Zfp516 (zinc finger protein 516) - Rat Genome Database

Name: Zfp516
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Zfp516 (zinc finger protein 516) Rattus norvegicus

Analyze

Symbol:

Zfp516

Name:

zinc finger protein 516

RGD ID:

1306817

Description:

Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; DNA-binding transcription factor binding activity; and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including adipose tissue development; brown fat cell differentiation; and positive regulation of cold-induced thermogenesis. Predicted to be active in nucleus. Orthologous to human ZNF516 (zinc finger protein 516); INTERACTS WITH atrazine; bisphenol A; Cuprizon.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC291406; RGD1306817; similar to Hypothetical zinc finger protein KIAA0222; Znf516

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZNF516 (zinc finger protein 516)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Zfp516 (zinc finger protein 516)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Znf516 (zinc finger protein 516)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZNF516 (zinc finger protein 516)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZNF516 (zinc finger protein 516)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Znf516 (zinc finger protein 516)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZNF516 (zinc finger protein 516)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZNF516 (zinc finger protein 516)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Znf516 (zinc finger protein 516)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ZNF516 (zinc finger protein 516)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Zfp516 (zinc finger protein 516)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	znf516 (zinc finger protein 516)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	18	76,286,453 - 76,386,526 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	76,302,096 - 76,385,269 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	78,445,002 - 78,485,067 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	79,117,046 - 79,157,114 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	76,959,667 - 76,999,739 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	79,768,387 - 79,857,909 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	79,773,608 - 79,854,192 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	78,822,814 - 78,923,250 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	79,445,606 - 79,486,105 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	79,518,878 - 79,559,768 (+)	NCBI
Celera	18	74,973,350 - 75,013,499 (+)	NCBI		Celera
Cytogenetic Map	18	q12.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Burn-McKeown syndrome (ISO)

chromosome 18q deletion syndrome (ISO)

genetic disease (ISO)

intellectual disability (ISO)

intestinal volvulus (ISO)

Neurodevelopmental Disorders (ISO)

Oculootofacial Dysplasia (ISO)

pulmonary valve stenosis (ISO)

Volvulus Of Midgut (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-hydroxypropanoic acid (ISO)

3,4-methylenedioxymethamphetamine (ISO)

Aflatoxin B2 alpha (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

caffeine (ISO)

chlorpyrifos (ISO)

copper(II) sulfate (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

ethanol (ISO)

gentamycin (EXP)

glyphosate (EXP,ISO)

leflunomide (ISO)

lipopolysaccharide (ISO)

methoxychlor (EXP)

paracetamol (EXP)

potassium chromate (ISO)

rac-lactic acid (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sodium arsenite (ISO)

tetrachloromethane (EXP)

trichostatin A (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adipose tissue development (ISO)

brown fat cell differentiation (ISO)

positive regulation of cold-induced thermogenesis (ISO,ISS)

positive regulation of DNA-templated transcription (ISO)

regulation of DNA-templated transcription (IBA)

regulation of transcription by RNA polymerase II (IEA)

response to cold (ISO)

Cellular Component

nucleus (IBA,ISO)

Molecular Function

cis-regulatory region sequence-specific DNA binding (ISO)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

DNA-binding transcription factor binding (ISO)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Cold-inducible Zfp516 activates UCP1 transcription to promote browning of white fat and development of brown fat.	Dempersmier J, etal., Mol Cell. 2015 Jan 22;57(2):235-46. doi: 10.1016/j.molcel.2014.12.005. Epub 2015 Jan 8.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Zfp516
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	18	76,286,453 - 76,386,526 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	76,302,096 - 76,385,269 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	78,445,002 - 78,485,067 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	79,117,046 - 79,157,114 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	76,959,667 - 76,999,739 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	79,768,387 - 79,857,909 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	79,773,608 - 79,854,192 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	78,822,814 - 78,923,250 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	79,445,606 - 79,486,105 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	79,518,878 - 79,559,768 (+)	NCBI
Celera	18	74,973,350 - 75,013,499 (+)	NCBI		Celera
Cytogenetic Map	18	q12.3	NCBI

ZNF516
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	76,357,682 - 76,496,419 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	76,357,682 - 76,495,242 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	74,069,637 - 74,207,198 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	72,200,607 - 72,304,045 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	18	70,889,374 - 71,024,478 (-)	NCBI		Celera
Cytogenetic Map	18	q23	NCBI
HuRef	18	70,754,762 - 70,858,708 (-)	NCBI		HuRef
CHM1_1	18	74,064,875 - 74,202,365 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	18	76,587,498 - 76,725,258 (-)	NCBI		T2T-CHM13v2.0

Zfp516
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	82,925,324 - 83,023,439 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	82,928,788 - 83,023,439 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	82,909,688 - 83,005,314 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	82,910,663 - 83,005,314 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	83,080,271 - 83,174,706 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	83,090,047 - 83,137,151 (+)	NCBI		MGSCv36	mm8
Celera	18	83,980,281 - 84,075,429 (+)	NCBI		Celera
Cytogenetic Map	18	E3	NCBI
cM Map	18	57.39	NCBI

Znf516
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	59,752,106 - 59,874,743 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	59,750,682 - 59,874,987 (-)	NCBI	ChiLan1.0	ChiLan1.0

ZNF516
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	18	79,594,361 - 79,736,622 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	69,748,472 - 69,891,026 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	73,021,762 - 73,150,904 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	73,026,076 - 73,103,609 (-)	Ensembl	panpan1.1		panPan2

ZNF516
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	3,275,255 - 3,400,761 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	3,274,993 - 3,492,201 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	4,281,756 - 4,406,341 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	3,081,681 - 3,206,321 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	3,115,169 - 3,249,626 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	3,126,590 - 3,251,107 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	3,077,152 - 3,201,792 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	3,247,353 - 3,371,947 (+)	NCBI		UU_Cfam_GSD_1.0

Znf516
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	17,128,032 - 17,232,559 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936616	2,452,248 - 2,553,693 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936616	2,451,952 - 2,553,843 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF516
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	147,984,481 - 148,087,719 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	147,987,660 - 148,100,788 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	163,849,431 - 163,946,769 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF516
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	3,449,624 - 3,588,105 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	3,504,027 - 3,583,816 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666060	22,351,429 - 22,489,546 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf516
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624806	4,153,663 - 4,213,110 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624806	4,103,811 - 4,223,294 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Zfp516
534 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	117
Count of miRNA genes:	97
Interacting mature miRNAs:	102
Transcripts:	ENSRNOT00000021768
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578661	Bss20	Bone structure and strength QTL 20	3.7		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	18	11791518	83218561	Rat
1578667	Bss21	Bone structure and strength QTL 21	3.5		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	18	11791518	83218561	Rat
1600373	Mamtr6	Mammary tumor resistance QTL 6			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	18	19278901	83218561	Rat
1331741	Bp232	Blood pressure QTL 232	3.59112		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	21372893	83213037	Rat
1331733	Bp233	Blood pressure QTL 233	3.97196		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	24796977	79788953	Rat
2303120	Mamtr8	Mammary tumor resistance QTL 8		0.001	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	18	31359408	83218561	Rat
631274	Sprol1	Serum protein level QTL 1	5.3		blood total protein amount (VT:0005567)	serum total protein level (CMO:0000661)	18	31393320	77209694	Rat
631518	Bw11	Body weight QTL 11	2.8		body mass (VT:0001259)	body weight (CMO:0000012)	18	35870723	80870723	Rat
61367	Iddm4	Insulin dependent diabetes mellitus QTL 4	2.33	0.0074	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	18	38192455	83192455	Rat
1598826	Anxrr20	Anxiety related response QTL 20	3.04		body movement coordination trait (VT:0005424)	number of rearing movements in an experimental apparatus (CMO:0001752)	18	41432971	83828827	Rat
6893683	Bw110	Body weight QTL 110	2.7	0.002	body mass (VT:0001259)	body weight (CMO:0000012)	18	43345022	83828827	Rat
8694366	Abfw8	Abdominal fat weight QTL 8	6.38	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	18	46640675	83828827	Rat
8694432	Bw165	Body weight QTL 165	3.81	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	18	46640675	83828827	Rat
9589041	Epfw12	Epididymal fat weight QTL 12	17.08	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	18	46640675	83828827	Rat
2303571	Bw92	Body weight QTL 92	3		body mass (VT:0001259)	body weight (CMO:0000012)	18	48520044	83828827	Rat
2303584	Gluco55	Glucose level QTL 55	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	18	48520044	83828827	Rat
738008	Hcar14	Hepatocarcinoma resistance QTL 14	4.3		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion number (CMO:0001462)	18	51464733	83218561	Rat
1298072	Cia26	Collagen induced arthritis QTL 26	3.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	18	54709769	83828827	Rat
724542	Kidm2	Kidney mass QTL 2	2.6		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	18	59172115	83828827	Rat
2301969	Bp324	Blood pressure QTL 324	4.05		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	59712417	76477814	Rat
70185	BpQTLcluster15	Blood pressure QTL cluster 15	4.61		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	59712417	76477814	Rat
70185	BpQTLcluster15	Blood pressure QTL cluster 15	4.61		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	59712417	76477814	Rat
70185	BpQTLcluster15	Blood pressure QTL cluster 15	4.61		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	18	59712417	76477814	Rat
70185	BpQTLcluster15	Blood pressure QTL cluster 15	4.61		arterial blood pressure trait (VT:2000000)	absolute change in systolic blood pressure (CMO:0000607)	18	59712417	76477814	Rat
6903353	Bp353	Blood pressure QTL 353	2.8		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	59796478	83828827	Rat
6903356	Bp354	Blood pressure QTL 354	4.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	59796478	83828827	Rat
61384	Bp48	Blood pressure QTL 48	19.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	60622311	77209844	Rat
631675	Iddm15	Insulin dependent diabetes mellitus QTL 15			urine glucose amount (VT:0001758)	percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)	18	60622311	77209844	Rat
634333	Pia19	Pristane induced arthritis QTL 19	3.4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	18	73997140	79532029	Rat

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium		20	6	4	2	4			31	20	39	8
Low	3	22	50	36	17	36	8	11	43	15	2	3	8
Below cutoff		1	1	1		1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001412457	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772100	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600868	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600871	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000021768 ⟹ ENSRNOP00000021768

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	76,302,096 - 76,385,269 (+)	Ensembl
Rnor_6.0 Ensembl	18	79,813,759 - 79,853,866 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000088484 ⟹ ENSRNOP00000072097

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	76,302,096 - 76,385,269 (+)	Ensembl
Rnor_6.0 Ensembl	18	79,773,608 - 79,854,192 (+)	Ensembl

RefSeq Acc Id:

NM_001191695 ⟹ NP_001178624

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	76,298,823 - 76,386,526 (+)	NCBI
Rnor_6.0	18	79,813,759 - 79,853,866 (+)	NCBI
Rnor_5.0	18	78,822,814 - 78,923,250 (+)	NCBI
Celera	18	74,973,350 - 75,013,499 (+)	NCBI

Sequence:

show sequence

ATGGATCGCAGCAGAGAGGCTGAGATGGAGCTGAGGAGAGGACCCAGCCCACCCAGGGCTGGCA
GGAGCCACGAAGTGGACGGGGACAAGGCCGCCTGCCACAGCTGTTGCATCTGCGGCAAGAGCTT
TCCTTTCCAGAGCTCCCTGTCCCAGCATATGCGCAAGCACACAGGAGAGAAGCCCTACAAGTGT
CCCTACTGTGACCACAGGGCTTCCCAGAAGGGCAACCTCAAGATTCACATCCGCAGCCACCGGA
CGGGGACTCTGATCCAGGGGCACGAGCCAGAGGTGGGAGAGGCTCAGCTGGGAGAGCTGCGTGT
CTCCGAGGGCCTGGATGGGTGTGCCAGCCCCACCAAGAGCACCTCTGCCTGCAACCGCGTGCTG
AATGGGGCCGTGCCAACGGATGGCAGCAAGATTCTGCTCAGGAGCAGCCGCAAGGAAGCAGAGG
GCGCAGCCAGCGCCCAGGAAGACGCCGAGGCTATGGTGCAGTGCTCCTTCTGTAAGAGCCGGTT
TGAGCGTAAGAAGGACCTGGAGCTGCACGTGCACCAAGCCCACAAGCCATTCAAGTGCAGGCTG
TGCAGCTATGTCACCCTGCGGGAGGAGTCTCTGCTCAGCCACATCGAGAGGGACCACATCACTG
CACAGGTGCCCAATGGCAGCGAGGCCTGTGTGGAGAACGGCAAGCCTGAGCTGAGCCCTGGGGA
ATTTCCCTGCGAGGTGTGTGGCCAGGCCTTCAGCCAGACCTGGTTCCTGAAGGCACACATGAAG
AAACACCGCGGCTCCTTTGACCATGGCTGCCACATCTGTGGCCGGAGATTCAAAGAGCCCTGGT
TCCTCAAGAACCACATGAAGGCGCATGGACCCAAGGCAGGAAGCAAGAACAGGCCCAAGAGTGA
CCTGGACCCCATTGCTACCATCAACAACGTGGTACAGGAGGAGGTCATTGTCACCGGCCTGTCC
CTCTATGAGATCTGCACGAAGTGCGGGAACCTGTTTACAGACCTGGACAGCTTGAACGCCCACA
ACACCGTGCACCGTAAAGTTGAAGCCAGCCGGAACCCAGCCCCGGCCGAGGAAGGGGATACAGA
AGACCCCCCAGACACCAAGCAGTTCTTCTTACAGTGCCTGAACCTGACACCATGTGTGGCTGGC
GACGTGTCCCCCAGTGGGCAGGCTGGACGGCGAGTGGCAGAGTTGGACCCTGTCAACAGCTATC
AGGCCTGGCAGCTGGCCACCAGGGGGAAGGTGGCCGAGCCGGCTGAGTACCTCAAGTACGGGAC
TTGGGACGAGGCGCTGGCCGGGGATGTCGCCTTTGACAAAGACAAGCGTGAGTATATACTGGTG
AGTCAGGAGAAACGCAAGCGTGAATCGGATGCTCCTTCTACCCAGGCTCCCCCAAGGAAGAGGG
CCAGTGTACCTGGGGACCCCATGCTTTCTGGACACCTTGACCCCCGGCCAGCCTCACGCCCCAA
CCGCAGGGCTGCGGCCACCACTGGCCAGGGGAAGTCCTCTGAGTGCTTCGAGTGCGGCAAGATC
TTCCGCACCTACCACCAGATGGTGCTCCACTCCCGTGTGCACCGCCGCGCACGCCGTGACAGGG
ATCCTGAAGGGGACCGGGCAGTACGTGCCCGCTGCGGTTCACTCAGCGAGGGTGATTCGGCGTC
CCAGCCAAGCAGCCCTGGCTCAGCCTGTGCCACTGCTGACTCCCCTGGCCTGGCGGAAGAAGTG
GTGGACGATAGTGGTGAAGAGGCGGTGTCTGAACCCGCATCAGGAGGCCAACCAGGACACTGCT
GCTCTTCTGGAGAGGTGGCACCCATCCTGCTCTCCAACGGAGACCCGAGTCACAAACTTGGAAA
TAACCTGCCAGAGGAAGACATCAGCGAGCCCACGGTGGGGATCGCCACGCCGTCTGTGTCCATA
CTTGAAAACAGCAGCAGAGAGACCACCAAGGGTCCCGAGCAGCATAGACATTCCCTTGACTTAA
AGATGCCAGCATTTCACCCCAGGCAGGAAGCCAGCACGCCCGAGCGGGTAGACTTCCCCTCGAG
CATGGAAATAGCCAGCCTGCAGCACACCTTGGACAGCCAAGCTGGGCATTCGAAAGAAAAGCTG
TCCGATTTGCACAAGGAGCACTGTGGGGTAGGGAAGCGGGCATCTGCCCCTGACCTGGTCCCGT
TGGACTTGAGCATGAAGTCGAGCCGGGAAGACCCCAGCAGTAAGGAAGCCAGCTCCCTGCAGAC
CGCCCTAGTCATTCACCCGTGTCCTTACTGTAACCACAAGACCTACTACCCCGAGGTCCTGTGG
ATGCACAAGCGCATCTGGCACAGGATCAGCTGCGGCTCTATAGCCCCTCCTTGGACTCAGCCCA
GTGGCCACAAGAGCATCTGCAGCAACCTGGCTTTCCTCGCCCGCAGTGGGCGCACAGGGCCCCC
GCCTGCTCTCGGGGGCAAGGACTGCCAGCCCCTGCTCCTTGCTCGTTTTACCCGCACCCAGGTG
CCAGGTGGGGTACCAGGATCAAAGGGCAGCTCTTCTCCCCTTGGGGTGACCACAAAAGCCGCTA
GCATACCTAAGAACAAGGAGAGCCCTTCTGGGGGCCCCTGCGCTCCGTGGGCCCCTGGCCCCGA
TGGGTATCGGCAGACCAGAGCCGGCCATGGCCAGGATCCACCTAGTGCTGCAGTGCAGGGACCC
CTGCCCAAGCCCAAACAGGAGGCTAGCTCCAGGCTGGCACCTTCCCCAGGCAGTGGGGGCCTCA
GCAGAAGTGCCACCCCTACACCCTCAGTTATAACCCGTGTTGGTGCCCAGCCCTCAGCCAACAG
CAAGCCAGTGGAGAAACTCGGGGTCCCGGCAGTGGGGACTGGCTTTACCCCTCCGAATAAGCAC
AGTGCCCCAGACTCTCTGAAAGCCAAATTCAGTCCTCAGCCTCAGGGTCAGCCTCCCTCGAAAG
GTGAAGGAGGCTCTCCTCTACCTCCCCGAGAAGCCCCTGTGAAGCCGGCCCAGGAGCTGCGAAC
GCTAGCCACGTGTGCAGCAGGGCCCCGAGGGGACGCAGCCTTGCAGGCTCCGCCCGGCGCGCCT
CCCACCTTACACTCCATCCAGCAGGAGCCGGCGGCAGCCGAGGGCCAGGAGAAGCGCCTGGACA
TCCTCAGTATCTTTAAGTACATTCCAAAGGACTTCGCCACACTCTACCAGGGCTGGGGTGTCAG
CAGCCCTGGGCCTGAGCACAGAGGGACACCGCGGACACAGGCCCGCCAGGGAGACTTTGTCTGT
GTGGAGTGCGGCAAGAGTTTCCACCAGCCCAGCCAACTCAGGGCCCACCTTCGGGCACACACAG
TGGTGTTTGAGTGTGACAGTCCACGGGGTTCTGAAGTTCACACAGCCTCCACGGATACCCCTAA
ACAAGGGAGAGACCACACTGCCCCAGGGACTGTGCCGGCAGGGCCCCTCCGAAAGGGGACCTAG

hide sequence

RefSeq Acc Id:

NM_001412457 ⟹ NP_001399386

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	76,298,823 - 76,386,526 (+)	NCBI

RefSeq Acc Id:

XM_008772099 ⟹ XP_008770321

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	76,298,359 - 76,386,526 (+)	NCBI
Rnor_6.0	18	79,769,505 - 79,857,909 (+)	NCBI

Sequence:

show sequence

CGGAGGGGGGCCGGGCGCGTGGCTGGTCCCGCGCGTCCTCGCGCGTCCCCCGCGCCAGGGCGCA
GCTGGCGCGGTCGGTCTAGAGCAGCGCTCGGCACCGCGCCGCGGGCGCTCGGCTTCACCTTCAG
ATGCGCGGGGCGTGCGCGTCCTCCTCCTGGGGCCCGCCGCCTCCCCGCCAAGGTGCTTGCTGCA
TCTGCCACACCACAGAATGCACCTTCTCCTCAGAAGCACCTCTCTCCCCTCTGGGCAGCAGGAA
CCCCTCTCAAAATGAAGAGATAAGACTCTTCCGGCCCCTACGACCCAAGGCTGTGCTGTGACAC
CCACACCGCCCTAATGGATCGCAGCAGAGAGGCTGAGATGGAGCTGAGGAGAGGACCCAGCCCA
CCCAGGGCTGGCAGGAGCCACGAAGTGGACGGGGACAAGGCCGCCTGCCACAGCTGTTGCATCT
GCGGCAAGAGCTTTCCTTTCCAGAGCTCCCTGTCCCAGCATATGCGCAAGCACACAGGAGAGAA
GCCCTACAAGTGTCCCTACTGTGACCACAGGGCTTCCCAGAAGGGCAACCTCAAGATTCACATC
CGCAGCCACCGGACGGGGACTCTGATCCAGGGGCACGAGCCAGAGGTGGGAGAGGCTCAGCTGG
GAGAGCTGCGTGTCTCCGAGGGCCTGGATGGGTGTGCCAGCCCCACCAAGAGCACCTCTGCCTG
CAACCGCGTGCTGAATGGGGCCGTGCCAACGGATGGCAGCAAGATTCTGCTCAGGAGCAGCCGC
AAGGAAGCAGAGGGCGCAGCCAGCGCCCAGGAAGACGCCGAGGCTATGGTGCAGTGCTCCTTCT
GTAAGAGCCGGTTTGAGCGTAAGAAGGACCTGGAGCTGCACGTGCACCAAGCCCACAAGCCATT
CAAGTGCAGGCTGTGCAGCTATGTCACCCTGCGGGAGGAGTCTCTGCTCAGCCACATCGAGAGG
GACCACATCACTGCACAGGTGCCCAATGGCAGCGAGGCCTGTGTGGAGAACGGCAAGCCTGAGC
TGAGCCCTGGGGAATTTCCCTGCGAGGTGTGTGGCCAGGCCTTCAGCCAGACCTGGTTCCTGAA
GGCACACATGAAGAAACACCGCGGCTCCTTTGACCATGGCTGCCACATCTGTGGCCGGAGATTC
AAAGAGCCCTGGTTCCTCAAGAACCACATGAAGGCGCATGGACCCAAGGCAGGAAGCAAGAACA
GGCCCAAGAGTGACCTGGACCCCATTGCTACCATCAACAACGTGGTACAGGAGGAGGTCATTGT
CACCGGCCTGTCCCTCTATGAGATCTGCACGAAGTGCGGGAACCTGTTTACAGACCTGGACAGC
TTGAACGCCCACAACACCGTGCACCGTAAAGTTGAAGCCAGCCGGAACCCAGCCCCGGCCGAGG
AAGGGGATACAGAAGACCCCCCAGACACCAAGCAGTTCTTCTTACAGTGCCTGAACCTGACACC
ATGTGTGGCTGGCGACGTGTCCCCCAGTGGGCAGGCTGGACGGCGAGTGGCAGAGTTGGACCCT
GTCAACAGCTATCAGGCCTGGCAGCTGGCCACCAGGGGGAAGGTGGCCGAGCCGGCTGAGTACC
TCAAGTACGGGACTTGGGACGAGGCGCTGGCCGGGGATGTCGCCTTTGACAAAGACAAGCGTGA
GTATATACTGGTGAGTCAGGAGAAACGCAAGCGTGAATCGGATGCTCCTTCTACCCAGGCTCCC
CCAAGGAAGAGGGCCAGTGTACCTGGGGACCCCATGCTTTCTGGACACCTTGACCCCCGGCCAG
CCTCACGCCCCAACCGCAGGGCTGCGGCCACCACTGGCCAGGGGAAGTCCTCTGAGTGCTTCGA
GTGCGGCAAGATCTTCCGCACCTACCACCAGATGGTGCTCCACTCCCGTGTGCACCGCCGCGCA
CGCCGTGACAGGGATCCTGAAGGGGACCGGGCAGTACGTGCCCGCTGCGGTTCACTCAGCGAGG
GTGATTCGGCGTCCCAGCCAAGCAGCCCTGGCTCAGCCTGTGCCACTGCTGACTCCCCTGGCCT
GGCGGAAGAAGTGGTGGACGATAGTGGTGAAGAGGCGGTGTCTGAACCCGCATCAGGAGGCCAA
CCAGGACACTGCTGCTCTTCTGGAGAGGTGGCACCCATCCTGCTCTCCAACGGAGACCCGAGTC
ACAAACTTGGAAATAACCTGCCAGAGGAAGACATCAGCGAGCCCACGGTGGGGATCGCCACGCC
GTCTGTGTCCATACTTGAAAACAGCAGCAGAGAGACCACCAAGGGTCCCGAGCAGCATAGACAT
TCCCTTGACTTAAAGATGCCAGCATTTCACCCCAGGCAGGAAGCCAGCACGCCCGAGCGGGTAG
ACTTCCCCTCGAGCATGGAAATAGCCAGCCTGCAGCACACCTTGGACAGCCAAGCTGGGCATTC
GAAAGAAAAGCTGTCCGATTTGCACAAGGAGCACTGTGGGGTAGGGAAGCGGGCATCTGCCCCT
GACCTGGTCCCGTTGGACTTGAGCATGAAGTCGAGCCGGGAAGACCCCAGCAGTAAGGAAGCCA
GCTCCCTGCAGACCGCCCTAGTCATTCACCCGTGTCCTTACTGTAACCACAAGACCTACTACCC
CGAGGTCCTGTGGATGCACAAGCGCATCTGGCACAGGATCAGCTGCGGCTCTATAGCCCCTCCT
TGGACTCAGCCCAGTGGCCACAAGAGCATCTGCAGCAACCTGGCTTTCCTCGCCCGCAGTGGGC
GCACAGGGCCCCCGCCTGCTCTCGGGGGCAAGGACTGCCAGCCCCTGCTCCTTGCTCGTTTTAC
CCGCACCCAGGTGCCAGGTGGGGTACCAGGATCAAAGGGCAGCTCTTCTCCCCTTGGGGTGACC
ACAAAAGCCGCTAGCATACCTAAGAACAAGGAGAGCCCTTCTGGGGGCCCCTGCGCTCCGTGGG
CCCCTGGCCCCGATGGGTATCGGCAGACCAGAGCCGGCCATGGCCAGGATCCACCTAGTGCTGC
AGTGCAGGGACCCCTGCCCAAGCCCAAACAGGAGGCTAGCTCCAGGCTGGCACCTTCCCCAGGC
AGTGGGGGCCTCAGCAGAAGTGCCACCCCTACACCCTCAGTTATAACCCGTGTTGGTGCCCAGC
CCTCAGCCAACAGCAAGCCAGTGGAGAAACTCGGGGTCCCGGCAGTGGGGACTGGCTTTACCCC
TCCGAATAAGCACAGTGCCCCAGACTCTCTGAAAGCCAAATTCAGTCCTCAGCCTCAGGGTCAG
CCTCCCTCGAAAGGTGAAGGAGGCTCTCCTCTACCTCCCCGAGAAGCCCCTGTGAAGCCGGCCC
AGGAGCTGCGAACGCTAGCCACGTGTGCAGCAGGGCCCCGAGGGGACGCAGCCTTGCAGGCTCC
GCCCGGCGCGCCTCCCACCTTACACTCCATCCAGCAGGAGCCGGCGGCAGCCGAGGGCCAGGAG
AAGCGCCTGGACATCCTCAGTATCTTTAAGTACATTCCAAAGGACTTCGCCACACTCTACCAGG
GCTGGGGTGTCAGCAGCCCTGGGCCTGAGCACAGAGGGACACCGCGGACACAGGCCCGCCAGGG
AGACTTTGTCTGTGTGGAGTGCGGCAAGAGTTTCCACCAGCCCAGCCAACTCAGGGCCCACCTT
CGGGCACACACAGGGGAGAGACCACACTGCCCCAGGGACTGTGCCGGCAGGGCCCCTCCGAAAG
GGGACCTAGAGACACACCTCCAGCACCCAGCCCGTGATAGTGTTGACTGTGGCCTCACGGGTGA
TTGGAAGGCTCCCAGCAGTGACCATGGCCACTTTGGGGAAGAAGATCCAAGGTCTCCTGACCAG
ACACCTTAGACCTGAGAGCCGTTGCACCAGAGCAGACCAGGGAGATGCCTCCTTGGTAACATGT
AGGGACAGCAAAGATGCTATGCCTAGGATTCTGTGTAGCTCTTTCACACACATGTGTGTGCTCA
TCGCCCATGGCCTGTGTTTCCTCACAATAAGCAGTGGTATTGGCAGGCACAGTAGCAGCTCAAG
GAGTCTGTGTTATTCAAGACAGGCATGAGACACTGGAAAAAAGATGCTGGTGTGTTTGGATGGG
CTGGGCACTGTGGGGAGGTCCAGTGCTCAGGACAGATGATGCTGTCAGAGTGTGGGGGACGGAG
GGGTGTGCACTACTGCCTCTCCCCCTCAGTGGGGACTCACAGTAGCAATGAGAGAGAAAGAGGG
TGTTCAGGTAAGACTTGTTCGAATGCTGTGGAGATGAGCTTGGTGAGGCAGGGCGATGATAGCC
TCATGGTTAGGAGTCTGGCCACGACTCTGGGCTCTCACGCCCTCCATGCCGAGTTCTCACCATT
CGGGCTGCGTCTGGCTCAGGAAACACTGCAGAGGTGGGAACACAGAAATCTGCTTTGGAAGGAA
ACGTTAGTGAACACTAAGAGGGCAGGTGTCTTCGTTTATTCTCAGGACCTTTTTTGTAACAGGG
CTACATTCTGCAAACTGCTCACAAAAGACTAAGCCACTGAATCCTCCCACTTTGGGCCTGTTTT
AGTAATGGCAGAAGAATCCCTGAGCAGATTTGGGGCCCTAGATCATTAGGGTGCTAGTGCTTTG
GAACTTTCTCTCCCTCCCCATCCCAGCCTTTCCCTTGCACCCCCCCAGCAAATAGATGTCTTTC
CCCATTGGGCCTGGTGAGCACCACTGGACAAGTGACTCTGTTCACAGATGACTGGGGTCTCCAG
GCCTGAGGGCAAGGACGGCTTTATATACCTCTTCCTTAGTCACGCAAGTCCACGTTTCTGCGGT
GGGGTGAAGGCCCTAGCAGAGGCTCTGAGCCCACGCGACGTGCGCAGTGGGGACTGTTCGGCAG
GTAGCAGCGACTCCTCCCCCGTCCGTCGCTGTGGCACTGTGTGGTGGCGATACTTCTGCGAGTT
CCAGATGTTTGCACATGTGGTTTTATGCATTATCAAAATTACTGCTGCCTTGAATGAAACATTC
TGTGAAAGTTTTTGCAAAAGCTTTACTAGTTTTTTTTTTATTGTGAAATTTTGTAAAGGCAGGA
AATGGATTAAGACAAGCATGCTAAATATATTTTTCAGAAAAAAAGCAATAATTTTACATGTACA
GAAATTATCCTAACCTTTAATACTGGTGAGAGCGACAGTTTACTTAACCCAGCAATGGATCAGT
GCGGTTTCTGTAGGAAATGGGCTTCTGATACAAAGACTTGTTTCAACACACATGTATACATGAA
TCCTGGCGTGTGGTTTCTCTGTTCTAATGATCTGTTGGATTATTATTATTATATTATTATTATT
GTTATTGTTATTGTTAGCTGATGTTTGGTTCCAGATTCTATTTGTCACTGTTTTAATTACTTGA
CTGTTCAGGTGACTGCTGCACTTGCAAGAATGCAGTGCTAACTGGCTAGCAGATGCGTATATAT
ACATATATACGTATATATATATATGCTAACTGGCTAGCAGATGCGTATATATACATATATACAT
ATATATGTGTGTGTATATATATATACTAACTGGCTAGCAGATACGGTTATATACATATATACGT
ATATATATACTAACTGGCTAGCAGATGCGTATATATACATATATACGTATATATATATAATTAT
TTTTTTTTACTTATTTTTTCCTGATACTCCTACACCAGGTATGTATGAGAACGGTTTGCCATGC
TGAGTGCTTGGGAATATCAGTCATTCTGAGACGTACATGGAGCAGACCGCAGAGACGCATTCCT
CTCTCCTCCTGAGGCAGCGTAGTTCCTTTCTGTTGAGCTTGTCTGCTCATTATGATAGGCTCCC
CATCTGTCTGCATTTTCTGGCTTTTTGTTTCCTTGGCTGGAAGTAAAGGTGAGAGCTAGGAATG
TCAGGGCCTGTGATTCGGCCCCATCTATTCTGTGTCTTAGTTATTAAACAGTTCTGTACACAAA
GGGACACGAAGGTGTCGTTTGCGTTTTTACTGTGTCTGAAGCTGCACGTGGCATTGAGAACTGG
AAGGTCTGTCTTCCGGTGAGTCTCCCTCCCAGGGTCTGGCAGGGGGAAGGGGTGCCTGAGGTCC
CTGCAGCTGACCGTTTGCCTGGAGAGTAGCCAATCTCAGGACGACCTGCCCCTCGAAGCACAGA
GATACAGTTTCCTGTAGCCACAAGGCCACGAGGTCCCCAGTGCTCGCCTCTCTGGGACCAGCTG
CGTGCTGGCCTGGTGCATGGCTTTTCTGTCTCACTGGCCATCAGTATTGGACTGCTTTGTTAAT
TTGTTTATGTCAGCTCAACAATAGTATTTAATATGATTTGTTTCCTTATTTATTTAGCCAATCT
GTTTTGATTTGTCCCCCAACCCCTGCTGCCCCTGTGGTAATTTCCACATTTCTGACTGTTACAG
ACTTCCTACTACCTCTACGAATCTTCTGTCTCCTTGTTTCCTGATGGGGTTTTTACAGTGTTGC
GTCTAATGTAACTTAGACAATAAAGGGTTTGGTTGTCTACACTGCACCGCTCTCTGTGTCCCCT
GCCCTCTCCACCTGCGTTCTTCTGACTCCTGCCTCACTCAGCTCAGCCCCACCATCCTCTGCTT
TACTGTGTGACGTGTCTTCTCTTATACTTCCTCTTCCTGTCCATGCGCATCACACATGCTGGGT
CTCTCAGGACAGTTCAGGTGATTTACTTGTTCTGAACGCAGAGAGTGAAGACTCAGATAATAAT
AAATGCGTCGTGGGCTCTGTCTCCTCTGGGGAGCTGCTCACTGCACCTTCCCACACTTCTGCTG
GCCCTGGAAGTCTCTTCAGTCTTAGATGGAGACAGTTTAGCCTCTCCTGCACAGTACAATTTCC
AAGTCAAGTGGACTTGGCCTCTTTTGTTCTGAAAAGTATTAGATATTTTAAGAAGTTCCCCAAT
ATTTGCTTATTTATTTTTTTTAAAGCCCAGGAAGACACTGGTTTCTGGAAATTAGGCGTTCCAG
GCAACACAAGGCTACTCCATAAAACTAAAAGAGCTCTGCTGTCCCGGTGGGCTGCAGGGGAGTC
CCTTCCCTTTGGCTGCTGTGTACCCACCCAGATTCTCTTGCAGCTGGCACTGGGGTCTTCACAC
TCCTTCTACCCCCACAGGTGACCAGTTCCACGTCGGGCATCACGGGGCTGGCAGTGGCGGTCTT
TCCACCTCCTGGTAACCAGGAGAGTTGACACCTTTGGGTGGGTAAGGGTGCCTTCTAGGTCAAA
CAGTGAACGCAGTTCCCCAGGAAGGAAACATTCTCTGGACCTGTAAGACAAGACCCTCGCCGCC
AGCACCTGAGGAACATGTTTTGTTGTTTAACGCTTATAAATCAGGCAACTTCTAATTGCAACTT
ATATTCACCGAGAAAAAAAAGACACACGCCCCACAGACAGGGCCTTCCCGTGACACGTTTTTGA
CACTAATGACTAATACAAACTGCAGAGTCCTGGGACATACCCGTGTGAAGTGACCGCCAAGCAA
TGCGTTCTGTCTTCACCAACTCCGCTAATCATTCGTTGAGCTGGGAAGATGCAGAAGCCCATAG
AATTTGTACTTCTTCTTTTTAAAAAAAAAACCCACAATTTATAATGCTATATTTTGTACTCTTT
ATACTAGAATTTGTTACTAGATTGATGTATTTAACTATTTCTGAGAAAAAGTAATTCAATGTTA
CAGCTGTGTGATTAAAAAGTATTTAGATAAAACATATTCACTATTGGAATTTGAAATAAATAAA
AACATCTTGGAGTTGCAAGA

hide sequence

RefSeq Acc Id:

XM_008772100 ⟹ XP_008770322

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	76,302,068 - 76,386,526 (+)	NCBI
Rnor_6.0	18	79,773,314 - 79,857,908 (+)	NCBI

Sequence:

show sequence

GTCACACGCCTGCACTGTAACCCAAGAAGTGAAAGAACGGGGACCCGCAGCCCAACTTCGCACC
GTAACAAAGGCTGGGGTGCTTGCTGCATCTGCCACACCACAGAATGCACCTTCTCCTCAGAAGC
ACCTCTCTCCCCTCTGGGCAGCAGGAACCCCTCTCAAAATGAAGAGATAAGACTCTTCCGGCCC
CTACGACCCAAGGCTGTGCTGTGACACCCACACCGCCCTAATGGATCGCAGCAGAGAGGCTGAG
ATGGAGCTGAGGAGAGGACCCAGCCCACCCAGGGCTGGCAGGAGCCACGAAGTGGACGGGGACA
AGGCCGCCTGCCACAGCTGTTGCATCTGCGGCAAGAGCTTTCCTTTCCAGAGCTCCCTGTCCCA
GCATATGCGCAAGCACACAGGAGAGAAGCCCTACAAGTGTCCCTACTGTGACCACAGGGCTTCC
CAGAAGGGCAACCTCAAGATTCACATCCGCAGCCACCGGACGGGGACTCTGATCCAGGGGCACG
AGCCAGAGGTGGGAGAGGCTCAGCTGGGAGAGCTGCGTGTCTCCGAGGGCCTGGATGGGTGTGC
CAGCCCCACCAAGAGCACCTCTGCCTGCAACCGCGTGCTGAATGGGGCCGTGCCAACGGATGGC
AGCAAGATTCTGCTCAGGAGCAGCCGCAAGGAAGCAGAGGGCGCAGCCAGCGCCCAGGAAGACG
CCGAGGCTATGGTGCAGTGCTCCTTCTGTAAGAGCCGGTTTGAGCGTAAGAAGGACCTGGAGCT
GCACGTGCACCAAGCCCACAAGCCATTCAAGTGCAGGCTGTGCAGCTATGTCACCCTGCGGGAG
GAGTCTCTGCTCAGCCACATCGAGAGGGACCACATCACTGCACAGGTGCCCAATGGCAGCGAGG
CCTGTGTGGAGAACGGCAAGCCTGAGCTGAGCCCTGGGGAATTTCCCTGCGAGGTGTGTGGCCA
GGCCTTCAGCCAGACCTGGTTCCTGAAGGCACACATGAAGAAACACCGCGGCTCCTTTGACCAT
GGCTGCCACATCTGTGGCCGGAGATTCAAAGAGCCCTGGTTCCTCAAGAACCACATGAAGGCGC
ATGGACCCAAGGCAGGAAGCAAGAACAGGCCCAAGAGTGACCTGGACCCCATTGCTACCATCAA
CAACGTGGTACAGGAGGAGGTCATTGTCACCGGCCTGTCCCTCTATGAGATCTGCACGAAGTGC
GGGAACCTGTTTACAGACCTGGACAGCTTGAACGCCCACAACACCGTGCACCGTAAAGTTGAAG
CCAGCCGGAACCCAGCCCCGGCCGAGGAAGGGGATACAGAAGACCCCCCAGACACCAAGCAGTT
CTTCTTACAGTGCCTGAACCTGACACCATGTGTGGCTGGCGACGTGTCCCCCAGTGGGCAGGCT
GGACGGCGAGTGGCAGAGTTGGACCCTGTCAACAGCTATCAGGCCTGGCAGCTGGCCACCAGGG
GGAAGGTGGCCGAGCCGGCTGAGTACCTCAAGTACGGGACTTGGGACGAGGCGCTGGCCGGGGA
TGTCGCCTTTGACAAAGACAAGCGTGAGTATATACTGGTGAGTCAGGAGAAACGCAAGCGTGAA
TCGGATGCTCCTTCTACCCAGGCTCCCCCAAGGAAGAGGGCCAGTGTACCTGGGGACCCCATGC
TTTCTGGACACCTTGACCCCCGGCCAGCCTCACGCCCCAACCGCAGGGCTGCGGCCACCACTGG
CCAGGGGAAGTCCTCTGAGTGCTTCGAGTGCGGCAAGATCTTCCGCACCTACCACCAGATGGTG
CTCCACTCCCGTGTGCACCGCCGCGCACGCCGTGACAGGGATCCTGAAGGGGACCGGGCAGTAC
GTGCCCGCTGCGGTTCACTCAGCGAGGGTGATTCGGCGTCCCAGCCAAGCAGCCCTGGCTCAGC
CTGTGCCACTGCTGACTCCCCTGGCCTGGCGGAAGAAGTGGTGGACGATAGTGGTGAAGAGGCG
GTGTCTGAACCCGCATCAGGAGGCCAACCAGGACACTGCTGCTCTTCTGGAGAGGTGGCACCCA
TCCTGCTCTCCAACGGAGACCCGAGTCACAAACTTGGAAATAACCTGCCAGAGGAAGACATCAG
CGAGCCCACGGTGGGGATCGCCACGCCGTCTGTGTCCATACTTGAAAACAGCAGCAGAGAGACC
ACCAAGGGTCCCGAGCAGCATAGACATTCCCTTGACTTAAAGATGCCAGCATTTCACCCCAGGC
AGGAAGCCAGCACGCCCGAGCGGGTAGACTTCCCCTCGAGCATGGAAATAGCCAGCCTGCAGCA
CACCTTGGACAGCCAAGCTGGGCATTCGAAAGAAAAGCTGTCCGATTTGCACAAGGAGCACTGT
GGGGTAGGGAAGCGGGCATCTGCCCCTGACCTGGTCCCGTTGGACTTGAGCATGAAGTCGAGCC
GGGAAGACCCCAGCAGTAAGGAAGCCAGCTCCCTGCAGACCGCCCTAGTCATTCACCCGTGTCC
TTACTGTAACCACAAGACCTACTACCCCGAGGTCCTGTGGATGCACAAGCGCATCTGGCACAGG
ATCAGCTGCGGCTCTATAGCCCCTCCTTGGACTCAGCCCAGTGGCCACAAGAGCATCTGCAGCA
ACCTGGCTTTCCTCGCCCGCAGTGGGCGCACAGGGCCCCCGCCTGCTCTCGGGGGCAAGGACTG
CCAGCCCCTGCTCCTTGCTCGTTTTACCCGCACCCAGGTGCCAGGTGGGGTACCAGGATCAAAG
GGCAGCTCTTCTCCCCTTGGGGTGACCACAAAAGCCGCTAGCATACCTAAGAACAAGGAGAGCC
CTTCTGGGGGCCCCTGCGCTCCGTGGGCCCCTGGCCCCGATGGGTATCGGCAGACCAGAGCCGG
CCATGGCCAGGATCCACCTAGTGCTGCAGTGCAGGGACCCCTGCCCAAGCCCAAACAGGAGGCT
AGCTCCAGGCTGGCACCTTCCCCAGGCAGTGGGGGCCTCAGCAGAAGTGCCACCCCTACACCCT
CAGTTATAACCCGTGTTGGTGCCCAGCCCTCAGCCAACAGCAAGCCAGTGGAGAAACTCGGGGT
CCCGGCAGTGGGGACTGGCTTTACCCCTCCGAATAAGCACAGTGCCCCAGACTCTCTGAAAGCC
AAATTCAGTCCTCAGCCTCAGGGTCAGCCTCCCTCGAAAGGTGAAGGAGGCTCTCCTCTACCTC
CCCGAGAAGCCCCTGTGAAGCCGGCCCAGGAGCTGCGAACGCTAGCCACGTGTGCAGCAGGGCC
CCGAGGGGACGCAGCCTTGCAGGCTCCGCCCGGCGCGCCTCCCACCTTACACTCCATCCAGCAG
GAGCCGGCGGCAGCCGAGGGCCAGGAGAAGCGCCTGGACATCCTCAGTATCTTTAAGTACATTC
CAAAGGACTTCGCCACACTCTACCAGGGCTGGGGTGTCAGCAGCCCTGGGCCTGAGCACAGAGG
GGAGAGACCACACTGCCCCAGGGACTGTGCCGGCAGGGCCCCTCCGAAAGGGGACCTAGAGACA
CACCTCCAGCACCCAGCCCGTGATAGTGTTGACTGTGGCCTCACGGGTGATTGGAAGGCTCCCA
GCAGTGACCATGGCCACTTTGGGGAAGAAGATCCAAGGTCTCCTGACCAGACACCTTAGACCTG
AGAGCCGTTGCACCAGAGCAGACCAGGGAGATGCCTCCTTGGTAACATGTAGGGACAGCAAAGA
TGCTATGCCTAGGATTCTGTGTAGCTCTTTCACACACATGTGTGTGCTCATCGCCCATGGCCTG
TGTTTCCTCACAATAAGCAGTGGTATTGGCAGGCACAGTAGCAGCTCAAGGAGTCTGTGTTATT
CAAGACAGGCATGAGACACTGGAAAAAAGATGCTGGTGTGTTTGGATGGGCTGGGCACTGTGGG
GAGGTCCAGTGCTCAGGACAGATGATGCTGTCAGAGTGTGGGGGACGGAGGGGTGTGCACTACT
GCCTCTCCCCCTCAGTGGGGACTCACAGTAGCAATGAGAGAGAAAGAGGGTGTTCAGGTAAGAC
TTGTTCGAATGCTGTGGAGATGAGCTTGGTGAGGCAGGGCGATGATAGCCTCATGGTTAGGAGT
CTGGCCACGACTCTGGGCTCTCACGCCCTCCATGCCGAGTTCTCACCATTCGGGCTGCGTCTGG
CTCAGGAAACACTGCAGAGGTGGGAACACAGAAATCTGCTTTGGAAGGAAACGTTAGTGAACAC
TAAGAGGGCAGGTGTCTTCGTTTATTCTCAGGACCTTTTTTGTAACAGGGCTACATTCTGCAAA
CTGCTCACAAAAGACTAAGCCACTGAATCCTCCCACTTTGGGCCTGTTTTAGTAATGGCAGAAG
AATCCCTGAGCAGATTTGGGGCCCTAGATCATTAGGGTGCTAGTGCTTTGGAACTTTCTCTCCC
TCCCCATCCCAGCCTTTCCCTTGCACCCCCCCAGCAAATAGATGTCTTTCCCCATTGGGCCTGG
TGAGCACCACTGGACAAGTGACTCTGTTCACAGATGACTGGGGTCTCCAGGCCTGAGGGCAAGG
ACGGCTTTATATACCTCTTCCTTAGTCACGCAAGTCCACGTTTCTGCGGTGGGGTGAAGGCCCT
AGCAGAGGCTCTGAGCCCACGCGACGTGCGCAGTGGGGACTGTTCGGCAGGTAGCAGCGACTCC
TCCCCCGTCCGTCGCTGTGGCACTGTGTGGTGGCGATACTTCTGCGAGTTCCAGATGTTTGCAC
ATGTGGTTTTATGCATTATCAAAATTACTGCTGCCTTGAATGAAACATTCTGTGAAAGTTTTTG
CAAAAGCTTTACTAGTTTTTTTTTTATTGTGAAATTTTGTAAAGGCAGGAAATGGATTAAGACA
AGCATGCTAAATATATTTTTCAGAAAAAAAGCAATAATTTTACATGTACAGAAATTATCCTAAC
CTTTAATACTGGTGAGAGCGACAGTTTACTTAACCCAGCAATGGATCAGTGCGGTTTCTGTAGG
AAATGGGCTTCTGATACAAAGACTTGTTTCAACACACATGTATACATGAATCCTGGCGTGTGGT
TTCTCTGTTCTAATGATCTGTTGGATTATTATTATTATATTATTATTATTGTTATTGTTATTGT
TAGCTGATGTTTGGTTCCAGATTCTATTTGTCACTGTTTTAATTACTTGACTGTTCAGGTGACT
GCTGCACTTGCAAGAATGCAGTGCTAACTGGCTAGCAGATGCGTATATATACATATATACGTAT
ATATATATATGCTAACTGGCTAGCAGATGCGTATATATACATATATACATATATATGTGTGTGT
ATATATATATACTAACTGGCTAGCAGATACGGTTATATACATATATACGTATATATATACTAAC
TGGCTAGCAGATGCGTATATATACATATATACGTATATATATATAATTATTTTTTTTTACTTAT
TTTTTCCTGATACTCCTACACCAGGTATGTATGAGAACGGTTTGCCATGCTGAGTGCTTGGGAA
TATCAGTCATTCTGAGACGTACATGGAGCAGACCGCAGAGACGCATTCCTCTCTCCTCCTGAGG
CAGCGTAGTTCCTTTCTGTTGAGCTTGTCTGCTCATTATGATAGGCTCCCCATCTGTCTGCATT
TTCTGGCTTTTTGTTTCCTTGGCTGGAAGTAAAGGTGAGAGCTAGGAATGTCAGGGCCTGTGAT
TCGGCCCCATCTATTCTGTGTCTTAGTTATTAAACAGTTCTGTACACAAAGGGACACGAAGGTG
TCGTTTGCGTTTTTACTGTGTCTGAAGCTGCACGTGGCATTGAGAACTGGAAGGTCTGTCTTCC
GGTGAGTCTCCCTCCCAGGGTCTGGCAGGGGGAAGGGGTGCCTGAGGTCCCTGCAGCTGACCGT
TTGCCTGGAGAGTAGCCAATCTCAGGACGACCTGCCCCTCGAAGCACAGAGATACAGTTTCCTG
TAGCCACAAGGCCACGAGGTCCCCAGTGCTCGCCTCTCTGGGACCAGCTGCGTGCTGGCCTGGT
GCATGGCTTTTCTGTCTCACTGGCCATCAGTATTGGACTGCTTTGTTAATTTGTTTATGTCAGC
TCAACAATAGTATTTAATATGATTTGTTTCCTTATTTATTTAGCCAATCTGTTTTGATTTGTCC
CCCAACCCCTGCTGCCCCTGTGGTAATTTCCACATTTCTGACTGTTACAGACTTCCTACTACCT
CTACGAATCTTCTGTCTCCTTGTTTCCTGATGGGGTTTTTACAGTGTTGCGTCTAATGTAACTT
AGACAATAAAGGGTTTGGTTGTCTACACTGCACCGCTCTCTGTGTCCCCTGCCCTCTCCACCTG
CGTTCTTCTGACTCCTGCCTCACTCAGCTCAGCCCCACCATCCTCTGCTTTACTGTGTGACGTG
TCTTCTCTTATACTTCCTCTTCCTGTCCATGCGCATCACACATGCTGGGTCTCTCAGGACAGTT
CAGGTGATTTACTTGTTCTGAACGCAGAGAGTGAAGACTCAGATAATAATAAATGCGTCGTGGG
CTCTGTCTCCTCTGGGGAGCTGCTCACTGCACCTTCCCACACTTCTGCTGGCCCTGGAAGTCTC
TTCAGTCTTAGATGGAGACAGTTTAGCCTCTCCTGCACAGTACAATTTCCAAGTCAAGTGGACT
TGGCCTCTTTTGTTCTGAAAAGTATTAGATATTTTAAGAAGTTCCCCAATATTTGCTTATTTAT
TTTTTTTAAAGCCCAGGAAGACACTGGTTTCTGGAAATTAGGCGTTCCAGGCAACACAAGGCTA
CTCCATAAAACTAAAAGAGCTCTGCTGTCCCGGTGGGCTGCAGGGGAGTCCCTTCCCTTTGGCT
GCTGTGTACCCACCCAGATTCTCTTGCAGCTGGCACTGGGGTCTTCACACTCCTTCTACCCCCA
CAGGTGACCAGTTCCACGTCGGGCATCACGGGGCTGGCAGTGGCGGTCTTTCCACCTCCTGGTA
ACCAGGAGAGTTGACACCTTTGGGTGGGTAAGGGTGCCTTCTAGGTCAAACAGTGAACGCAGTT
CCCCAGGAAGGAAACATTCTCTGGACCTGTAAGACAAGACCCTCGCCGCCAGCACCTGAGGAAC
ATGTTTTGTTGTTTAACGCTTATAAATCAGGCAACTTCTAATTGCAACTTATATTCACCGAGAA
AAAAAAGACACACGCCCCACAGACAGGGCCTTCCCGTGACACGTTTTTGACACTAATGACTAAT
ACAAACTGCAGAGTCCTGGGACATACCCGTGTGAAGTGACCGCCAAGCAATGCGTTCTGTCTTC
ACCAACTCCGCTAATCATTCGTTGAGCTGGGAAGATGCAGAAGCCCATAGAATTTGTACTTCTT
CTTTTTAAAAAAAAAACCCACAATTTATAATGCTATATTTTGTACTCTTTATACTAGAATTTGT
TACTAGATTGATGTATTTAACTATTTCTGAGAAAAAGTAATTCAATGTTACAGCTGTGTGATTA
AAAAGTATTTAGATAAAACATATTCACTATTGGAATTTGAAATAAATAAAAACATCTTGGAGTT
GCAAG

hide sequence

RefSeq Acc Id:

XM_017600868 ⟹ XP_017456357

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	76,298,787 - 76,386,526 (+)	NCBI
Rnor_6.0	18	79,770,005 - 79,857,909 (+)	NCBI

Sequence:

show sequence

TCTGGCTTTGTACACTTCGTCAAAGGCGACGCGGGAGGAGGGGAGCTCGGATGCGCTCTCATCC
ATTAGGAGACAAAGAGCAAATTGCCTTACTTTAAAGTAAAACGCTCTGGCTAATGAAGGTGCTT
GCTGCATCTGCCACACCACAGAATGCACCTTCTCCTCAGAAGCACCTCTCTCCCCTCTGGGCAG
CAGGAACCCCTCTCAAAATGAAGAGATAAGACTCTTCCGGCCCCTACGACCCAAGGCTGTGCTG
TGACACCCACACCGCCCTAATGGATCGCAGCAGAGAGGCTGAGATGGAGCTGAGGAGAGGACCC
AGCCCACCCAGGGCTGGCAGGAGCCACGAAGTGGACGGGGACAAGGCCGCCTGCCACAGCTGTT
GCATCTGCGGCAAGAGCTTTCCTTTCCAGAGCTCCCTGTCCCAGCATATGCGCAAGCACACAGG
AGAGAAGCCCTACAAGTGTCCCTACTGTGACCACAGGGCTTCCCAGAAGGGCAACCTCAAGATT
CACATCCGCAGCCACCGGACGGGGACTCTGATCCAGGGGCACGAGCCAGAGGTGGGAGAGGCTC
AGCTGGGAGAGCTGCGTGTCTCCGAGGGCCTGGATGGGTGTGCCAGCCCCACCAAGAGCACCTC
TGCCTGCAACCGCGTGCTGAATGGGGCCGTGCCAACGGATGGCAGCAAGATTCTGCTCAGGAGC
AGCCGCAAGGAAGCAGAGGGCGCAGCCAGCGCCCAGGAAGACGCCGAGGCTATGGTGCAGTGCT
CCTTCTGTAAGAGCCGGTTTGAGCGTAAGAAGGACCTGGAGCTGCACGTGCACCAAGCCCACAA
GCCATTCAAGTGCAGGCTGTGCAGCTATGTCACCCTGCGGGAGGAGTCTCTGCTCAGCCACATC
GAGAGGGACCACATCACTGCACAGGTGCCCAATGGCAGCGAGGCCTGTGTGGAGAACGGCAAGC
CTGAGCTGAGCCCTGGGGAATTTCCCTGCGAGGTGTGTGGCCAGGCCTTCAGCCAGACCTGGTT
CCTGAAGGCACACATGAAGAAACACCGCGGCTCCTTTGACCATGGCTGCCACATCTGTGGCCGG
AGATTCAAAGAGCCCTGGTTCCTCAAGAACCACATGAAGGCGCATGGACCCAAGGCAGGAAGCA
AGAACAGGCCCAAGAGTGACCTGGACCCCATTGCTACCATCAACAACGTGGTACAGGAGGAGGT
CATTGTCACCGGCCTGTCCCTCTATGAGATCTGCACGAAGTGCGGGAACCTGTTTACAGACCTG
GACAGCTTGAACGCCCACAACACCGTGCACCGTAAAGTTGAAGCCAGCCGGAACCCAGCCCCGG
CCGAGGAAGGGGATACAGAAGACCCCCCAGACACCAAGCAGTTCTTCTTACAGTGCCTGAACCT
GACACCATGTGTGGCTGGCGACGTGTCCCCCAGTGGGCAGGCTGGACGGCGAGTGGCAGAGTTG
GACCCTGTCAACAGCTATCAGGCCTGGCAGCTGGCCACCAGGGGGAAGGTGGCCGAGCCGGCTG
AGTACCTCAAGTACGGGACTTGGGACGAGGCGCTGGCCGGGGATGTCGCCTTTGACAAAGACAA
GCGTGAGTATATACTGGTGAGTCAGGAGAAACGCAAGCGTGAATCGGATGCTCCTTCTACCCAG
GCTCCCCCAAGGAAGAGGGCCAGTGTACCTGGGGACCCCATGCTTTCTGGACACCTTGACCCCC
GGCCAGCCTCACGCCCCAACCGCAGGGCTGCGGCCACCACTGGCCAGGGGAAGTCCTCTGAGTG
CTTCGAGTGCGGCAAGATCTTCCGCACCTACCACCAGATGGTGCTCCACTCCCGTGTGCACCGC
CGCGCACGCCGTGACAGGGATCCTGAAGGGGACCGGGCAGTACGTGCCCGCTGCGGTTCACTCA
GCGAGGGTGATTCGGCGTCCCAGCCAAGCAGCCCTGGCTCAGCCTGTGCCACTGCTGACTCCCC
TGGCCTGGCGGAAGAAGTGGTGGACGATAGTGGTGAAGAGGCGGTGTCTGAACCCGCATCAGGA
GGCCAACCAGGACACTGCTGCTCTTCTGGAGAGGTGGCACCCATCCTGCTCTCCAACGGAGACC
CGAGTCACAAACTTGGAAATAACCTGCCAGAGGAAGACATCAGCGAGCCCACGGTGGGGATCGC
CACGCCGTCTGTGTCCATACTTGAAAACAGCAGCAGAGAGACCACCAAGGGTCCCGAGCAGCAT
AGACATTCCCTTGACTTAAAGATGCCAGCATTTCACCCCAGGCAGGAAGCCAGCACGCCCGAGC
GGGTAGACTTCCCCTCGAGCATGGAAATAGCCAGCCTGCAGCACACCTTGGACAGCCAAGCTGG
GCATTCGAAAGAAAAGCTGTCCGATTTGCACAAGGAGCACTGTGGGGTAGGGAAGCGGGCATCT
GCCCCTGACCTGGTCCCGTTGGACTTGAGCATGAAGTCGAGCCGGGAAGACCCCAGCAGTAAGG
AAGCCAGCTCCCTGCAGACCGCCCTAGTCATTCACCCGTGTCCTTACTGTAACCACAAGACCTA
CTACCCCGAGGTCCTGTGGATGCACAAGCGCATCTGGCACAGGATCAGCTGCGGCTCTATAGCC
CCTCCTTGGACTCAGCCCAGTGGCCACAAGAGCATCTGCAGCAACCTGGCTTTCCTCGCCCGCA
GTGGGCGCACAGGGCCCCCGCCTGCTCTCGGGGGCAAGGACTGCCAGCCCCTGCTCCTTGCTCG
TTTTACCCGCACCCAGGTGCCAGGTGGGGTACCAGGATCAAAGGGCAGCTCTTCTCCCCTTGGG
GTGACCACAAAAGCCGCTAGCATACCTAAGAACAAGGAGAGCCCTTCTGGGGGCCCCTGCGCTC
CGTGGGCCCCTGGCCCCGATGGGTATCGGCAGACCAGAGCCGGCCATGGCCAGGATCCACCTAG
TGCTGCAGTGCAGGGACCCCTGCCCAAGCCCAAACAGGAGGCTAGCTCCAGGCTGGCACCTTCC
CCAGGCAGTGGGGGCCTCAGCAGAAGTGCCACCCCTACACCCTCAGTTATAACCCGTGTTGGTG
CCCAGCCCTCAGCCAACAGCAAGCCAGTGGAGAAACTCGGGGTCCCGGCAGTGGGGACTGGCTT
TACCCCTCCGAATAAGCACAGTGCCCCAGACTCTCTGAAAGCCAAATTCAGTCCTCAGCCTCAG
GGTCAGCCTCCCTCGAAAGGTGAAGGAGGCTCTCCTCTACCTCCCCGAGAAGCCCCTGTGAAGC
CGGCCCAGGAGCTGCGAACGCTAGCCACGTGTGCAGCAGGGCCCCGAGGGGACGCAGCCTTGCA
GGCTCCGCCCGGCGCGCCTCCCACCTTACACTCCATCCAGCAGGAGCCGGCGGCAGCCGAGGGC
CAGGAGAAGCGCCTGGACATCCTCAGTATCTTTAAGTACATTCCAAAGGACTTCGCCACACTCT
ACCAGGGCTGGGGTGTCAGCAGCCCTGGGCCTGAGCACAGAGGGACACCGCGGACACAGGCCCG
CCAGGGAGACTTTGTCTGTGTGGAGTGCGGCAAGAGTTTCCACCAGCCCAGCCAACTCAGGGCC
CACCTTCGGGCACACACAGGGGAGAGACCACACTGCCCCAGGGACTGTGCCGGCAGGGCCCCTC
CGAAAGGGGACCTAGAGACACACCTCCAGCACCCAGCCCGTGATAGTGTTGACTGTGGCCTCAC
GGGTGATTGGAAGGCTCCCAGCAGTGACCATGGCCACTTTGGGGAAGAAGATCCAAGGTCTCCT
GACCAGACACCTTAGACCTGAGAGCCGTTGCACCAGAGCAGACCAGGGAGATGCCTCCTTGGTA
ACATGTAGGGACAGCAAAGATGCTATGCCTAGGATTCTGTGTAGCTCTTTCACACACATGTGTG
TGCTCATCGCCCATGGCCTGTGTTTCCTCACAATAAGCAGTGGTATTGGCAGGCACAGTAGCAG
CTCAAGGAGTCTGTGTTATTCAAGACAGGCATGAGACACTGGAAAAAAGATGCTGGTGTGTTTG
GATGGGCTGGGCACTGTGGGGAGGTCCAGTGCTCAGGACAGATGATGCTGTCAGAGTGTGGGGG
ACGGAGGGGTGTGCACTACTGCCTCTCCCCCTCAGTGGGGACTCACAGTAGCAATGAGAGAGAA
AGAGGGTGTTCAGGTAAGACTTGTTCGAATGCTGTGGAGATGAGCTTGGTGAGGCAGGGCGATG
ATAGCCTCATGGTTAGGAGTCTGGCCACGACTCTGGGCTCTCACGCCCTCCATGCCGAGTTCTC
ACCATTCGGGCTGCGTCTGGCTCAGGAAACACTGCAGAGGTGGGAACACAGAAATCTGCTTTGG
AAGGAAACGTTAGTGAACACTAAGAGGGCAGGTGTCTTCGTTTATTCTCAGGACCTTTTTTGTA
ACAGGGCTACATTCTGCAAACTGCTCACAAAAGACTAAGCCACTGAATCCTCCCACTTTGGGCC
TGTTTTAGTAATGGCAGAAGAATCCCTGAGCAGATTTGGGGCCCTAGATCATTAGGGTGCTAGT
GCTTTGGAACTTTCTCTCCCTCCCCATCCCAGCCTTTCCCTTGCACCCCCCCAGCAAATAGATG
TCTTTCCCCATTGGGCCTGGTGAGCACCACTGGACAAGTGACTCTGTTCACAGATGACTGGGGT
CTCCAGGCCTGAGGGCAAGGACGGCTTTATATACCTCTTCCTTAGTCACGCAAGTCCACGTTTC
TGCGGTGGGGTGAAGGCCCTAGCAGAGGCTCTGAGCCCACGCGACGTGCGCAGTGGGGACTGTT
CGGCAGGTAGCAGCGACTCCTCCCCCGTCCGTCGCTGTGGCACTGTGTGGTGGCGATACTTCTG
CGAGTTCCAGATGTTTGCACATGTGGTTTTATGCATTATCAAAATTACTGCTGCCTTGAATGAA
ACATTCTGTGAAAGTTTTTGCAAAAGCTTTACTAGTTTTTTTTTTATTGTGAAATTTTGTAAAG
GCAGGAAATGGATTAAGACAAGCATGCTAAATATATTTTTCAGAAAAAAAGCAATAATTTTACA
TGTACAGAAATTATCCTAACCTTTAATACTGGTGAGAGCGACAGTTTACTTAACCCAGCAATGG
ATCAGTGCGGTTTCTGTAGGAAATGGGCTTCTGATACAAAGACTTGTTTCAACACACATGTATA
CATGAATCCTGGCGTGTGGTTTCTCTGTTCTAATGATCTGTTGGATTATTATTATTATATTATT
ATTATTGTTATTGTTATTGTTAGCTGATGTTTGGTTCCAGATTCTATTTGTCACTGTTTTAATT
ACTTGACTGTTCAGGTGACTGCTGCACTTGCAAGAATGCAGTGCTAACTGGCTAGCAGATGCGT
ATATATACATATATACGTATATATATATATGCTAACTGGCTAGCAGATGCGTATATATACATAT
ATACATATATATGTGTGTGTATATATATATACTAACTGGCTAGCAGATACGGTTATATACATAT
ATACGTATATATATACTAACTGGCTAGCAGATGCGTATATATACATATATACGTATATATATAT
AATTATTTTTTTTTACTTATTTTTTCCTGATACTCCTACACCAGGTATGTATGAGAACGGTTTG
CCATGCTGAGTGCTTGGGAATATCAGTCATTCTGAGACGTACATGGAGCAGACCGCAGAGACGC
ATTCCTCTCTCCTCCTGAGGCAGCGTAGTTCCTTTCTGTTGAGCTTGTCTGCTCATTATGATAG
GCTCCCCATCTGTCTGCATTTTCTGGCTTTTTGTTTCCTTGGCTGGAAGTAAAGGTGAGAGCTA
GGAATGTCAGGGCCTGTGATTCGGCCCCATCTATTCTGTGTCTTAGTTATTAAACAGTTCTGTA
CACAAAGGGACACGAAGGTGTCGTTTGCGTTTTTACTGTGTCTGAAGCTGCACGTGGCATTGAG
AACTGGAAGGTCTGTCTTCCGGTGAGTCTCCCTCCCAGGGTCTGGCAGGGGGAAGGGGTGCCTG
AGGTCCCTGCAGCTGACCGTTTGCCTGGAGAGTAGCCAATCTCAGGACGACCTGCCCCTCGAAG
CACAGAGATACAGTTTCCTGTAGCCACAAGGCCACGAGGTCCCCAGTGCTCGCCTCTCTGGGAC
CAGCTGCGTGCTGGCCTGGTGCATGGCTTTTCTGTCTCACTGGCCATCAGTATTGGACTGCTTT
GTTAATTTGTTTATGTCAGCTCAACAATAGTATTTAATATGATTTGTTTCCTTATTTATTTAGC
CAATCTGTTTTGATTTGTCCCCCAACCCCTGCTGCCCCTGTGGTAATTTCCACATTTCTGACTG
TTACAGACTTCCTACTACCTCTACGAATCTTCTGTCTCCTTGTTTCCTGATGGGGTTTTTACAG
TGTTGCGTCTAATGTAACTTAGACAATAAAGGGTTTGGTTGTCTACACTGCACCGCTCTCTGTG
TCCCCTGCCCTCTCCACCTGCGTTCTTCTGACTCCTGCCTCACTCAGCTCAGCCCCACCATCCT
CTGCTTTACTGTGTGACGTGTCTTCTCTTATACTTCCTCTTCCTGTCCATGCGCATCACACATG
CTGGGTCTCTCAGGACAGTTCAGGTGATTTACTTGTTCTGAACGCAGAGAGTGAAGACTCAGAT
AATAATAAATGCGTCGTGGGCTCTGTCTCCTCTGGGGAGCTGCTCACTGCACCTTCCCACACTT
CTGCTGGCCCTGGAAGTCTCTTCAGTCTTAGATGGAGACAGTTTAGCCTCTCCTGCACAGTACA
ATTTCCAAGTCAAGTGGACTTGGCCTCTTTTGTTCTGAAAAGTATTAGATATTTTAAGAAGTTC
CCCAATATTTGCTTATTTATTTTTTTTAAAGCCCAGGAAGACACTGGTTTCTGGAAATTAGGCG
TTCCAGGCAACACAAGGCTACTCCATAAAACTAAAAGAGCTCTGCTGTCCCGGTGGGCTGCAGG
GGAGTCCCTTCCCTTTGGCTGCTGTGTACCCACCCAGATTCTCTTGCAGCTGGCACTGGGGTCT
TCACACTCCTTCTACCCCCACAGGTGACCAGTTCCACGTCGGGCATCACGGGGCTGGCAGTGGC
GGTCTTTCCACCTCCTGGTAACCAGGAGAGTTGACACCTTTGGGTGGGTAAGGGTGCCTTCTAG
GTCAAACAGTGAACGCAGTTCCCCAGGAAGGAAACATTCTCTGGACCTGTAAGACAAGACCCTC
GCCGCCAGCACCTGAGGAACATGTTTTGTTGTTTAACGCTTATAAATCAGGCAACTTCTAATTG
CAACTTATATTCACCGAGAAAAAAAAGACACACGCCCCACAGACAGGGCCTTCCCGTGACACGT
TTTTGACACTAATGACTAATACAAACTGCAGAGTCCTGGGACATACCCGTGTGAAGTGACCGCC
AAGCAATGCGTTCTGTCTTCACCAACTCCGCTAATCATTCGTTGAGCTGGGAAGATGCAGAAGC
CCATAGAATTTGTACTTCTTCTTTTTAAAAAAAAAACCCACAATTTATAATGCTATATTTTGTA
CTCTTTATACTAGAATTTGTTACTAGATTGATGTATTTAACTATTTCTGAGAAAAAGTAATTCA
ATGTTACAGCTGTGTGATTAAAAAGTATTTAGATAAAACATATTCACTATTGGAATTTGAAATA
AATAAAAACATCTTGGAGTTGCAAGA

hide sequence

RefSeq Acc Id:

XM_017600870 ⟹ XP_017456359

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	76,301,478 - 76,386,526 (+)	NCBI
Rnor_6.0	18	79,772,673 - 79,857,908 (+)	NCBI

Sequence:

show sequence

CCTAGGGGGTGGTGATGAAGATGCAGGGTTGGGTTAAAGACACGCGTGCGCCTCCCCTTCTGGA
GACCCCCGTGGAGGCCACCGACCTTGGAAGGCCCAGTGTCCACACCGGCTCTGCAGTGTCTGCA
TGCACCGAGGTCACCTCGAGGGTGCCCCCGCCCCGAGATTTCCAACTTGGTTACTAGGTGGTGT
CAGCCCGTGTACCTCCTCCTACGCGGGCCGTTTCCACCCAACCGGATCGCCACCCCTTTCGGCC
CTCTCTCCAATCTCTGCAAGCCCGCGGCTTGAGGAATGGGTGCTTGCTGCATCTGCCACACCAC
AGAATGCACCTTCTCCTCAGAAGCACCTCTCTCCCCTCTGGGCAGCAGGAACCCCTCTCAAAAT
GAAGAGATAAGACTCTTCCGGCCCCTACGACCCAAGGCTGTGCTGTGACACCCACACCGCCCTA
ATGGATCGCAGCAGAGAGGCTGAGATGGAGCTGAGGAGAGGACCCAGCCCACCCAGGGCTGGCA
GGAGCCACGAAGTGGACGGGGACAAGGCCGCCTGCCACAGCTGTTGCATCTGCGGCAAGAGCTT
TCCTTTCCAGAGCTCCCTGTCCCAGCATATGCGCAAGCACACAGGAGAGAAGCCCTACAAGTGT
CCCTACTGTGACCACAGGGCTTCCCAGAAGGGCAACCTCAAGATTCACATCCGCAGCCACCGGA
CGGGGACTCTGATCCAGGGGCACGAGCCAGAGGTGGGAGAGGCTCAGCTGGGAGAGCTGCGTGT
CTCCGAGGGCCTGGATGGGTGTGCCAGCCCCACCAAGAGCACCTCTGCCTGCAACCGCGTGCTG
AATGGGGCCGTGCCAACGGATGGCAGCAAGATTCTGCTCAGGAGCAGCCGCAAGGAAGCAGAGG
GCGCAGCCAGCGCCCAGGAAGACGCCGAGGCTATGGTGCAGTGCTCCTTCTGTAAGAGCCGGTT
TGAGCGTAAGAAGGACCTGGAGCTGCACGTGCACCAAGCCCACAAGCCATTCAAGTGCAGGCTG
TGCAGCTATGTCACCCTGCGGGAGGAGTCTCTGCTCAGCCACATCGAGAGGGACCACATCACTG
CACAGGTGCCCAATGGCAGCGAGGCCTGTGTGGAGAACGGCAAGCCTGAGCTGAGCCCTGGGGA
ATTTCCCTGCGAGGTGTGTGGCCAGGCCTTCAGCCAGACCTGGTTCCTGAAGGCACACATGAAG
AAACACCGCGGCTCCTTTGACCATGGCTGCCACATCTGTGGCCGGAGATTCAAAGAGCCCTGGT
TCCTCAAGAACCACATGAAGGCGCATGGACCCAAGGCAGGAAGCAAGAACAGGCCCAAGAGTGA
CCTGGACCCCATTGCTACCATCAACAACGTGGTACAGGAGGAGGTCATTGTCACCGGCCTGTCC
CTCTATGAGATCTGCACGAAGTGCGGGAACCTGTTTACAGACCTGGACAGCTTGAACGCCCACA
ACACCGTGCACCGTAAAGTTGAAGCCAGCCGGAACCCAGCCCCGGCCGAGGAAGGGGATACAGA
AGACCCCCCAGACACCAAGCAGTTCTTCTTACAGTGCCTGAACCTGACACCATGTGTGGCTGGC
GACGTGTCCCCCAGTGGGCAGGCTGGACGGCGAGTGGCAGAGTTGGACCCTGTCAACAGCTATC
AGGCCTGGCAGCTGGCCACCAGGGGGAAGGTGGCCGAGCCGGCTGAGTACCTCAAGTACGGGAC
TTGGGACGAGGCGCTGGCCGGGGATGTCGCCTTTGACAAAGACAAGCGTGAGTATATACTGGTG
AGTCAGGAGAAACGCAAGCGTGAATCGGATGCTCCTTCTACCCAGGCTCCCCCAAGGAAGAGGG
CCAGTGTACCTGGGGACCCCATGCTTTCTGGACACCTTGACCCCCGGCCAGCCTCACGCCCCAA
CCGCAGGGCTGCGGCCACCACTGGCCAGGGGAAGTCCTCTGAGTGCTTCGAGTGCGGCAAGATC
TTCCGCACCTACCACCAGATGGTGCTCCACTCCCGTGTGCACCGCCGCGCACGCCGTGACAGGG
ATCCTGAAGGGGACCGGGCAGTACGTGCCCGCTGCGGTTCACTCAGCGAGGGTGATTCGGCGTC
CCAGCCAAGCAGCCCTGGCTCAGCCTGTGCCACTGCTGACTCCCCTGGCCTGGCGGAAGAAGTG
GTGGACGATAGTGGTGAAGAGGCGGTGTCTGAACCCGCATCAGGAGGCCAACCAGGACACTGCT
GCTCTTCTGGAGAGGTGGCACCCATCCTGCTCTCCAACGGAGACCCGAGTCACAAACTTGGAAA
TAACCTGCCAGAGGAAGACATCAGCGAGCCCACGGTGGGGATCGCCACGCCGTCTGTGTCCATA
CTTGAAAACAGCAGCAGAGAGACCACCAAGGGTCCCGAGCAGCATAGACATTCCCTTGACTTAA
AGATGCCAGCATTTCACCCCAGGCAGGAAGCCAGCACGCCCGAGCGGGTAGACTTCCCCTCGAG
CATGGAAATAGCCAGCCTGCAGCACACCTTGGACAGCCAAGCTGGGCATTCGAAAGAAAAGCTG
TCCGATTTGCACAAGGAGCACTGTGGGGTAGGGAAGCGGGCATCTGCCCCTGACCTGGTCCCGT
TGGACTTGAGCATGAAGTCGAGCCGGGAAGACCCCAGCAGTAAGGAAGCCAGCTCCCTGCAGAC
CGCCCTAGTCATTCACCCGTGTCCTTACTGTAACCACAAGACCTACTACCCCGAGGTCCTGTGG
ATGCACAAGCGCATCTGGCACAGGATCAGCTGCGGCTCTATAGCCCCTCCTTGGACTCAGCCCA
GTGGCCACAAGAGCATCTGCAGCAACCTGGCTTTCCTCGCCCGCAGTGGGCGCACAGGGCCCCC
GCCTGCTCTCGGGGGCAAGGACTGCCAGCCCCTGCTCCTTGCTCGTTTTACCCGCACCCAGGTG
CCAGGTGGGGTACCAGGATCAAAGGGCAGCTCTTCTCCCCTTGGGGTGACCACAAAAGCCGCTA
GCATACCTAAGAACAAGGAGAGCCCTTCTGGGGGCCCCTGCGCTCCGTGGGCCCCTGGCCCCGA
TGGGTATCGGCAGACCAGAGCCGGCCATGGCCAGGATCCACCTAGTGCTGCAGTGCAGGGACCC
CTGCCCAAGCCCAAACAGGAGGCTAGCTCCAGGCTGGCACCTTCCCCAGGCAGTGGGGGCCTCA
GCAGAAGTGCCACCCCTACACCCTCAGTTATAACCCGTGTTGGTGCCCAGCCCTCAGCCAACAG
CAAGCCAGTGGAGAAACTCGGGGTCCCGGCAGTGGGGACTGGCTTTACCCCTCCGAATAAGCAC
AGTGCCCCAGACTCTCTGAAAGCCAAATTCAGTCCTCAGCCTCAGGGTCAGCCTCCCTCGAAAG
GTGAAGGAGGCTCTCCTCTACCTCCCCGAGAAGCCCCTGTGAAGCCGGCCCAGGAGCTGCGAAC
GCTAGCCACGTGTGCAGCAGGGCCCCGAGGGGACGCAGCCTTGCAGGCTCCGCCCGGCGCGCCT
CCCACCTTACACTCCATCCAGCAGGAGCCGGCGGCAGCCGAGGGCCAGGAGAAGCGCCTGGACA
TCCTCAGTATCTTTAAGTACATTCCAAAGGACTTCGCCACACTCTACCAGGGCTGGGGTGTCAG
CAGCCCTGGGCCTGAGCACAGAGGGACACCGCGGACACAGGCCCGCCAGGGAGACTTTGTCTGT
GTGGAGTGCGGCAAGAGTTTCCACCAGCCCAGCCAACTCAGGGCCCACCTTCGGGCACACACAG
GGGAGAGACCACACTGCCCCAGGGACTGTGCCGGCAGGGCCCCTCCGAAAGGGGACCTAGAGAC
ACACCTCCAGCACCCAGCCCGTGATAGTGTTGACTGTGGCCTCACGGGTGATTGGAAGGCTCCC
AGCAGTGACCATGGCCACTTTGGGGAAGAAGATCCAAGGTCTCCTGACCAGACACCTTAGACCT
GAGAGCCGTTGCACCAGAGCAGACCAGGGAGATGCCTCCTTGGTAACATGTAGGGACAGCAAAG
ATGCTATGCCTAGGATTCTGTGTAGCTCTTTCACACACATGTGTGTGCTCATCGCCCATGGCCT
GTGTTTCCTCACAATAAGCAGTGGTATTGGCAGGCACAGTAGCAGCTCAAGGAGTCTGTGTTAT
TCAAGACAGGCATGAGACACTGGAAAAAAGATGCTGGTGTGTTTGGATGGGCTGGGCACTGTGG
GGAGGTCCAGTGCTCAGGACAGATGATGCTGTCAGAGTGTGGGGGACGGAGGGGTGTGCACTAC
TGCCTCTCCCCCTCAGTGGGGACTCACAGTAGCAATGAGAGAGAAAGAGGGTGTTCAGGTAAGA
CTTGTTCGAATGCTGTGGAGATGAGCTTGGTGAGGCAGGGCGATGATAGCCTCATGGTTAGGAG
TCTGGCCACGACTCTGGGCTCTCACGCCCTCCATGCCGAGTTCTCACCATTCGGGCTGCGTCTG
GCTCAGGAAACACTGCAGAGGTGGGAACACAGAAATCTGCTTTGGAAGGAAACGTTAGTGAACA
CTAAGAGGGCAGGTGTCTTCGTTTATTCTCAGGACCTTTTTTGTAACAGGGCTACATTCTGCAA
ACTGCTCACAAAAGACTAAGCCACTGAATCCTCCCACTTTGGGCCTGTTTTAGTAATGGCAGAA
GAATCCCTGAGCAGATTTGGGGCCCTAGATCATTAGGGTGCTAGTGCTTTGGAACTTTCTCTCC
CTCCCCATCCCAGCCTTTCCCTTGCACCCCCCCAGCAAATAGATGTCTTTCCCCATTGGGCCTG
GTGAGCACCACTGGACAAGTGACTCTGTTCACAGATGACTGGGGTCTCCAGGCCTGAGGGCAAG
GACGGCTTTATATACCTCTTCCTTAGTCACGCAAGTCCACGTTTCTGCGGTGGGGTGAAGGCCC
TAGCAGAGGCTCTGAGCCCACGCGACGTGCGCAGTGGGGACTGTTCGGCAGGTAGCAGCGACTC
CTCCCCCGTCCGTCGCTGTGGCACTGTGTGGTGGCGATACTTCTGCGAGTTCCAGATGTTTGCA
CATGTGGTTTTATGCATTATCAAAATTACTGCTGCCTTGAATGAAACATTCTGTGAAAGTTTTT
GCAAAAGCTTTACTAGTTTTTTTTTTATTGTGAAATTTTGTAAAGGCAGGAAATGGATTAAGAC
AAGCATGCTAAATATATTTTTCAGAAAAAAAGCAATAATTTTACATGTACAGAAATTATCCTAA
CCTTTAATACTGGTGAGAGCGACAGTTTACTTAACCCAGCAATGGATCAGTGCGGTTTCTGTAG
GAAATGGGCTTCTGATACAAAGACTTGTTTCAACACACATGTATACATGAATCCTGGCGTGTGG
TTTCTCTGTTCTAATGATCTGTTGGATTATTATTATTATATTATTATTATTGTTATTGTTATTG
TTAGCTGATGTTTGGTTCCAGATTCTATTTGTCACTGTTTTAATTACTTGACTGTTCAGGTGAC
TGCTGCACTTGCAAGAATGCAGTGCTAACTGGCTAGCAGATGCGTATATATACATATATACGTA
TATATATATATGCTAACTGGCTAGCAGATGCGTATATATACATATATACATATATATGTGTGTG
TATATATATATACTAACTGGCTAGCAGATACGGTTATATACATATATACGTATATATATACTAA
CTGGCTAGCAGATGCGTATATATACATATATACGTATATATATATAATTATTTTTTTTTACTTA
TTTTTTCCTGATACTCCTACACCAGGTATGTATGAGAACGGTTTGCCATGCTGAGTGCTTGGGA
ATATCAGTCATTCTGAGACGTACATGGAGCAGACCGCAGAGACGCATTCCTCTCTCCTCCTGAG
GCAGCGTAGTTCCTTTCTGTTGAGCTTGTCTGCTCATTATGATAGGCTCCCCATCTGTCTGCAT
TTTCTGGCTTTTTGTTTCCTTGGCTGGAAGTAAAGGTGAGAGCTAGGAATGTCAGGGCCTGTGA
TTCGGCCCCATCTATTCTGTGTCTTAGTTATTAAACAGTTCTGTACACAAAGGGACACGAAGGT
GTCGTTTGCGTTTTTACTGTGTCTGAAGCTGCACGTGGCATTGAGAACTGGAAGGTCTGTCTTC
CGGTGAGTCTCCCTCCCAGGGTCTGGCAGGGGGAAGGGGTGCCTGAGGTCCCTGCAGCTGACCG
TTTGCCTGGAGAGTAGCCAATCTCAGGACGACCTGCCCCTCGAAGCACAGAGATACAGTTTCCT
GTAGCCACAAGGCCACGAGGTCCCCAGTGCTCGCCTCTCTGGGACCAGCTGCGTGCTGGCCTGG
TGCATGGCTTTTCTGTCTCACTGGCCATCAGTATTGGACTGCTTTGTTAATTTGTTTATGTCAG
CTCAACAATAGTATTTAATATGATTTGTTTCCTTATTTATTTAGCCAATCTGTTTTGATTTGTC
CCCCAACCCCTGCTGCCCCTGTGGTAATTTCCACATTTCTGACTGTTACAGACTTCCTACTACC
TCTACGAATCTTCTGTCTCCTTGTTTCCTGATGGGGTTTTTACAGTGTTGCGTCTAATGTAACT
TAGACAATAAAGGGTTTGGTTGTCTACACTGCACCGCTCTCTGTGTCCCCTGCCCTCTCCACCT
GCGTTCTTCTGACTCCTGCCTCACTCAGCTCAGCCCCACCATCCTCTGCTTTACTGTGTGACGT
GTCTTCTCTTATACTTCCTCTTCCTGTCCATGCGCATCACACATGCTGGGTCTCTCAGGACAGT
TCAGGTGATTTACTTGTTCTGAACGCAGAGAGTGAAGACTCAGATAATAATAAATGCGTCGTGG
GCTCTGTCTCCTCTGGGGAGCTGCTCACTGCACCTTCCCACACTTCTGCTGGCCCTGGAAGTCT
CTTCAGTCTTAGATGGAGACAGTTTAGCCTCTCCTGCACAGTACAATTTCCAAGTCAAGTGGAC
TTGGCCTCTTTTGTTCTGAAAAGTATTAGATATTTTAAGAAGTTCCCCAATATTTGCTTATTTA
TTTTTTTTAAAGCCCAGGAAGACACTGGTTTCTGGAAATTAGGCGTTCCAGGCAACACAAGGCT
ACTCCATAAAACTAAAAGAGCTCTGCTGTCCCGGTGGGCTGCAGGGGAGTCCCTTCCCTTTGGC
TGCTGTGTACCCACCCAGATTCTCTTGCAGCTGGCACTGGGGTCTTCACACTCCTTCTACCCCC
ACAGGTGACCAGTTCCACGTCGGGCATCACGGGGCTGGCAGTGGCGGTCTTTCCACCTCCTGGT
AACCAGGAGAGTTGACACCTTTGGGTGGGTAAGGGTGCCTTCTAGGTCAAACAGTGAACGCAGT
TCCCCAGGAAGGAAACATTCTCTGGACCTGTAAGACAAGACCCTCGCCGCCAGCACCTGAGGAA
CATGTTTTGTTGTTTAACGCTTATAAATCAGGCAACTTCTAATTGCAACTTATATTCACCGAGA
AAAAAAAGACACACGCCCCACAGACAGGGCCTTCCCGTGACACGTTTTTGACACTAATGACTAA
TACAAACTGCAGAGTCCTGGGACATACCCGTGTGAAGTGACCGCCAAGCAATGCGTTCTGTCTT
CACCAACTCCGCTAATCATTCGTTGAGCTGGGAAGATGCAGAAGCCCATAGAATTTGTACTTCT
TCTTTTTAAAAAAAAAACCCACAATTTATAATGCTATATTTTGTACTCTTTATACTAGAATTTG
TTACTAGATTGATGTATTTAACTATTTCTGAGAAAAAGTAATTCAATGTTACAGCTGTGTGATT
AAAAAGTATTTAGATAAAACATATTCACTATTGGAATTTGAAATAAATAAAAACATCTTGGAGT
TGCAAG

hide sequence

RefSeq Acc Id:

XM_017600871 ⟹ XP_017456360

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	76,302,553 - 76,386,526 (+)	NCBI
Rnor_6.0	18	79,773,741 - 79,857,909 (+)	NCBI

Sequence:

show sequence

CCGGGGGAGGGGGGGGGGCTCTGTGGTCTAATCGATGCCTGGGTGGAGAGGAGGCCCGAGTGGA
CGTTGGGTTATTTCTAGAAGCCCAGATGTGCCCTTGGGCTGGGGCGGGCCTTCCAGGGTGTCCA
TGGAGTAACAAAGGACCGAGTGCTTGAACCTCTGGTCCACTCGCGGTGCCCACTTAACCAGCAA
GTCTCGGAAGGAACTTTAGACGGCGTCTTAATTAAAGGTGCTTGCTGCATCTGCCACACCACAG
AATGCACCTTCTCCTCAGAAGCACCTCTCTCCCCTCTGGGCAGCAGGAACCCCTCTCAAAATGA
AGAGATAAGACTCTTCCGGCCCCTACGACCCAAGGCTGTGCTGTGACACCCACACCGCCCTAAT
GGATCGCAGCAGAGAGGCTGAGATGGAGCTGAGGAGAGGACCCAGCCCACCCAGGGCTGGCAGG
AGCCACGAAGTGGACGGGGACAAGGCCGCCTGCCACAGCTGTTGCATCTGCGGCAAGAGCTTTC
CTTTCCAGAGCTCCCTGTCCCAGCATATGCGCAAGCACACAGGAGAGAAGCCCTACAAGTGTCC
CTACTGTGACCACAGGGCTTCCCAGAAGGGCAACCTCAAGATTCACATCCGCAGCCACCGGACG
GGGACTCTGATCCAGGGGCACGAGCCAGAGGTGGGAGAGGCTCAGCTGGGAGAGCTGCGTGTCT
CCGAGGGCCTGGATGGGTGTGCCAGCCCCACCAAGAGCACCTCTGCCTGCAACCGCGTGCTGAA
TGGGGCCGTGCCAACGGATGGCAGCAAGATTCTGCTCAGGAGCAGCCGCAAGGAAGCAGAGGGC
GCAGCCAGCGCCCAGGAAGACGCCGAGGCTATGGTGCAGTGCTCCTTCTGTAAGAGCCGGTTTG
AGCGTAAGAAGGACCTGGAGCTGCACGTGCACCAAGCCCACAAGCCATTCAAGTGCAGGCTGTG
CAGCTATGTCACCCTGCGGGAGGAGTCTCTGCTCAGCCACATCGAGAGGGACCACATCACTGCA
CAGGTGCCCAATGGCAGCGAGGCCTGTGTGGAGAACGGCAAGCCTGAGCTGAGCCCTGGGGAAT
TTCCCTGCGAGGTGTGTGGCCAGGCCTTCAGCCAGACCTGGTTCCTGAAGGCACACATGAAGAA
ACACCGCGGCTCCTTTGACCATGGCTGCCACATCTGTGGCCGGAGATTCAAAGAGCCCTGGTTC
CTCAAGAACCACATGAAGGCGCATGGACCCAAGGCAGGAAGCAAGAACAGGCCCAAGAGTGACC
TGGACCCCATTGCTACCATCAACAACGTGGTACAGGAGGAGGTCATTGTCACCGGCCTGTCCCT
CTATGAGATCTGCACGAAGTGCGGGAACCTGTTTACAGACCTGGACAGCTTGAACGCCCACAAC
ACCGTGCACCGTAAAGTTGAAGCCAGCCGGAACCCAGCCCCGGCCGAGGAAGGGGATACAGAAG
ACCCCCCAGACACCAAGCAGTTCTTCTTACAGTGCCTGAACCTGACACCATGTGTGGCTGGCGA
CGTGTCCCCCAGTGGGCAGGCTGGACGGCGAGTGGCAGAGTTGGACCCTGTCAACAGCTATCAG
GCCTGGCAGCTGGCCACCAGGGGGAAGGTGGCCGAGCCGGCTGAGTACCTCAAGTACGGGACTT
GGGACGAGGCGCTGGCCGGGGATGTCGCCTTTGACAAAGACAAGCGTGAGTATATACTGGTGAG
TCAGGAGAAACGCAAGCGTGAATCGGATGCTCCTTCTACCCAGGCTCCCCCAAGGAAGAGGGCC
AGTGTACCTGGGGACCCCATGCTTTCTGGACACCTTGACCCCCGGCCAGCCTCACGCCCCAACC
GCAGGGCTGCGGCCACCACTGGCCAGGGGAAGTCCTCTGAGTGCTTCGAGTGCGGCAAGATCTT
CCGCACCTACCACCAGATGGTGCTCCACTCCCGTGTGCACCGCCGCGCACGCCGTGACAGGGAT
CCTGAAGGGGACCGGGCAGTACGTGCCCGCTGCGGTTCACTCAGCGAGGGTGATTCGGCGTCCC
AGCCAAGCAGCCCTGGCTCAGCCTGTGCCACTGCTGACTCCCCTGGCCTGGCGGAAGAAGTGGT
GGACGATAGTGGTGAAGAGGCGGTGTCTGAACCCGCATCAGGAGGCCAACCAGGACACTGCTGC
TCTTCTGGAGAGGTGGCACCCATCCTGCTCTCCAACGGAGACCCGAGTCACAAACTTGGAAATA
ACCTGCCAGAGGAAGACATCAGCGAGCCCACGGTGGGGATCGCCACGCCGTCTGTGTCCATACT
TGAAAACAGCAGCAGAGAGACCACCAAGGGTCCCGAGCAGCATAGACATTCCCTTGACTTAAAG
ATGCCAGCATTTCACCCCAGGCAGGAAGCCAGCACGCCCGAGCGGGTAGACTTCCCCTCGAGCA
TGGAAATAGCCAGCCTGCAGCACACCTTGGACAGCCAAGCTGGGCATTCGAAAGAAAAGCTGTC
CGATTTGCACAAGGAGCACTGTGGGGTAGGGAAGCGGGCATCTGCCCCTGACCTGGTCCCGTTG
GACTTGAGCATGAAGTCGAGCCGGGAAGACCCCAGCAGTAAGGAAGCCAGCTCCCTGCAGACCG
CCCTAGTCATTCACCCGTGTCCTTACTGTAACCACAAGACCTACTACCCCGAGGTCCTGTGGAT
GCACAAGCGCATCTGGCACAGGATCAGCTGCGGCTCTATAGCCCCTCCTTGGACTCAGCCCAGT
GGCCACAAGAGCATCTGCAGCAACCTGGCTTTCCTCGCCCGCAGTGGGCGCACAGGGCCCCCGC
CTGCTCTCGGGGGCAAGGACTGCCAGCCCCTGCTCCTTGCTCGTTTTACCCGCACCCAGGTGCC
AGGTGGGGTACCAGGATCAAAGGGCAGCTCTTCTCCCCTTGGGGTGACCACAAAAGCCGCTAGC
ATACCTAAGAACAAGGAGAGCCCTTCTGGGGGCCCCTGCGCTCCGTGGGCCCCTGGCCCCGATG
GGTATCGGCAGACCAGAGCCGGCCATGGCCAGGATCCACCTAGTGCTGCAGTGCAGGGACCCCT
GCCCAAGCCCAAACAGGAGGCTAGCTCCAGGCTGGCACCTTCCCCAGGCAGTGGGGGCCTCAGC
AGAAGTGCCACCCCTACACCCTCAGTTATAACCCGTGTTGGTGCCCAGCCCTCAGCCAACAGCA
AGCCAGTGGAGAAACTCGGGGTCCCGGCAGTGGGGACTGGCTTTACCCCTCCGAATAAGCACAG
TGCCCCAGACTCTCTGAAAGCCAAATTCAGTCCTCAGCCTCAGGGTCAGCCTCCCTCGAAAGGT
GAAGGAGGCTCTCCTCTACCTCCCCGAGAAGCCCCTGTGAAGCCGGCCCAGGAGCTGCGAACGC
TAGCCACGTGTGCAGCAGGGCCCCGAGGGGACGCAGCCTTGCAGGCTCCGCCCGGCGCGCCTCC
CACCTTACACTCCATCCAGCAGGAGCCGGCGGCAGCCGAGGGCCAGGAGAAGCGCCTGGACATC
CTCAGTATCTTTAAGTACATTCCAAAGGACTTCGCCACACTCTACCAGGGCTGGGGTGTCAGCA
GCCCTGGGCCTGAGCACAGAGGGACACCGCGGACACAGGCCCGCCAGGGAGACTTTGTCTGTGT
GGAGTGCGGCAAGAGTTTCCACCAGCCCAGCCAACTCAGGGCCCACCTTCGGGCACACACAGGG
GAGAGACCACACTGCCCCAGGGACTGTGCCGGCAGGGCCCCTCCGAAAGGGGACCTAGAGACAC
ACCTCCAGCACCCAGCCCGTGATAGTGTTGACTGTGGCCTCACGGGTGATTGGAAGGCTCCCAG
CAGTGACCATGGCCACTTTGGGGAAGAAGATCCAAGGTCTCCTGACCAGACACCTTAGACCTGA
GAGCCGTTGCACCAGAGCAGACCAGGGAGATGCCTCCTTGGTAACATGTAGGGACAGCAAAGAT
GCTATGCCTAGGATTCTGTGTAGCTCTTTCACACACATGTGTGTGCTCATCGCCCATGGCCTGT
GTTTCCTCACAATAAGCAGTGGTATTGGCAGGCACAGTAGCAGCTCAAGGAGTCTGTGTTATTC
AAGACAGGCATGAGACACTGGAAAAAAGATGCTGGTGTGTTTGGATGGGCTGGGCACTGTGGGG
AGGTCCAGTGCTCAGGACAGATGATGCTGTCAGAGTGTGGGGGACGGAGGGGTGTGCACTACTG
CCTCTCCCCCTCAGTGGGGACTCACAGTAGCAATGAGAGAGAAAGAGGGTGTTCAGGTAAGACT
TGTTCGAATGCTGTGGAGATGAGCTTGGTGAGGCAGGGCGATGATAGCCTCATGGTTAGGAGTC
TGGCCACGACTCTGGGCTCTCACGCCCTCCATGCCGAGTTCTCACCATTCGGGCTGCGTCTGGC
TCAGGAAACACTGCAGAGGTGGGAACACAGAAATCTGCTTTGGAAGGAAACGTTAGTGAACACT
AAGAGGGCAGGTGTCTTCGTTTATTCTCAGGACCTTTTTTGTAACAGGGCTACATTCTGCAAAC
TGCTCACAAAAGACTAAGCCACTGAATCCTCCCACTTTGGGCCTGTTTTAGTAATGGCAGAAGA
ATCCCTGAGCAGATTTGGGGCCCTAGATCATTAGGGTGCTAGTGCTTTGGAACTTTCTCTCCCT
CCCCATCCCAGCCTTTCCCTTGCACCCCCCCAGCAAATAGATGTCTTTCCCCATTGGGCCTGGT
GAGCACCACTGGACAAGTGACTCTGTTCACAGATGACTGGGGTCTCCAGGCCTGAGGGCAAGGA
CGGCTTTATATACCTCTTCCTTAGTCACGCAAGTCCACGTTTCTGCGGTGGGGTGAAGGCCCTA
GCAGAGGCTCTGAGCCCACGCGACGTGCGCAGTGGGGACTGTTCGGCAGGTAGCAGCGACTCCT
CCCCCGTCCGTCGCTGTGGCACTGTGTGGTGGCGATACTTCTGCGAGTTCCAGATGTTTGCACA
TGTGGTTTTATGCATTATCAAAATTACTGCTGCCTTGAATGAAACATTCTGTGAAAGTTTTTGC
AAAAGCTTTACTAGTTTTTTTTTTATTGTGAAATTTTGTAAAGGCAGGAAATGGATTAAGACAA
GCATGCTAAATATATTTTTCAGAAAAAAAGCAATAATTTTACATGTACAGAAATTATCCTAACC
TTTAATACTGGTGAGAGCGACAGTTTACTTAACCCAGCAATGGATCAGTGCGGTTTCTGTAGGA
AATGGGCTTCTGATACAAAGACTTGTTTCAACACACATGTATACATGAATCCTGGCGTGTGGTT
TCTCTGTTCTAATGATCTGTTGGATTATTATTATTATATTATTATTATTGTTATTGTTATTGTT
AGCTGATGTTTGGTTCCAGATTCTATTTGTCACTGTTTTAATTACTTGACTGTTCAGGTGACTG
CTGCACTTGCAAGAATGCAGTGCTAACTGGCTAGCAGATGCGTATATATACATATATACGTATA
TATATATATGCTAACTGGCTAGCAGATGCGTATATATACATATATACATATATATGTGTGTGTA
TATATATATACTAACTGGCTAGCAGATACGGTTATATACATATATACGTATATATATACTAACT
GGCTAGCAGATGCGTATATATACATATATACGTATATATATATAATTATTTTTTTTTACTTATT
TTTTCCTGATACTCCTACACCAGGTATGTATGAGAACGGTTTGCCATGCTGAGTGCTTGGGAAT
ATCAGTCATTCTGAGACGTACATGGAGCAGACCGCAGAGACGCATTCCTCTCTCCTCCTGAGGC
AGCGTAGTTCCTTTCTGTTGAGCTTGTCTGCTCATTATGATAGGCTCCCCATCTGTCTGCATTT
TCTGGCTTTTTGTTTCCTTGGCTGGAAGTAAAGGTGAGAGCTAGGAATGTCAGGGCCTGTGATT
CGGCCCCATCTATTCTGTGTCTTAGTTATTAAACAGTTCTGTACACAAAGGGACACGAAGGTGT
CGTTTGCGTTTTTACTGTGTCTGAAGCTGCACGTGGCATTGAGAACTGGAAGGTCTGTCTTCCG
GTGAGTCTCCCTCCCAGGGTCTGGCAGGGGGAAGGGGTGCCTGAGGTCCCTGCAGCTGACCGTT
TGCCTGGAGAGTAGCCAATCTCAGGACGACCTGCCCCTCGAAGCACAGAGATACAGTTTCCTGT
AGCCACAAGGCCACGAGGTCCCCAGTGCTCGCCTCTCTGGGACCAGCTGCGTGCTGGCCTGGTG
CATGGCTTTTCTGTCTCACTGGCCATCAGTATTGGACTGCTTTGTTAATTTGTTTATGTCAGCT
CAACAATAGTATTTAATATGATTTGTTTCCTTATTTATTTAGCCAATCTGTTTTGATTTGTCCC
CCAACCCCTGCTGCCCCTGTGGTAATTTCCACATTTCTGACTGTTACAGACTTCCTACTACCTC
TACGAATCTTCTGTCTCCTTGTTTCCTGATGGGGTTTTTACAGTGTTGCGTCTAATGTAACTTA
GACAATAAAGGGTTTGGTTGTCTACACTGCACCGCTCTCTGTGTCCCCTGCCCTCTCCACCTGC
GTTCTTCTGACTCCTGCCTCACTCAGCTCAGCCCCACCATCCTCTGCTTTACTGTGTGACGTGT
CTTCTCTTATACTTCCTCTTCCTGTCCATGCGCATCACACATGCTGGGTCTCTCAGGACAGTTC
AGGTGATTTACTTGTTCTGAACGCAGAGAGTGAAGACTCAGATAATAATAAATGCGTCGTGGGC
TCTGTCTCCTCTGGGGAGCTGCTCACTGCACCTTCCCACACTTCTGCTGGCCCTGGAAGTCTCT
TCAGTCTTAGATGGAGACAGTTTAGCCTCTCCTGCACAGTACAATTTCCAAGTCAAGTGGACTT
GGCCTCTTTTGTTCTGAAAAGTATTAGATATTTTAAGAAGTTCCCCAATATTTGCTTATTTATT
TTTTTTAAAGCCCAGGAAGACACTGGTTTCTGGAAATTAGGCGTTCCAGGCAACACAAGGCTAC
TCCATAAAACTAAAAGAGCTCTGCTGTCCCGGTGGGCTGCAGGGGAGTCCCTTCCCTTTGGCTG
CTGTGTACCCACCCAGATTCTCTTGCAGCTGGCACTGGGGTCTTCACACTCCTTCTACCCCCAC
AGGTGACCAGTTCCACGTCGGGCATCACGGGGCTGGCAGTGGCGGTCTTTCCACCTCCTGGTAA
CCAGGAGAGTTGACACCTTTGGGTGGGTAAGGGTGCCTTCTAGGTCAAACAGTGAACGCAGTTC
CCCAGGAAGGAAACATTCTCTGGACCTGTAAGACAAGACCCTCGCCGCCAGCACCTGAGGAACA
TGTTTTGTTGTTTAACGCTTATAAATCAGGCAACTTCTAATTGCAACTTATATTCACCGAGAAA
AAAAAGACACACGCCCCACAGACAGGGCCTTCCCGTGACACGTTTTTGACACTAATGACTAATA
CAAACTGCAGAGTCCTGGGACATACCCGTGTGAAGTGACCGCCAAGCAATGCGTTCTGTCTTCA
CCAACTCCGCTAATCATTCGTTGAGCTGGGAAGATGCAGAAGCCCATAGAATTTGTACTTCTTC
TTTTTAAAAAAAAAACCCACAATTTATAATGCTATATTTTGTACTCTTTATACTAGAATTTGTT
ACTAGATTGATGTATTTAACTATTTCTGAGAAAAAGTAATTCAATGTTACAGCTGTGTGATTAA
AAAGTATTTAGATAAAACATATTCACTATTGGAATTTGAAATAAATAAAAACATCTTGGAGTTG
CAAGA

hide sequence

RefSeq Acc Id:

XM_039096626 ⟹ XP_038952554

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	76,286,453 - 76,386,526 (+)	NCBI

RefSeq Acc Id:

XM_039096627 ⟹ XP_038952555

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	76,302,364 - 76,386,526 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001178624	(Get FASTA)	NCBI Sequence Viewer
	NP_001399386	(Get FASTA)	NCBI Sequence Viewer
	XP_008770321	(Get FASTA)	NCBI Sequence Viewer
	XP_008770322	(Get FASTA)	NCBI Sequence Viewer
	XP_017456357	(Get FASTA)	NCBI Sequence Viewer
	XP_017456359	(Get FASTA)	NCBI Sequence Viewer
	XP_017456360	(Get FASTA)	NCBI Sequence Viewer
	XP_038952554	(Get FASTA)	NCBI Sequence Viewer
	XP_038952555	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL75198	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001178624 ⟸ NM_001191695
- Peptide Label:	isoform 1
- UniProtKB:	D4A239 (UniProtKB/TrEMBL), A6K5K2 (UniProtKB/TrEMBL), A0A0G2K242 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDRSREAEMELRRGPSPPRAGRSHEVDGDKAACHSCCICGKSFPFQSSLSQHMRKHTGEKPYKC PYCDHRASQKGNLKIHIRSHRTGTLIQGHEPEVGEAQLGELRVSEGLDGCASPTKSTSACNRVL NGAVPTDGSKILLRSSRKEAEGAASAQEDAEAMVQCSFCKSRFERKKDLELHVHQAHKPFKCRL CSYVTLREESLLSHIERDHITAQVPNGSEACVENGKPELSPGEFPCEVCGQAFSQTWFLKAHMK KHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPKSDLDPIATINNVVQEEVIVTGLS LYEICTKCGNLFTDLDSLNAHNTVHRKVEASRNPAPAEEGDTEDPPDTKQFFLQCLNLTPCVAG DVSPSGQAGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYGTWDEALAGDVAFDKDKREYILV SQEKRKRESDAPSTQAPPRKRASVPGDPMLSGHLDPRPASRPNRRAAATTGQGKSSECFECGKI FRTYHQMVLHSRVHRRARRDRDPEGDRAVRARCGSLSEGDSASQPSSPGSACATADSPGLAEEV VDDSGEEAVSEPASGGQPGHCCSSGEVAPILLSNGDPSHKLGNNLPEEDISEPTVGIATPSVSI LENSSRETTKGPEQHRHSLDLKMPAFHPRQEASTPERVDFPSSMEIASLQHTLDSQAGHSKEKL SDLHKEHCGVGKRASAPDLVPLDLSMKSSREDPSSKEASSLQTALVIHPCPYCNHKTYYPEVLW MHKRIWHRISCGSIAPPWTQPSGHKSICSNLAFLARSGRTGPPPALGGKDCQPLLLARFTRTQV PGGVPGSKGSSSPLGVTTKAASIPKNKESPSGGPCAPWAPGPDGYRQTRAGHGQDPPSAAVQGP LPKPKQEASSRLAPSPGSGGLSRSATPTPSVITRVGAQPSANSKPVEKLGVPAVGTGFTPPNKH SAPDSLKAKFSPQPQGQPPSKGEGGSPLPPREAPVKPAQELRTLATCAAGPRGDAALQAPPGAP PTLHSIQQEPAAAEGQEKRLDILSIFKYIPKDFATLYQGWGVSSPGPEHRGTPRTQARQGDFVC VECGKSFHQPSQLRAHLRAHTVVFECDSPRGSEVHTASTDTPKQGRDHTAPGTVPAGPLRKGT hide sequence

RefSeq Acc Id:	XP_008770321 ⟸ XM_008772099
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K242 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDRSREAEMELRRGPSPPRAGRSHEVDGDKAACHSCCICGKSFPFQSSLSQHMRKHTGEKPYKC PYCDHRASQKGNLKIHIRSHRTGTLIQGHEPEVGEAQLGELRVSEGLDGCASPTKSTSACNRVL NGAVPTDGSKILLRSSRKEAEGAASAQEDAEAMVQCSFCKSRFERKKDLELHVHQAHKPFKCRL CSYVTLREESLLSHIERDHITAQVPNGSEACVENGKPELSPGEFPCEVCGQAFSQTWFLKAHMK KHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPKSDLDPIATINNVVQEEVIVTGLS LYEICTKCGNLFTDLDSLNAHNTVHRKVEASRNPAPAEEGDTEDPPDTKQFFLQCLNLTPCVAG DVSPSGQAGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYGTWDEALAGDVAFDKDKREYILV SQEKRKRESDAPSTQAPPRKRASVPGDPMLSGHLDPRPASRPNRRAAATTGQGKSSECFECGKI FRTYHQMVLHSRVHRRARRDRDPEGDRAVRARCGSLSEGDSASQPSSPGSACATADSPGLAEEV VDDSGEEAVSEPASGGQPGHCCSSGEVAPILLSNGDPSHKLGNNLPEEDISEPTVGIATPSVSI LENSSRETTKGPEQHRHSLDLKMPAFHPRQEASTPERVDFPSSMEIASLQHTLDSQAGHSKEKL SDLHKEHCGVGKRASAPDLVPLDLSMKSSREDPSSKEASSLQTALVIHPCPYCNHKTYYPEVLW MHKRIWHRISCGSIAPPWTQPSGHKSICSNLAFLARSGRTGPPPALGGKDCQPLLLARFTRTQV PGGVPGSKGSSSPLGVTTKAASIPKNKESPSGGPCAPWAPGPDGYRQTRAGHGQDPPSAAVQGP LPKPKQEASSRLAPSPGSGGLSRSATPTPSVITRVGAQPSANSKPVEKLGVPAVGTGFTPPNKH SAPDSLKAKFSPQPQGQPPSKGEGGSPLPPREAPVKPAQELRTLATCAAGPRGDAALQAPPGAP PTLHSIQQEPAAAEGQEKRLDILSIFKYIPKDFATLYQGWGVSSPGPEHRGTPRTQARQGDFVC VECGKSFHQPSQLRAHLRAHTGERPHCPRDCAGRAPPKGDLETHLQHPARDSVDCGLTGDWKAP SSDHGHFGEEDPRSPDQTP hide sequence

RefSeq Acc Id:	XP_008770322 ⟸ XM_008772100
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K242 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDRSREAEMELRRGPSPPRAGRSHEVDGDKAACHSCCICGKSFPFQSSLSQHMRKHTGEKPYKC PYCDHRASQKGNLKIHIRSHRTGTLIQGHEPEVGEAQLGELRVSEGLDGCASPTKSTSACNRVL NGAVPTDGSKILLRSSRKEAEGAASAQEDAEAMVQCSFCKSRFERKKDLELHVHQAHKPFKCRL CSYVTLREESLLSHIERDHITAQVPNGSEACVENGKPELSPGEFPCEVCGQAFSQTWFLKAHMK KHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPKSDLDPIATINNVVQEEVIVTGLS LYEICTKCGNLFTDLDSLNAHNTVHRKVEASRNPAPAEEGDTEDPPDTKQFFLQCLNLTPCVAG DVSPSGQAGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYGTWDEALAGDVAFDKDKREYILV SQEKRKRESDAPSTQAPPRKRASVPGDPMLSGHLDPRPASRPNRRAAATTGQGKSSECFECGKI FRTYHQMVLHSRVHRRARRDRDPEGDRAVRARCGSLSEGDSASQPSSPGSACATADSPGLAEEV VDDSGEEAVSEPASGGQPGHCCSSGEVAPILLSNGDPSHKLGNNLPEEDISEPTVGIATPSVSI LENSSRETTKGPEQHRHSLDLKMPAFHPRQEASTPERVDFPSSMEIASLQHTLDSQAGHSKEKL SDLHKEHCGVGKRASAPDLVPLDLSMKSSREDPSSKEASSLQTALVIHPCPYCNHKTYYPEVLW MHKRIWHRISCGSIAPPWTQPSGHKSICSNLAFLARSGRTGPPPALGGKDCQPLLLARFTRTQV PGGVPGSKGSSSPLGVTTKAASIPKNKESPSGGPCAPWAPGPDGYRQTRAGHGQDPPSAAVQGP LPKPKQEASSRLAPSPGSGGLSRSATPTPSVITRVGAQPSANSKPVEKLGVPAVGTGFTPPNKH SAPDSLKAKFSPQPQGQPPSKGEGGSPLPPREAPVKPAQELRTLATCAAGPRGDAALQAPPGAP PTLHSIQQEPAAAEGQEKRLDILSIFKYIPKDFATLYQGWGVSSPGPEHRGERPHCPRDCAGRA PPKGDLETHLQHPARDSVDCGLTGDWKAPSSDHGHFGEEDPRSPDQTP hide sequence

RefSeq Acc Id:	XP_017456357 ⟸ XM_017600868
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K242 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDRSREAEMELRRGPSPPRAGRSHEVDGDKAACHSCCICGKSFPFQSSLSQHMRKHTGEKPYKC PYCDHRASQKGNLKIHIRSHRTGTLIQGHEPEVGEAQLGELRVSEGLDGCASPTKSTSACNRVL NGAVPTDGSKILLRSSRKEAEGAASAQEDAEAMVQCSFCKSRFERKKDLELHVHQAHKPFKCRL CSYVTLREESLLSHIERDHITAQVPNGSEACVENGKPELSPGEFPCEVCGQAFSQTWFLKAHMK KHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPKSDLDPIATINNVVQEEVIVTGLS LYEICTKCGNLFTDLDSLNAHNTVHRKVEASRNPAPAEEGDTEDPPDTKQFFLQCLNLTPCVAG DVSPSGQAGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYGTWDEALAGDVAFDKDKREYILV SQEKRKRESDAPSTQAPPRKRASVPGDPMLSGHLDPRPASRPNRRAAATTGQGKSSECFECGKI FRTYHQMVLHSRVHRRARRDRDPEGDRAVRARCGSLSEGDSASQPSSPGSACATADSPGLAEEV VDDSGEEAVSEPASGGQPGHCCSSGEVAPILLSNGDPSHKLGNNLPEEDISEPTVGIATPSVSI LENSSRETTKGPEQHRHSLDLKMPAFHPRQEASTPERVDFPSSMEIASLQHTLDSQAGHSKEKL SDLHKEHCGVGKRASAPDLVPLDLSMKSSREDPSSKEASSLQTALVIHPCPYCNHKTYYPEVLW MHKRIWHRISCGSIAPPWTQPSGHKSICSNLAFLARSGRTGPPPALGGKDCQPLLLARFTRTQV PGGVPGSKGSSSPLGVTTKAASIPKNKESPSGGPCAPWAPGPDGYRQTRAGHGQDPPSAAVQGP LPKPKQEASSRLAPSPGSGGLSRSATPTPSVITRVGAQPSANSKPVEKLGVPAVGTGFTPPNKH SAPDSLKAKFSPQPQGQPPSKGEGGSPLPPREAPVKPAQELRTLATCAAGPRGDAALQAPPGAP PTLHSIQQEPAAAEGQEKRLDILSIFKYIPKDFATLYQGWGVSSPGPEHRGTPRTQARQGDFVC VECGKSFHQPSQLRAHLRAHTGERPHCPRDCAGRAPPKGDLETHLQHPARDSVDCGLTGDWKAP SSDHGHFGEEDPRSPDQTP hide sequence

RefSeq Acc Id:	XP_017456359 ⟸ XM_017600870
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K242 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDRSREAEMELRRGPSPPRAGRSHEVDGDKAACHSCCICGKSFPFQSSLSQHMRKHTGEKPYKC PYCDHRASQKGNLKIHIRSHRTGTLIQGHEPEVGEAQLGELRVSEGLDGCASPTKSTSACNRVL NGAVPTDGSKILLRSSRKEAEGAASAQEDAEAMVQCSFCKSRFERKKDLELHVHQAHKPFKCRL CSYVTLREESLLSHIERDHITAQVPNGSEACVENGKPELSPGEFPCEVCGQAFSQTWFLKAHMK KHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPKSDLDPIATINNVVQEEVIVTGLS LYEICTKCGNLFTDLDSLNAHNTVHRKVEASRNPAPAEEGDTEDPPDTKQFFLQCLNLTPCVAG DVSPSGQAGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYGTWDEALAGDVAFDKDKREYILV SQEKRKRESDAPSTQAPPRKRASVPGDPMLSGHLDPRPASRPNRRAAATTGQGKSSECFECGKI FRTYHQMVLHSRVHRRARRDRDPEGDRAVRARCGSLSEGDSASQPSSPGSACATADSPGLAEEV VDDSGEEAVSEPASGGQPGHCCSSGEVAPILLSNGDPSHKLGNNLPEEDISEPTVGIATPSVSI LENSSRETTKGPEQHRHSLDLKMPAFHPRQEASTPERVDFPSSMEIASLQHTLDSQAGHSKEKL SDLHKEHCGVGKRASAPDLVPLDLSMKSSREDPSSKEASSLQTALVIHPCPYCNHKTYYPEVLW MHKRIWHRISCGSIAPPWTQPSGHKSICSNLAFLARSGRTGPPPALGGKDCQPLLLARFTRTQV PGGVPGSKGSSSPLGVTTKAASIPKNKESPSGGPCAPWAPGPDGYRQTRAGHGQDPPSAAVQGP LPKPKQEASSRLAPSPGSGGLSRSATPTPSVITRVGAQPSANSKPVEKLGVPAVGTGFTPPNKH SAPDSLKAKFSPQPQGQPPSKGEGGSPLPPREAPVKPAQELRTLATCAAGPRGDAALQAPPGAP PTLHSIQQEPAAAEGQEKRLDILSIFKYIPKDFATLYQGWGVSSPGPEHRGTPRTQARQGDFVC VECGKSFHQPSQLRAHLRAHTGERPHCPRDCAGRAPPKGDLETHLQHPARDSVDCGLTGDWKAP SSDHGHFGEEDPRSPDQTP hide sequence

RefSeq Acc Id:	XP_017456360 ⟸ XM_017600871
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K242 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDRSREAEMELRRGPSPPRAGRSHEVDGDKAACHSCCICGKSFPFQSSLSQHMRKHTGEKPYKC PYCDHRASQKGNLKIHIRSHRTGTLIQGHEPEVGEAQLGELRVSEGLDGCASPTKSTSACNRVL NGAVPTDGSKILLRSSRKEAEGAASAQEDAEAMVQCSFCKSRFERKKDLELHVHQAHKPFKCRL CSYVTLREESLLSHIERDHITAQVPNGSEACVENGKPELSPGEFPCEVCGQAFSQTWFLKAHMK KHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPKSDLDPIATINNVVQEEVIVTGLS LYEICTKCGNLFTDLDSLNAHNTVHRKVEASRNPAPAEEGDTEDPPDTKQFFLQCLNLTPCVAG DVSPSGQAGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYGTWDEALAGDVAFDKDKREYILV SQEKRKRESDAPSTQAPPRKRASVPGDPMLSGHLDPRPASRPNRRAAATTGQGKSSECFECGKI FRTYHQMVLHSRVHRRARRDRDPEGDRAVRARCGSLSEGDSASQPSSPGSACATADSPGLAEEV VDDSGEEAVSEPASGGQPGHCCSSGEVAPILLSNGDPSHKLGNNLPEEDISEPTVGIATPSVSI LENSSRETTKGPEQHRHSLDLKMPAFHPRQEASTPERVDFPSSMEIASLQHTLDSQAGHSKEKL SDLHKEHCGVGKRASAPDLVPLDLSMKSSREDPSSKEASSLQTALVIHPCPYCNHKTYYPEVLW MHKRIWHRISCGSIAPPWTQPSGHKSICSNLAFLARSGRTGPPPALGGKDCQPLLLARFTRTQV PGGVPGSKGSSSPLGVTTKAASIPKNKESPSGGPCAPWAPGPDGYRQTRAGHGQDPPSAAVQGP LPKPKQEASSRLAPSPGSGGLSRSATPTPSVITRVGAQPSANSKPVEKLGVPAVGTGFTPPNKH SAPDSLKAKFSPQPQGQPPSKGEGGSPLPPREAPVKPAQELRTLATCAAGPRGDAALQAPPGAP PTLHSIQQEPAAAEGQEKRLDILSIFKYIPKDFATLYQGWGVSSPGPEHRGTPRTQARQGDFVC VECGKSFHQPSQLRAHLRAHTGERPHCPRDCAGRAPPKGDLETHLQHPARDSVDCGLTGDWKAP SSDHGHFGEEDPRSPDQTP hide sequence

RefSeq Acc Id:

ENSRNOP00000021768 ⟸ ENSRNOT00000021768

RefSeq Acc Id:

ENSRNOP00000072097 ⟸ ENSRNOT00000088484

RefSeq Acc Id:	XP_038952554 ⟸ XM_039096626
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K242 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038952555 ⟸ XM_039096627
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K242 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001399386 ⟸ NM_001412457
- Peptide Label:	isoform 2
- UniProtKB:	A0A0G2K242 (UniProtKB/TrEMBL)

Protein Domains

C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K242-F1-model_v2	AlphaFold	A0A0G2K242	1-1171	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306817	AgrOrtholog
BioCyc Gene	G2FUF-6770	BioCyc
Ensembl Genes	ENSRNOG00000016258	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000021768	ENTREZGENE
	ENSRNOP00000021768.6	UniProtKB/TrEMBL
	ENSRNOP00000072097.2	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000021768	ENTREZGENE
	ENSRNOT00000021768.7	UniProtKB/TrEMBL
	ENSRNOT00000088484.2	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
KEGG Report	rno:291406	UniProtKB/TrEMBL
NCBI Gene	291406	ENTREZGENE
PANTHER	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN 516	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
	zf-H2C2_5	UniProtKB/TrEMBL
PhenoGen	Zfp516	PhenoGen
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A0G2K242	ENTREZGENE, UniProtKB/TrEMBL
	A6K5K2	ENTREZGENE, UniProtKB/TrEMBL
	D4A239	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-07-19	Zfp516	zinc finger protein 516	Znf516	zinc finger protein 516	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-25	Znf516	zinc finger protein 516	Zfp516	zinc finger protein 516	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-07	Zfp516	zinc finger protein 516	RGD1306817_predicted	similar to Hypothetical zinc finger protein KIAA0222 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1306817_predicted	similar to Hypothetical zinc finger protein KIAA0222 (predicted)	LOC291406_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC291406_predicted	similar to Hypothetical zinc finger protein KIAA0222 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

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InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

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Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar