGAAAAAATGAGGCAAAAAAAAGAAAGATCGCAG
AAACTTCCAATGTTATCACCGAGTCCTTGCCATCTGCAGAATCAGAACCTGTGGAAATCGAGGT
GGAGATTGCTGAAGGCACAATTGAAGTAGAAGACGAAGGCATTGCAGCTTTGGAGGAAATGGCT
TCTGGCAAGCAGTCTATAAAGTACATACAGAGCACAGGCTCCTCCGATGACTCTGCTCTAGCAC
TGTTGGCAGATATCACCAGCAAGTACCGTCCAGGCGAAAGCAAAGGACAGATTAGCGAAGATGA
CTGTGCATCTGACCCCATAAGCAAACAGGAACACATGAAATCACACTCCACTGAGAGTTTCAAG
TGTGAAATATGCAATAAAAGGTATCTTCGAGAGAGTGCATGGAAACACCACCTAAACTGTTACC
ACCTTGAAGAAGGTGGAGTAAGTAAGAAGCAAAGAACTGGGAAAAAAATTCACACATGCCAGTA
TTGTGAGAAACAGTTTGACCACTTTGGACACTTTAAAGAACACCTTCGAAAACATACAGGTGAA
AAACCTTTTGAATGTTCAAATTGTCACGAGCGGTTTGCTAGAAATAGCACTCTCAAATGTCACC
TCACTGCGTGCCAAACTGGAGTAGGGGCAAAAAAGGGAAGGAAGAAGCTTTATGAATGCCAGGT
CTGTAACAGTGTATTTAACAGCTGGGACCAGTTCAAAGATCACTTGGTAATACACACTGGAGAT
AAACCCAACCATTGTACTCTGTGTGACTTGTGGTTTATGCAAGGAAATGAATTAAGGAGGCATC
TTAGTGATGCTCACAATATTTCAGAGCGTATAGTGACTGAAGAAGTCCTTTCAGTAGAAACACA
CTTACAAACGGAACCAGTGACATCAATGACTATTATAGAACAAGTTGGGAAAGTGCATGTGTTA
CCATTGCTTCAGGTCCAAGTGGATTCTGCACAAGTAACTGTGGAACAAGTTCATCCAGATCTGC
TCCAAGACGGCCAAGTGCATGACTCACAAATGAGTGCGCTTCCAGAGCAGGTCCAGGTGAGTTA
CCTGGAGGTGGGTCGGATCCAGACTGAAGAAGGTACTGAAGTACACGTTGAAGAGCTTCACGTC
GAACGGGTCAATCAGATGCCAGTGGAAGTACAAACTGAGCTTCTAGAAGCTGACTTGGATCACA
TGACCCCCGAAATGATGAGCCAAGAGGAGAGCGAACCTAACCATGCAGATGCTGCCATGGAAGA
GTACGAAGACACTGAGGGCTTGGAGACCAAACCAGGAGAGCACTCCCACGCTGTAAAAGTGGAC
CACGACAGGACATCTATGCCCGTTTTAGAATGAAATAGCAGTGATATTTCTAAATTTACATTTG
GGGTAAACTGATGGGCAGTGTGATCGTAAGCTATCAAATAAGTGGACCAAAGTTAAGCTATTTC
TGTTGTGCTGAACTGTTTCTATGGAAACAGGCTGATGTCCTTCCAGTTAATGCCACAGAGTGGG
AATATTCCTCATAATGAGTGGGAGCTTTGAGAAGTATATTTCTGGTAACTTAAATGAATTATAT
TCTTATTATATAGTTGGGTCCGAATGCATCTATTTTCATTGTGGTAAGGGTCTCCGTGTCCTCT
TCCCCAGGTCATGTCTCTCCTTAAATTCTTTGCATATTATAAAATCATACTTAAAACCATTAGA
ATACATACATTTGTATTCTAATGCATGTTTAAAAATTGAGTATGTAGGCAACACAAGGCTGCAT
GAGGGAAGTGCATTGTTACTGTGCAGTTAATAGTTGGGGGCTAGCTTTAATTCGAACAACATTC
TTGTCTAACTAGTGGCTACAAATGCTGTCCCCACAACAGAAACGGTGGTGGCAGAATTTCTAGA
ATGTTAAAAAAAAAAAAAAAAAAAAACCACCCTGTGCCTTTTCAAAAACCAACAAAACTTCAGA
AAAACATCTCTGGTTCTTTCAAAGTTTGTGTTTTAAAGAGCAGCATAAAGTGCTCTGGTACTTG
GTATTTTTGCTTAAAATGACAATTACCAATTCATTTTCCTTTAAGTTACATTGAAAATTTTTCA
TTTAACGGCGGCTAAAGGGCCATTTTCAATGGAAAAAATTCATTTCCATCTGTGGTAAACTTTA
TTTTGATGAGAACTTGCACTAGTATTTTACCACCAGATGGGAAAAGATTAGCTGAGCATCATTT
TAAAATTAATGTATTTAAATAAAGTACAGAGGAAACGTATGTATATAATATATCAGGCTTTGTT
TTGAGTGGACTCTTTTCCCCCCAATCCTTAATGTAAAGATTTTGTGCTATAACTTTTAAAGCCA
TACAAATAAGAGTGCTAAACTGTGGACTTAAAAGTAGTTGTGTAAATATTTTTAATCAGTATTA
CTTGGAAAATAAAAATATAACAACCACATAAAATCAATATGCTATTTTCTTTACCTGTTAAATA
CTGGGAGATAATTTACATTTTAAAGTAAACTTTAAAATTATGTGTTCATGA

hide sequence

RefSeq Acc Id:

XM_039102252 ⟹ XP_038958180

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	51,725,191 - 51,753,662 (-)	NCBI

RefSeq Acc Id:

XM_039102253 ⟹ XP_038958181

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	51,722,774 - 51,736,400 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001094168	(Get FASTA)	NCBI Sequence Viewer
	XP_006232022	(Get FASTA)	NCBI Sequence Viewer
	XP_006232023	(Get FASTA)	NCBI Sequence Viewer
	XP_006232024	(Get FASTA)	NCBI Sequence Viewer
	XP_006232025	(Get FASTA)	NCBI Sequence Viewer
	XP_006232027	(Get FASTA)	NCBI Sequence Viewer
	XP_008758994	(Get FASTA)	NCBI Sequence Viewer
	XP_038958180	(Get FASTA)	NCBI Sequence Viewer
	XP_038958181	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH98842	(Get FASTA)	NCBI Sequence Viewer
	AAI61974	(Get FASTA)	NCBI Sequence Viewer
	EDM10429	(Get FASTA)	NCBI Sequence Viewer
	EDM10430	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000021608
	ENSRNOP00000021608.4
	ENSRNOP00000070103
	ENSRNOP00000070103.1
	ENSRNOP00000086042.1
	ENSRNOP00000089583.1

RefSeq Acc Id:

NP_001094168 ⟸ NM_001100698

- UniProtKB:

B1WC22 (UniProtKB/TrEMBL), F7FPM3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFYKFFQ
EFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKALEVRNKEN
SAPLEETTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVEDEGIAALEEMAS
GKQSIKYIQSTGSSDDSALALLADITSKYRPGESKGQISEDDCASDPISKQVEGIEIVELQLSH
VKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEICNKRYLRESAWKHHLNCYHLEEGGVSKK
QRTGKKIHTCQYCEKQFDHFGHFKEHLRKHTGEKPFECSNCHERFARNSTLKCHLTACQTGVGA
KKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPNHCTLCDLWFMQGNELRRHLSDAHNISER
IVTEEVLSVETHLQTEPVTSMTIIEQVGKVHVLPLLQVQVDSAQVTVEQVHPDLLQDGQVHDSQ
MSALPEQVQVSYLEVGRIQTEEGTEVHVEELHVERVNQMPVEVQTELLEADLDHMTPEMMSQEE
SEPNHADAAMEEYEDTEGLETKPGEHSHAVKVDHDRTSMPVLE

hide sequence

RefSeq Acc Id:	XP_006232022 ⟸ XM_006231960
- Peptide Label:	isoform X1
- UniProtKB:	B1WC22 (UniProtKB/TrEMBL), F7FPM3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFYKFFQ EFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKALEVRNKEN SAPLEETTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVEDEGIAALEEMAS GKQSIKYIQSTGSSDDSALALLADITSKYRPGESKGQISEDDCASDPISKQVEGIEIVELQLSH VKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEICNKRYLRESAWKHHLNCYHLEEGGVSKK QRTGKKIHTCQYCEKQFDHFGHFKEHLRKHTGEKPFECSNCHERFARNSTLKCHLTACQTGVGA KKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPNHCTLCDLWFMQGNELRRHLSDAHNISER IVTEEVLSVETHLQTEPVTSMTIIEQVGKVHVLPLLQVQVDSAQVTVEQVHPDLLQDGQVHDSQ MSALPEQVQVSYLEVGRIQTEEGTEVHVEELHVERVNQMPVEVQTELLEADLDHMTPEMMSQEE SEPNHADAAMEEYEDTEGLETKPGEHSHAVKVDHDRTSMPVLE hide sequence

RefSeq Acc Id:	XP_006232025 ⟸ XM_006231963
- Peptide Label:	isoform X1
- UniProtKB:	B1WC22 (UniProtKB/TrEMBL), F7FPM3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFYKFFQ EFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKALEVRNKEN SAPLEETTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVEDEGIAALEEMAS GKQSIKYIQSTGSSDDSALALLADITSKYRPGESKGQISEDDCASDPISKQVEGIEIVELQLSH VKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEICNKRYLRESAWKHHLNCYHLEEGGVSKK QRTGKKIHTCQYCEKQFDHFGHFKEHLRKHTGEKPFECSNCHERFARNSTLKCHLTACQTGVGA KKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPNHCTLCDLWFMQGNELRRHLSDAHNISER IVTEEVLSVETHLQTEPVTSMTIIEQVGKVHVLPLLQVQVDSAQVTVEQVHPDLLQDGQVHDSQ MSALPEQVQVSYLEVGRIQTEEGTEVHVEELHVERVNQMPVEVQTELLEADLDHMTPEMMSQEE SEPNHADAAMEEYEDTEGLETKPGEHSHAVKVDHDRTSMPVLE hide sequence

RefSeq Acc Id:	XP_006232024 ⟸ XM_006231962
- Peptide Label:	isoform X1
- UniProtKB:	B1WC22 (UniProtKB/TrEMBL), F7FPM3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFYKFFQ EFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKALEVRNKEN SAPLEETTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVEDEGIAALEEMAS GKQSIKYIQSTGSSDDSALALLADITSKYRPGESKGQISEDDCASDPISKQVEGIEIVELQLSH VKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEICNKRYLRESAWKHHLNCYHLEEGGVSKK QRTGKKIHTCQYCEKQFDHFGHFKEHLRKHTGEKPFECSNCHERFARNSTLKCHLTACQTGVGA KKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPNHCTLCDLWFMQGNELRRHLSDAHNISER IVTEEVLSVETHLQTEPVTSMTIIEQVGKVHVLPLLQVQVDSAQVTVEQVHPDLLQDGQVHDSQ MSALPEQVQVSYLEVGRIQTEEGTEVHVEELHVERVNQMPVEVQTELLEADLDHMTPEMMSQEE SEPNHADAAMEEYEDTEGLETKPGEHSHAVKVDHDRTSMPVLE hide sequence

RefSeq Acc Id:	XP_006232023 ⟸ XM_006231961
- Peptide Label:	isoform X1
- UniProtKB:	B1WC22 (UniProtKB/TrEMBL), F7FPM3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFYKFFQ EFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKALEVRNKEN SAPLEETTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVEDEGIAALEEMAS GKQSIKYIQSTGSSDDSALALLADITSKYRPGESKGQISEDDCASDPISKQVEGIEIVELQLSH VKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEICNKRYLRESAWKHHLNCYHLEEGGVSKK QRTGKKIHTCQYCEKQFDHFGHFKEHLRKHTGEKPFECSNCHERFARNSTLKCHLTACQTGVGA KKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPNHCTLCDLWFMQGNELRRHLSDAHNISER IVTEEVLSVETHLQTEPVTSMTIIEQVGKVHVLPLLQVQVDSAQVTVEQVHPDLLQDGQVHDSQ MSALPEQVQVSYLEVGRIQTEEGTEVHVEELHVERVNQMPVEVQTELLEADLDHMTPEMMSQEE SEPNHADAAMEEYEDTEGLETKPGEHSHAVKVDHDRTSMPVLE hide sequence

RefSeq Acc Id:

XP_006232027 ⟸ XM_006231965

- Peptide Label:

isoform X3

- Sequence:

show sequence

MIPLWGQLNLMTNLPYSDFWTRRRNKENSAPLEETTTGKNEAKKRKIAETSNVITESLPSAESE
PVEIEVEIAEGTIEVEDEGIAALEEMASGKQSIKYIQSTGSSDDSALALLADITSKYRPGESKG
QISEDDCASDPISKQVEGIEIVELQLSHVKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEI
CNKRYLRESAWKHHLNCYHLEEGGVSKKQRTGKKIHTCQYCEKQFDHFGHFKEHLRKHTGEKPF
ECSNCHERFARNSTLKCHLTACQTGVGAKKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPN
HCTLCDLWFMQGNELRRHLSDAHNISERIVTEEVLSVETHLQTEPVTSMTIIEQVGKVHVLPLL
QVQVDSAQVTVEQVHPDLLQDGQVHDSQMSALPEQVQVSYLEVGRIQTEEGTEVHVEELHVERV
NQMPVEVQTELLEADLDHMTPEMMSQEESEPNHADAAMEEYEDTEGLETKPGEHSHAVKVDHDR
TSMPVLE

hide sequence

RefSeq Acc Id:	XP_008758994 ⟸ XM_008760772
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2JX21 (UniProtKB/TrEMBL), A6I5X1 (UniProtKB/TrEMBL), A0A8I6AC93 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFYKFFQ EFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKALEVRNKEN SAPLEETTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVEDEGIAALEEMAS GKQSIKYIQSTGSSDDSALALLADITSKYRPGESKGQISEDDCASDPISKQEHMKSHSTESFKC EICNKRYLRESAWKHHLNCYHLEEGGVSKKQRTGKKIHTCQYCEKQFDHFGHFKEHLRKHTGEK PFECSNCHERFARNSTLKCHLTACQTGVGAKKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDK PNHCTLCDLWFMQGNELRRHLSDAHNISERIVTEEVLSVETHLQTEPVTSMTIIEQVGKVHVLP LLQVQVDSAQVTVEQVHPDLLQDGQVHDSQMSALPEQVQVSYLEVGRIQTEEGTEVHVEELHVE RVNQMPVEVQTELLEADLDHMTPEMMSQEESEPNHADAAMEEYEDTEGLETKPGEHSHAVKVDH DRTSMPVLE hide sequence

RefSeq Acc Id:

ENSRNOP00000021608 ⟸ ENSRNOT00000021608

RefSeq Acc Id:

ENSRNOP00000070103 ⟸ ENSRNOT00000089303

RefSeq Acc Id:	XP_038958181 ⟸ XM_039102253
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038958180 ⟸ XM_039102252
- Peptide Label:	isoform X4

RefSeq Acc Id:

ENSRNOP00000086042 ⟸ ENSRNOT00000107342

RefSeq Acc Id:

ENSRNOP00000089583 ⟸ ENSRNOT00000104695

Protein Domains

BTB C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B1WC22-F1-model_v2	AlphaFold	B1WC22	1-619	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13691159

Promoter ID:

EPDNEW_R1684

Type:

single initiation site

Name:

Zfp131_1

Description:

zinc finger protein 131

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	2	52,531,096 - 52,531,156	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307638	AgrOrtholog
BioCyc Gene	G2FUF-54272	BioCyc
Ensembl Genes	ENSRNOG00000015925	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000021608	ENTREZGENE
	ENSRNOT00000021608.7	UniProtKB/TrEMBL
	ENSRNOT00000089303	ENTREZGENE
	ENSRNOT00000089303.2	UniProtKB/TrEMBL
	ENSRNOT00000104695.1	UniProtKB/TrEMBL
	ENSRNOT00000107342.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7379163	IMAGE-MGC_LOAD
	IMAGE:9029363	IMAGE-MGC_LOAD
InterPro	BTB/POZ-like	UniProtKB/TrEMBL
	BTB/POZ_fold	UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
KEGG Report	rno:310375	UniProtKB/TrEMBL
MGC_CLONE	MGC:112898	IMAGE-MGC_LOAD
	MGC:187784	IMAGE-MGC_LOAD
NCBI Gene	310375	ENTREZGENE
PANTHER	AGAP004733-PA	UniProtKB/TrEMBL
	AGAP004733-PA	UniProtKB/TrEMBL
	ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 47	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
Pfam	BTB	UniProtKB/TrEMBL
	zf-met	UniProtKB/TrEMBL
PhenoGen	Zfp131	PhenoGen
PROSITE	BTB	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000015925	RatGTEx
SMART	BTB	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	BTB/POZ_fold	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0A0G2JX21	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A0G9_RAT	UniProtKB/TrEMBL
	A0A8I6AC93	ENTREZGENE, UniProtKB/TrEMBL
	A6I5X1	ENTREZGENE, UniProtKB/TrEMBL
	B1WC22	ENTREZGENE, UniProtKB/TrEMBL
	F7FPM3	ENTREZGENE, UniProtKB/TrEMBL
	Q4G013_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Zfp131	zinc finger protein 131	Zfp131_predicted	zinc finger protein 131 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Zfp131_predicted	zinc finger protein 131 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar